Taylor
BigY2: 534577MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 534577 |
---|---|---|---|---|---|---|---|---|
6327399-G-A | 6459358-G-A | IR3_Dst | A* | |||||
19848997-C-T | 17737117-C-T | P5_Prx | A* | |||||
20762277-C-T | 18600391-C-T | P4_Prx | A* | |||||
24349076-T-C | 22202929-T-C | P3_t1 | A* | |||||
6867104-C-T | 6999063-C-T | BY61840 | Y | Y | + | |||
6875555-G-A | 7007514-G-A | BY61909 | Y | Y | + | |||
6891108-T-C | 7023067-T-C | BY62009 | Y | Y | + | |||
6960657-GCTCT-G | 7092616-GCTCT-G | + | ||||||
7085048-GCTGA-G | 7217007-GCTGA-G | + | ||||||
7604727-C-T | 7736686-C-T | BY66222 | Y | Y | + | |||
8633991-A-G | 8765950-A-G | BY74770 | Y | Y | + | |||
9777822-G-A | 9940213-G-A | Y19222 | Y | + | ||||
13715457-A-T | 11559781-A-T | BY89653 | + | |||||
14222191-A-T | 12101485-A-T | BY94034 | Y | Y | + | |||
14500563-G-A | 12388768-G-A | BY96191 | Y | Y | + | |||
14612005-C-T | 12500211-C-T | BY96802 | Y | Y | + | |||
15108435-A-G | 12996522-A-G | BY99741 | Y | Y | + | |||
15350885-C-T | 13239004-C-T | Z38298 | Y | Y | + | |||
15604801-A-G | 13492921-A-G | BY102817 | Y | Y | + | |||
15660822-G-A | 13548942-G-A | BY103172 | Y | Y | + | |||
16804044-G-T | 14692164-G-T | Y | Y | + | ||||
17053832-A-G | 14941952-A-G | BY112053 | Y | Y | + | |||
17057647-TC-T | 14945767-TC-T | + | ||||||
17101044-C-T | 14989164-C-T | BY112285 | Y | Y | + | |||
17458759-G-T | 15346879-G-T | BY114935 | Y | Y | + | |||
17711601-C-A | 15599721-C-A | BY116857 | Y | Y | + | |||
17804129-A-T | 15692249-A-T | BY117505 | Y | Y | + | |||
17905663-A-C | 15793783-A-C | BY118295 | Y | Y | + | |||
18206912-A-T | 16095032-A-T | BY120853 | Y | Y | + | |||
18390312-G-T | 16278432-G-T | BY121593 | P6_Gap | + | ||||
18821790-T-G | 16709910-T-G | BY124097 | Y | Y | + | |||
21189441-G-A | 19027555-G-A | BY130981 | Y | Y | + | |||
21331701-T-C | 19169815-T-C | BY132164 | Y | Y | + | |||
21453622-G-A | 19291736-G-A | BY133023 | Y | Y | + | |||
22507090-T-A | 20345204-T-A | BY158985 | DYZ19 | + | ||||
23743341-C-G | 21581455-C-G | BY147295 | + | |||||
16313-G-T | + | |||||||
13689219-T-G | 11533543-T-G | BY160766 | * | |||||
22316653-A-G | 20154767-A-G | DYZ19 | * | |||||
23415340-A-T | 21253454-A-T | ** | ||||||
9030205-A-G | 9192596-A-G | Z22680 | ** | |||||
14079908-A-T | 11959202-A-T | ** | ||||||
15530115-G-T | 13418235-G-T | ** | ||||||
19318270-A-C | 17206390-A-C | CTS10187 | ** | |||||
19983465-A-T | 17871585-A-T | P5_Prx | ** | |||||
2888731-T-C | 3020690-T-C | ZS435 | ZS435 | ** | ||||
17713835-C-A | 15601955-C-A | ** | ||||||
10656995-G-T | ** | |||||||
7309173-C-A | 7441132-C-A | ** | ||||||
13216667-C-A | 11060991-C-A | ** | ||||||
23475529-C-A | 21313643-C-A | ** | ||||||
11015159-C-A | ** | |||||||
11015160-C-T | ** | |||||||
23188285-C-A | 21026399-C-A | ** | ||||||
11009880-C-A | ** | |||||||
17548678-C-A | 15436798-C-A | ** | ||||||
10828258-GTTCCA-G | ** | |||||||
11018155-C-A | ** | |||||||
14735272-C-A | 12623340-C-A | ** | ||||||
11004430-C-G | ** | |||||||
16297379-G-T | 14185499-G-T | ** | ||||||
10825315-C-A | ** | |||||||
18614437-C-CA | 16502557-C-CA | 9×A | ** | |||||
28798266-G-T | 26652119-G-T | ** | ||||||
2856555-C-A | 2988514-C-A | ** | ||||||
14743699-C-A | 12631768-C-A | ** | ||||||
11027278-C-A | ** | |||||||
7080933-C-A | 7212892-C-A | ** | ||||||
10958825-C-G | ** | |||||||
4503083-G-T | 4635042-G-T | ** | ||||||
9822941-C-A | 9985332-C-A | ** | ||||||
16351586-C-A | 14239706-C-A | ** | ||||||
2856638-C-A | 2988597-C-A | ** | ||||||
2884140-A-T | 3016099-A-T | ** | ||||||
2950214-C-A | 3082173-C-A | ** | ||||||
2970843-C-A | 3102802-C-A | ** | ||||||
2986362-C-A | 3118321-C-A | ** | ||||||
3012607-A-G | 3144566-A-G | ** | ||||||
3038808-G-T | 3170767-G-T | ** | ||||||
3038975-G-T | 3170934-G-T | ** | ||||||
3347538-G-T | 3479497-G-T | ** | ||||||
3453891-T-A | 3585850-T-A | ** | ||||||
3523391-G-T | 3655350-G-T | ** | ||||||
3523481-T-G | 3655440-T-G | ** | ||||||
3545925-A-G | 3677884-A-G | ** | ||||||
3696627-A-G | 3828586-A-G | ** | ||||||
3879221-A-C | 4011180-A-C | ** | ||||||
4010013-G-T | 4141972-G-T | ** | ||||||
4087798-C-A | 4219757-C-A | ** | ||||||
4213314-A-C | 4345273-A-C | ** | ||||||
4229428-A-T | 4361387-A-T | ** | ||||||
4281476-A-G | 4413435-A-G | ** | ||||||
4331296-T-G | 4463255-T-G | ** | ||||||
4365937-A-T | 4497896-A-T | ** | ||||||
4365970-A-T | 4497929-A-T | ** | ||||||
4365974-A-T | 4497933-A-T | ** | ||||||
4733712-G-T | 4865671-G-T | ** | ||||||
4830975-C-A | 4962934-C-A | ** | ||||||
4861912-C-A | 4993871-C-A | ** | ||||||
4862655-G-A | 4994614-G-A | 10×A | ** | |||||
4930541-C-A | 5062500-C-A | ** | ||||||
4946515-G-T | 5078474-G-T | ** | ||||||
4946603-G-T | 5078562-G-T | ** | ||||||
4995334-C-T | 5127293-C-T | ** | ||||||
4995996-A-T | 5127955-A-T | ** | ||||||
5180629-A-T | 5312588-A-T | ** | ||||||
5189528-A-C | 5321487-A-C | ** | ||||||
5214479-C-T | 5346438-C-T | ** | ||||||
5319343-G-A | 5451302-G-A | ** | ||||||
5514350-G-T | 5646309-G-T | ** | ||||||
5602727-C-A | 5734686-C-A | ** | ||||||
5629950-T-G | 5761909-T-G | ** | ||||||
5671323-G-T | 5803282-G-T | ** | ||||||
5685123-G-A | 5817082-G-A | ** | ||||||
5739862-G-T | 5871821-G-T | ** | ||||||
5926893-A-C | 6058852-A-C | ** | ||||||
6083723-T-C | 6215682-T-C | ** | ||||||
6093068-C-A | 6225027-C-A | ** | ||||||
6128847-T-C | 6260806-T-C | ** | ||||||
6129738-T-A | 6261697-T-A | ** | ||||||
6129739-C-A | 6261698-C-A | ** | ||||||
6129753-T-C | 6261712-T-C | ** | ||||||
6129760-A-T | 6261719-A-T | ** | ||||||
6129763-TG-T | 6261722-TG-T | ** | ||||||
6279421-G-T | 6411380-G-T | IR3_Dst | ** | |||||
6347828-G-T | 6479787-G-T | ** | ||||||
6375594-G-T | 6507553-G-T | ** | ||||||
6419081-TGC-T | 6551040-TGC-T | ** | ||||||
6458301-C-A | 6590260-C-A | ** | ||||||
6491950-C-A | 6623909-C-A | ** | ||||||
6511400-C-A | 6643359-C-A | ** | ||||||
6626701-T-A | 6758660-T-A | ** | ||||||
6664071-A-C | 6796030-A-C | ** | ||||||
6692876-C-A | 6824835-C-A | ** | ||||||
6699080-G-C | 6831039-G-C | ** | ||||||
6772296-C-A | 6904255-C-A | ** | ||||||
6776308-C-A | 6908267-C-A | ** | ||||||
6798792-A-T | 6930751-A-T | ** | ||||||
6916378-C-A | 7048337-C-A | ** | ||||||
6919783-G-T | 7051742-G-T | ** | ||||||
6929402-C-A | 7061361-C-A | ** | ||||||
7084543-C-A | 7216502-C-A | ** | ||||||
7093193-A-G | 7225152-A-G | ** | ||||||
7107156-C-A | 7239115-C-A | ** | ||||||
7109394-C-A | 7241353-C-A | ** | ||||||
7115957-A-T | 7247916-A-T | ** | ||||||
7167067-C-A | 7299026-C-A | ** | ||||||
7196434-G-T | 7328393-G-T | ** | ||||||
7201473-A-C | 7333432-A-C | ** | ||||||
7201506-A-C | 7333465-A-C | ** | ||||||
7285251-C-A | 7417210-C-A | ** | ||||||
7332717-C-A | 7464676-C-A | ** | ||||||
7364016-C-A | 7495975-C-A | ** | ||||||
7430556-A-T | 7562515-A-T | ** | ||||||
7443988-G-T | 7575947-G-T | ** | ||||||
7775021-A-G | 7906980-A-G | ** | ||||||
7886506-C-A | 8018465-C-A | FT195587 | ** | |||||
7939301-TA-T | 8071260-TA-T | ** | ||||||
7939309-A-G | 8071268-A-G | ** | ||||||
8481872-T-C | 8613831-T-C | ** | ||||||
8671689-C-A | 8803648-C-A | ** | ||||||
8671819-T-G | 8803778-T-G | ** | ||||||
8786867-C-A | 8918826-C-A | ** | ||||||
8807470-A-C | 8939429-A-C | ** | ||||||
8911758-A-T | 9043717-A-T | ** | ||||||
8911776-G-T | 9043735-G-T | ** | ||||||
8982707-G-T | 9145098-G-T | ** | ||||||
9030192-A-T | 9192583-A-T | ** | ||||||
9030197-G-A | 9192588-G-A | ** | ||||||
9030204-C-T | 9192595-C-T | ** | ||||||
9416993-C-A | 9579384-C-A | ** | ||||||
9440436-T-A | 9602827-T-A | ** | ||||||
9482162-C-A | 9644553-C-A | ** | ||||||
9716809-A-AC | 9879200-A-AC | IR3_Prx | ** | |||||
9826100-A-C | 9988491-A-C | ** | ||||||
9955378-C-A | 10117769-C-A | ** | ||||||
10013817-GCA-G | 10176208-GCA-G | ** | ||||||
10050191-T-A | 10212582-T-A | ** | ||||||
10657042-T-G | ** | |||||||
10663283-C-A | ** | |||||||
10679453-C-A | ** | |||||||
10686115-T-A | ** | |||||||
10691912-C-A | ** | |||||||
10693400-C-A | ** | |||||||
10744543-C-A | ** | |||||||
10746683-C-A | ** | |||||||
10748059-T-A | ** | |||||||
10750317-C-T | ** | |||||||
10753536-C-G | ** | |||||||
10756700-A-G | ** | |||||||
10756707-T-C | ** | |||||||
10767639-ACCACTCCAGTCTATTCCATTCCATT-A | ** | |||||||
10773543-T-G | ** | |||||||
10773607-T-G | ** | |||||||
10773797-C-G | ** | |||||||
10773812-C-G | ** | |||||||
10773867-T-G | ** | |||||||
10773871-A-C | ** | |||||||
10781431-C-A | ** | |||||||
10788955-G-T | ** | |||||||
10792602-C-G | ** | |||||||
10792603-C-A | ** | |||||||
10792610-C-A | ** | |||||||
10792615-T-C | ** | |||||||
10792622-C-G | ** | |||||||
10792626-C-T | ** | |||||||
10794135-C-A | ** | |||||||
10795809-G-T | ** | |||||||
10796671-C-CCCCTG | ** | |||||||
10796673-A-AGTCGGGTTGT | ** | |||||||
10796693-A-C | ** | |||||||
10797573-A-C | ** | |||||||
10802183-CT-C | ** | |||||||
10820594-C-T | ** | |||||||
10822468-T-G | ** | |||||||
10828144-T-C | ** | |||||||
10846808-A-G | ** | |||||||
10849842-T-G | ** | |||||||
10864586-C-A | ** | |||||||
10865758-C-A | ** | |||||||
10866469-C-T | ** | |||||||
10895845-C-CCTCTT | ** | |||||||
10895870-C-CAATTG | ** | |||||||
10925030-C-T | ** | |||||||
10925033-C-CTTTCT | ** | |||||||
10925464-C-A | ** | |||||||
10929484-C-A | ** | |||||||
10930226-T-A | ** | |||||||
10930228-T-A | ** | |||||||
10937411-A-C | ** | |||||||
10937411-A-ATTCAATGCCT | ** | |||||||
10942440-T-C | ** | |||||||
10942446-TC-T | ** | |||||||
10944345-C-A | ** | |||||||
10948606-C-A | ** | |||||||
10949413-T-A | ** | |||||||
10949418-C-A | ** | |||||||
10949443-C-A | ** | |||||||
10958542-A-T | ** | |||||||
10967523-C-T | ** | |||||||
10967527-C-CGGGTA | ** | |||||||
10975430-C-T | FTB20511 | ** | ||||||
10982449-T-A | ** | |||||||
10982478-T-A | ** | |||||||
10982531-C-T | ** | |||||||
11001592-T-A | ** | |||||||
11001595-AATC-A | ** | |||||||
11001600-ATT-A | ** | |||||||
11003578-T-G | ** | |||||||
11004399-C-G | ** | |||||||
11005485-C-A | ** | |||||||
11007915-C-A | ** | |||||||
11014663-C-A | ** | |||||||
11020391-T-G | FT219078 | ** | ||||||
11024885-A-G | ** | |||||||
11027284-T-A | ** | |||||||
11027289-T-A | ** | |||||||
11034096-C-A | ** | |||||||
11036116-A-T | ** | |||||||
13196005-T-G | 11040329-T-G | ** | ||||||
13218086-C-A | 11062410-C-A | ** | ||||||
13273142-C-A | 11117466-C-A | ** | ||||||
13305628-C-A | 11149952-C-A | ** | ||||||
13468157-T-G | 11312481-T-G | ** | ||||||
13634390-G-C | 11478714-G-C | ** | ||||||
13642231-C-A | 11486555-C-A | ** | ||||||
13686867-C-T | 11531191-C-T | BY88463 | ** | |||||
13698932-G-A | 11543256-G-A | ** | ||||||
11648599-G-T | ** | |||||||
11649513-G-T | ** | |||||||
11649518-A-T | ** | |||||||
11649529-C-A | ** | |||||||
11666581-C-A | ** | |||||||
11669371-G-T | ** | |||||||
13798673-G-T | 11677967-G-T | ** | ||||||
13859525-G-T | 11738819-G-T | ** | ||||||
13880891-C-A | 11760185-C-A | ** | ||||||
13963390-A-C | 11842684-A-C | ** | ||||||
13976097-AAG-A | 11855391-AAG-A | ** | ||||||
14050561-A-T | 11929855-A-T | ** | ||||||
14089858-C-A | 11969152-C-A | FT186303 | ** | |||||
14142442-G-T | 12021736-G-T | ** | ||||||
14159660-A-T | 12038954-A-T | ** | ||||||
14241310-C-A | 12120604-C-A | ** | ||||||
14270481-C-A | 12149775-C-A | ** | ||||||
14283465-T-G | 12162759-T-G | ** | ||||||
14283995-A-T | 12163289-A-T | ** | ||||||
14424010-C-A | 12303285-C-A | ** | ||||||
14450430-A-G | 12329703-A-G | ** | ||||||
14505448-T-C | 12393653-T-C | ** | ||||||
14560559-G-T | 12448760-G-T | ** | ||||||
14570106-A-T | 12458306-A-T | ** | ||||||
14584627-T-A | 12472827-T-A | ** | ||||||
14611503-A-T | 12499709-A-T | ** | ||||||
14649480-C-A | 12537545-C-A | ** | ||||||
14661504-C-A | 12549569-C-A | ** | ||||||
14697084-A-C | 12585150-A-C | ** | ||||||
14786567-T-A | 12674637-T-A | ** | ||||||
14795192-T-A | 12683263-T-A | ** | ||||||
14797568-T-C | 12685639-T-C | ** | ||||||
14797641-C-A | 12685712-C-A | ** | ||||||
14798675-C-G | 12686746-C-G | ** | ||||||
14986096-C-A | 12874164-C-A | ** | ||||||
15012432-A-T | 12900520-A-T | ** | ||||||
15066067-C-T | 12954159-C-T | ** | ||||||
15114755-C-A | 13002842-C-A | ** | ||||||
15128093-A-C | 13016180-A-C | ** | ||||||
15189617-C-A | 13077703-C-A | ** | ||||||
15352821-C-A | 13240940-C-A | ** | ||||||
15364661-C-G | 13252781-C-G | ** | ||||||
15442636-T-G | 13330756-T-G | ** | ||||||
15452430-C-A | 13340550-C-A | ** | ||||||
15541753-T-A | 13429873-T-A | ** | ||||||
15605685-T-A | 13493805-T-A | ** | ||||||
15636191-G-A | 13524311-G-A | FGC54748 | ** | |||||
15670221-A-C | 13558341-A-C | ** | ||||||
15683686-C-A | 13571806-C-A | ** | ||||||
15701100-C-A | 13589220-C-A | ** | ||||||
15735400-A-T | 13623520-A-T | ** | ||||||
15777188-A-T | 13665308-A-T | ** | ||||||
15832217-T-A | 13720337-T-A | ** | ||||||
15870610-C-G | 13758730-C-G | ** | ||||||
15919644-G-A | 13807764-G-A | ** | ||||||
15995478-C-A | 13883598-C-A | ** | ||||||
16001255-C-A | 13889375-C-A | ** | ||||||
16017743-C-A | 13905863-C-A | ** | ||||||
16048564-G-C | 13936684-G-C | ** | ||||||
16048565-T-C | 13936685-T-C | ** | ||||||
16048573-G-T | 13936693-G-T | ** | ||||||
16054123-A-G | 13942243-A-G | ** | ||||||
16056058-C-A | 13944178-C-A | ** | ||||||
16181025-C-A | 14069145-C-A | ** | ||||||
16272879-A-T | 14160999-A-T | ** | ||||||
16272882-A-T | 14161002-A-T | ** | ||||||
16412322-G-T | 14300442-G-T | ** | ||||||
16503615-C-A | 14391735-C-A | ** | ||||||
16539597-C-A | 14427717-C-A | ** | ||||||
16620519-C-A | 14508639-C-A | ** | ||||||
16621435-C-A | 14509555-C-A | FTA28420 | ** | |||||
16640297-A-C | 14528417-A-C | ** | ||||||
16887018-C-A | 14775138-C-A | ** | ||||||
16926218-C-A | 14814338-C-A | ** | ||||||
16938397-T-G | 14826517-T-G | ** | ||||||
16944888-C-A | 14833008-C-A | ** | ||||||
17130005-A-C | 15018125-A-C | ** | ||||||
17167886-C-A | 15056006-C-A | ** | ||||||
17217393-T-A | 15105513-T-A | ** | ||||||
17250952-A-C | 15139072-A-C | ** | ||||||
17270473-C-A | 15158593-C-A | ** | ||||||
17306708-C-A | 15194828-C-A | FT87018 | ** | |||||
17378958-C-A | 15267078-C-A | FT274496 | ** | |||||
17480092-T-A | 15368212-T-A | ** | ||||||
17571912-T-G | 15460032-T-G | ** | ||||||
17728670-A-C | 15616790-A-C | FTB37337 | ** | |||||
17775105-T-A | 15663225-T-A | ** | ||||||
17859940-T-G | 15748060-T-G | ** | ||||||
17871890-C-G | 15760010-C-G | ** | ||||||
17927996-A-T | 15816116-A-T | ** | ||||||
18039349-A-T | 15927469-A-T | ** | ||||||
18040447-C-A | 15928567-C-A | ** | ||||||
18086268-T-G | 15974388-T-G | ** | ||||||
18089378-A-C | 15977498-A-C | ** | ||||||
18196330-A-T | 16084450-A-T | ** | ||||||
18201178-A-C | 16089298-A-C | ** | ||||||
18210968-C-A | 16099088-C-A | ** | ||||||
18401037-C-A | 16289157-C-A | P6_Gap | ** | |||||
18420366-GA-G | 16308486-GA-G | P6_Gap | 9×A | ** | ||||
18630946-C-G | 16519066-C-G | ** | ||||||
18701846-T-A | 16589966-T-A | ** | ||||||
18749448-A-C | 16637568-A-C | ** | ||||||
18961461-C-A | 16849581-C-A | ** | ||||||
18965061-T-A | 16853181-T-A | ** | ||||||
18972850-C-G | 16860970-C-G | ** | ||||||
18981284-G-A | 16869404-G-A | FT68584 | ** | |||||
19014152-G-T | 16902272-G-T | ** | ||||||
19083414-T-C | 16971534-T-C | ** | ||||||
19131551-C-T | 17019671-C-T | FT181694 | ** | |||||
19253145-C-A | 17141265-C-A | ** | ||||||
19410144-C-A | 17298264-C-A | FT199439 | ** | |||||
19429685-C-A | 17317805-C-A | ** | ||||||
19546304-A-G | 17434424-A-G | ** | ||||||
19558359-G-A | 17446479-G-A | ** | ||||||
19582298-G-T | 17470418-G-T | P5_Prx | ** | |||||
19675473-C-A | 17563593-C-A | P5_Prx | ** | |||||
19675534-C-A | 17563654-C-A | P5_Prx | ** | |||||
19983413-A-T | 17871533-A-T | P5_Prx | ** | |||||
19983419-A-T | 17871539-A-T | P5_Prx | ** | |||||
19983461-A-T | 17871581-A-T | P5_Prx | ** | |||||
20404472-AAAG-A | 18242586-AAAG-A | P5_Dst | ** | |||||
20440392-T-G | 18278506-T-G | P5_Dst | 13×TTG | ** | ||||
20478217-T-G | 18316331-T-G | P5_Dst | ** | |||||
20557699-T-G | 18395813-T-G | P5_Dst | ** | |||||
20685327-A-T | 18523441-A-T | P4_Prx | ** | |||||
20869219-A-C | 18707333-A-C | P4_Dst | ** | |||||
21153432-A-T | 18991546-A-T | ** | ||||||
21187944-C-T | 19026058-C-T | FT68746 | ** | |||||
21324295-T-G | 19162409-T-G | ** | ||||||
21352816-T-A | 19190930-T-A | ** | ||||||
21352831-T-A | 19190945-T-A | ** | ||||||
21352838-G-T | 19190952-G-T | ** | ||||||
21361948-A-T | 19200062-A-T | ** | ||||||
21394713-C-A | 19232827-C-A | ** | ||||||
21488640-C-T | 19326754-C-T | ** | ||||||
21491105-C-A | 19329219-C-A | ** | ||||||
21512324-G-T | 19350438-G-T | ** | ||||||
21709248-C-G | 19547362-C-G | ** | ||||||
21853623-C-A | 19691737-C-A | ** | ||||||
21888365-A-C | 19726479-A-C | ** | ||||||
21935120-T-C | 19773234-T-C | FTA32866 | ** | |||||
21956650-C-A | 19794764-C-A | ** | ||||||
21991508-T-A | 19829622-T-A | ** | ||||||
22001342-A-C | 19839456-A-C | ** | ||||||
22078048-C-A | 19916162-C-A | ** | ||||||
22167894-C-A | 20006008-C-A | ** | ||||||
22300701-G-C | 20138815-G-C | DYZ19 | ** | |||||
22536420-T-A | 20374534-T-A | ** | ||||||
22614211-C-A | 20452325-C-A | ** | ||||||
22634782-C-A | 20472896-C-A | ** | ||||||
22713025-C-A | 20551139-C-A | ** | ||||||
22729421-C-A | 20567535-C-A | ** | ||||||
23068450-G-T | 20906564-G-T | ** | ||||||
23120000-T-G | 20958114-T-G | ** | ||||||
23127630-A-C | 20965744-A-C | ** | ||||||
23145984-T-G | 20984098-T-G | ** | ||||||
23248396-C-A | 21086510-C-A | BY158837 | ** | |||||
23315957-C-A | 21154071-C-A | ** | ||||||
23361068-C-A | 21199182-C-A | ** | ||||||
23875237-G-T | 21713351-G-T | ** | ||||||
23875426-C-A | 21713540-C-A | ** | ||||||
24205583-A-C | 22059436-A-C | P3_b1 | ** | |||||
24212285-C-A | 22066138-C-A | P3_b1 | ** | |||||
24296299-G-A | 22150152-G-A | P3_t1 | ** | |||||
24301090-T-A | 22154943-T-A | P3_t1 | ** | |||||
24363861-C-A | 22217714-C-A | ** | ||||||
24381346-C-A | 22235199-C-A | ** | ||||||
24381477-C-A | 22235330-C-A | ** | ||||||
24600578-G-C | 22454431-G-C | P3_t2 | ** | |||||
25586883-G-T | 23440736-G-T | P1_gr1 | ** | |||||
25885894-G-T | 23739747-G-T | P1_Y1 | ** | |||||
25995055-AC-A | 23848908-AC-A | P1_Y1 | ** | |||||
26010374-G-T | 23864227-G-T | P1_Y1 | ** | |||||
26079252-C-A | 23933105-C-A | P1_Y1 | ** | |||||
26079281-A-T | 23933134-A-T | P1_Y1 | ** | |||||
26097474-T-A | 23951327-T-A | P1_Y1 | ** | |||||
26699359-T-G | 24553212-T-G | P1_g2 | ** | |||||
27127757-T-C | 24981610-T-C | P1_g3 | ** | |||||
27647546-T-A | 25501399-T-A | P1_Y2 | ** | |||||
27647579-A-C | 25501432-A-C | P1_Y2 | ** | |||||
27647656-G-T | 25501509-G-T | P1_Y2 | ** | |||||
27713602-G-T | 25567455-G-T | P1_Y2 | ** | |||||
27778088-A-T | 25631941-A-T | P1_Y2 | ** | |||||
27778165-T-TA | 25632018-T-TA | P1_Y2 | ** | |||||
27778184-C-A | 25632037-C-A | P1_Y2 | ** | |||||
27916405-A-T | 25770258-A-T | P1_Y2 | ** | |||||
27952091-GTATATATATATATA-G | 25805944-GTATATATATATATA-G | P1_Y2 | 19×TA | ** | ||||
28438167-G-T | 26292020-G-T | P1_gr2 | ** | |||||
28461073-C-A | 26314926-C-A | ** | ||||||
28469524-CTTT-C | 26323377-CTTT-C | 12×T | ** | |||||
28499274-G-C | 26353127-G-C | ** | ||||||
28546604-G-T | 26400457-G-T | ** | ||||||
28567263-A-T | 26421116-A-T | ** | ||||||
28583945-C-A | 26437798-C-A | ** | ||||||
28605873-C-A | 26459726-C-A | ** | ||||||
28658416-C-A | 26512269-C-A | ** | ||||||
28798244-A-T | 26652097-A-T | ** | ||||||
28798249-A-T | 26652102-A-T | ** | ||||||
28798257-A-T | 26652110-A-T | ** | ||||||
28798264-A-C | 26652117-A-C | ** | ||||||
28798272-A-T | 26652125-A-T | ** | ||||||
28808658-T-A | 26662511-T-A | ** | ||||||
56828064-A-T | ** | |||||||
56840998-C-A | ** | |||||||
7029-G-T | ** | |||||||
14193-G-T | ** | |||||||
13484466-C-A | 11328790-C-A | *** | ||||||
19286192-C-A | 17174312-C-A | *** | ||||||
10935504-G-A,C | *** | |||||||
7938161-GA-G,GAA | 8070120-GA-G,GAA | 15×A | *** | |||||
8468065-CAAAAA-C,CAA | 8600024-CAAAAA-C,CAA | 24×A | *** | |||||
8690703-C-A | 8822662-C-A | *** | ||||||
10772437-AT-A,AC | *** | |||||||
10887453-C-G | *** | |||||||
10887462-C-T | *** | |||||||
10887470-T-C | *** | |||||||
10887493-A-T | *** | |||||||
11005297-G-T | *** | |||||||
11653053-C-A | *** | |||||||
15380240-G-T | 13268360-G-T | *** | ||||||
15499444-T-A | 13387564-T-A | *** | ||||||
16003037-G-T | 13891157-G-T | *** | ||||||
16246059-G-T | 14134179-G-T | *** | ||||||
17673185-T-A | 15561305-T-A | *** | ||||||
19411048-G-A | 17299168-G-A | *** | ||||||
19492903-C-A | 17381023-C-A | *** | ||||||
20101693-A-AATAT | 17989813-A-AATAT | P5_Dst | 17×AT | *** | ||||
21091008-T-C | 18929122-T-C | FTB60949 | *** | |||||
21732762-G-A | 19570876-G-A | BY159100 | *** | |||||
22270734-C-T | 20108848-C-T | BY159026 | DYZ19 | *** | ||||
22270737-T-C | 20108851-T-C | BY215056 | DYZ19 | *** | ||||
22270739-T-C | 20108853-T-C | DYZ19 | *** | |||||
22275606-A-T | 20113720-A-T | DYZ19 | *** | |||||
22849571-G-A | 20687685-G-A | *** | ||||||
23189865-GAAA-G,GAA | 21027979-GAAA-G,GAA | 13×A | *** | |||||
24424323-T-C | 22278176-T-C | *** | ||||||
56833308-TGC-T,TTC | *** | |||||||
56843943-G-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.