Caldwell
BigY2: 628119MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 628119 |
---|---|---|---|---|---|---|---|
hg19:Y:19827015-G-C hg38:Y:17715135-G-C | P5_Prx | A* | |||||
hg19:Y:9039758-G-C hg38:Y:9202149-G-C | BY77603 | Y | + | ||||
hg19:Y:9382714-T-C hg38:Y:9545105-T-C | BY156079 | Y | + | ||||
hg19:Y:14804699-T-A hg38:Y:12692770-T-A | BY97675 | Y | Y | + | |||
hg19:Y:17612483-G-A hg38:Y:15500603-G-A | MF4658 | Y | Y | + | |||
hg19:Y:23059591-G-A hg38:Y:20897705-G-A | L511 PF1888 | ** | |||||
hg19:Y:59008520-A-T hg38:Y:56862373-A-T | ** | ||||||
hg19:Y:13453340-A-T hg38:Y:11297664-A-T | ** | ||||||
hg19:Y:24930121-G-T hg38:Y:22783974-G-T | g1 | ** | |||||
hg38:Y:10826576-T-A | ** | ||||||
hg19:Y:16244982-C-A hg38:Y:14133102-C-A | ** | ||||||
hg19:Y:28816035-G-T hg38:Y:26669888-G-T | ** | ||||||
hg38:Y:10946604-C-T | ** | ||||||
hg19:Y:5215783-C-A hg38:Y:5347742-C-A | ** | ||||||
hg19:Y:13466127-C-A hg38:Y:11310451-C-A | ** | ||||||
hg19:Y:8076833-C-A hg38:Y:8208792-C-A | ** | ||||||
hg19:Y:28567489-C-A hg38:Y:26421342-C-A | ** | ||||||
hg19:Y:13696395-A-T hg38:Y:11540719-A-T | DYZ17 | ** | |||||
hg19:Y:19746855-A-T hg38:Y:17634975-A-T | P5_Prx | ** | |||||
hg19:Y:19746877-A-T hg38:Y:17634997-A-T | P5_Prx | ** | |||||
hg19:Y:13839880-C-T hg38:Y:11719174-C-T | FT20672 | DYZ17 | ** | ||||
hg19:Y:9438082-G-T hg38:Y:9600473-G-T | ** | ||||||
hg19:Y:13213318-C-A hg38:Y:11057642-C-A | FT376067 | ** | |||||
hg38:Y:11653466-G-T | DYZ17 | ** | |||||
hg38:Y:10744485-A-T | ** | ||||||
hg38:Y:10747003-C-T | ** | ||||||
hg19:Y:13708336-G-T hg38:Y:11552660-G-T | DYZ17 | ** | |||||
hg19:Y:13708353-A-T hg38:Y:11552677-A-T | DYZ17 | ** | |||||
hg38:Y:10928150-T-A | ** | ||||||
hg19:Y:17770558-C-A hg38:Y:15658678-C-A | ** | ||||||
hg38:Y:10844212-C-T | ** | ||||||
hg38:Y:10844213-C-T | ** | ||||||
hg38:Y:10844240-T-C | ** | ||||||
hg38:Y:10844246-T-G | ** | ||||||
hg38:Y:10844250-T-C | ** | ||||||
hg38:Y:10978718-C-A | ** | ||||||
hg38:Y:10785279-A-G | ** | ||||||
hg38:Y:56827361-C-A | ** | ||||||
hg19:Y:2684120-C-A hg38:Y:2816079-C-A | ** | ||||||
hg19:Y:3104813-T-A hg38:Y:3236772-T-A | ** | ||||||
hg19:Y:3139277-G-T hg38:Y:3271236-G-T | ** | ||||||
hg19:Y:3184792-G-T hg38:Y:3316751-G-T | ** | ||||||
hg19:Y:3385320-T-A hg38:Y:3517279-T-A | ** | ||||||
hg19:Y:3511568-A-T hg38:Y:3643527-A-T | ** | ||||||
hg19:Y:3626432-T-G hg38:Y:3758391-T-G | ** | ||||||
hg19:Y:3626750-G-T hg38:Y:3758709-G-T | ** | ||||||
hg19:Y:3631169-T-A hg38:Y:3763128-T-A | ** | ||||||
hg19:Y:3650862-A-C hg38:Y:3782821-A-C | ** | ||||||
hg19:Y:3685227-G-T hg38:Y:3817186-G-T | ** | ||||||
hg19:Y:3771505-G-A hg38:Y:3903464-G-A | ** | ||||||
hg19:Y:3923204-C-A hg38:Y:4055163-C-A | ** | ||||||
hg19:Y:4003070-C-A hg38:Y:4135029-C-A | ** | ||||||
hg19:Y:4127578-C-A hg38:Y:4259537-C-A | ** | ||||||
hg19:Y:4226328-G-T hg38:Y:4358287-G-T | ** | ||||||
hg19:Y:4382770-T-A hg38:Y:4514729-T-A | ** | ||||||
hg19:Y:4470018-A-G hg38:Y:4601977-A-G | ** | ||||||
hg19:Y:4533693-T-A hg38:Y:4665652-T-A | ** | ||||||
hg19:Y:4588866-T-C hg38:Y:4720825-T-C | ** | ||||||
hg19:Y:4872481-C-A hg38:Y:5004440-C-A | ** | ||||||
hg19:Y:4900832-G-T hg38:Y:5032791-G-T | ** | ||||||
hg19:Y:4918911-CACAAT-C hg38:Y:5050870-CACAAT-C | ** | ||||||
hg19:Y:4919273-G-T hg38:Y:5051232-G-T | ** | ||||||
hg19:Y:4920082-GT-G hg38:Y:5052041-GT-G | ** | ||||||
hg19:Y:4937062-G-T hg38:Y:5069021-G-T | ** | ||||||
hg19:Y:4968771-C-A hg38:Y:5100730-C-A | ** | ||||||
hg19:Y:5044623-C-A hg38:Y:5176582-C-A | ** | ||||||
hg19:Y:5055116-G-T hg38:Y:5187075-G-T | ** | ||||||
hg19:Y:5058616-G-T hg38:Y:5190575-G-T | ** | ||||||
hg19:Y:5058617-T-A hg38:Y:5190576-T-A | ** | ||||||
hg19:Y:5221099-A-T hg38:Y:5353058-A-T | ** | ||||||
hg19:Y:5313431-C-G hg38:Y:5445390-C-G | ** | ||||||
hg19:Y:5484028-T-A hg38:Y:5615987-T-A | ** | ||||||
hg19:Y:5484200-C-G hg38:Y:5616159-C-G | ** | ||||||
hg19:Y:5554560-A-G hg38:Y:5686519-A-G | ** | ||||||
hg19:Y:5586081-C-A hg38:Y:5718040-C-A | ** | ||||||
hg19:Y:5627715-C-A hg38:Y:5759674-C-A | ** | ||||||
hg19:Y:5644667-C-A hg38:Y:5776626-C-A | ** | ||||||
hg19:Y:5756089-A-C hg38:Y:5888048-A-C | ** | ||||||
hg19:Y:5785634-C-A hg38:Y:5917593-C-A | ** | ||||||
hg19:Y:5897017-G-T hg38:Y:6028976-G-T | ** | ||||||
hg19:Y:6055142-A-G hg38:Y:6187101-A-G | ** | ||||||
hg19:Y:6226004-C-A hg38:Y:6357963-C-A | IR3_Dst | ** | |||||
hg19:Y:6403639-T-C hg38:Y:6535598-T-C | FTB39129 | ** | |||||
hg19:Y:6694435-C-A hg38:Y:6826394-C-A | ** | ||||||
hg19:Y:6757076-C-A hg38:Y:6889035-C-A | ** | ||||||
hg19:Y:6772271-C-A hg38:Y:6904230-C-A | ** | ||||||
hg19:Y:6829564-T-A hg38:Y:6961523-T-A | ** | ||||||
hg19:Y:6917577-T-G hg38:Y:7049536-T-G | ** | ||||||
hg19:Y:7021429-G-T hg38:Y:7153388-G-T | ** | ||||||
hg19:Y:7040864-G-T hg38:Y:7172823-G-T | ** | ||||||
hg19:Y:7111747-C-A hg38:Y:7243706-C-A | ** | ||||||
hg19:Y:7170828-G-T hg38:Y:7302787-G-T | ** | ||||||
hg19:Y:7211166-C-A hg38:Y:7343125-C-A | ** | ||||||
hg19:Y:7235193-C-A hg38:Y:7367152-C-A | ** | ||||||
hg19:Y:7236479-C-A hg38:Y:7368438-C-A | ** | ||||||
hg19:Y:7236541-C-A hg38:Y:7368500-C-A | ** | ||||||
hg19:Y:7248161-C-T hg38:Y:7380120-C-T | ** | ||||||
hg19:Y:7254012-A-G hg38:Y:7385971-A-G | ** | ||||||
hg19:Y:7340361-A-T hg38:Y:7472320-A-T | ** | ||||||
hg19:Y:7579847-A-T hg38:Y:7711806-A-T | ** | ||||||
hg19:Y:7579856-A-T hg38:Y:7711815-A-T | ** | ||||||
hg19:Y:7704631-A-C hg38:Y:7836590-A-C | ** | ||||||
hg19:Y:7704660-T-G hg38:Y:7836619-T-G | ** | ||||||
hg19:Y:7866031-A-C hg38:Y:7997990-A-C | ** | ||||||
hg19:Y:8002026-C-A hg38:Y:8133985-C-A | ** | ||||||
hg19:Y:8153586-T-G hg38:Y:8285545-T-G | ** | ||||||
hg19:Y:8238328-T-A hg38:Y:8370287-T-A | ** | ||||||
hg19:Y:8556176-T-G hg38:Y:8688135-T-G | ** | ||||||
hg19:Y:8720190-C-A hg38:Y:8852149-C-A | ** | ||||||
hg19:Y:8776731-T-G hg38:Y:8908690-T-G | ** | ||||||
hg19:Y:8776739-A-G hg38:Y:8908698-A-G | ** | ||||||
hg19:Y:8817029-C-G hg38:Y:8948988-C-G | ** | ||||||
hg19:Y:9015862-C-A hg38:Y:9178253-C-A | ** | ||||||
hg19:Y:9117170-T-G hg38:Y:9279561-T-G | ** | ||||||
hg19:Y:9311643-T-A hg38:Y:9474034-T-A | ** | ||||||
hg19:Y:9311653-C-A hg38:Y:9474044-C-A | ** | ||||||
hg19:Y:9311664-A-T hg38:Y:9474055-A-T | ** | ||||||
hg19:Y:9311665-G-T hg38:Y:9474056-G-T | ** | ||||||
hg19:Y:9311672-C-A hg38:Y:9474063-C-A | ** | ||||||
hg19:Y:9311677-C-A hg38:Y:9474068-C-A | ** | ||||||
hg19:Y:9311681-C-A hg38:Y:9474072-C-A | 14×T | ** | |||||
hg19:Y:9420185-A-T hg38:Y:9582576-A-T | ** | ||||||
hg19:Y:9438088-C-A hg38:Y:9600479-C-A | ** | ||||||
hg19:Y:9511521-G-T hg38:Y:9673912-G-T | ** | ||||||
hg19:Y:9514257-A-G hg38:Y:9676648-A-G | ** | ||||||
hg19:Y:9590558-C-A hg38:Y:9752949-C-A | IR3_Prx | 13×T | ** | ||||
hg19:Y:9590560-T-TA hg38:Y:9752951-T-TA | IR3_Prx | ** | |||||
hg19:Y:9928549-T-G hg38:Y:10090940-T-G | ** | ||||||
hg19:Y:9928559-A-T hg38:Y:10090950-A-T | ** | ||||||
hg19:Y:9928567-C-T hg38:Y:10090958-C-T | ** | ||||||
hg19:Y:9928570-T-C hg38:Y:10090961-T-C | ** | ||||||
hg19:Y:9928575-C-T hg38:Y:10090966-C-T | ** | ||||||
hg19:Y:9928576-T-G hg38:Y:10090967-T-G | ** | ||||||
hg19:Y:9928585-C-T hg38:Y:10090976-C-T | ** | ||||||
hg19:Y:9928586-A-G hg38:Y:10090977-A-G | ** | ||||||
hg19:Y:9931200-C-A hg38:Y:10093591-C-A | ** | ||||||
hg19:Y:9962231-T-G hg38:Y:10124622-T-G | ** | ||||||
hg19:Y:9965921-C-A hg38:Y:10128312-C-A | ** | ||||||
hg19:Y:10051301-T-A hg38:Y:10213692-T-A | ** | ||||||
hg38:Y:10629625-T-A | ** | ||||||
hg38:Y:10652899-ACACTC-A | ** | ||||||
hg38:Y:10654505-C-G | ** | ||||||
hg38:Y:10654531-C-A | ** | ||||||
hg38:Y:10654535-A-T | ** | ||||||
hg38:Y:10655058-T-C | ** | ||||||
hg38:Y:10655059-T-G | ** | ||||||
hg38:Y:10655060-T-G | ** | ||||||
hg38:Y:10672019-C-A | ** | ||||||
hg38:Y:10672186-TTGCAG-T | ** | ||||||
hg38:Y:10693303-A-T | ** | ||||||
hg38:Y:10746183-C-A | ** | ||||||
hg38:Y:10751326-G-T | ** | ||||||
hg38:Y:10754848-C-A | ** | ||||||
hg38:Y:10760112-C-A | ** | ||||||
hg38:Y:10768756-T-C | ** | ||||||
hg38:Y:10770752-C-A | ** | ||||||
hg38:Y:10770782-A-T | ** | ||||||
hg38:Y:10770807-C-A | ** | ||||||
hg38:Y:10785303-C-G | ** | ||||||
hg38:Y:10785313-C-G | ** | ||||||
hg38:Y:10785568-A-T | ** | ||||||
hg38:Y:10787824-G-T | ** | ||||||
hg38:Y:10790092-A-T | ** | ||||||
hg38:Y:10797406-C-A | FT230055 | ** | |||||
hg38:Y:10800819-C-T | ** | ||||||
hg38:Y:10800851-A-T | ** | ||||||
hg38:Y:10800852-T-C | ** | ||||||
hg38:Y:10802685-C-T | ** | ||||||
hg38:Y:10814522-G-T | ** | ||||||
hg38:Y:10821456-C-A | ** | ||||||
hg38:Y:10821461-C-A | ** | ||||||
hg38:Y:10823049-C-A | ** | ||||||
hg38:Y:10824594-TTG-T | ** | ||||||
hg38:Y:10833029-T-A | ** | ||||||
hg38:Y:10833030-T-A | ** | ||||||
hg38:Y:10833039-ACCCCT-A | ** | ||||||
hg38:Y:10833055-C-T | ** | ||||||
hg38:Y:10833069-C-G | ** | ||||||
hg38:Y:10833944-C-A | ** | ||||||
hg38:Y:10834300-G-T | ** | ||||||
hg38:Y:10836517-T-G | ** | ||||||
hg38:Y:10838711-C-A | ** | ||||||
hg38:Y:10838970-C-A | ** | ||||||
hg38:Y:10842031-G-T | ** | ||||||
hg38:Y:10862399-C-A | ** | ||||||
hg38:Y:10866057-C-CAATTT | ** | ||||||
hg38:Y:10866358-G-T | ** | ||||||
hg38:Y:10868220-A-T | FT434781 | ** | |||||
hg38:Y:10868269-C-A | ** | ||||||
hg38:Y:10868277-A-T | ** | ||||||
hg38:Y:10868559-C-T | ** | ||||||
hg38:Y:10884416-A-C | ** | ||||||
hg38:Y:10885351-C-A | ** | ||||||
hg38:Y:10889355-A-T | ** | ||||||
hg38:Y:10890171-C-A | ** | ||||||
hg38:Y:10907840-G-A | ** | ||||||
hg38:Y:10926047-G-T | ** | ||||||
hg38:Y:10928122-T-A | ** | ||||||
hg38:Y:10939967-T-A | ** | ||||||
hg38:Y:10943946-C-A | ** | ||||||
hg38:Y:10946560-A-ATTCT | ** | ||||||
hg38:Y:10947917-A-T | ** | ||||||
hg38:Y:10949393-C-A | ** | ||||||
hg38:Y:10950099-G-A | ** | ||||||
hg38:Y:10968945-C-A | ** | ||||||
hg38:Y:10971702-C-A | ** | ||||||
hg38:Y:10975784-T-G | ** | ||||||
hg38:Y:10982945-C-A | ** | ||||||
hg38:Y:10982947-T-A | ** | ||||||
hg38:Y:10982948-C-T | ** | ||||||
hg38:Y:10982963-C-G | ** | ||||||
hg38:Y:10982973-C-A | ** | ||||||
hg38:Y:10988771-A-T | ** | ||||||
hg38:Y:10994331-T-A | ** | ||||||
hg38:Y:10994336-C-T | ** | ||||||
hg38:Y:10994349-C-G | ** | ||||||
hg38:Y:10994706-T-C | ** | ||||||
hg38:Y:10995610-T-A | ** | ||||||
hg38:Y:10995624-A-C | ** | ||||||
hg38:Y:10995626-T-G | ** | ||||||
hg38:Y:10995819-C-A | ** | ||||||
hg38:Y:11000136-C-A | ** | ||||||
hg38:Y:11003275-A-C | ** | ||||||
hg38:Y:11003285-T-G | ** | ||||||
hg38:Y:11031191-C-A | ** | ||||||
hg19:Y:13197976-C-T hg38:Y:11042300-C-T | FGC82060 | ** | |||||
hg19:Y:13234500-A-G hg38:Y:11078824-A-G | ** | ||||||
hg19:Y:13255352-G-C hg38:Y:11099676-G-C | ** | ||||||
hg19:Y:13404427-A-C hg38:Y:11248751-A-C | ** | ||||||
hg19:Y:13447229-T-G hg38:Y:11291553-T-G | ** | ||||||
hg19:Y:13596220-G-T hg38:Y:11440544-G-T | ** | ||||||
hg19:Y:13637234-G-T hg38:Y:11481558-G-T | ** | ||||||
hg19:Y:13637313-G-A hg38:Y:11481637-G-A | FT200131 | ** | |||||
hg19:Y:13637407-C-A hg38:Y:11481731-C-A | ** | ||||||
hg19:Y:13696371-A-T hg38:Y:11540695-A-T | DYZ17 | ** | |||||
hg19:Y:13696398-G-A hg38:Y:11540722-G-A | DYZ17 | ** | |||||
hg19:Y:13708320-G-T hg38:Y:11552644-G-T | DYZ17 | ** | |||||
hg19:Y:13708326-G-T hg38:Y:11552650-G-T | DYZ17 | ** | |||||
hg19:Y:13708348-A-T hg38:Y:11552672-A-T | DYZ17 | ** | |||||
hg19:Y:13708365-G-A hg38:Y:11552689-G-A | DYZ17 | ** | |||||
hg19:Y:13725951-G-A hg38:Y:11570275-G-A | DYZ17 | ** | |||||
hg38:Y:11663495-T-G | DYZ17 | ** | |||||
hg19:Y:13798656-A-C hg38:Y:11677950-A-C | DYZ17 | ** | |||||
hg19:Y:13803281-T-A hg38:Y:11682575-T-A | DYZ17 | ** | |||||
hg19:Y:13847143-AGAATG-A hg38:Y:11726437-AGAATG-A | DYZ17 | ** | |||||
hg19:Y:13870633-T-A hg38:Y:11749927-T-A | ** | ||||||
hg19:Y:13870653-G-T hg38:Y:11749947-G-T | ** | ||||||
hg19:Y:13920106-A-G hg38:Y:11799400-A-G | ** | ||||||
hg19:Y:13973245-C-G hg38:Y:11852539-C-G | ** | ||||||
hg19:Y:14029403-T-C hg38:Y:11908697-T-C | ** | ||||||
hg19:Y:14067800-A-T hg38:Y:11947094-A-T | ** | ||||||
hg19:Y:14136164-C-G hg38:Y:12015458-C-G | ** | ||||||
hg19:Y:14142088-A-T hg38:Y:12021382-A-T | ** | ||||||
hg19:Y:14196361-C-A hg38:Y:12075655-C-A | ** | ||||||
hg19:Y:14241932-T-A hg38:Y:12121226-T-A | ** | ||||||
hg19:Y:14253168-T-G hg38:Y:12132462-T-G | ** | ||||||
hg19:Y:14371290-C-A hg38:Y:12250586-C-A | ** | ||||||
hg19:Y:14389995-C-A hg38:Y:12269291-C-A | ** | ||||||
hg19:Y:14451245-A-C hg38:Y:12330518-A-C | ** | ||||||
hg19:Y:14490932-C-A hg38:Y:12370201-C-A | ** | ||||||
hg19:Y:14492596-G-T hg38:Y:12380793-G-T | ** | ||||||
hg19:Y:14530505-C-A hg38:Y:12418706-C-A | ** | ||||||
hg19:Y:14544133-A-T hg38:Y:12432334-A-T | ** | ||||||
hg19:Y:14546616-C-A hg38:Y:12434817-C-A | ** | ||||||
hg19:Y:14568845-T-G hg38:Y:12457045-T-G | ** | ||||||
hg19:Y:14711807-C-A hg38:Y:12599874-C-A | ** | ||||||
hg19:Y:14717724-G-T hg38:Y:12605792-G-T | ** | ||||||
hg19:Y:14755637-A-T hg38:Y:12643706-A-T | ** | ||||||
hg19:Y:15262489-T-A hg38:Y:13150573-T-A | ** | ||||||
hg19:Y:15365305-C-A hg38:Y:13253425-C-A | ** | ||||||
hg19:Y:15365866-C-A hg38:Y:13253986-C-A | ** | ||||||
hg19:Y:15402364-C-A hg38:Y:13290484-C-A | ** | ||||||
hg19:Y:15402457-GT-G hg38:Y:13290577-GT-G | 8×T | ** | |||||
hg19:Y:15433026-T-C hg38:Y:13321146-T-C | ** | ||||||
hg19:Y:15433591-C-A hg38:Y:13321711-C-A | ** | ||||||
hg19:Y:15570970-C-A hg38:Y:13459090-C-A | ** | ||||||
hg19:Y:15612291-C-A hg38:Y:13500411-C-A | ** | ||||||
hg19:Y:15688461-C-A hg38:Y:13576581-C-A | ** | ||||||
hg19:Y:15697063-C-A hg38:Y:13585183-C-A | ** | ||||||
hg19:Y:15852648-T-G hg38:Y:13740768-T-G | ** | ||||||
hg19:Y:16054794-C-A hg38:Y:13942914-C-A | ** | ||||||
hg19:Y:16084255-C-A hg38:Y:13972375-C-A | ** | ||||||
hg19:Y:16177248-C-A hg38:Y:14065368-C-A | ** | ||||||
hg19:Y:16180483-T-A hg38:Y:14068603-T-A | ** | ||||||
hg19:Y:16241734-T-G hg38:Y:14129854-T-G | ** | ||||||
hg19:Y:16342395-G-T hg38:Y:14230515-G-T | ** | ||||||
hg19:Y:16394610-G-T hg38:Y:14282730-G-T | ** | ||||||
hg19:Y:16424873-A-C hg38:Y:14312993-A-C | ** | ||||||
hg19:Y:16427560-C-A hg38:Y:14315680-C-A | ** | ||||||
hg19:Y:16464632-T-G hg38:Y:14352752-T-G | ** | ||||||
hg19:Y:16466829-G-T hg38:Y:14354949-G-T | ** | ||||||
hg19:Y:16583361-G-T hg38:Y:14471481-G-T | ** | ||||||
hg19:Y:16629353-A-G hg38:Y:14517473-A-G | ** | ||||||
hg19:Y:16652868-G-C hg38:Y:14540988-G-C | ** | ||||||
hg19:Y:16932830-T-C hg38:Y:14820950-T-C | ** | ||||||
hg19:Y:17029345-G-T hg38:Y:14917465-G-T | ** | ||||||
hg19:Y:17084734-C-A hg38:Y:14972854-C-A | ** | ||||||
hg19:Y:17261933-T-G hg38:Y:15150053-T-G | ** | ||||||
hg19:Y:17306438-C-A hg38:Y:15194558-C-A | ** | ||||||
hg19:Y:17319882-A-C hg38:Y:15208002-A-C | ** | ||||||
hg19:Y:17372202-C-A hg38:Y:15260322-C-A | ** | ||||||
hg19:Y:17667086-T-C hg38:Y:15555206-T-C | ** | ||||||
hg19:Y:17794289-TTTCT-A hg38:Y:15682409-TTTCT-A | ** | ||||||
hg19:Y:17902849-G-T hg38:Y:15790969-G-T | ** | ||||||
hg19:Y:18086901-C-A hg38:Y:15975021-C-A | ** | ||||||
hg19:Y:18186247-C-A hg38:Y:16074367-C-A | ** | ||||||
hg19:Y:18242779-C-A hg38:Y:16130899-C-A | ** | ||||||
hg19:Y:18354140-G-T hg38:Y:16242260-G-T | P6_Prx | ** | |||||
hg19:Y:18401003-C-A hg38:Y:16289123-C-A | P6_Gap | ** | |||||
hg19:Y:18427773-G-T hg38:Y:16315893-G-T | P6_Dst | ** | |||||
hg19:Y:18622562-G-T hg38:Y:16510682-G-T | ** | ||||||
hg19:Y:18743376-C-A hg38:Y:16631496-C-A | ** | ||||||
hg19:Y:18753533-T-A hg38:Y:16641653-T-A | ** | ||||||
hg19:Y:18951295-C-A hg38:Y:16839415-C-A | ** | ||||||
hg19:Y:18976599-C-A hg38:Y:16864719-C-A | ** | ||||||
hg19:Y:19007814-C-A hg38:Y:16895934-C-A | ** | ||||||
hg19:Y:19067967-T-C hg38:Y:16956087-T-C | ** | ||||||
hg19:Y:19213526-G-T hg38:Y:17101646-G-T | ** | ||||||
hg19:Y:19258856-T-G hg38:Y:17146976-T-G | ** | ||||||
hg19:Y:19346588-C-A hg38:Y:17234708-C-A | ** | ||||||
hg19:Y:19399833-T-C hg38:Y:17287953-T-C | ** | ||||||
hg19:Y:19524454-T-C hg38:Y:17412574-T-C | ** | ||||||
hg19:Y:19746869-A-C hg38:Y:17634989-A-C | P5_Prx | ** | |||||
hg19:Y:19746881-A-C hg38:Y:17635001-A-C | P5_Prx | ** | |||||
hg19:Y:19755038-T-C hg38:Y:17643158-T-C | P5_Prx | ** | |||||
hg19:Y:19791589-C-A hg38:Y:17679709-C-A | P5_Prx | ** | |||||
hg19:Y:19800962-C-A hg38:Y:17689082-C-A | P5_Prx | ** | |||||
hg19:Y:19800991-C-A hg38:Y:17689111-C-A | P5_Prx | ** | |||||
hg19:Y:19801002-C-A hg38:Y:17689122-C-A | P5_Prx | ** | |||||
hg19:Y:19801011-G-T hg38:Y:17689131-G-T | P5_Prx | ** | |||||
hg19:Y:19926312-A-T hg38:Y:17814432-A-T | P5_Prx | ** | |||||
hg19:Y:19926322-A-T hg38:Y:17814442-A-T | P5_Prx | ** | |||||
hg19:Y:19926342-A-T hg38:Y:17814462-A-T | P5_Prx | ** | |||||
hg19:Y:19963102-A-T hg38:Y:17851222-A-T | P5_Prx | ** | |||||
hg19:Y:19963103-A-T hg38:Y:17851223-A-T | P5_Prx | ** | |||||
hg19:Y:19963122-A-T hg38:Y:17851242-A-T | P5_Prx | ** | |||||
hg19:Y:19963129-C-A hg38:Y:17851249-C-A | P5_Prx | ** | |||||
hg19:Y:19963142-A-T hg38:Y:17851262-A-T | P5_Prx | ** | |||||
hg19:Y:19963148-A-T hg38:Y:17851268-A-T | P5_Prx | ** | |||||
hg19:Y:20211310-CT-C hg38:Y:18049424-CT-C | P5_Dst | ** | |||||
hg19:Y:20213077-C-A hg38:Y:18051191-C-A | P5_Dst | ** | |||||
hg19:Y:20332148-C-A hg38:Y:18170262-C-A | P5_Dst | ** | |||||
hg19:Y:20426369-A-T hg38:Y:18264483-A-T | P5_Dst | ** | |||||
hg19:Y:20460430-T-TG hg38:Y:18298544-T-TG | P5_Dst | ** | |||||
hg19:Y:20505837-C-A hg38:Y:18343951-C-A | P5_Dst | ** | |||||
hg19:Y:20505843-G-T hg38:Y:18343957-G-T | P5_Dst | ** | |||||
hg19:Y:20505846-T-A hg38:Y:18343960-T-A | P5_Dst | ** | |||||
hg19:Y:20505854-A-T hg38:Y:18343968-A-T | P5_Dst | ** | |||||
hg19:Y:20612119-T-G hg38:Y:18450233-T-G | P4_Prx | ** | |||||
hg19:Y:20711203-T-G hg38:Y:18549317-T-G | P4_Prx | ** | |||||
hg19:Y:20711223-A-C hg38:Y:18549337-A-C | P4_Prx | ** | |||||
hg19:Y:20824785-C-A hg38:Y:18662899-C-A | P4_Gap | ** | |||||
hg19:Y:20864958-G-T hg38:Y:18703072-G-T | P4_Dst | ** | |||||
hg19:Y:20864970-C-A hg38:Y:18703084-C-A | P4_Dst | ** | |||||
hg19:Y:20864972-C-A hg38:Y:18703086-C-A | P4_Dst | ** | |||||
hg19:Y:20865487-G-T hg38:Y:18703601-G-T | P4_Dst | 9×TA | ** | ||||
hg19:Y:21268935-A-G hg38:Y:19107049-A-G | ** | ||||||
hg19:Y:21382121-C-A hg38:Y:19220235-C-A | ** | ||||||
hg19:Y:21587645-C-A hg38:Y:19425759-C-A | ** | ||||||
hg19:Y:21679031-A-T hg38:Y:19517145-A-T | ** | ||||||
hg19:Y:21821177-G-T hg38:Y:19659291-G-T | ** | ||||||
hg19:Y:21915638-C-A hg38:Y:19753752-C-A | ** | ||||||
hg19:Y:22010273-C-A hg38:Y:19848387-C-A | ** | ||||||
hg19:Y:22090058-T-C hg38:Y:19928172-T-C | ** | ||||||
hg19:Y:22090059-T-C hg38:Y:19928173-T-C | ** | ||||||
hg19:Y:22146803-T-A hg38:Y:19984917-T-A | ** | ||||||
hg19:Y:22209019-A-T hg38:Y:20047133-A-T | ** | ||||||
hg19:Y:22447045-G-C hg38:Y:20285159-G-C | DYZ19 | ** | |||||
hg19:Y:22452796-A-T hg38:Y:20290910-A-T | DYZ19 | ** | |||||
hg19:Y:22520683-G-T hg38:Y:20358797-G-T | ** | ||||||
hg19:Y:22645766-T-G hg38:Y:20483880-T-G | ** | ||||||
hg19:Y:22659665-T-A hg38:Y:20497779-T-A | ** | ||||||
hg19:Y:22659730-T-A hg38:Y:20497844-T-A | ** | ||||||
hg19:Y:22810710-A-T hg38:Y:20648824-A-T | ** | ||||||
hg19:Y:22876530-A-C hg38:Y:20714644-A-C | ** | ||||||
hg19:Y:22963445-A-T hg38:Y:20801559-A-T | ** | ||||||
hg19:Y:23185907-T-A hg38:Y:21024021-T-A | ** | ||||||
hg19:Y:23202817-A-T hg38:Y:21040931-A-T | FT164361 | ** | |||||
hg19:Y:23225876-T-A hg38:Y:21063990-T-A | ** | ||||||
hg19:Y:23225897-T-A hg38:Y:21064011-T-A | ** | ||||||
hg19:Y:23225899-G-T hg38:Y:21064013-G-T | ** | ||||||
hg19:Y:23225927-T-A hg38:Y:21064041-T-A | ** | ||||||
hg19:Y:23225938-T-A hg38:Y:21064052-T-A | ** | ||||||
hg19:Y:23544963-C-A hg38:Y:21383077-C-A | ** | ||||||
hg19:Y:23609324-T-G hg38:Y:21447438-T-G | ** | ||||||
hg19:Y:23837585-C-A hg38:Y:21675699-C-A | ** | ||||||
hg19:Y:23875547-A-T hg38:Y:21713661-A-T | ** | ||||||
hg19:Y:23891932-G-T hg38:Y:21730046-G-T | ** | ||||||
hg19:Y:23891944-A-T hg38:Y:21730058-A-T | ** | ||||||
hg19:Y:23891963-A-T hg38:Y:21730077-A-T | ** | ||||||
hg19:Y:23891976-C-A hg38:Y:21730090-C-A | ** | ||||||
hg19:Y:23951718-T-C hg38:Y:21805571-T-C | ** | ||||||
hg19:Y:23953804-C-A hg38:Y:21807657-C-A | ** | ||||||
hg19:Y:23954130-A-C hg38:Y:21807983-A-C | ** | ||||||
hg19:Y:23997504-TG-T hg38:Y:21851357-TG-T | ** | ||||||
hg19:Y:24283792-G-T hg38:Y:22137645-G-T | P3_t1 | ** | |||||
hg19:Y:24283811-C-A hg38:Y:22137664-C-A | P3_t1 | ** | |||||
hg19:Y:24283816-A-C hg38:Y:22137669-A-C | P3_t1 | ** | |||||
hg19:Y:24283822-T-A hg38:Y:22137675-T-A | P3_t1 | ** | |||||
hg19:Y:24348505-G-T hg38:Y:22202358-G-T | P3_t1 | ** | |||||
hg19:Y:24348521-G-T hg38:Y:22202374-G-T | P3_t1 | ** | |||||
hg19:Y:24348525-G-T hg38:Y:22202378-G-T | P3_t1 | ** | |||||
hg19:Y:24348546-C-A hg38:Y:22202399-C-A | P3_t1 | ** | |||||
hg19:Y:24348559-G-T hg38:Y:22202412-G-T | P3_t1 | ** | |||||
hg19:Y:24348566-G-T hg38:Y:22202419-G-T | P3_t1 | ** | |||||
hg19:Y:24348586-G-T hg38:Y:22202439-G-T | P3_t1 | ** | |||||
hg19:Y:24378517-C-A hg38:Y:22232370-C-A | ** | ||||||
hg19:Y:24381301-A-T hg38:Y:22235154-A-T | ** | ||||||
hg19:Y:24385011-T-G hg38:Y:22238864-T-G | ** | ||||||
hg19:Y:24466056-C-A hg38:Y:22319909-C-A | ** | ||||||
hg19:Y:24577878-C-CACA hg38:Y:22431731-C-CACA | P3_t2 | 25×A | ** | ||||
hg19:Y:24930108-C-A hg38:Y:22783961-C-A | g1 | ** | |||||
hg19:Y:24930109-T-A hg38:Y:22783962-T-A | g1 | ** | |||||
hg19:Y:24930116-C-A hg38:Y:22783969-C-A | g1 | ** | |||||
hg19:Y:25849528-A-T hg38:Y:23703381-A-T | P1_Y1 | ** | |||||
hg19:Y:25849540-A-T hg38:Y:23703393-A-T | P1_Y1 | ** | |||||
hg19:Y:25849542-G-T hg38:Y:23703395-G-T | P1_Y1 | ** | |||||
hg19:Y:25849548-A-T hg38:Y:23703401-A-T | P1_Y1 | ** | |||||
hg19:Y:25849552-A-T hg38:Y:23703405-A-T | P1_Y1 | ** | |||||
hg19:Y:25999579-T-A hg38:Y:23853432-T-A | P1_Y1 | ** | |||||
hg19:Y:25999589-T-A hg38:Y:23853442-T-A | P1_Y1 | ** | |||||
hg19:Y:25999596-T-A hg38:Y:23853449-T-A | P1_Y1 | ** | |||||
hg19:Y:25999627-A-T hg38:Y:23853480-A-T | P1_Y1 | ** | |||||
hg19:Y:25999640-T-A hg38:Y:23853493-T-A | P1_Y1 | ** | |||||
hg19:Y:26010336-G-T hg38:Y:23864189-G-T | P1_Y1 | ** | |||||
hg19:Y:26010342-G-T hg38:Y:23864195-G-T | P1_Y1 | ** | |||||
hg19:Y:26010404-G-T hg38:Y:23864257-G-T | P1_Y1 | ** | |||||
hg19:Y:26010424-G-T hg38:Y:23864277-G-T | P1_Y1 | ** | |||||
hg19:Y:26029706-T-A hg38:Y:23883559-T-A | P1_Y1 | ** | |||||
hg19:Y:26029756-C-G hg38:Y:23883609-C-G | P1_Y1 | ** | |||||
hg19:Y:26029762-T-TA hg38:Y:23883615-T-TA | P1_Y1 | ** | |||||
hg19:Y:26231517-C-A hg38:Y:24085370-C-A | P1_Y1 | ** | |||||
hg19:Y:26231529-C-A hg38:Y:24085382-C-A | P1_Y1 | ** | |||||
hg19:Y:26231570-A-T hg38:Y:24085423-A-T | P1_Y1 | ** | |||||
hg19:Y:26231584-A-T hg38:Y:24085437-A-T | P1_Y1 | ** | |||||
hg19:Y:26730383-G-A hg38:Y:24584236-G-A | P1_g2 | ** | |||||
hg19:Y:27862446-T-G hg38:Y:25716299-T-G | P1_Y2 | ** | |||||
hg19:Y:28006407-G-T hg38:Y:25860260-G-T | P1_Y2 | ** | |||||
hg19:Y:28006412-T-A hg38:Y:25860265-T-A | P1_Y2 | ** | |||||
hg19:Y:28332435-G-T hg38:Y:26186288-G-T | P1_b4 | ** | |||||
hg19:Y:28478296-T-G hg38:Y:26332149-T-G | ** | ||||||
hg19:Y:28505482-C-A hg38:Y:26359335-C-A | ** | ||||||
hg19:Y:28553992-CAAAAAAA-C hg38:Y:26407845-CAAAAAAA-C | 28×A | ** | |||||
hg19:Y:28594257-A-C hg38:Y:26448110-A-C | ** | ||||||
hg19:Y:28594266-A-C hg38:Y:26448119-A-C | ** | ||||||
hg19:Y:28594298-T-G hg38:Y:26448151-T-G | ** | ||||||
hg19:Y:28602755-C-A hg38:Y:26456608-C-A | ** | ||||||
hg19:Y:28612331-T-C hg38:Y:26466184-T-C | ** | ||||||
hg19:Y:28621306-C-A hg38:Y:26475159-C-A | ** | ||||||
hg19:Y:28657626-C-A hg38:Y:26511479-C-A | ** | ||||||
hg19:Y:28766287-A-C hg38:Y:26620140-A-C | ** | ||||||
hg19:Y:28805852-T-A hg38:Y:26659705-T-A | ** | ||||||
hg19:Y:28805858-G-A hg38:Y:26659711-G-A | ** | ||||||
hg19:Y:28816054-T-A hg38:Y:26669907-T-A | ** | ||||||
hg38:Y:56852717-A-C | ** | ||||||
hg38:Y:56863672-C-A | ** | ||||||
hg38:Y2:20437-C-A | ** | ||||||
hg38:Y2:20454-A-T | ** | ||||||
hg38:Y2:20465-T-G | ** | ||||||
hg19:Y:15368979-C-A hg38:Y:13257099-C-A | *** | ||||||
hg38:Y:11643752-T-A | DYZ17 | *** | |||||
hg19:Y:10024258-G-GTC hg38:Y:10186649-G-GTC | *** | ||||||
hg19:Y:3967068-G-T hg38:Y:4099027-G-T | *** | ||||||
hg19:Y:7247648-C-A hg38:Y:7379607-C-A | *** | ||||||
hg19:Y:7775620-C-A hg38:Y:7907579-C-A | *** | ||||||
hg19:Y:7990903-C-A hg38:Y:8122862-C-A | *** | ||||||
hg19:Y:9942043-A-ATT hg38:Y:10104434-A-ATT | 28×T | *** | |||||
hg19:Y:9996635-C-A hg38:Y:10159026-C-A | *** | ||||||
hg38:Y:10781699-TC-T | *** | ||||||
hg38:Y:10796668-ATTCCATTC-A | *** | ||||||
hg38:Y:10838842-T-C | *** | ||||||
hg38:Y:10843721-C-A | *** | ||||||
hg38:Y:10888541-C-A | *** | ||||||
hg38:Y:10929551-C-T | *** | ||||||
hg38:Y:10934872-G-C,T | *** | ||||||
hg38:Y:10954916-C-A | *** | ||||||
hg19:Y:13446630-C-T hg38:Y:11290954-C-T | *** | ||||||
hg19:Y:13483328-C-G,T hg38:Y:11327652-C-G,T | *** | ||||||
hg38:Y:11672634-A-G | DYZ17 | *** | |||||
hg19:Y:14884698-GAAAAAAAAAAA-G,GA hg38:Y:12772764-GAAAAAAAAAAA-G,GA | 26×A | *** | |||||
hg19:Y:15542684-C-A hg38:Y:13430804-C-A | FT107785 | *** | |||||
hg19:Y:15604353-TC-T hg38:Y:13492473-TC-T | *** | ||||||
hg19:Y:17279764-ATCTGTAAT-A hg38:Y:15167884-ATCTGTAAT-A | *** | ||||||
hg19:Y:17714231-C-A hg38:Y:15602351-C-A | *** | ||||||
hg19:Y:19008127-C-A hg38:Y:16896247-C-A | *** | ||||||
hg19:Y:19378260-C-A hg38:Y:17266380-C-A | *** | ||||||
hg19:Y:21106005-T-C hg38:Y:18944119-T-C | *** | ||||||
hg19:Y:21189890-C-T hg38:Y:19028004-C-T | *** | ||||||
hg19:Y:21555341-C-A hg38:Y:19393455-C-A | *** | ||||||
hg19:Y:21971660-G-GAA hg38:Y:19809774-G-GAA | 11×A | *** | |||||
hg19:Y:22207402-C-A hg38:Y:20045516-C-A | *** | ||||||
hg19:Y:24550027-G-T hg38:Y:22403880-G-T | P3_t2 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 628119 | 9584702 | 7827747 | 7721783 |
Used in age calculations | 9584702 | 7827747 | 7721783 |
Counts of SNPs | 3 | 3 |
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