Carlile
BigY2: 658874Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 658874 |
|---|---|---|---|---|---|---|---|
| hg19:Y:20620800-C-T hg38:Y:18458914-C-T | P4_Prx | A* | |||||
| hg19:Y:4417219-T-C hg38:Y:4549178-T-C | BY58151 | + | |||||
| hg19:Y:13681236-G-C hg38:Y:11525560-G-C | BY88228 | DYZ17 | + | ||||
| hg19:Y:17912283-C-G hg38:Y:15800403-C-G | Y | Y | + | ||||
| hg19:Y:18947681-C-T hg38:Y:16835801-C-T | BY125021 | Y | Y | + | |||
| hg19:Y:22271963-G-C hg38:Y:20110077-G-C | FT454393 | DYZ19 | + | ||||
| hg19:Y:22318413-A-T hg38:Y:20156527-A-T | BY217352 | DYZ19 | + | ||||
| hg19:Y:22225262-T-A hg38:Y:20063376-T-A | DYZ19 | * | |||||
| hg19:Y:3599664-C-A hg38:Y:3731623-C-A | ** | ||||||
| hg19:Y:28627420-C-A hg38:Y:26481273-C-A | ** | ||||||
| hg19:Y:23425364-C-A hg38:Y:21263478-C-A | ** | ||||||
| hg19:Y:28375668-G-A hg38:Y:26229521-G-A | P1_gr2 | ** | |||||
| hg19:Y:3501132-C-A hg38:Y:3633091-C-A | ** | ||||||
| hg19:Y:8785617-T-A hg38:Y:8917576-T-A | ** | ||||||
| hg19:Y:17006261-C-A hg38:Y:14894381-C-A | 17×T | ** | |||||
| hg19:Y:7774190-C-A hg38:Y:7906149-C-A | ** | ||||||
| hg19:Y:7474459-T-A hg38:Y:7606418-T-A | IR1_L | ** | |||||
| hg38:Y:10993044-C-A | ** | ||||||
| hg38:Y:10749728-A-T | ** | ||||||
| hg38:Y:10749739-C-T | FT429537 | ** | |||||
| hg38:Y:10749746-G-C | ** | ||||||
| hg38:Y:10749778-A-T | ** | ||||||
| hg38:Y:10998884-CTGCAT-C | ** | ||||||
| hg38:Y:10998896-C-A | ** | ||||||
| hg38:Y:10998909-T-C | ** | ||||||
| hg19:Y:20762286-G-T hg38:Y:18600400-G-T | P4_Prx | ** | |||||
| hg19:Y:26089887-C-A hg38:Y:23943740-C-A | P1_Y1 | ** | |||||
| hg19:Y:16467687-C-A hg38:Y:14355807-C-A | ** | ||||||
| hg19:Y:14397790-C-A hg38:Y:12277086-C-A | ** | ||||||
| hg19:Y:7166601-C-T hg38:Y:7298560-C-T | 20×AT | ** | |||||
| hg38:Y:10987318-C-A | ** | ||||||
| hg19:Y:15423835-G-T hg38:Y:13311955-G-T | ** | ||||||
| hg19:Y:26538912-A-T hg38:Y:24392765-A-T | P1_g2 | ** | |||||
| hg19:Y:18930007-C-A hg38:Y:16818127-C-A | ** | ||||||
| hg38:Y:10836513-C-CAATTT | ** | ||||||
| hg19:Y:6916181-C-A hg38:Y:7048140-C-A | ** | ||||||
| hg19:Y:7258743-G-T hg38:Y:7390702-G-T | ** | ||||||
| hg19:Y:21283285-C-A hg38:Y:19121399-C-A | ** | ||||||
| hg19:Y:22167213-T-A hg38:Y:20005327-T-A | ** | ||||||
| hg19:Y:14351194-C-A hg38:Y:12230489-C-A | ** | ||||||
| hg38:Y:10889826-A-T | ** | ||||||
| hg38:Y:10934935-T-C | ** | ||||||
| hg19:Y:28762603-C-A hg38:Y:26616456-C-A | ** | ||||||
| hg19:Y:27714219-C-A hg38:Y:25568072-C-A | P1_Y2 | ** | |||||
| hg19:Y:28741127-C-A hg38:Y:26594980-C-A | ** | ||||||
| hg19:Y:9942943-T-A hg38:Y:10105334-T-A | ** | ||||||
| hg38:Y:56822460-A-C | ** | ||||||
| hg19:Y:8314276-C-T hg38:Y:8446235-C-T | ** | ||||||
| hg38:Y:10976154-C-A | ** | ||||||
| hg19:Y:13268456-C-A hg38:Y:11112780-C-A | ** | ||||||
| hg19:Y:14491361-C-A hg38:Y:12379558-C-A | ** | ||||||
| hg38:Y:11003148-C-T | ** | ||||||
| hg19:Y:18728710-C-A hg38:Y:16616830-C-A | ** | ||||||
| hg19:Y:15943720-C-A hg38:Y:13831840-C-A | ** | ||||||
| hg38:Y:10689021-TC-T | ** | ||||||
| hg19:Y:28747704-C-A hg38:Y:26601557-C-A | ** | ||||||
| hg38:Y:11665457-A-C | DYZ17 | ** | |||||
| hg19:Y:2701289-C-A hg38:Y:2833248-C-A | ** | ||||||
| hg19:Y:2729823-T-G hg38:Y:2861782-T-G | ** | ||||||
| hg19:Y:2729832-T-G hg38:Y:2861791-T-G | ** | ||||||
| hg19:Y:2806231-T-G hg38:Y:2938190-T-G | ** | ||||||
| hg19:Y:2940501-C-A hg38:Y:3072460-C-A | ** | ||||||
| hg19:Y:2981357-T-G hg38:Y:3113316-T-G | ** | ||||||
| hg19:Y:3107695-G-T hg38:Y:3239654-G-T | ** | ||||||
| hg19:Y:3131893-G-T hg38:Y:3263852-G-T | ** | ||||||
| hg19:Y:3291997-G-T hg38:Y:3423956-G-T | ** | ||||||
| hg19:Y:3374811-T-C hg38:Y:3506770-T-C | ** | ||||||
| hg19:Y:3421592-AGTCTATATAT-A hg38:Y:3553551-AGTCTATATAT-A | ** | ||||||
| hg19:Y:3463089-TG-T hg38:Y:3595048-TG-T | ** | ||||||
| hg19:Y:3501188-C-A hg38:Y:3633147-C-A | ** | ||||||
| hg19:Y:3553907-C-A hg38:Y:3685866-C-A | ** | ||||||
| hg19:Y:3674179-A-G hg38:Y:3806138-A-G | ** | ||||||
| hg19:Y:3681404-G-T hg38:Y:3813363-G-T | ** | ||||||
| hg19:Y:3681572-T-G hg38:Y:3813531-T-G | ** | ||||||
| hg19:Y:3723511-G-T hg38:Y:3855470-G-T | ** | ||||||
| hg19:Y:3808307-T-A hg38:Y:3940266-T-A | ** | ||||||
| hg19:Y:3834949-C-T hg38:Y:3966908-C-T | ** | ||||||
| hg19:Y:3834950-G-A hg38:Y:3966909-G-A | ** | ||||||
| hg19:Y:3834951-G-GAT hg38:Y:3966910-G-GAT | ** | ||||||
| hg19:Y:3888246-G-T hg38:Y:4020205-G-T | ** | ||||||
| hg19:Y:4016548-T-A hg38:Y:4148507-T-A | ** | ||||||
| hg19:Y:4016560-T-A hg38:Y:4148519-T-A | ** | ||||||
| hg19:Y:4042300-C-A hg38:Y:4174259-C-A | ** | ||||||
| hg19:Y:4062634-C-A hg38:Y:4194593-C-A | ** | ||||||
| hg19:Y:4081590-C-A hg38:Y:4213549-C-A | ** | ||||||
| hg19:Y:4088310-C-T hg38:Y:4220269-C-T | ** | ||||||
| hg19:Y:4088514-C-T hg38:Y:4220473-C-T | ** | ||||||
| hg19:Y:4129832-C-A hg38:Y:4261791-C-A | ** | ||||||
| hg19:Y:4217449-G-T hg38:Y:4349408-G-T | ** | ||||||
| hg19:Y:4342379-G-T hg38:Y:4474338-G-T | ** | ||||||
| hg19:Y:4406276-G-T hg38:Y:4538235-G-T | ** | ||||||
| hg19:Y:4417407-C-A hg38:Y:4549366-C-A | ** | ||||||
| hg19:Y:4417501-C-A hg38:Y:4549460-C-A | ** | ||||||
| hg19:Y:4460907-C-A hg38:Y:4592866-C-A | ** | ||||||
| hg19:Y:4656525-G-T hg38:Y:4788484-G-T | ** | ||||||
| hg19:Y:4770437-C-T hg38:Y:4902396-C-T | ** | ||||||
| hg19:Y:4804552-C-A hg38:Y:4936511-C-A | ** | ||||||
| hg19:Y:4806467-G-T hg38:Y:4938426-G-T | ** | ||||||
| hg19:Y:4887777-A-C hg38:Y:5019736-A-C | ** | ||||||
| hg19:Y:4908229-G-C hg38:Y:5040188-G-C | ** | ||||||
| hg19:Y:4932007-C-A hg38:Y:5063966-C-A | ** | ||||||
| hg19:Y:4999894-G-T hg38:Y:5131853-G-T | ** | ||||||
| hg19:Y:5025815-G-T hg38:Y:5157774-G-T | ** | ||||||
| hg19:Y:5095267-T-A hg38:Y:5227226-T-A | ** | ||||||
| hg19:Y:5107826-T-G hg38:Y:5239785-T-G | ** | ||||||
| hg19:Y:5171603-A-C hg38:Y:5303562-A-C | ** | ||||||
| hg19:Y:5171716-C-A hg38:Y:5303675-C-A | ** | ||||||
| hg19:Y:5188597-C-A hg38:Y:5320556-C-A | ** | ||||||
| hg19:Y:5200766-G-T hg38:Y:5332725-G-T | ** | ||||||
| hg19:Y:5242828-C-T hg38:Y:5374787-C-T | ** | ||||||
| hg19:Y:5249683-C-A hg38:Y:5381642-C-A | ** | ||||||
| hg19:Y:5313327-T-A hg38:Y:5445286-T-A | ** | ||||||
| hg19:Y:5313438-C-A hg38:Y:5445397-C-A | ** | ||||||
| hg19:Y:5347943-A-C hg38:Y:5479902-A-C | ** | ||||||
| hg19:Y:5366921-G-T hg38:Y:5498880-G-T | ** | ||||||
| hg19:Y:5420616-C-A hg38:Y:5552575-C-A | ** | ||||||
| hg19:Y:5449247-G-T hg38:Y:5581206-G-T | ** | ||||||
| hg19:Y:5449312-T-G hg38:Y:5581271-T-G | ** | ||||||
| hg19:Y:5524074-C-A hg38:Y:5656033-C-A | ** | ||||||
| hg19:Y:5639999-G-T hg38:Y:5771958-G-T | ** | ||||||
| hg19:Y:5699056-G-T hg38:Y:5831015-G-T | ** | ||||||
| hg19:Y:5756486-A-C hg38:Y:5888445-A-C | ** | ||||||
| hg19:Y:5813832-G-T hg38:Y:5945791-G-T | ** | ||||||
| hg19:Y:5842599-A-G hg38:Y:5974558-A-G | ** | ||||||
| hg19:Y:5863031-T-C hg38:Y:5994990-T-C | ** | ||||||
| hg19:Y:5873556-C-A hg38:Y:6005515-C-A | ** | ||||||
| hg19:Y:5901654-C-A hg38:Y:6033613-C-A | ** | ||||||
| hg19:Y:5935747-C-A hg38:Y:6067706-C-A | ** | ||||||
| hg19:Y:6028329-C-A hg38:Y:6160288-C-A | ** | ||||||
| hg19:Y:6029125-G-T hg38:Y:6161084-G-T | ** | ||||||
| hg19:Y:6037520-A-T hg38:Y:6169479-A-T | ** | ||||||
| hg19:Y:6078654-G-T hg38:Y:6210613-G-T | ** | ||||||
| hg19:Y:6183292-G-T hg38:Y:6315251-G-T | IR3_Dst | ** | |||||
| hg19:Y:6352886-G-T hg38:Y:6484845-G-T | ** | ||||||
| hg19:Y:6375747-C-A hg38:Y:6507706-C-A | ** | ||||||
| hg19:Y:6414300-C-A hg38:Y:6546259-C-A | ** | ||||||
| hg19:Y:6467317-T-C hg38:Y:6599276-T-C | ** | ||||||
| hg19:Y:6484723-G-T hg38:Y:6616682-G-T | ** | ||||||
| hg19:Y:6490401-T-G hg38:Y:6622360-T-G | ** | ||||||
| hg19:Y:6599270-G-T hg38:Y:6731229-G-T | ** | ||||||
| hg19:Y:6637186-C-A hg38:Y:6769145-C-A | ** | ||||||
| hg19:Y:6666279-T-A hg38:Y:6798238-T-A | ** | ||||||
| hg19:Y:6688719-A-C hg38:Y:6820678-A-C | ** | ||||||
| hg19:Y:6976376-C-A hg38:Y:7108335-C-A | ** | ||||||
| hg19:Y:6977350-G-T hg38:Y:7109309-G-T | ** | ||||||
| hg19:Y:6977351-C-A hg38:Y:7109310-C-A | ** | ||||||
| hg19:Y:7043438-G-T hg38:Y:7175397-G-T | ** | ||||||
| hg19:Y:7081760-G-T hg38:Y:7213719-G-T | ** | ||||||
| hg19:Y:7107088-T-A hg38:Y:7239047-T-A | ** | ||||||
| hg19:Y:7109470-C-A hg38:Y:7241429-C-A | ** | ||||||
| hg19:Y:7139373-T-A hg38:Y:7271332-T-A | ** | ||||||
| hg19:Y:7258739-G-T hg38:Y:7390698-G-T | ** | ||||||
| hg19:Y:7258754-TC-T hg38:Y:7390713-TC-T | ** | ||||||
| hg19:Y:7281932-C-A hg38:Y:7413891-C-A | ** | ||||||
| hg19:Y:7348965-A-T hg38:Y:7480924-A-T | ** | ||||||
| hg19:Y:7362566-C-A hg38:Y:7494525-C-A | ** | ||||||
| hg19:Y:7383914-T-A hg38:Y:7515873-T-A | ** | ||||||
| hg19:Y:7383920-T-A hg38:Y:7515879-T-A | ** | ||||||
| hg19:Y:7385496-A-C hg38:Y:7517455-A-C | ** | ||||||
| hg19:Y:7418551-G-T hg38:Y:7550510-G-T | ** | ||||||
| hg19:Y:7423859-G-T hg38:Y:7555818-G-T | ** | ||||||
| hg19:Y:7436133-C-A hg38:Y:7568092-C-A | ** | ||||||
| hg19:Y:7621906-C-A hg38:Y:7753865-C-A | ** | ||||||
| hg19:Y:7756903-C-A hg38:Y:7888862-C-A | ** | ||||||
| hg19:Y:7896971-G-T hg38:Y:8028930-G-T | ** | ||||||
| hg19:Y:7990151-T-G hg38:Y:8122110-T-G | ** | ||||||
| hg19:Y:7990336-C-A hg38:Y:8122295-C-A | ** | ||||||
| hg19:Y:8074539-C-A hg38:Y:8206498-C-A | ** | ||||||
| hg19:Y:8085383-C-A hg38:Y:8217342-C-A | ** | ||||||
| hg19:Y:8153877-C-A hg38:Y:8285836-C-A | ** | ||||||
| hg19:Y:8173788-C-A hg38:Y:8305747-C-A | ** | ||||||
| hg19:Y:8314235-C-T hg38:Y:8446194-C-T | ** | ||||||
| hg19:Y:8314264-T-G hg38:Y:8446223-T-G | ** | ||||||
| hg19:Y:8386111-A-C hg38:Y:8518070-A-C | ** | ||||||
| hg19:Y:8725152-C-A hg38:Y:8857111-C-A | ** | ||||||
| hg19:Y:8732849-A-C hg38:Y:8864808-A-C | ** | ||||||
| hg19:Y:8822555-TAAA-T hg38:Y:8954514-TAAA-T | ** | ||||||
| hg38:Y:9120161-T-A | ** | ||||||
| hg19:Y:9015674-C-A hg38:Y:9178065-C-A | ** | ||||||
| hg19:Y:9077022-T-A hg38:Y:9239413-T-A | ** | ||||||
| hg19:Y:9079434-G-T hg38:Y:9241825-G-T | ** | ||||||
| hg19:Y:9697539-A-ACT hg38:Y:9859930-A-ACT | IR3_Prx | ** | |||||
| hg19:Y:9923019-A-G hg38:Y:10085410-A-G | ** | ||||||
| hg19:Y:10023807-C-A hg38:Y:10186198-C-A | ** | ||||||
| hg19:Y:10051416-T-C hg38:Y:10213807-T-C | ** | ||||||
| hg38:Y:10618404-T-A | ** | ||||||
| hg38:Y:10647956-G-C | ** | ||||||
| hg38:Y:10647957-A-C | ** | ||||||
| hg38:Y:10647971-C-T | ** | ||||||
| hg38:Y:10647976-C-A | ** | ||||||
| hg38:Y:10652364-T-G | ** | ||||||
| hg38:Y:10677595-C-A | ** | ||||||
| hg38:Y:10683252-C-T | ** | ||||||
| hg38:Y:10686920-T-G | ** | ||||||
| hg38:Y:10689020-T-C | ** | ||||||
| hg38:Y:10747018-C-CATTCTGTTCAGGTTA | ** | ||||||
| hg38:Y:10748259-T-C | ** | ||||||
| hg38:Y:10748273-A-AGTCCG | ** | ||||||
| hg38:Y:10749992-A-T | ** | ||||||
| hg38:Y:10777505-GCTCTA-G | ** | ||||||
| hg38:Y:10779695-G-T | ** | ||||||
| hg38:Y:10813531-C-A | ** | ||||||
| hg38:Y:10827106-T-G | ** | ||||||
| hg38:Y:10837484-C-A | ** | ||||||
| hg38:Y:10848490-G-T | ** | ||||||
| hg38:Y:10877573-C-A | ** | ||||||
| hg38:Y:10880153-C-A | ** | ||||||
| hg38:Y:10882275-C-A | ** | ||||||
| hg38:Y:10885003-A-T | ** | ||||||
| hg38:Y:10907705-C-A | ** | ||||||
| hg38:Y:10921924-A-T | ** | ||||||
| hg38:Y:10934870-T-A | ** | ||||||
| hg38:Y:10934903-C-T | ** | ||||||
| hg38:Y:10935565-T-TGCAGC | ** | ||||||
| hg38:Y:10935586-C-CCTTTT | ** | ||||||
| hg38:Y:10969164-T-C | ** | ||||||
| hg38:Y:10977648-C-A | ** | ||||||
| hg38:Y:10984057-G-C | ** | ||||||
| hg38:Y:10989280-T-C | ** | ||||||
| hg38:Y:10993033-C-T | ** | ||||||
| hg38:Y:10995492-C-A | ** | ||||||
| hg38:Y:11008777-C-A | ** | ||||||
| hg38:Y:11017663-G-T | ** | ||||||
| hg38:Y:11017723-C-A | ** | ||||||
| hg38:Y:11021371-C-A | ** | ||||||
| hg38:Y:11025302-C-A | ** | ||||||
| hg38:Y:11025715-C-A | ** | ||||||
| hg38:Y:11026151-CG-A | ** | ||||||
| hg38:Y:11026165-G-A | ** | ||||||
| hg38:Y:11026173-C-T | ** | ||||||
| hg38:Y:11029506-C-A | ** | ||||||
| hg38:Y:11035281-C-A | ** | ||||||
| hg19:Y:13226759-C-A hg38:Y:11071083-C-A | ** | ||||||
| hg19:Y:13243952-T-G hg38:Y:11088276-T-G | ** | ||||||
| hg19:Y:13253233-T-G hg38:Y:11097557-T-G | ** | ||||||
| hg19:Y:13255635-C-A hg38:Y:11099959-C-A | ** | ||||||
| hg19:Y:13271755-T-A hg38:Y:11116079-T-A | ** | ||||||
| hg19:Y:13315661-C-A hg38:Y:11159985-C-A | ** | ||||||
| hg19:Y:13430503-G-T hg38:Y:11274827-G-T | ** | ||||||
| hg19:Y:13461149-G-T hg38:Y:11305473-G-T | ** | ||||||
| hg19:Y:13463949-T-TC hg38:Y:11308273-T-TC | 8×C | ** | |||||
| hg38:Y:11647288-C-A | DYZ17 | ** | |||||
| hg38:Y:11663167-G-T | DYZ17 | ** | |||||
| hg38:Y:11668059-G-T | DYZ17 | ** | |||||
| hg38:Y:11672031-C-A | DYZ17 | ** | |||||
| hg19:Y:13856859-C-A hg38:Y:11736153-C-A | DYZ17 | ** | |||||
| hg19:Y:13874082-C-G hg38:Y:11753376-C-G | ** | ||||||
| hg19:Y:13901864-C-A hg38:Y:11781158-C-A | ** | ||||||
| hg19:Y:13908519-T-A hg38:Y:11787813-T-A | ** | ||||||
| hg19:Y:13936281-A-C hg38:Y:11815575-A-C | ** | ||||||
| hg19:Y:13936310-A-C hg38:Y:11815604-A-C | ** | ||||||
| hg19:Y:13941026-C-A hg38:Y:11820320-C-A | ** | ||||||
| hg19:Y:14007679-C-A hg38:Y:11886973-C-A | ** | ||||||
| hg19:Y:14032163-A-C hg38:Y:11911457-A-C | ** | ||||||
| hg19:Y:14052825-A-T hg38:Y:11932119-A-T | ** | ||||||
| hg19:Y:14067225-C-A hg38:Y:11946519-C-A | ** | ||||||
| hg19:Y:14076958-AT-A hg38:Y:11956252-AT-A | 9×T | ** | |||||
| hg19:Y:14088881-A-G hg38:Y:11968175-A-G | ** | ||||||
| hg19:Y:14108738-T-G hg38:Y:11988032-T-G | ** | ||||||
| hg19:Y:14124046-C-A hg38:Y:12003340-C-A | ** | ||||||
| hg19:Y:14230153-C-A hg38:Y:12109447-C-A | ** | ||||||
| hg19:Y:14270100-T-G hg38:Y:12149394-T-G | ** | ||||||
| hg19:Y:14270542-A-C hg38:Y:12149836-A-C | ** | ||||||
| hg19:Y:14379357-A-T hg38:Y:12258653-A-T | ** | ||||||
| hg19:Y:14395666-C-A hg38:Y:12274962-C-A | ** | ||||||
| hg19:Y:14425711-C-A hg38:Y:12304986-C-A | ** | ||||||
| hg19:Y:14432276-C-A hg38:Y:12311549-C-A | ** | ||||||
| hg19:Y:14451348-C-A hg38:Y:12330621-C-A | ** | ||||||
| hg19:Y:14451355-C-A hg38:Y:12330628-C-A | ** | ||||||
| hg19:Y:14501897-C-T hg38:Y:12390102-C-T | ** | ||||||
| hg19:Y:14508617-C-A hg38:Y:12396822-C-A | ** | ||||||
| hg19:Y:14518501-C-A hg38:Y:12406702-C-A | ** | ||||||
| hg19:Y:14518695-A-C hg38:Y:12406896-A-C | ** | ||||||
| hg19:Y:14524235-C-A hg38:Y:12412436-C-A | ** | ||||||
| hg19:Y:14678779-C-A hg38:Y:12566845-C-A | ** | ||||||
| hg19:Y:14719749-C-A hg38:Y:12607817-C-A | ** | ||||||
| hg19:Y:14743550-A-C hg38:Y:12631619-A-C | ** | ||||||
| hg19:Y:14761199-A-C hg38:Y:12649268-A-C | ** | ||||||
| hg19:Y:14986364-C-A hg38:Y:12874432-C-A | ** | ||||||
| hg19:Y:15066091-A-C hg38:Y:12954183-A-C | ** | ||||||
| hg19:Y:15109606-C-A hg38:Y:12997693-C-A | ** | ||||||
| hg19:Y:15126349-T-G hg38:Y:13014436-T-G | ** | ||||||
| hg19:Y:15226051-G-T hg38:Y:13114137-G-T | ** | ||||||
| hg19:Y:15392347-A-T hg38:Y:13280467-A-T | ** | ||||||
| hg19:Y:15399137-C-A hg38:Y:13287257-C-A | ** | ||||||
| hg19:Y:15449958-T-C hg38:Y:13338078-T-C | ** | ||||||
| hg19:Y:15533621-C-A hg38:Y:13421741-C-A | ** | ||||||
| hg19:Y:15541812-G-T hg38:Y:13429932-G-T | ** | ||||||
| hg19:Y:15636056-C-A hg38:Y:13524176-C-A | ** | ||||||
| hg19:Y:15749170-C-A hg38:Y:13637290-C-A | ** | ||||||
| hg19:Y:15770185-C-A hg38:Y:13658305-C-A | ** | ||||||
| hg19:Y:15823745-C-A hg38:Y:13711865-C-A | ** | ||||||
| hg19:Y:15923948-C-A hg38:Y:13812068-C-A | ** | ||||||
| hg19:Y:15927782-C-A hg38:Y:13815902-C-A | FT86907 | ** | |||||
| hg19:Y:15931641-G-T hg38:Y:13819761-G-T | ** | ||||||
| hg19:Y:16000135-CTTGG-C hg38:Y:13888255-CTTGG-C | ** | ||||||
| hg19:Y:16050410-C-A hg38:Y:13938530-C-A | ** | ||||||
| hg19:Y:16060414-C-A hg38:Y:13948534-C-A | ** | ||||||
| hg19:Y:16162120-AAG-A hg38:Y:14050240-AAG-A | P8_Dst | ** | |||||
| hg19:Y:16181189-A-C hg38:Y:14069309-A-C | ** | ||||||
| hg19:Y:16246056-G-T hg38:Y:14134176-G-T | ** | ||||||
| hg19:Y:16277844-C-A hg38:Y:14165964-C-A | ** | ||||||
| hg19:Y:16297422-C-A hg38:Y:14185542-C-A | ** | ||||||
| hg19:Y:16422562-C-A hg38:Y:14310682-C-A | ** | ||||||
| hg19:Y:16428609-C-A hg38:Y:14316729-C-A | ** | ||||||
| hg19:Y:16429739-G-T hg38:Y:14317859-G-T | ** | ||||||
| hg19:Y:16430502-C-A hg38:Y:14318622-C-A | ** | ||||||
| hg19:Y:16515916-C-A hg38:Y:14404036-C-A | 11×TATT | ** | |||||
| hg19:Y:16559733-C-A hg38:Y:14447853-C-A | ** | ||||||
| hg19:Y:16575100-G-A hg38:Y:14463220-G-A | ** | ||||||
| hg19:Y:16607749-C-A hg38:Y:14495869-C-A | ** | ||||||
| hg19:Y:16623439-T-G hg38:Y:14511559-T-G | ** | ||||||
| hg19:Y:16635878-C-A hg38:Y:14523998-C-A | ** | ||||||
| hg19:Y:16665519-T-A hg38:Y:14553639-T-A | ** | ||||||
| hg19:Y:16702945-T-G hg38:Y:14591065-T-G | ** | ||||||
| hg19:Y:16843085-T-A hg38:Y:14731205-T-A | ** | ||||||
| hg19:Y:16881525-C-A hg38:Y:14769645-C-A | ** | ||||||
| hg19:Y:16914424-A-T hg38:Y:14802544-A-T | ** | ||||||
| hg19:Y:16952753-C-A hg38:Y:14840873-C-A | ** | ||||||
| hg19:Y:16971281-C-A hg38:Y:14859401-C-A | ** | ||||||
| hg19:Y:17006253-A-T hg38:Y:14894373-A-T | ** | ||||||
| hg19:Y:17157508-C-A hg38:Y:15045628-C-A | ** | ||||||
| hg19:Y:17363169-G-T hg38:Y:15251289-G-T | ** | ||||||
| hg19:Y:17500279-C-A hg38:Y:15388399-C-A | ** | ||||||
| hg19:Y:17500674-GTCCCATTCTCCACA-G hg38:Y:15388794-GTCCCATTCTCCACA-G | ** | ||||||
| hg19:Y:17568184-C-A hg38:Y:15456304-C-A | ** | ||||||
| hg19:Y:17622733-T-G hg38:Y:15510853-T-G | ** | ||||||
| hg19:Y:17626200-A-G hg38:Y:15514320-A-G | ** | ||||||
| hg19:Y:17860627-C-A hg38:Y:15748747-C-A | ** | ||||||
| hg19:Y:17883826-T-G hg38:Y:15771946-T-G | ** | ||||||
| hg19:Y:17927988-G-T hg38:Y:15816108-G-T | ** | ||||||
| hg19:Y:18006654-CTTT-C hg38:Y:15894774-CTTT-C | P7_Gap | 12×T | ** | ||||
| hg19:Y:18189308-C-A hg38:Y:16077428-C-A | ** | ||||||
| hg19:Y:18196256-G-T hg38:Y:16084376-G-T | ** | ||||||
| hg19:Y:18315979-T-A hg38:Y:16204099-T-A | P6_Prx | ** | |||||
| hg19:Y:18315987-T-A hg38:Y:16204107-T-A | P6_Prx | ** | |||||
| hg19:Y:18315990-T-A hg38:Y:16204110-T-A | P6_Prx | ** | |||||
| hg19:Y:18316007-G-T hg38:Y:16204127-G-T | P6_Prx | ** | |||||
| hg19:Y:18316015-T-A hg38:Y:16204135-T-A | P6_Prx | ** | |||||
| hg19:Y:18316032-G-C hg38:Y:16204152-G-C | P6_Prx | ** | |||||
| hg19:Y:18378959-C-CTTTT hg38:Y:16267079-C-CTTTT | P6_Prx | 28×T | ** | ||||
| hg19:Y:18390062-A-C hg38:Y:16278182-A-C | P6_Gap | ** | |||||
| hg19:Y:18465527-C-A hg38:Y:16353647-C-A | P6_Dst | ** | |||||
| hg19:Y:18682732-C-A hg38:Y:16570852-C-A | ** | ||||||
| hg19:Y:18707946-C-A hg38:Y:16596066-C-A | ** | ||||||
| hg19:Y:18728712-G-T hg38:Y:16616832-G-T | ** | ||||||
| hg19:Y:18742466-ATTGATTGTGGACATGACACTTAAC-A hg38:Y:16630586-ATTGATTGTGGACATGACACTTAAC-A | ** | ||||||
| hg19:Y:18848557-G-T hg38:Y:16736677-G-T | ** | ||||||
| hg19:Y:18874027-C-A hg38:Y:16762147-C-A | ** | ||||||
| hg19:Y:18901065-G-A hg38:Y:16789185-G-A | ** | ||||||
| hg19:Y:18956067-A-G hg38:Y:16844187-A-G | ** | ||||||
| hg19:Y:18956073-C-A hg38:Y:16844193-C-A | ** | ||||||
| hg19:Y:18956084-A-G hg38:Y:16844204-A-G | ** | ||||||
| hg19:Y:19125221-C-A hg38:Y:17013341-C-A | ** | ||||||
| hg19:Y:19127699-C-A hg38:Y:17015819-C-A | ** | ||||||
| hg19:Y:19415775-G-T hg38:Y:17303895-G-T | ** | ||||||
| hg19:Y:19616939-A-T hg38:Y:17505059-A-T | P5_Prx | ** | |||||
| hg19:Y:19616953-G-T hg38:Y:17505073-G-T | P5_Prx | ** | |||||
| hg19:Y:19616959-C-A hg38:Y:17505079-C-A | P5_Prx | ** | |||||
| hg19:Y:19616962-G-T hg38:Y:17505082-G-T | P5_Prx | ** | |||||
| hg19:Y:19795146-A-AG hg38:Y:17683266-A-AG | P5_Prx | ** | |||||
| hg19:Y:19819565-C-A hg38:Y:17707685-C-A | P5_Prx | ** | |||||
| hg19:Y:19819583-T-A hg38:Y:17707703-T-A | P5_Prx | ** | |||||
| hg19:Y:19819597-C-A hg38:Y:17707717-C-A | P5_Prx | ** | |||||
| hg19:Y:19819611-T-A hg38:Y:17707731-T-A | P5_Prx | ** | |||||
| hg19:Y:19925895-A-AT hg38:Y:17814015-A-AT | P5_Prx | ** | |||||
| hg19:Y:19949651-A-T hg38:Y:17837771-A-T | P5_Prx | ** | |||||
| hg19:Y:19958287-T-TA hg38:Y:17846407-T-TA | P5_Prx | ** | |||||
| hg19:Y:20053566-C-A hg38:Y:17941686-C-A | P5_Prx | ** | |||||
| hg19:Y:20053624-C-A hg38:Y:17941744-C-A | P5_Prx | ** | |||||
| hg19:Y:20053643-A-T hg38:Y:17941763-A-T | P5_Prx | ** | |||||
| hg19:Y:20500942-G-GAAAA hg38:Y:18339056-G-GAAAA | P5_Dst | 15×A | ** | ||||
| hg19:Y:20644136-G-T hg38:Y:18482250-G-T | P4_Prx | ** | |||||
| hg19:Y:20644149-T-A hg38:Y:18482263-T-A | P4_Prx | ** | |||||
| hg19:Y:20644167-T-A hg38:Y:18482281-T-A | P4_Prx | ** | |||||
| hg19:Y:20693883-T-A hg38:Y:18531997-T-A | P4_Prx | ** | |||||
| hg19:Y:20693884-G-T hg38:Y:18531998-G-T | P4_Prx | ** | |||||
| hg19:Y:20693894-T-A hg38:Y:18532008-T-A | P4_Prx | ** | |||||
| hg19:Y:20693907-C-A hg38:Y:18532021-C-A | P4_Prx | ** | |||||
| hg19:Y:20693916-C-A hg38:Y:18532030-C-A | P4_Prx | ** | |||||
| hg19:Y:20693925-T-A hg38:Y:18532039-T-A | P4_Prx | ** | |||||
| hg19:Y:20762287-A-T hg38:Y:18600401-A-T | P4_Prx | ** | |||||
| hg19:Y:20771716-A-AC hg38:Y:18609830-A-AC | P4_Prx | ** | |||||
| hg19:Y:20809530-C-A hg38:Y:18647644-C-A | P4_Gap | ** | |||||
| hg19:Y:20872294-T-C hg38:Y:18710408-T-C | P4_Dst | ** | |||||
| hg19:Y:21211227-G-T hg38:Y:19049341-G-T | ** | ||||||
| hg19:Y:21220949-G-T hg38:Y:19059063-G-T | ** | ||||||
| hg19:Y:21234946-C-A hg38:Y:19073060-C-A | ** | ||||||
| hg19:Y:21323641-C-A hg38:Y:19161755-C-A | ** | ||||||
| hg19:Y:21368333-C-A hg38:Y:19206447-C-A | ** | ||||||
| hg19:Y:21393994-A-G hg38:Y:19232108-A-G | ** | ||||||
| hg19:Y:21498681-C-A hg38:Y:19336795-C-A | ** | ||||||
| hg19:Y:21597104-C-A hg38:Y:19435218-C-A | ** | ||||||
| hg19:Y:21630906-A-C hg38:Y:19469020-A-C | ** | ||||||
| hg19:Y:21911053-A-C hg38:Y:19749167-A-C | ** | ||||||
| hg19:Y:21939734-T-G hg38:Y:19777848-T-G | ** | ||||||
| hg19:Y:21939743-C-A hg38:Y:19777857-C-A | ** | ||||||
| hg19:Y:22214849-C-A hg38:Y:20052963-C-A | ** | ||||||
| hg19:Y:22564670-T-G hg38:Y:20402784-T-G | ** | ||||||
| hg19:Y:22619335-G-T hg38:Y:20457449-G-T | ** | ||||||
| hg19:Y:22640561-TG-T hg38:Y:20478675-TG-T | ** | ||||||
| hg19:Y:22956082-A-C hg38:Y:20794196-A-C | ** | ||||||
| hg19:Y:23019227-TG-T hg38:Y:20857341-TG-T | ** | ||||||
| hg19:Y:23047735-C-A hg38:Y:20885849-C-A | ** | ||||||
| hg19:Y:23111755-C-A hg38:Y:20949869-C-A | ** | ||||||
| hg19:Y:23144220-T-G hg38:Y:20982334-T-G | ** | ||||||
| hg19:Y:23204510-C-A hg38:Y:21042624-C-A | ** | ||||||
| hg19:Y:23341885-T-A hg38:Y:21179999-T-A | ** | ||||||
| hg19:Y:23345624-C-A hg38:Y:21183738-C-A | ** | ||||||
| hg19:Y:23464870-G-A hg38:Y:21302984-G-A | ** | ||||||
| hg19:Y:23723647-A-C hg38:Y:21561761-A-C | ** | ||||||
| hg38:Y:21751669-G-T | ** | ||||||
| hg19:Y:24296217-T-A hg38:Y:22150070-T-A | P3_t1 | ** | |||||
| hg19:Y:24404419-G-T hg38:Y:22258272-G-T | ** | ||||||
| hg19:Y:25246429-C-A hg38:Y:23100282-C-A | P2_r1 | ** | |||||
| hg19:Y:25981072-T-A hg38:Y:23834925-T-A | P1_Y1 | ** | |||||
| hg19:Y:25981082-T-A hg38:Y:23834935-T-A | P1_Y1 | ** | |||||
| hg19:Y:25981083-C-A hg38:Y:23834936-C-A | P1_Y1 | ** | |||||
| hg19:Y:25981095-T-A hg38:Y:23834948-T-A | P1_Y1 | ** | |||||
| hg19:Y:26100562-T-A hg38:Y:23954415-T-A | P1_Y1 | ** | |||||
| hg19:Y:26100572-G-C hg38:Y:23954425-G-C | P1_Y1 | ** | |||||
| hg19:Y:26355355-T-G hg38:Y:24209208-T-G | P1_Y1 | ** | |||||
| hg19:Y:26563217-T-A hg38:Y:24417070-T-A | P1_g2 | ** | |||||
| hg19:Y:26563218-T-A hg38:Y:24417071-T-A | P1_g2 | ** | |||||
| hg19:Y:26563229-C-A hg38:Y:24417082-C-A | P1_g2 | ** | |||||
| hg19:Y:26834643-GAA-G hg38:Y:24688496-GAA-G | P1_g2 | ** | |||||
| hg19:Y:27021768-G-T hg38:Y:24875621-G-T | P1_r4 | ** | |||||
| hg19:Y:27733457-T-G hg38:Y:25587310-T-G | P1_Y2 | ** | |||||
| hg19:Y:27762737-C-A hg38:Y:25616590-C-A | P1_Y2 | ** | |||||
| hg19:Y:27762741-A-T hg38:Y:25616594-A-T | P1_Y2 | ** | |||||
| hg19:Y:27762752-G-T hg38:Y:25616605-G-T | P1_Y2 | ** | |||||
| hg19:Y:27762766-A-T hg38:Y:25616619-A-T | P1_Y2 | ** | |||||
| hg19:Y:27861903-AAAAACT-A hg38:Y:25715756-AAAAACT-A | P1_Y2 | ** | |||||
| hg19:Y:27909148-A-T hg38:Y:25763001-A-T | P1_Y2 | ** | |||||
| hg19:Y:27909155-A-T hg38:Y:25763008-A-T | P1_Y2 | ** | |||||
| hg19:Y:28023644-A-T hg38:Y:25877497-A-T | P1_Y2 | ** | |||||
| hg19:Y:28081488-G-T hg38:Y:25935341-G-T | P1_Y2 | ** | |||||
| hg19:Y:28081504-T-A hg38:Y:25935357-T-A | P1_Y2 | ** | |||||
| hg19:Y:28081507-T-A hg38:Y:25935360-T-A | P1_Y2 | ** | |||||
| hg19:Y:28081525-G-T hg38:Y:25935378-G-T | P1_Y2 | ** | |||||
| hg19:Y:28103972-C-G hg38:Y:25957825-C-G | P1_Y2 | ** | |||||
| hg19:Y:28229193-G-T hg38:Y:26083046-G-T | P1_b4 | ** | |||||
| hg19:Y:28369942-G-T hg38:Y:26223795-G-T | P1_gr2 | ** | |||||
| hg19:Y:28375647-G-T hg38:Y:26229500-G-T | P1_gr2 | ** | |||||
| hg19:Y:28375686-C-A hg38:Y:26229539-C-A | P1_gr2 | ** | |||||
| hg19:Y:28475275-C-A hg38:Y:26329128-C-A | ** | ||||||
| hg19:Y:28475326-C-A hg38:Y:26329179-C-A | ** | ||||||
| hg19:Y:28497249-T-G hg38:Y:26351102-T-G | ** | ||||||
| hg19:Y:28517445-C-A hg38:Y:26371298-C-A | ** | ||||||
| hg19:Y:28529565-C-A hg38:Y:26383418-C-A | ** | ||||||
| hg19:Y:28533726-C-A hg38:Y:26387579-C-A | ** | ||||||
| hg19:Y:28543297-C-A hg38:Y:26397150-C-A | ** | ||||||
| hg19:Y:28556220-C-A hg38:Y:26410073-C-A | FT27129 | ** | |||||
| hg19:Y:28585696-C-A hg38:Y:26439549-C-A | ** | ||||||
| hg19:Y:28592175-C-A hg38:Y:26446028-C-A | ** | ||||||
| hg19:Y:28601628-G-C hg38:Y:26455481-G-C | ** | ||||||
| hg19:Y:28608506-G-A hg38:Y:26462359-G-A | ** | ||||||
| hg19:Y:28617392-C-A hg38:Y:26471245-C-A | ** | ||||||
| hg19:Y:28659794-C-A hg38:Y:26513647-C-A | ** | ||||||
| hg19:Y:28666168-A-C hg38:Y:26520021-A-C | ** | ||||||
| hg19:Y:28666309-A-C hg38:Y:26520162-A-C | ** | ||||||
| hg19:Y:28714234-C-A hg38:Y:26568087-C-A | ** | ||||||
| hg19:Y:28724865-A-T hg38:Y:26578718-A-T | ** | ||||||
| hg19:Y:28815232-T-C hg38:Y:26669085-T-C | ** | ||||||
| hg38:Y:56829950-T-A | ** | ||||||
| hg38:Y:56830081-T-C | ** | ||||||
| hg38:Y:56830163-C-A | ** | ||||||
| hg38:Y:56836564-C-A | ** | ||||||
| hg38:Y:56837796-A-G | ** | ||||||
| hg38:Y:56848633-CTTGTGATATA-C | ** | ||||||
| hg19:Y:15374419-G-T hg38:Y:13262539-G-T | *** | ||||||
| hg19:Y:8238295-G-T hg38:Y:8370254-G-T | *** | ||||||
| hg19:Y:9374728-C-A hg38:Y:9537119-C-A | *** | ||||||
| hg38:Y:10987239-C-G,T | *** | ||||||
| hg38:Y:11000437-C-T | *** | ||||||
| hg19:Y:3047717-C-A hg38:Y:3179676-C-A | *** | ||||||
| hg19:Y:7043490-C-A hg38:Y:7175449-C-A | *** | ||||||
| hg19:Y:8384741-G-T hg38:Y:8516700-G-T | *** | ||||||
| hg38:Y:10682519-T-A | *** | ||||||
| hg38:Y:10682557-C-A | *** | ||||||
| hg38:Y:10746968-A-AGGTTA,C | *** | ||||||
| hg38:Y:10789047-C-G | *** | ||||||
| hg19:Y:13194058-C-A hg38:Y:11038382-C-A | *** | ||||||
| hg19:Y:13463420-C-A hg38:Y:11307744-C-A | *** | ||||||
| hg38:Y:11653801-G-T | DYZ17 | *** | |||||
| hg19:Y:14366593-G-A hg38:Y:12245888-G-A | *** | ||||||
| hg19:Y:14424953-G-T hg38:Y:12304228-G-T | *** | ||||||
| hg19:Y:16427489-C-A hg38:Y:14315609-C-A | *** | ||||||
| hg19:Y:17284532-CTT-C,CT hg38:Y:15172652-CTT-C,CT | 21×T | *** | |||||
| hg19:Y:18804523-A-C hg38:Y:16692643-A-C | *** | ||||||
| hg19:Y:18984007-C-T hg38:Y:16872127-C-T | *** | ||||||
| hg19:Y:19546311-C-A hg38:Y:17434431-C-A | *** | ||||||
| hg19:Y:21262450-ATTCCCTTAT-A hg38:Y:19100564-ATTCCCTTAT-A | *** | ||||||
| hg19:Y:23264332-C-A hg38:Y:21102446-C-A | *** | ||||||
| hg19:Y:28370015-T-TAGAG hg38:Y:26223868-T-TAGAG | P1_gr2 | 16×AG | *** | ||||
| hg19:Y:28587252-C-A hg38:Y:26441105-C-A | *** | ||||||
| hg38:Y:56826035-GAGTTC-G | *** | ||||||
| hg38:Y:56836661-C-A | *** | ||||||
| hg38:Y:56837206-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 658874 | 9878119 | 8049487 | 7934116 |
| Used in age calculations | 9878119 | 8049487 | 7934116 |
| Counts of SNPs | 2 | 2 |
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