Wells
BigY2: B1256Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 B1256 |
|---|---|---|---|---|---|---|---|
| hg19:Y:28810502-G-T hg38:Y:26664355-G-T | A* | ||||||
| hg19:Y:22274537-C-G hg38:Y:20112651-C-G | DYZ19 | A* | |||||
| hg19:Y:22290929-T-A hg38:Y:20129043-T-A | DYZ19 | A* | |||||
| hg19:Y:22454283-C-T hg38:Y:20292397-C-T | DYZ19 | A* | |||||
| hg19:Y:26219013-A-G hg38:Y:24072866-A-G | P1_Y1 | A* | |||||
| hg19:Y:28817634-A-T hg38:Y:26671487-A-T | A* | ||||||
| hg19:Y:22256365-G-C hg38:Y:20094479-G-C | FGC8037 | DYZ19 | + | ||||
| hg19:Y:22436754-T-C hg38:Y:20274868-T-C | BY43803 | DYZ19 | + | ||||
| hg19:Y:22585713-G-A hg38:Y:20423827-G-A | A5444 | Y | Y | + | |||
| hg19:Y:22256379-A-G hg38:Y:20094493-A-G | BY46090 | DYZ19 | + | ||||
| hg19:Y:8566316-GACAC-G hg38:Y:8698275-GACAC-G | + | ||||||
| hg19:Y:9049923-G-C hg38:Y:9212314-G-C | BY77697 | Y | + | ||||
| hg19:Y:9854409-T-A hg38:Y:10016800-T-A | BY81482 | Y | Y | + | |||
| hg19:Y:14116225-G-A hg38:Y:11995519-G-A | BY93129 | Y | Y | + | |||
| hg19:Y:15526034-G-A hg38:Y:13414154-G-A | BY102247 | Y | Y | + | |||
| hg19:Y:15765010-G-A hg38:Y:13653130-G-A | BY103921 | Y | Y | + | |||
| hg19:Y:17178812-C-T hg38:Y:15066932-C-T | BY112844 | Y | Y | + | |||
| hg19:Y:18061930-T-A hg38:Y:15950050-T-A | BY119555 | Y | Y | + | |||
| hg19:Y:18981621-G-T hg38:Y:16869741-G-T | BY125232 | Y | Y | + | |||
| hg19:Y:21175717-T-A hg38:Y:19013831-T-A | BY130879 | Y | Y | + | |||
| hg19:Y:21176174-G-C hg38:Y:19014288-G-C | BY130887 | Y | Y | + | |||
| hg19:Y:21705840-GTCC-G hg38:Y:19543954-GTCC-G | + | ||||||
| hg19:Y:22133307-A-G hg38:Y:19971421-A-G | BY137890 | Y | Y | + | |||
| hg19:Y:22436753-G-A hg38:Y:20274867-G-A | BY43802 | DYZ19 | + | ||||
| hg19:Y:22470329-A-C hg38:Y:20308443-A-C | BY222398 | DYZ19 | + | ||||
| hg19:Y:22483423-T-A hg38:Y:20321537-T-A | BY224485 | DYZ19 | + | ||||
| hg19:Y:22318864-C-A hg38:Y:20156978-C-A | DYZ19 | * | |||||
| hg19:Y:15699702-C-A hg38:Y:13587822-C-A | ** | ||||||
| hg19:Y:3232159-T-C hg38:Y:3364118-T-C | FT316524 | ** | |||||
| hg19:Y:14630479-T-C hg38:Y:12518548-T-C | ** | ||||||
| hg38:Y:11017584-C-T | ** | ||||||
| hg19:Y:28794213-G-T hg38:Y:26648066-G-T | ** | ||||||
| hg19:Y:9945017-C-A hg38:Y:10107408-C-A | ** | ||||||
| hg19:Y:18382125-C-A hg38:Y:16270245-C-A | P6_Gap | ** | |||||
| hg38:Y:10867942-A-T | ** | ||||||
| hg19:Y:19041213-G-T hg38:Y:16929333-G-T | ** | ||||||
| hg19:Y:22949792-C-A hg38:Y:20787906-C-A | ** | ||||||
| hg19:Y:6246715-T-TC hg38:Y:6378674-T-TC | IR3_Dst | ** | |||||
| hg38:Y:10906150-G-T | ** | ||||||
| hg38:Y:10992252-AC-A | ** | ||||||
| hg38:Y:10992255-CCACT-C | ** | ||||||
| hg19:Y:3164749-C-A hg38:Y:3296708-C-A | ** | ||||||
| hg19:Y:2772825-C-A hg38:Y:2904784-C-A | ** | ||||||
| hg19:Y:2959823-A-T hg38:Y:3091782-A-T | ** | ||||||
| hg19:Y:2961430-C-A hg38:Y:3093389-C-A | ** | ||||||
| hg19:Y:2981265-A-T hg38:Y:3113224-A-T | ** | ||||||
| hg19:Y:3005627-C-A hg38:Y:3137586-C-A | ** | ||||||
| hg19:Y:3056406-G-T hg38:Y:3188365-G-T | ** | ||||||
| hg19:Y:3064906-T-G hg38:Y:3196865-T-G | ** | ||||||
| hg19:Y:3064930-C-G hg38:Y:3196889-C-G | ** | ||||||
| hg19:Y:3091573-G-T hg38:Y:3223532-G-T | FT6862 | ** | |||||
| hg19:Y:3274232-C-A hg38:Y:3406191-C-A | ** | ||||||
| hg19:Y:3506325-A-T hg38:Y:3638284-A-T | ** | ||||||
| hg19:Y:3535944-C-A hg38:Y:3667903-C-A | ** | ||||||
| hg19:Y:3627313-C-A hg38:Y:3759272-C-A | ** | ||||||
| hg19:Y:3727617-G-T hg38:Y:3859576-G-T | ** | ||||||
| hg19:Y:3797447-G-T hg38:Y:3929406-G-T | ** | ||||||
| hg19:Y:3846809-T-A hg38:Y:3978768-T-A | ** | ||||||
| hg19:Y:3846824-T-A hg38:Y:3978783-T-A | ** | ||||||
| hg19:Y:3846825-G-T hg38:Y:3978784-G-T | ** | ||||||
| hg19:Y:3990885-C-A hg38:Y:4122844-C-A | ** | ||||||
| hg19:Y:4073528-C-G hg38:Y:4205487-C-G | ** | ||||||
| hg19:Y:4079708-G-T hg38:Y:4211667-G-T | ** | ||||||
| hg19:Y:4114782-A-T hg38:Y:4246741-A-T | ** | ||||||
| hg19:Y:4139045-G-T hg38:Y:4271004-G-T | ** | ||||||
| hg19:Y:4153331-T-G hg38:Y:4285290-T-G | ** | ||||||
| hg19:Y:4208995-C-A hg38:Y:4340954-C-A | ** | ||||||
| hg19:Y:4230020-G-T hg38:Y:4361979-G-T | ** | ||||||
| hg19:Y:4295232-G-T hg38:Y:4427191-G-T | ** | ||||||
| hg19:Y:4366825-C-A hg38:Y:4498784-C-A | ** | ||||||
| hg19:Y:4418670-G-T hg38:Y:4550629-G-T | FT166086 | ** | |||||
| hg19:Y:4636724-G-T hg38:Y:4768683-G-T | ** | ||||||
| hg19:Y:4665849-T-C hg38:Y:4797808-T-C | ** | ||||||
| hg19:Y:4742999-G-T hg38:Y:4874958-G-T | ** | ||||||
| hg19:Y:4781326-C-T hg38:Y:4913285-C-T | ** | ||||||
| hg19:Y:5048574-C-A hg38:Y:5180533-C-A | ** | ||||||
| hg19:Y:5048624-C-A hg38:Y:5180583-C-A | ** | ||||||
| hg19:Y:5073539-C-TAA hg38:Y:5205498-C-TAA | ** | ||||||
| hg19:Y:5170610-C-A hg38:Y:5302569-C-A | ** | ||||||
| hg19:Y:5281173-C-T hg38:Y:5413132-C-T | ** | ||||||
| hg19:Y:5433518-G-T hg38:Y:5565477-G-T | ** | ||||||
| hg19:Y:5507711-G-T hg38:Y:5639670-G-T | ** | ||||||
| hg19:Y:5669174-C-A hg38:Y:5801133-C-A | ** | ||||||
| hg19:Y:5831947-G-T hg38:Y:5963906-G-T | ** | ||||||
| hg19:Y:5935478-C-A hg38:Y:6067437-C-A | ** | ||||||
| hg19:Y:6058388-G-T hg38:Y:6190347-G-T | ** | ||||||
| hg19:Y:6091184-G-T hg38:Y:6223143-G-T | ** | ||||||
| hg19:Y:6091193-G-T hg38:Y:6223152-G-T | ** | ||||||
| hg19:Y:6225084-A-T hg38:Y:6357043-A-T | IR3_Dst | ** | |||||
| hg19:Y:6401609-C-A hg38:Y:6533568-C-A | ** | ||||||
| hg19:Y:6543384-C-A hg38:Y:6675343-C-A | ** | ||||||
| hg19:Y:6578558-C-A hg38:Y:6710517-C-A | ** | ||||||
| hg19:Y:6621501-C-G hg38:Y:6753460-C-G | ** | ||||||
| hg19:Y:6693097-C-T hg38:Y:6825056-C-T | FGC10690 | ** | |||||
| hg19:Y:6722130-C-A hg38:Y:6854089-C-A | ** | ||||||
| hg19:Y:6731304-C-A hg38:Y:6863263-C-A | ** | ||||||
| hg19:Y:6756803-A-C hg38:Y:6888762-A-C | ** | ||||||
| hg19:Y:6819601-A-T hg38:Y:6951560-A-T | ** | ||||||
| hg19:Y:7028548-T-G hg38:Y:7160507-T-G | ** | ||||||
| hg19:Y:7028553-T-G hg38:Y:7160512-T-G | ** | ||||||
| hg19:Y:7132357-C-A hg38:Y:7264316-C-A | ** | ||||||
| hg19:Y:7142457-A-G hg38:Y:7274416-A-G | FT159499 | ** | |||||
| hg19:Y:7142808-C-A hg38:Y:7274767-C-A | ** | ||||||
| hg19:Y:7200739-C-A hg38:Y:7332698-C-A | ** | ||||||
| hg19:Y:7211237-C-A hg38:Y:7343196-C-A | ** | ||||||
| hg19:Y:7238050-T-C hg38:Y:7370009-T-C | ** | ||||||
| hg19:Y:7256378-G-C hg38:Y:7388337-G-C | ** | ||||||
| hg19:Y:7341503-T-A hg38:Y:7473462-T-A | ** | ||||||
| hg19:Y:7342101-C-A hg38:Y:7474060-C-A | ** | ||||||
| hg19:Y:7643032-C-A hg38:Y:7774991-C-A | ** | ||||||
| hg19:Y:7756883-C-A hg38:Y:7888842-C-A | ** | ||||||
| hg19:Y:7860157-C-A hg38:Y:7992116-C-A | ** | ||||||
| hg19:Y:8056333-G-T hg38:Y:8188292-G-T | ** | ||||||
| hg19:Y:8166890-T-G hg38:Y:8298849-T-G | ** | ||||||
| hg19:Y:8167845-C-A hg38:Y:8299804-C-A | ** | ||||||
| hg19:Y:8732298-C-A hg38:Y:8864257-C-A | ** | ||||||
| hg19:Y:8736625-T-G hg38:Y:8868584-T-G | ** | ||||||
| hg19:Y:8807532-T-A hg38:Y:8939491-T-A | ** | ||||||
| hg19:Y:8827279-G-T hg38:Y:8959238-G-T | ** | ||||||
| hg38:Y:9108102-G-A | ** | ||||||
| hg19:Y:9426679-C-A hg38:Y:9589070-C-A | ** | ||||||
| hg19:Y:9589894-A-T hg38:Y:9752285-A-T | IR3_Prx | ** | |||||
| hg19:Y:10033491-G-T hg38:Y:10195882-G-T | BY201976 | ** | |||||
| hg38:Y:10656873-C-A | ** | ||||||
| hg38:Y:10666965-G-T | ** | ||||||
| hg38:Y:10671250-C-A | ** | ||||||
| hg38:Y:10673295-CT-C | ** | ||||||
| hg38:Y:10684141-T-A | ** | ||||||
| hg38:Y:10755004-T-A | ** | ||||||
| hg38:Y:10755006-CAATTT-C | ** | ||||||
| hg38:Y:10755043-A-G | ** | ||||||
| hg38:Y:10755057-C-A | ** | ||||||
| hg38:Y:10765100-C-A | ** | ||||||
| hg38:Y:10775981-A-T | ** | ||||||
| hg38:Y:10775983-T-G | ** | ||||||
| hg38:Y:10777451-C-A | ** | ||||||
| hg38:Y:10781281-T-G | ** | ||||||
| hg38:Y:10783844-C-A | ** | ||||||
| hg38:Y:10792069-C-A | ** | ||||||
| hg38:Y:10794537-T-A | ** | ||||||
| hg38:Y:10796189-C-T | ** | ||||||
| hg38:Y:10797523-A-C | ** | ||||||
| hg38:Y:10797537-C-A | ** | ||||||
| hg38:Y:10797546-C-G | ** | ||||||
| hg38:Y:10797773-T-A | ** | ||||||
| hg38:Y:10797774-C-T | ** | ||||||
| hg38:Y:10803853-C-CTACAT | ** | ||||||
| hg38:Y:10805207-T-G | ** | ||||||
| hg38:Y:10806723-C-T | ** | ||||||
| hg38:Y:10808964-A-C | ** | ||||||
| hg38:Y:10808978-C-CGTACT | ** | ||||||
| hg38:Y:10809598-C-A | ** | ||||||
| hg38:Y:10825197-T-C | ** | ||||||
| hg38:Y:10826784-C-T | ** | ||||||
| hg38:Y:10843392-C-A | ** | ||||||
| hg38:Y:10848743-A-T | ** | ||||||
| hg38:Y:10849432-T-G | ** | ||||||
| hg38:Y:10851727-C-T | ** | ||||||
| hg38:Y:10851831-T-C | ** | ||||||
| hg38:Y:10857269-T-G | ** | ||||||
| hg38:Y:10857279-T-C | ** | ||||||
| hg38:Y:10857847-C-A | ** | ||||||
| hg38:Y:10864713-C-A | ** | ||||||
| hg38:Y:10864904-C-T | ** | ||||||
| hg38:Y:10866531-C-A | ** | ||||||
| hg38:Y:10868880-T-G | ** | ||||||
| hg38:Y:10872225-A-C | ** | ||||||
| hg38:Y:10872245-C-G | ** | ||||||
| hg38:Y:10872253-CTCCT-C | ** | ||||||
| hg38:Y:10872260-CT-C | ** | ||||||
| hg38:Y:10882134-C-A | ** | ||||||
| hg38:Y:10883860-T-C | ** | ||||||
| hg38:Y:10885222-C-A | ** | ||||||
| hg38:Y:10888562-C-A | FT435627 | ** | |||||
| hg38:Y:10892259-T-G | ** | ||||||
| hg38:Y:10892264-T-G | ** | ||||||
| hg38:Y:10893928-C-A | ** | ||||||
| hg38:Y:10906181-C-A | ** | ||||||
| hg38:Y:10916507-T-G | ** | ||||||
| hg38:Y:10916551-A-T | ** | ||||||
| hg38:Y:10936773-A-T | ** | ||||||
| hg38:Y:10936795-T-A | ** | ||||||
| hg38:Y:10937574-C-T | ** | ||||||
| hg38:Y:10937597-C-T | ** | ||||||
| hg38:Y:10937600-A-C | ** | ||||||
| hg38:Y:10937602-G-T | ** | ||||||
| hg38:Y:10939414-C-A | FT437396 | ** | |||||
| hg38:Y:10943860-C-A | ** | ||||||
| hg38:Y:10945101-C-A | ** | ||||||
| hg38:Y:10950411-C-A | ** | ||||||
| hg38:Y:10952814-C-A | ** | ||||||
| hg38:Y:10952967-C-A | ** | ||||||
| hg38:Y:10954885-C-A | ** | ||||||
| hg38:Y:10955497-A-ACT | ** | ||||||
| hg38:Y:10958835-C-T | ** | ||||||
| hg38:Y:10960768-C-A | ** | ||||||
| hg38:Y:10965370-A-C | ** | ||||||
| hg38:Y:10968781-A-G | ** | ||||||
| hg38:Y:10970998-C-A | ** | ||||||
| hg38:Y:10982460-C-A | ** | ||||||
| hg38:Y:10983460-C-T | ** | ||||||
| hg38:Y:10983465-A-T | ** | ||||||
| hg38:Y:10983508-T-G | ** | ||||||
| hg38:Y:10986322-C-G | ** | ||||||
| hg38:Y:10988690-C-A | ** | ||||||
| hg38:Y:10988964-C-A | ** | ||||||
| hg38:Y:10989547-T-G | ** | ||||||
| hg38:Y:10997999-C-A | ** | ||||||
| hg38:Y:11004417-T-TTCAAA | ** | ||||||
| hg38:Y:11004447-T-TTCCCC | ** | ||||||
| hg38:Y:11006441-C-A | ** | ||||||
| hg38:Y:11007082-C-A | ** | ||||||
| hg38:Y:11023228-T-G | ** | ||||||
| hg38:Y:11025693-C-A | ** | ||||||
| hg38:Y:11034194-C-A | ** | ||||||
| hg19:Y:13404801-C-T hg38:Y:11249125-C-T | ** | ||||||
| hg19:Y:13485552-C-A hg38:Y:11329876-C-A | ** | ||||||
| hg19:Y:13485571-A-T hg38:Y:11329895-A-T | ** | ||||||
| hg19:Y:13544918-T-A hg38:Y:11389242-T-A | ** | ||||||
| hg19:Y:13564484-C-A hg38:Y:11408808-C-A | ** | ||||||
| hg19:Y:13600870-T-C hg38:Y:11445194-T-C | ** | ||||||
| hg19:Y:13627374-C-A hg38:Y:11471698-C-A | ** | ||||||
| hg19:Y:13713801-A-G hg38:Y:11558125-A-G | DYZ17 | ** | |||||
| hg19:Y:13718500-G-T hg38:Y:11562824-G-T | DYZ17 | ** | |||||
| hg19:Y:13721044-A-T hg38:Y:11565368-A-T | DYZ17 | ** | |||||
| hg19:Y:13721049-A-T hg38:Y:11565373-A-T | DYZ17 | ** | |||||
| hg19:Y:13721057-G-T hg38:Y:11565381-G-T | DYZ17 | ** | |||||
| hg19:Y:13721061-G-T hg38:Y:11565385-G-T | DYZ17 | ** | |||||
| hg19:Y:13721072-G-T hg38:Y:11565396-G-T | DYZ17 | ** | |||||
| hg19:Y:13721076-C-T hg38:Y:11565400-C-T | DYZ17 | ** | |||||
| hg38:Y:11652608-T-G | DYZ17 | ** | |||||
| hg38:Y:11652611-A-C | DYZ17 | ** | |||||
| hg38:Y:11658974-A-T | DYZ17 | ** | |||||
| hg38:Y:11663935-C-A | DYZ17 | ** | |||||
| hg38:Y:11670751-C-A | DYZ17 | ** | |||||
| hg38:Y:11674132-A-C | DYZ17 | ** | |||||
| hg38:Y:11675236-T-G | DYZ17 | ** | |||||
| hg38:Y:11675243-A-C | DYZ17 | ** | |||||
| hg19:Y:13856330-A-ATGGGG hg38:Y:11735624-A-ATGGGG | DYZ17 | ** | |||||
| hg19:Y:13856349-A-ATCAACATGC hg38:Y:11735643-A-ATCAACATGC | DYZ17 | ** | |||||
| hg19:Y:13858033-A-C hg38:Y:11737327-A-C | DYZ17 | ** | |||||
| hg19:Y:13938731-AGCCAAGATGGT-A hg38:Y:11818025-AGCCAAGATGGT-A | ** | ||||||
| hg19:Y:13945366-C-A hg38:Y:11824660-C-A | ** | ||||||
| hg19:Y:13987143-G-T hg38:Y:11866437-G-T | ** | ||||||
| hg19:Y:14017534-C-A hg38:Y:11896828-C-A | ** | ||||||
| hg19:Y:14019499-A-T hg38:Y:11898793-A-T | ** | ||||||
| hg19:Y:14068919-G-T hg38:Y:11948213-G-T | ** | ||||||
| hg19:Y:14074166-C-A hg38:Y:11953460-C-A | ** | ||||||
| hg19:Y:14080033-CAG-C hg38:Y:11959327-CAG-C | ** | ||||||
| hg19:Y:14160315-T-G hg38:Y:12039609-T-G | ** | ||||||
| hg19:Y:14252190-C-A hg38:Y:12131484-C-A | ** | ||||||
| hg19:Y:14294126-C-A hg38:Y:12173420-C-A | ** | ||||||
| hg19:Y:14294161-A-C hg38:Y:12173455-A-C | ** | ||||||
| hg19:Y:14358366-T-G hg38:Y:12237661-T-G | ** | ||||||
| hg19:Y:14366542-C-A hg38:Y:12245837-C-A | ** | ||||||
| hg19:Y:14412979-T-G hg38:Y:12292276-T-G | ** | ||||||
| hg38:Y:12297447-A-ATG | ** | ||||||
| hg19:Y:14507737-C-T hg38:Y:12395942-C-T | ** | ||||||
| hg19:Y:14724557-G-A hg38:Y:12612625-G-A | ** | ||||||
| hg19:Y:14776962-C-A hg38:Y:12665031-C-A | ** | ||||||
| hg19:Y:14859061-C-A hg38:Y:12747127-C-A | ** | ||||||
| hg19:Y:15070445-T-A hg38:Y:12958536-T-A | ** | ||||||
| hg19:Y:15074644-C-A hg38:Y:12962734-C-A | ** | ||||||
| hg19:Y:15168969-G-A hg38:Y:13057055-G-A | FTB52170 | ** | |||||
| hg19:Y:15172780-A-T hg38:Y:13060866-A-T | ** | ||||||
| hg19:Y:15218746-T-C hg38:Y:13106832-T-C | ** | ||||||
| hg19:Y:15221747-G-A hg38:Y:13109833-G-A | ** | ||||||
| hg19:Y:15332235-A-T hg38:Y:13220353-A-T | ** | ||||||
| hg19:Y:15332237-C-A hg38:Y:13220355-C-A | ** | ||||||
| hg19:Y:15447079-G-A hg38:Y:13335199-G-A | ** | ||||||
| hg19:Y:15452174-G-T hg38:Y:13340294-G-T | ** | ||||||
| hg19:Y:15542150-A-C hg38:Y:13430270-A-C | ** | ||||||
| hg19:Y:15635955-C-T hg38:Y:13524075-C-T | ** | ||||||
| hg19:Y:15761028-C-A hg38:Y:13649148-C-A | ** | ||||||
| hg19:Y:15785976-C-A hg38:Y:13674096-C-A | ** | ||||||
| hg19:Y:15921956-G-T hg38:Y:13810076-G-T | ** | ||||||
| hg19:Y:15927023-T-A hg38:Y:13815143-T-A | ** | ||||||
| hg19:Y:15943720-C-A hg38:Y:13831840-C-A | ** | ||||||
| hg19:Y:16014879-C-A hg38:Y:13902999-C-A | ** | ||||||
| hg19:Y:16049014-C-A hg38:Y:13937134-C-A | ** | ||||||
| hg19:Y:16063215-C-CT hg38:Y:13951335-C-CT | ** | ||||||
| hg19:Y:16141885-G-C hg38:Y:14030005-G-C | P8_Dst | ** | |||||
| hg19:Y:16379242-C-A hg38:Y:14267362-C-A | ** | ||||||
| hg19:Y:16395606-G-T hg38:Y:14283726-G-T | ** | ||||||
| hg19:Y:16410197-C-T hg38:Y:14298317-C-T | ** | ||||||
| hg19:Y:16427226-G-T hg38:Y:14315346-G-T | ** | ||||||
| hg19:Y:16506033-A-T hg38:Y:14394153-A-T | ** | ||||||
| hg19:Y:16619802-G-T hg38:Y:14507922-G-T | ** | ||||||
| hg19:Y:16652168-G-T hg38:Y:14540288-G-T | ** | ||||||
| hg19:Y:16679461-G-T hg38:Y:14567581-G-T | ** | ||||||
| hg19:Y:16710250-A-G hg38:Y:14598370-A-G | ** | ||||||
| hg19:Y:16926778-C-A hg38:Y:14814898-C-A | ** | ||||||
| hg19:Y:16990159-G-T hg38:Y:14878279-G-T | ** | ||||||
| hg19:Y:17126541-A-T hg38:Y:15014661-A-T | ** | ||||||
| hg19:Y:17317535-G-A hg38:Y:15205655-G-A | ** | ||||||
| hg19:Y:17433985-A-C hg38:Y:15322105-A-C | ** | ||||||
| hg19:Y:17455060-G-T hg38:Y:15343180-G-T | ** | ||||||
| hg19:Y:17481427-C-A hg38:Y:15369547-C-A | ** | ||||||
| hg19:Y:17567586-C-A hg38:Y:15455706-C-A | ** | ||||||
| hg19:Y:17714790-C-A hg38:Y:15602910-C-A | ** | ||||||
| hg19:Y:18465509-A-T hg38:Y:16353629-A-T | P6_Dst | ** | |||||
| hg19:Y:18505645-C-A hg38:Y:16393765-C-A | P6_Dst | ** | |||||
| hg19:Y:18505671-G-T hg38:Y:16393791-G-T | P6_Dst | ** | |||||
| hg19:Y:18544993-C-A hg38:Y:16433113-C-A | ** | ||||||
| hg19:Y:18687631-C-A hg38:Y:16575751-C-A | ** | ||||||
| hg19:Y:18743267-A-T hg38:Y:16631387-A-T | ** | ||||||
| hg19:Y:18810726-A-C hg38:Y:16698846-A-C | ** | ||||||
| hg19:Y:18982585-AA-C hg38:Y:16870705-AA-C | ** | ||||||
| hg19:Y:18982596-A-C hg38:Y:16870716-A-C | ** | ||||||
| hg19:Y:18993392-A-G hg38:Y:16881512-A-G | ** | ||||||
| hg19:Y:19059932-A-G hg38:Y:16948052-A-G | FT154730 | ** | |||||
| hg19:Y:19416685-C-A hg38:Y:17304805-C-A | ** | ||||||
| hg19:Y:19449230-C-A hg38:Y:17337350-C-A | ** | ||||||
| hg19:Y:19517910-G-T hg38:Y:17406030-G-T | ** | ||||||
| hg19:Y:19529234-C-A hg38:Y:17417354-C-A | ** | ||||||
| hg19:Y:19671037-C-T hg38:Y:17559157-C-T | P5_Prx | ** | |||||
| hg19:Y:19740993-A-C hg38:Y:17629113-A-C | P5_Prx | ** | |||||
| hg19:Y:20022819-G-A hg38:Y:17910939-G-A | P5_Prx | ** | |||||
| hg19:Y:20215917-T-TGC hg38:Y:18054031-T-TGC | P5_Dst | ** | |||||
| hg19:Y:20215921-T-C hg38:Y:18054035-T-C | BY209054 | P5_Dst | ** | ||||
| hg19:Y:20215925-T-C hg38:Y:18054039-T-C | BY209055 | P5_Dst | ** | ||||
| hg19:Y:20693027-T-TA hg38:Y:18531141-T-TA | P4_Prx | ** | |||||
| hg19:Y:20726917-TTTT-G hg38:Y:18565031-TTTT-G | P4_Prx | ** | |||||
| hg19:Y:20785012-T-A hg38:Y:18623126-T-A | P4_Prx | ** | |||||
| hg19:Y:20789987-C-T hg38:Y:18628101-C-T | P4_Prx | ** | |||||
| hg19:Y:21023284-G-T hg38:Y:18861398-G-T | P4_Dst | ** | |||||
| hg19:Y:21023302-G-T hg38:Y:18861416-G-T | P4_Dst | ** | |||||
| hg19:Y:21023313-G-T hg38:Y:18861427-G-T | P4_Dst | ** | |||||
| hg19:Y:21023316-A-T hg38:Y:18861430-A-T | P4_Dst | ** | |||||
| hg19:Y:21042940-C-T hg38:Y:18881054-C-T | ** | ||||||
| hg19:Y:21127433-T-G hg38:Y:18965547-T-G | ** | ||||||
| hg19:Y:21244900-G-A hg38:Y:19083014-G-A | ** | ||||||
| hg19:Y:21324218-T-G hg38:Y:19162332-T-G | ** | ||||||
| hg19:Y:21352739-C-A hg38:Y:19190853-C-A | ** | ||||||
| hg19:Y:21363082-C-A hg38:Y:19201196-C-A | ** | ||||||
| hg19:Y:21386303-A-C hg38:Y:19224417-A-C | ** | ||||||
| hg19:Y:21464912-T-A hg38:Y:19303026-T-A | ** | ||||||
| hg19:Y:21502695-G-T hg38:Y:19340809-G-T | ** | ||||||
| hg19:Y:21543099-C-A hg38:Y:19381213-C-A | ** | ||||||
| hg19:Y:21551524-G-T hg38:Y:19389638-G-T | ** | ||||||
| hg19:Y:21602745-C-T hg38:Y:19440859-C-T | ** | ||||||
| hg19:Y:21969584-A-G hg38:Y:19807698-A-G | ** | ||||||
| hg19:Y:21996417-G-T hg38:Y:19834531-G-T | ** | ||||||
| hg19:Y:22134320-G-T hg38:Y:19972434-G-T | ** | ||||||
| hg19:Y:22182990-G-A hg38:Y:20021104-G-A | Z28439 | ** | |||||
| hg19:Y:22281808-C-T hg38:Y:20119922-C-T | DYZ19 | ** | |||||
| hg19:Y:22281812-A-C hg38:Y:20119926-A-C | DYZ19 | ** | |||||
| hg19:Y:22436752-A-T hg38:Y:20274866-A-T | BY218215 | DYZ19 | ** | ||||
| hg19:Y:22436771-C-T hg38:Y:20274885-C-T | BY218221 | DYZ19 | ** | ||||
| hg19:Y:22457419-G-A hg38:Y:20295533-G-A | DYZ19 | ** | |||||
| hg19:Y:22489553-G-C hg38:Y:20327667-G-C | DYZ19 | ** | |||||
| hg19:Y:22642971-C-A hg38:Y:20481085-C-A | ** | ||||||
| hg19:Y:22857645-C-A hg38:Y:20695759-C-A | ** | ||||||
| hg19:Y:22857774-C-A hg38:Y:20695888-C-A | ** | ||||||
| hg19:Y:22974203-A-C hg38:Y:20812317-A-C | ** | ||||||
| hg19:Y:23198694-C-A hg38:Y:21036808-C-A | ** | ||||||
| hg19:Y:23358930-T-A hg38:Y:21197044-T-A | ** | ||||||
| hg19:Y:23465647-G-T hg38:Y:21303761-G-T | ** | ||||||
| hg19:Y:23875206-T-A hg38:Y:21713320-T-A | ** | ||||||
| hg38:Y:21783858-T-G | ** | ||||||
| hg19:Y:24206170-G-T hg38:Y:22060023-G-T | P3_b1 | ** | |||||
| hg19:Y:24241286-A-AT hg38:Y:22095139-A-AT | P3_b1 | ** | |||||
| hg19:Y:24259707-G-A hg38:Y:22113560-G-A | P3_b1 | ** | |||||
| hg19:Y:24403841-G-T hg38:Y:22257694-G-T | ** | ||||||
| hg19:Y:24416951-T-A hg38:Y:22270804-T-A | ** | ||||||
| hg19:Y:24600693-T-A hg38:Y:22454546-T-A | P3_t2 | ** | |||||
| hg19:Y:24684825-A-T hg38:Y:22538678-A-T | P3_b2 | ** | |||||
| hg19:Y:25954037-T-G hg38:Y:23807890-T-G | P1_Y1 | ** | |||||
| hg19:Y:26001308-G-T hg38:Y:23855161-G-T | P1_Y1 | ** | |||||
| hg19:Y:26538793-T-G hg38:Y:24392646-T-G | P1_g2 | ** | |||||
| hg19:Y:27710844-T-A hg38:Y:25564697-T-A | P1_Y2 | ** | |||||
| hg19:Y:27710855-G-T hg38:Y:25564708-G-T | P1_Y2 | ** | |||||
| hg19:Y:27710869-T-A hg38:Y:25564722-T-A | P1_Y2 | ** | |||||
| hg19:Y:27710872-C-A hg38:Y:25564725-C-A | P1_Y2 | ** | |||||
| hg19:Y:27733748-G-C hg38:Y:25587601-G-C | P1_Y2 | ** | |||||
| hg19:Y:27861873-ACC-A hg38:Y:25715726-ACC-A | P1_Y2 | ** | |||||
| hg19:Y:28478281-T-G hg38:Y:26332134-T-G | ** | ||||||
| hg19:Y:28484776-A-C hg38:Y:26338629-A-C | ** | ||||||
| hg19:Y:28497274-C-A hg38:Y:26351127-C-A | ** | ||||||
| hg19:Y:28506183-C-A hg38:Y:26360036-C-A | ** | ||||||
| hg19:Y:28506259-C-A hg38:Y:26360112-C-A | ** | ||||||
| hg19:Y:28533739-C-A hg38:Y:26387592-C-A | ** | ||||||
| hg19:Y:28538399-A-C hg38:Y:26392252-A-C | ** | ||||||
| hg19:Y:28555382-C-A hg38:Y:26409235-C-A | ** | ||||||
| hg19:Y:28728398-C-A hg38:Y:26582251-C-A | ** | ||||||
| hg19:Y:28794220-G-A hg38:Y:26648073-G-A | ** | ||||||
| hg19:Y:28818203-A-ATTGT hg38:Y:26672056-A-ATTGT | ** | ||||||
| hg19:Y:28818204-A-AT hg38:Y:26672057-A-AT | ** | ||||||
| hg38:Y:56839008-G-C | ** | ||||||
| hg38:Y:56839215-A-G | ** | ||||||
| hg38:Y:56844249-G-T | ** | ||||||
| hg38:Y:56845107-T-A | ** | ||||||
| hg38:Y:56845125-G-A | ** | ||||||
| hg38:Y:56849929-G-C | ** | ||||||
| hg38:Y:56858645-G-T | ** | ||||||
| hg19:Y:21052567-T-TG hg38:Y:18890681-T-TG | 8×G | *** | |||||
| hg38:Y:10764180-T-A | *** | ||||||
| hg19:Y:4137674-C-G hg38:Y:4269633-C-G | *** | ||||||
| hg19:Y:7448486-G-T hg38:Y:7580445-G-T | IR1_L | *** | |||||
| hg19:Y:7902684-A-AT hg38:Y:8034643-A-AT | *** | ||||||
| hg19:Y:8061832-C-A hg38:Y:8193791-C-A | *** | ||||||
| hg38:Y:10653376-C-A | *** | ||||||
| hg38:Y:10821832-C-A | *** | ||||||
| hg38:Y:10841043-A-G | *** | ||||||
| hg38:Y:10946779-C-CTCCAT | *** | ||||||
| hg38:Y:11022944-T-A,C | *** | ||||||
| hg38:Y:11037319-C-A | *** | ||||||
| hg19:Y:13196013-C-A hg38:Y:11040337-C-A | *** | ||||||
| hg19:Y:13453454-TATTCCATTCCATTCCATTCCATTCCATTCCATTCC-T hg38:Y:11297778-TATTCCATTCCATTCCATTCCATTCCATTCCATTCC-T | 11×ATTCC | *** | |||||
| hg19:Y:14715577-A-G hg38:Y:12603644-A-G | *** | ||||||
| hg19:Y:15816277-C-A hg38:Y:13704397-C-A | *** | ||||||
| hg19:Y:16047887-A-G hg38:Y:13936007-A-G | *** | ||||||
| hg19:Y:16085841-C-A hg38:Y:13973961-C-A | *** | ||||||
| hg19:Y:16270921-G-T hg38:Y:14159041-G-T | *** | ||||||
| hg19:Y:16320282-A-G hg38:Y:14208402-A-G | *** | ||||||
| hg19:Y:17517145-C-A hg38:Y:15405265-C-A | *** | ||||||
| hg19:Y:21068497-C-A hg38:Y:18906611-C-A | *** | ||||||
| hg19:Y:21469243-C-CT,CTT hg38:Y:19307357-C-CT,CTT | 13×T | *** | |||||
| hg19:Y:22229868-A-C,G hg38:Y:20067982-A-C,G | DYZ19 | *** | |||||
| hg19:Y:22537624-T-C hg38:Y:20375738-T-C | *** | ||||||
| hg19:Y:23435178-TGGG-T hg38:Y:21273292-TGGG-T | *** | ||||||
| hg19:Y:23803383-G-T hg38:Y:21641497-G-T | *** | ||||||
| hg38:Y:56828225-G-T | *** | ||||||
| hg38:Y:56847496-C-T | *** | ||||||
| hg38:Y2:31825-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: B1256 | 9869654 | 8024059 | 7896162 |
| Used in age calculations | 9869654 | 8024059 | 7896162 |
| Counts of SNPs | 11 | 12 |
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