Tree Position

R-U106/S21 > Z2265 > BY30097 > Z381/S263 > S264/Z156 > Z305 > Z307 > S265/Z304 > BY12480 > DF96 > FGC13326 > S22047 > FGC46344 > FGC68956 > Y87775 > FT37131 > Y108036 > Y88896 > PF7273

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRBigY2
677933
hg19:Y:15791622-GTA-G hg38:Y:13679742-GTA-G **
hg19:Y:17619633-C-A hg38:Y:15507753-C-A FT301681 **
hg19:Y:22171393-G-T hg38:Y:20009507-G-T **
hg19:Y:9731612-G-T hg38:Y:9894003-G-T IR3_Prx **
hg19:Y:20798732-C-A hg38:Y:18636846-C-A P4_Prx **
hg19:Y:22550053-G-A hg38:Y:20388167-G-A BY138891 **
hg19:Y:28791143-G-C hg38:Y:26644996-G-C **
hg19:Y:16904664-CAAA-C hg38:Y:14792784-CAAA-C 40×A**
hg19:Y:9731594-A-T hg38:Y:9893985-A-T IR3_Prx **
hg19:Y:13221865-A-C hg38:Y:11066189-A-C **
hg38:Y:10938373-A-T **
hg19:Y:7338750-C-A hg38:Y:7470709-C-A **
hg19:Y:23392241-T-G hg38:Y:21230355-T-G **
hg19:Y:7572891-C-T hg38:Y:7704850-C-T FT239100 **
hg19:Y:7138899-C-A hg38:Y:7270858-C-A **
hg19:Y:5242446-C-A hg38:Y:5374405-C-A **
hg38:Y:56835413-C-A **
hg19:Y:19749330-T-A hg38:Y:17637450-T-A P5_Prx **
hg19:Y:13708895-C-A hg38:Y:11553219-C-A DYZ17 **
hg38:Y:10852721-C-T **
hg19:Y:18089045-C-A hg38:Y:15977165-C-A **
hg38:Y:10984320-C-A **
hg19:Y:7280936-C-A hg38:Y:7412895-C-A **
hg38:Y:10684210-A-ATTCTT **
hg38:Y:11027380-C-A **
hg19:Y:8576000-T-A hg38:Y:8707959-T-A **
hg38:Y:10961210-CCATTT-C **
hg19:Y:2682840-A-C hg38:Y:2814799-A-C **
hg19:Y:2730082-C-A hg38:Y:2862041-C-A **
hg19:Y:2738773-T-A hg38:Y:2870732-T-A **
hg19:Y:2813802-C-A hg38:Y:2945761-C-A **
hg19:Y:2859653-C-A hg38:Y:2991612-C-A **
hg19:Y:2977561-C-A hg38:Y:3109520-C-A **
hg19:Y:2990559-A-T hg38:Y:3122518-A-T **
hg19:Y:3073825-T-A hg38:Y:3205784-T-A **
hg19:Y:3105724-C-A hg38:Y:3237683-C-A **
hg19:Y:3195264-G-T hg38:Y:3327223-G-T **
hg19:Y:3274706-C-A hg38:Y:3406665-C-A **
hg19:Y:3275287-G-T hg38:Y:3407246-G-T **
hg19:Y:3285060-T-G hg38:Y:3417019-T-G **
hg19:Y:3347531-C-A hg38:Y:3479490-C-A **
hg19:Y:3594019-A-C hg38:Y:3725978-A-C **
hg19:Y:3651439-A-C hg38:Y:3783398-A-C **
hg19:Y:3712105-C-A hg38:Y:3844064-C-A **
hg19:Y:3994818-T-A hg38:Y:4126777-T-A **
hg19:Y:4063230-T-A hg38:Y:4195189-T-A **
hg19:Y:4069494-G-T hg38:Y:4201453-G-T **
hg19:Y:4080926-T-A hg38:Y:4212885-T-A **
hg19:Y:4103683-A-C hg38:Y:4235642-A-C **
hg19:Y:4165392-C-A hg38:Y:4297351-C-A **
hg19:Y:4165402-G-T hg38:Y:4297361-G-T **
hg19:Y:4240356-T-G hg38:Y:4372315-T-G **
hg19:Y:4420747-A-C hg38:Y:4552706-A-C **
hg19:Y:4472436-C-A hg38:Y:4604395-C-A **
hg19:Y:4505176-T-A hg38:Y:4637135-T-A **
hg19:Y:4521630-G-T hg38:Y:4653589-G-T **
hg19:Y:4540520-A-T hg38:Y:4672479-A-T **
hg19:Y:4653978-A-G hg38:Y:4785937-A-G **
hg19:Y:4672219-T-G hg38:Y:4804178-T-G **
hg19:Y:4717704-G-T hg38:Y:4849663-G-T **
hg19:Y:4781100-A-C hg38:Y:4913059-A-C **
hg19:Y:4862831-G-T hg38:Y:4994790-G-T **
hg19:Y:4863283-G-T hg38:Y:4995242-G-T **
hg19:Y:4918382-C-A hg38:Y:5050341-C-A **
hg19:Y:5125541-A-C hg38:Y:5257500-A-C FT287520 **
hg19:Y:5125579-T-G hg38:Y:5257538-T-G **
hg19:Y:5191285-C-A hg38:Y:5323244-C-A **
hg19:Y:5200327-C-A hg38:Y:5332286-C-A **
hg19:Y:5393408-A-G hg38:Y:5525367-A-G **
hg19:Y:5586096-A-T hg38:Y:5718055-A-T **
hg19:Y:5824285-A-T hg38:Y:5956244-A-T **
hg19:Y:5845819-T-A hg38:Y:5977778-T-A **
hg19:Y:5967560-G-T hg38:Y:6099519-G-T **
hg19:Y:6010667-A-C hg38:Y:6142626-A-C **
hg19:Y:6147603-C-A hg38:Y:6279562-C-A IR3_Dst **
hg19:Y:6376670-A-T hg38:Y:6508629-A-T **
hg19:Y:6376692-T-A hg38:Y:6508651-T-A **
hg19:Y:6427425-A-C hg38:Y:6559384-A-C **
hg19:Y:6445127-C-A hg38:Y:6577086-C-A **
hg19:Y:6505507-T-G hg38:Y:6637466-T-G **
hg19:Y:6523686-T-G hg38:Y:6655645-T-G **
hg19:Y:6688712-T-G hg38:Y:6820671-T-G **
hg19:Y:6693142-T-A hg38:Y:6825101-T-A **
hg19:Y:6831904-C-A hg38:Y:6963863-C-A **
hg19:Y:6903772-A-C hg38:Y:7035731-A-C Y61172 **
hg19:Y:6977122-C-A hg38:Y:7109081-C-A **
hg19:Y:7012642-C-A hg38:Y:7144601-C-A **
hg19:Y:7013532-C-A hg38:Y:7145491-C-A **
hg19:Y:7043981-C-A hg38:Y:7175940-C-A **
hg19:Y:7123611-A-C hg38:Y:7255570-A-C **
hg19:Y:7140970-G-T hg38:Y:7272929-G-T **
hg19:Y:7143244-C-A hg38:Y:7275203-C-A **
hg19:Y:7143465-C-A hg38:Y:7275424-C-A **
hg19:Y:7158199-C-A hg38:Y:7290158-C-A **
hg19:Y:7170650-A-T hg38:Y:7302609-A-T **
hg19:Y:7180095-T-A hg38:Y:7312054-T-A **
hg19:Y:7217445-C-A hg38:Y:7349404-C-A **
hg19:Y:7217453-C-A hg38:Y:7349412-C-A **
hg19:Y:7224235-A-T hg38:Y:7356194-A-T **
hg19:Y:7228265-A-C hg38:Y:7360224-A-C **
hg19:Y:7235352-T-G hg38:Y:7367311-T-G **
hg19:Y:7238134-G-T hg38:Y:7370093-G-T **
hg19:Y:7238193-C-A hg38:Y:7370152-C-A **
hg19:Y:7239592-C-A hg38:Y:7371551-C-A **
hg19:Y:7239658-C-A hg38:Y:7371617-C-A **
hg19:Y:7269855-C-A hg38:Y:7401814-C-A **
hg19:Y:7295898-C-A hg38:Y:7427857-C-A **
hg19:Y:7331371-T-A hg38:Y:7463330-T-A **
hg19:Y:7362420-C-A hg38:Y:7494379-C-A **
hg19:Y:7387379-T-G hg38:Y:7519338-T-G **
hg19:Y:7397694-A-C hg38:Y:7529653-A-C **
hg19:Y:7572893-A-G hg38:Y:7704852-A-G **
hg19:Y:7608436-CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCCCTCTCTCTTT-C hg38:Y:7740395-CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCCCTCTCTCTTT-C 15×CT**
hg19:Y:7643006-A-C hg38:Y:7774965-A-C **
hg19:Y:7646638-A-G hg38:Y:7778597-A-G **
hg19:Y:7753688-G-T hg38:Y:7885647-G-T **
hg19:Y:7852429-A-T hg38:Y:7984388-A-T **
hg19:Y:7858393-A-C hg38:Y:7990352-A-C **
hg19:Y:7923666-T-G hg38:Y:8055625-T-G **
hg19:Y:8013475-A-C hg38:Y:8145434-A-C **
hg19:Y:8058656-C-A hg38:Y:8190615-C-A **
hg19:Y:8094669-T-G hg38:Y:8226628-T-G **
hg19:Y:8154084-T-G hg38:Y:8286043-T-G **
hg19:Y:8216546-A-C hg38:Y:8348505-A-C **
hg19:Y:8678036-C-A hg38:Y:8809995-C-A **
hg19:Y:8694194-G-T hg38:Y:8826153-G-T **
hg19:Y:8694249-G-C hg38:Y:8826208-G-C **
hg19:Y:8718940-C-A hg38:Y:8850899-C-A **
hg19:Y:8733122-G-A hg38:Y:8865081-G-A **
hg19:Y:8750616-G-T hg38:Y:8882575-G-T **
hg19:Y:8799695-T-A hg38:Y:8931654-T-A **
hg38:Y:9113886-C-G **
hg19:Y:9075895-T-G hg38:Y:9238286-T-G **
hg19:Y:9456648-C-A hg38:Y:9619039-C-A **
hg19:Y:9498899-A-T hg38:Y:9661290-A-T **
hg19:Y:9509284-G-T hg38:Y:9671675-G-T **
hg19:Y:9509319-G-T hg38:Y:9671710-G-T **
hg19:Y:9509840-A-T hg38:Y:9672231-A-T **
hg19:Y:9700811-A-C hg38:Y:9863202-A-C IR3_Prx **
hg19:Y:9731572-G-T hg38:Y:9893963-G-T IR3_Prx **
hg19:Y:9731582-C-A hg38:Y:9893973-C-A IR3_Prx **
hg19:Y:9731590-A-T hg38:Y:9893981-A-T IR3_Prx **
hg19:Y:9891135-A-T hg38:Y:10053526-A-T **
hg19:Y:9927492-C-A hg38:Y:10089883-C-A **
hg19:Y:9944049-T-C hg38:Y:10106440-T-C **
hg19:Y:9960068-A-T hg38:Y:10122459-A-T **
hg19:Y:9964333-C-A hg38:Y:10126724-C-A **
hg19:Y:9964456-C-T hg38:Y:10126847-C-T **
hg19:Y:10020554-A-C hg38:Y:10182945-A-C **
hg19:Y:10026438-T-A hg38:Y:10188829-T-A **
hg19:Y:10040697-A-C hg38:Y:10203088-A-C **
hg38:Y:10630418-TGCTAC-T **
hg38:Y:10630433-T-C **
hg38:Y:10630438-A-C **
hg38:Y:10663564-T-G **
hg38:Y:10666391-C-A FT428627 **
hg38:Y:10672950-T-A **
hg38:Y:10673725-C-A **
hg38:Y:10683187-C-A **
hg38:Y:10684188-C-T **
hg38:Y:10684223-C-A **
hg38:Y:10684231-C-A **
hg38:Y:10687317-C-A **
hg38:Y:10689458-G-T **
hg38:Y:10693375-A-AAACTCCACTC **
hg38:Y:10693383-C-CCTCCAT **
hg38:Y:10693645-C-A **
hg38:Y:10693985-CCATT-C **
hg38:Y:10747859-C-A **
hg38:Y:10750288-C-A **
hg38:Y:10754015-C-A **
hg38:Y:10756466-T-G **
hg38:Y:10758583-T-C FGC80790 **
hg38:Y:10758618-A-C **
hg38:Y:10761175-T-G **
hg38:Y:10763281-C-A **
hg38:Y:10763296-C-G **
hg38:Y:10763298-C-A **
hg38:Y:10766305-T-C **
hg38:Y:10768678-C-A **
hg38:Y:10768716-T-A **
hg38:Y:10776624-C-A **
hg38:Y:10787969-A-C **
hg38:Y:10788014-C-T **
hg38:Y:10788015-T-C **
hg38:Y:10788033-A-C **
hg38:Y:10788040-T-C **
hg38:Y:10791288-C-T FGC82604 **
hg38:Y:10794638-T-C **
hg38:Y:10794643-G-A **
hg38:Y:10794645-A-C **
hg38:Y:10796168-G-C **
hg38:Y:10803848-T-G **
hg38:Y:10803882-A-C **
hg38:Y:10805453-C-A **
hg38:Y:10805464-C-A **
hg38:Y:10811848-A-T **
hg38:Y:10813215-G-A **
hg38:Y:10813568-A-T **
hg38:Y:10813583-A-T **
hg38:Y:10817422-C-A **
hg38:Y:10820431-T-C **
hg38:Y:10828986-T-G **
hg38:Y:10829273-A-T **
hg38:Y:10831617-A-T **
hg38:Y:10832008-T-G **
hg38:Y:10839066-A-G **
hg38:Y:10839929-C-CTCCAT **
hg38:Y:10840076-G-T **
hg38:Y:10841796-A-C **
hg38:Y:10841812-C-T **
hg38:Y:10841818-T-C **
hg38:Y:10851938-A-T **
hg38:Y:10851942-C-A **
hg38:Y:10852722-T-A **
hg38:Y:10852729-C-A **
hg38:Y:10852753-C-G **
hg38:Y:10857204-A-T **
hg38:Y:10857367-C-A **
hg38:Y:10858321-T-A **
hg38:Y:10858332-C-A **
hg38:Y:10865195-T-A **
hg38:Y:10869943-A-G **
hg38:Y:10869949-T-C **
hg38:Y:10877361-TTCATTGCATTCTACT-C **
hg38:Y:10877385-C-T FT435136 **
hg38:Y:10883121-T-A **
hg38:Y:10892558-C-CCCTCGGGTTT **
hg38:Y:10892565-T-TAG **
hg38:Y:10893889-T-G **
hg38:Y:10894859-C-T **
hg38:Y:10898359-A-T **
hg38:Y:10898731-A-T **
hg38:Y:10900682-T-G **
hg38:Y:10916253-A-G **
hg38:Y:10924232-C-A **
hg38:Y:10929591-C-A **
hg38:Y:10932026-C-A **
hg38:Y:10932045-C-A **
hg38:Y:10935344-A-T **
hg38:Y:10938354-T-G **
hg38:Y:10946801-C-A **
hg38:Y:10952557-T-G **
hg38:Y:10958810-C-A **
hg38:Y:10964727-C-A **
hg38:Y:10968377-G-T **
hg38:Y:10972166-T-G **
hg38:Y:10972830-T-G **
hg38:Y:10972843-C-T **
hg38:Y:10972844-T-A **
hg38:Y:10972858-C-A **
hg38:Y:10972882-A-C **
hg38:Y:10983775-T-G **
hg38:Y:10984138-C-A **
hg38:Y:10984265-T-A **
hg38:Y:10994143-T-G **
hg38:Y:10999875-A-C **
hg38:Y:11000465-T-G **
hg38:Y:11001905-C-G **
hg38:Y:11001915-T-G **
hg38:Y:11001924-A-C **
hg38:Y:11004921-T-G **
hg38:Y:11010774-G-T **
hg38:Y:11019498-T-G **
hg38:Y:11022090-C-A **
hg38:Y:11026003-C-G **
hg38:Y:11026013-C-T **
hg38:Y:11026016-T-C **
hg38:Y:11026019-A-T **
hg38:Y:11026021-T-G **
hg38:Y:11028156-ATTCCA-G **
hg38:Y:11028176-A-C **
hg38:Y:11028178-TC-T **
hg38:Y:11031432-A-T **
hg19:Y:13196964-A-C hg38:Y:11041288-A-C **
hg19:Y:13226807-A-T hg38:Y:11071131-A-T **
hg19:Y:13256972-C-A hg38:Y:11101296-C-A **
hg19:Y:13259080-A-C hg38:Y:11103404-A-C **
hg19:Y:13294589-C-A hg38:Y:11138913-C-A **
hg19:Y:13403224-A-T hg38:Y:11247548-A-T **
hg19:Y:13453226-ATCCATTCCATTCCATTCCATTCCATTCCAT-A hg38:Y:11297550-ATCCATTCCATTCCATTCCATTCCATTCCAT-A 10×TCCAT**
hg19:Y:13454556-C-A hg38:Y:11298880-C-A **
hg19:Y:13472220-C-G hg38:Y:11316544-C-G **
hg19:Y:13472228-AC-A hg38:Y:11316552-AC-A **
hg19:Y:13513594-C-A hg38:Y:11357918-C-A **
hg19:Y:13521508-G-A hg38:Y:11365832-G-A **
hg19:Y:13534471-C-A hg38:Y:11378795-C-A **
hg19:Y:13545193-C-A hg38:Y:11389517-C-A **
hg19:Y:13566639-T-A hg38:Y:11410963-T-A **
hg19:Y:13602484-T-G hg38:Y:11446808-T-G **
hg19:Y:13620367-C-A hg38:Y:11464691-C-A **
hg19:Y:13698569-A-G hg38:Y:11542893-A-G DYZ17 **
hg19:Y:13722357-T-A hg38:Y:11566681-T-A DYZ17 **
hg19:Y:13734375-C-A hg38:Y:11578699-C-A DYZ17 **
hg19:Y:13734414-T-A hg38:Y:11578738-T-A DYZ17 **
hg19:Y:13734429-T-A hg38:Y:11578753-T-A DYZ17 **
hg38:Y:11646483-C-A DYZ17 **
hg38:Y:11653336-C-A FT450366 DYZ17 **
hg38:Y:11655472-GA-G DYZ17 **
hg38:Y:11666216-T-G DYZ17 **
hg38:Y:11667302-A-C DYZ17 **
hg38:Y:11667332-GTGGAA-G DYZ17 **
hg38:Y:11669587-A-C DYZ17 **
hg38:Y:11672849-A-C DYZ17 **
hg19:Y:13838346-C-A hg38:Y:11717640-C-A DYZ17 **
hg19:Y:13854386-T-G hg38:Y:11733680-T-G DYZ17 **
hg19:Y:13872293-A-C hg38:Y:11751587-A-C **
hg19:Y:13880825-T-G hg38:Y:11760119-T-G **
hg19:Y:13939172-A-G hg38:Y:11818466-A-G **
hg19:Y:13952654-T-G hg38:Y:11831948-T-G **
hg19:Y:13987137-A-G hg38:Y:11866431-A-G **
hg19:Y:14000374-A-T hg38:Y:11879668-A-T **
hg19:Y:14023176-C-A hg38:Y:11902470-C-A **
hg19:Y:14052915-C-A hg38:Y:11932209-C-A **
hg19:Y:14195309-C-A hg38:Y:12074603-C-A **
hg19:Y:14212202-T-G hg38:Y:12091496-T-G **
hg19:Y:14212207-T-G hg38:Y:12091501-T-G **
hg19:Y:14241938-C-A hg38:Y:12121232-C-A **
hg19:Y:14246774-C-A hg38:Y:12126068-C-A **
hg19:Y:14273916-C-A hg38:Y:12153210-C-A FT410399 **
hg19:Y:14347860-C-T hg38:Y:12227155-C-T **
hg19:Y:14372170-A-T hg38:Y:12251466-A-T **
hg19:Y:14373742-G-A hg38:Y:12253038-G-A **
hg19:Y:14425549-A-T hg38:Y:12304824-A-T **
hg19:Y:14451893-C-A hg38:Y:12331166-C-A **
hg19:Y:14465474-C-A hg38:Y:12344747-C-A **
hg19:Y:14488368-C-A hg38:Y:12367637-C-A **
hg38:Y:12370659-T-A **
hg38:Y:12378425-C-A **
hg19:Y:14507000-C-A hg38:Y:12395205-C-A **
hg19:Y:14509537-T-G hg38:Y:12397742-T-G **
hg19:Y:14516889-T-G hg38:Y:12405090-T-G **
hg19:Y:14526886-C-A hg38:Y:12415087-C-A **
hg19:Y:14532136-C-A hg38:Y:12420337-C-A **
hg19:Y:14570129-T-G hg38:Y:12458329-T-G **
hg19:Y:14570757-T-A hg38:Y:12458957-T-A **
hg19:Y:14570774-T-TA hg38:Y:12458974-T-TA **
hg19:Y:14622317-C-A hg38:Y:12510515-C-A **
hg19:Y:14649346-T-G hg38:Y:12537411-T-G **
hg19:Y:14694735-T-G hg38:Y:12582801-T-G **
hg19:Y:14747376-C-A hg38:Y:12635445-C-A 9×A**
hg19:Y:14750240-C-A hg38:Y:12638309-C-A **
hg38:Y:12675898-A-AT 27×T**
hg19:Y:14862988-C-A hg38:Y:12751054-C-A **
hg19:Y:14931895-C-A hg38:Y:12819960-C-A **
hg19:Y:15103719-C-A hg38:Y:12991807-C-A **
hg19:Y:15104905-T-A hg38:Y:12992993-T-A **
hg19:Y:15177400-G-T hg38:Y:13065486-G-T **
hg19:Y:15179169-C-A hg38:Y:13067255-C-A **
hg19:Y:15191171-T-G hg38:Y:13079257-T-G **
hg19:Y:15210977-A-C hg38:Y:13099063-A-C **
hg19:Y:15218477-T-G hg38:Y:13106563-T-G **
hg19:Y:15305718-C-T hg38:Y:13193817-C-T **
hg19:Y:15401264-A-T hg38:Y:13289384-A-T **
hg19:Y:15474903-C-A hg38:Y:13363023-C-A **
hg19:Y:15475119-C-A hg38:Y:13363239-C-A **
hg19:Y:15532616-C-A hg38:Y:13420736-C-A **
hg19:Y:15559176-A-G hg38:Y:13447296-A-G **
hg19:Y:15617999-A-C hg38:Y:13506119-A-C **
hg19:Y:15631895-C-A hg38:Y:13520015-C-A **
hg19:Y:15677343-T-G hg38:Y:13565463-T-G **
hg19:Y:15677350-A-C hg38:Y:13565470-A-C **
hg19:Y:15734063-A-C hg38:Y:13622183-A-C **
hg19:Y:15781952-C-A hg38:Y:13670072-C-A **
hg19:Y:15790910-C-A hg38:Y:13679030-C-A **
hg19:Y:15832058-T-C hg38:Y:13720178-T-C **
hg19:Y:15863211-G-A hg38:Y:13751331-G-A **
hg19:Y:15890502-A-C hg38:Y:13778622-A-C **
hg19:Y:15928522-G-T hg38:Y:13816642-G-T **
hg19:Y:15985484-C-A hg38:Y:13873604-C-A **
hg19:Y:15999804-G-T hg38:Y:13887924-G-T **
hg19:Y:15999862-G-T hg38:Y:13887982-G-T **
hg19:Y:16048039-TTTA-T hg38:Y:13936159-TTTA-T **
hg19:Y:16176684-A-C hg38:Y:14064804-A-C **
hg19:Y:16313095-A-C hg38:Y:14201215-A-C **
hg19:Y:16336895-T-TTG hg38:Y:14225015-T-TTG **
hg19:Y:16351586-C-A hg38:Y:14239706-C-A **
hg19:Y:16351599-A-T hg38:Y:14239719-A-T **
hg19:Y:16424525-A-T hg38:Y:14312645-A-T **
hg19:Y:16503494-C-A hg38:Y:14391614-C-A **
hg19:Y:16527661-A-C hg38:Y:14415781-A-C **
hg19:Y:16538836-T-G hg38:Y:14426956-T-G **
hg19:Y:16607637-A-C hg38:Y:14495757-A-C **
hg19:Y:16623304-T-A hg38:Y:14511424-T-A **
hg19:Y:16842606-C-A hg38:Y:14730726-C-A **
hg19:Y:16904714-A-T hg38:Y:14792834-A-T **
hg19:Y:16989278-C-A hg38:Y:14877398-C-A **
hg19:Y:17042802-C-A hg38:Y:14930922-C-A **
hg19:Y:17104075-A-T hg38:Y:14992195-A-T **
hg19:Y:17115113-C-A hg38:Y:15003233-C-A **
hg19:Y:17118401-T-A hg38:Y:15006521-T-A **
hg19:Y:17128073-A-T hg38:Y:15016193-A-T **
hg19:Y:17128078-A-T hg38:Y:15016198-A-T **
hg19:Y:17175178-C-T hg38:Y:15063298-C-T **
hg19:Y:17193180-T-G hg38:Y:15081300-T-G **
hg19:Y:17196481-T-G hg38:Y:15084601-T-G **
hg19:Y:17271327-C-A hg38:Y:15159447-C-A **
hg19:Y:17313693-C-A hg38:Y:15201813-C-A **
hg19:Y:17381341-C-A hg38:Y:15269461-C-A **
hg19:Y:17547636-A-G hg38:Y:15435756-A-G **
hg19:Y:17549614-A-T hg38:Y:15437734-A-T **
hg19:Y:17637814-T-G hg38:Y:15525934-T-G **
hg19:Y:17715467-C-A hg38:Y:15603587-C-A **
hg19:Y:17804309-A-C hg38:Y:15692429-A-C **
hg19:Y:17920852-G-A hg38:Y:15808972-G-A **
hg19:Y:17934046-T-G hg38:Y:15822166-T-G **
hg19:Y:18035907-C-A hg38:Y:15924027-C-A **
hg19:Y:18125562-T-A hg38:Y:16013682-T-A **
hg19:Y:18126394-C-A hg38:Y:16014514-C-A **
hg19:Y:18166071-C-A hg38:Y:16054191-C-A **
hg19:Y:18254099-GA-G hg38:Y:16142219-GA-G 9×A**
hg19:Y:18379935-A-T hg38:Y:16268055-A-T P6_Prx **
hg19:Y:18566069-T-G hg38:Y:16454189-T-G **
hg19:Y:18566116-T-A hg38:Y:16454236-T-A **
hg19:Y:18614175-A-T hg38:Y:16502295-A-T **
hg19:Y:18628159-T-A hg38:Y:16516279-T-A **
hg19:Y:18645807-T-A hg38:Y:16533927-T-A **
hg19:Y:18921527-C-A hg38:Y:16809647-C-A **
hg19:Y:18926717-CA-C hg38:Y:16814837-CA-C **
hg19:Y:18926730-A-G hg38:Y:16814850-A-G **
hg19:Y:18926735-C-T hg38:Y:16814855-C-T **
hg19:Y:18940717-C-A hg38:Y:16828837-C-A **
hg19:Y:18950698-A-T hg38:Y:16838818-A-T **
hg19:Y:18994557-A-T hg38:Y:16882677-A-T **
hg19:Y:19073695-G-T hg38:Y:16961815-G-T FTB757 **
hg19:Y:19087945-A-T hg38:Y:16976065-A-T **
hg19:Y:19112437-C-A hg38:Y:17000557-C-A **
hg19:Y:19235197-C-A hg38:Y:17123317-C-A BY179535 9×T**
hg19:Y:19275215-C-A hg38:Y:17163335-C-A **
hg19:Y:19286358-C-A hg38:Y:17174478-C-A **
hg19:Y:19346767-T-A hg38:Y:17234887-T-A **
hg19:Y:19376196-G-T hg38:Y:17264316-G-T **
hg19:Y:19391122-A-T hg38:Y:17279242-A-T **
hg19:Y:19472893-T-G hg38:Y:17361013-T-G **
hg19:Y:19479748-C-A hg38:Y:17367868-C-A **
hg19:Y:19479754-C-A hg38:Y:17367874-C-A **
hg19:Y:19523301-C-A hg38:Y:17411421-C-A **
hg19:Y:19524605-T-A hg38:Y:17412725-T-A **
hg19:Y:19532451-C-T hg38:Y:17420571-C-T **
hg19:Y:19539762-T-G hg38:Y:17427882-T-G **
hg19:Y:19544443-C-A hg38:Y:17432563-C-A **
hg19:Y:19544460-C-A hg38:Y:17432580-C-A **
hg19:Y:19692929-A-C hg38:Y:17581049-A-C P5_Prx **
hg19:Y:19692953-T-G hg38:Y:17581073-T-G P5_Prx **
hg19:Y:19835483-T-TG hg38:Y:17723603-T-TG P5_Prx **
hg19:Y:19867052-T-G hg38:Y:17755172-T-G P5_Prx **
hg19:Y:20049892-G-T hg38:Y:17938012-G-T P5_Prx **
hg19:Y:20049895-C-G hg38:Y:17938015-C-G P5_Prx **
hg19:Y:20049914-T-G hg38:Y:17938034-T-G P5_Prx **
hg19:Y:20049922-G-T hg38:Y:17938042-G-T P5_Prx **
hg19:Y:20049941-G-T hg38:Y:17938061-G-T P5_Prx **
hg19:Y:20242503-T-A hg38:Y:18080617-T-A P5_Dst **
hg19:Y:20242515-T-A hg38:Y:18080629-T-A P5_Dst **
hg19:Y:20242518-T-A hg38:Y:18080632-T-A P5_Dst **
hg19:Y:20363171-T-TA hg38:Y:18201285-T-TA P5_Dst **
hg19:Y:20612189-G-T hg38:Y:18450303-G-T P4_Prx **
hg19:Y:20845467-C-A hg38:Y:18683581-C-A P4_Dst **
hg19:Y:20920842-C-A hg38:Y:18758956-C-A P4_Dst **
hg19:Y:20974924-A-C hg38:Y:18813038-A-C P4_Dst **
hg19:Y:21023154-G-T hg38:Y:18861268-G-T P4_Dst **
hg19:Y:21075998-A-T hg38:Y:18914112-A-T **
hg19:Y:21079138-C-A hg38:Y:18917252-C-A **
hg19:Y:21146234-C-A hg38:Y:18984348-C-A **
hg19:Y:21154547-CCAG-C hg38:Y:18992661-CCAG-C **
hg19:Y:21234642-CATGG-C hg38:Y:19072756-CATGG-C **
hg19:Y:21235209-C-A hg38:Y:19073323-C-A FT383389 **
hg19:Y:21244841-C-A hg38:Y:19082955-C-A **
hg19:Y:21397558-C-A hg38:Y:19235672-C-A **
hg19:Y:21438524-C-A hg38:Y:19276638-C-A **
hg19:Y:21457260-A-C hg38:Y:19295374-A-C **
hg19:Y:21558900-C-A hg38:Y:19397014-C-A **
hg19:Y:21604146-A-C hg38:Y:19442260-A-C **
hg19:Y:21672194-C-A hg38:Y:19510308-C-A **
hg19:Y:21762457-A-T hg38:Y:19600571-A-T **
hg19:Y:21823377-A-T hg38:Y:19661491-A-T **
hg19:Y:21828327-A-C hg38:Y:19666441-A-C **
hg19:Y:21862079-G-T hg38:Y:19700193-G-T **
hg19:Y:22041568-A-C hg38:Y:19879682-A-C **
hg19:Y:22041579-A-C hg38:Y:19879693-A-C **
hg19:Y:22113221-A-T hg38:Y:19951335-A-T **
hg19:Y:22113230-G-T hg38:Y:19951344-G-T **
hg19:Y:22204916-A-C hg38:Y:20043030-A-C **
hg19:Y:22277538-T-A hg38:Y:20115652-T-A DYZ19 **
hg19:Y:22277539-T-A hg38:Y:20115653-T-A DYZ19 **
hg19:Y:22485786-A-T hg38:Y:20323900-A-T DYZ19 **
hg19:Y:22580276-C-A hg38:Y:20418390-C-A **
hg19:Y:22644884-A-C hg38:Y:20482998-A-C **
hg19:Y:22767394-C-A hg38:Y:20605508-C-A **
hg19:Y:22803979-A-T hg38:Y:20642093-A-T **
hg19:Y:22833731-C-A hg38:Y:20671845-C-A **
hg19:Y:22934532-A-C hg38:Y:20772646-A-C **
hg19:Y:23026267-G-A hg38:Y:20864381-G-A **
hg19:Y:23035829-C-A hg38:Y:20873943-C-A **
hg19:Y:23056402-C-A hg38:Y:20894516-C-A **
hg19:Y:23068193-A-T hg38:Y:20906307-A-T **
hg19:Y:23079159-T-G hg38:Y:20917273-T-G **
hg19:Y:23126573-C-A hg38:Y:20964687-C-A **
hg19:Y:23142906-A-C hg38:Y:20981020-A-C **
hg19:Y:23142916-A-C hg38:Y:20981030-A-C **
hg19:Y:23190114-G-T hg38:Y:21028228-G-T **
hg19:Y:23205860-C-A hg38:Y:21043974-C-A **
hg19:Y:23209038-A-T hg38:Y:21047152-A-T **
hg19:Y:23223345-A-C hg38:Y:21061459-A-C **
hg19:Y:23267168-A-G hg38:Y:21105282-A-G **
hg19:Y:23386477-A-C hg38:Y:21224591-A-C **
hg19:Y:23386485-A-T hg38:Y:21224599-A-T **
hg19:Y:23596885-C-A hg38:Y:21434999-C-A **
hg19:Y:23625611-G-T hg38:Y:21463725-G-T **
hg19:Y:23802384-C-G hg38:Y:21640498-C-G **
hg19:Y:23837829-A-T hg38:Y:21675943-A-T **
hg19:Y:23876189-C-T hg38:Y:21714303-C-T Y23584 **
hg38:Y:21750617-G-C **
hg38:Y:21754412-C-T **
hg19:Y:24406670-C-A hg38:Y:22260523-C-A **
hg19:Y:24406918-G-T hg38:Y:22260771-G-T **
hg19:Y:24415842-C-A hg38:Y:22269695-C-A **
hg19:Y:24447150-AAAAG-A hg38:Y:22301003-AAAAG-A 4×AAAG**
hg19:Y:24608168-T-A hg38:Y:22462021-T-A P3_t2 **
hg19:Y:24870821-C-A hg38:Y:22724674-C-A IR1_R **
hg19:Y:24877137-T-A hg38:Y:22730990-T-A g1 **
hg19:Y:26073180-T-A hg38:Y:23927033-T-A P1_Y1 **
hg19:Y:26142363-T-G hg38:Y:23996216-T-G P1_Y1 **
hg19:Y:26247988-T-C hg38:Y:24101841-T-C P1_Y1 **
hg19:Y:27499398-C-G hg38:Y:25353251-C-G P1_Y2 **
hg19:Y:27595903-C-A hg38:Y:25449756-C-A P1_Y2 **
hg19:Y:28483104-C-A hg38:Y:26336957-C-A **
hg19:Y:28483113-T-A hg38:Y:26336966-T-A **
hg19:Y:28485379-T-G hg38:Y:26339232-T-G **
hg19:Y:28537663-C-A hg38:Y:26391516-C-A **
hg19:Y:28594163-G-T hg38:Y:26448016-G-T **
hg19:Y:28608402-T-G hg38:Y:26462255-T-G **
hg19:Y:28609217-A-T hg38:Y:26463070-A-T **
hg19:Y:28653873-A-C hg38:Y:26507726-A-C **
hg19:Y:28656968-T-A hg38:Y:26510821-T-A **
hg19:Y:28679399-C-A hg38:Y:26533252-C-A **
hg19:Y:28726137-C-A hg38:Y:26579990-C-A **
hg19:Y:28776889-C-A hg38:Y:26630742-C-A **
hg19:Y:28791125-A-T hg38:Y:26644978-A-T **
hg19:Y:28804016-T-A hg38:Y:26657869-T-A **
hg38:Y:56689046-A-T **
hg38:Y:56689064-G-C **
hg38:Y:56728169-A-T **
hg38:Y:56838499-C-A **
hg38:Y:56840712-C-A **
hg38:Y:56847156-A-C **
hg38:Y:56847170-T-A **
hg38:Y:56847182-T-C **
hg38:Y:56850837-C-G **
hg19:Y:4389262-T-C hg38:Y:4521221-T-C FGC81655 ***
hg19:Y:28583283-C-A hg38:Y:26437136-C-A ***
hg19:Y:15462370-C-A hg38:Y:13350490-C-A ***
hg19:Y:14448413-T-G hg38:Y:12327686-T-G ***
hg19:Y:4133597-C-A hg38:Y:4265556-C-A ***
hg19:Y:5853376-G-T hg38:Y:5985335-G-T ***
hg19:Y:6755119-C-A hg38:Y:6887078-C-A ***
hg19:Y:6972167-C-A hg38:Y:7104126-C-A ***
hg19:Y:7274882-C-A hg38:Y:7406841-C-A ***
hg19:Y:7537733-TGCA-T hg38:Y:7669692-TGCA-T ***
hg19:Y:7970860-CT-C,CTT hg38:Y:8102819-CT-C,CTT 12×T***
hg19:Y:8802090-C-A hg38:Y:8934049-C-A ***
hg19:Y:9880721-C-A hg38:Y:10043112-C-A ***
hg19:Y:9881296-C-A hg38:Y:10043687-C-A ***
hg19:Y:9973181-C-A hg38:Y:10135572-C-A ***
hg38:Y:10861208-T-C ***
hg19:Y:13681767-C-A hg38:Y:11526091-C-A DYZ17 ***
hg19:Y:14851460-C-A hg38:Y:12739526-C-A ***
hg19:Y:14865647-ATTGTTTTT-A hg38:Y:12753713-ATTGTTTTT-A ***
hg19:Y:15557054-A-C hg38:Y:13445174-A-C ***
hg19:Y:15557088-C-A hg38:Y:13445208-C-A ***
hg19:Y:15564296-CA-C hg38:Y:13452416-CA-C 8×A***
hg19:Y:16216948-C-A hg38:Y:14105068-C-A ***
hg19:Y:16217101-C-A hg38:Y:14105221-C-A ***
hg19:Y:16275777-C-A hg38:Y:14163897-C-A ***
hg19:Y:16560076-C-A hg38:Y:14448196-C-A ***
hg19:Y:16766404-C-A hg38:Y:14654524-C-A ***
hg19:Y:16908876-G-T hg38:Y:14796996-G-T ***
hg19:Y:16992375-C-A hg38:Y:14880495-C-A ***
hg19:Y:17374928-G-T hg38:Y:15263048-G-T ***
hg19:Y:17489650-G-A hg38:Y:15377770-G-A ***
hg19:Y:18060031-CTT-C,CT hg38:Y:15948151-CTT-C,CT 11×T***
hg19:Y:18241703-C-A hg38:Y:16129823-C-A Y25592 ***
hg19:Y:18243078-C-A hg38:Y:16131198-C-A ***
hg19:Y:18704362-A-G hg38:Y:16592482-A-G ***
hg19:Y:19395555-C-A hg38:Y:17283675-C-A ***
hg19:Y:19476374-C-A hg38:Y:17364494-C-A ***
hg19:Y:21175790-C-A hg38:Y:19013904-C-A ***
hg19:Y:21200866-C-A hg38:Y:19038980-C-A ***
hg19:Y:21468954-C-A hg38:Y:19307068-C-A ***
hg19:Y:21492453-C-A hg38:Y:19330567-C-A ***
hg19:Y:21565806-T-G hg38:Y:19403920-T-G ***
hg19:Y:22538636-TA-T hg38:Y:20376750-TA-T ***
hg19:Y:22811615-A-G hg38:Y:20649729-A-G ***
hg19:Y:22934249-C-CTTT hg38:Y:20772363-C-CTTT 12×T***
hg19:Y:23488863-AAC-A hg38:Y:21326977-AAC-A ***
hg19:Y:28763651-C-A hg38:Y:26617504-C-A ***
hg38:Y:56827778-CGAGTCCATTCCATTCCATTCTAGTCCATTCCATTC-C,CGAGTCCATTCCATTCCTTTCTAGTCCATTCCATTA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 677933919911075680407497688
Used in age calculations919911075680407497688
Counts of SNPs11
Variant counts last updated 2021-06-26 16:46:16.



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