Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF41/S524 > FGC13023 > FGC13017 > FGC13014 > FGC13038

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
EFNHB
9949555-T-G 10111946-T-G FGC13020 Y+
4258654-G-A 4390613-G-A FGC13010 +
8556520-T-G 8688479-T-G FGC13018 YY+
24404730-CA-C 22258583-CA-C FGC13048 +
21796370-C-T 19634484-C-T FGC13041 Y+
8245241-G-T 8377200-G-T FGC13016 YY+
8210615-G-A 8342574-G-A FGC13015 YY+
15774960-A-G 13663080-A-G FGC13027 Y+
22171750-C-T 20009864-C-T FGC13042 Y+
17097352-T-C 14985472-T-C FGC13032 Y+
14507935-C-G 12396140-C-G FGC13025 Y+
17056577-G-A 14944697-G-A FGC13031 YY+
13546943-G-C 11391267-G-C FGC13021 +
14247915-A-G 12127209-A-G FGC13022 YY+
19103628-C-T 16991748-C-T FGC13035 YY+
3202423-C-T 3334382-C-T FGC13009 +
14894899-GT-G 12782965-GT-G FGC13047 +
16310857-G-T 14198977-G-T FGC13028 YY*
21418308-A-T 19256422-A-T FGC13039 Y*
5517608-C-T 5649567-C-T FGC13013 *
5232763-T-G 5364722-T-G FGC13012 *
21221987-A-T 19060101-A-T FGC13037 YY*
16263713-G-A 14151833-G-A FGC13008 YY*
4324374-C-A 4456333-C-A FGC13011 *
16889914-TATAAATAAATAA-T 14778034-TATAAATAAATAA-T 11×ATAA**
13559179-C-T 11403503-C-T **
13380191-A-G 11224515-A-G **
13842412-A-G 11721706-A-G **
17062854-A-G 14950974-A-G **
16026117-A-ACAAAAATTAATT 13914237-A-ACAAAAATTAATT **
13606826-T-G 11451150-T-G FGC11638 **
6902265-A-T 7034224-A-T **
18055260-A-T 15943380-A-T **
13638006-A-T 11482330-A-T **
13700135-G-T 11544459-G-T **
6120273-A-G 6252232-A-G **
13387841-G-T 11232165-G-T **
4682288-A-G 4814247-A-G YFS032810 **
15408419-G-T 13296539-G-T **
14085737-A-G 11965031-A-G **
14156330-C-A 12035624-C-A **
13842405-C-A 11721699-C-A **
4078919-C-T 4210878-C-T **
2791581-T-C 2923540-T-C **
2678956-C-T 2810915-C-T **
2678823-G-T 2810782-G-T **
2656991-G-A 2788950-G-A **
14414768-A-T 12294065-A-T Z28555 **
14514732-C-G 12402937-C-G **
15320649-AGAG-A 13208755-AGAG-A **
14777862-C-T 12665931-C-T Y40654 **
15789024-T-A 13677144-T-A **
15808052-A-G 13696172-A-G **
5202332-T-C 5334291-T-C **
5705562-C-T 5837521-C-T **
18878284-A-T 16766404-A-T **
6005104-A-T 6137063-A-T **
6015617-G-A 6147576-G-A **
6062273-G-A 6194232-G-A **
4272991-TTG-T 4404950-TTG-T 11×TG**
18579854-G-C 16467974-G-C **
7131882-G-T 7263841-G-T **
13842421-T-C 11721715-T-C **
22317949-A-T 20156063-A-T DYZ19 **
22360164-C-CCTCG 20198278-C-CCTCG DYZ19 **
13205432-G-A 11049756-G-A **
13222929-A-G 11067253-A-G **
22446786-G-T 20284900-G-T DYZ19 **
13509288-C-T 11353612-C-T **
13514719-A-T 11359043-A-T **
21886954-A-T 19725068-A-T **
19040024-C-T 16928144-C-T **
7422798-G-T 7554757-G-T **
28336668-C-CAAAAAA 26190521-C-CAAAAAA P1_b4 31×A**
13324804-C-A 11169128-C-A **
58832672-C-A 56758199-G-T ***
58830813-C-A 56760058-G-T ***
58830815-A-T 56760056-T-A ***
27590802-T-C 25444655-T-C P1_Y2 ***
58830820-A-T 56760051-T-A ***
27440388-G-T 25294241-G-T P1_Y2 ***
27416569-T-C 25270422-T-C P1_g3 ***
27206948-A-T 25060801-A-T P1_g3 ***
26951142-T-C 24804995-T-C P1_r3 ***
26498621-A-G 24352474-A-G FGC33802 P1_Y1 ***
58830822-G-T 56760049-C-A ***
58830823-A-C 56760048-T-G ***
58830825-A-T 56760046-T-A ***
26446549-C-T 24300402-C-T P1_Y1 ***
26313393-G-T 24167246-G-T P1_Y1 ***
58832662-C-T 56758209-G-A ***
58832663-C-T 56758208-G-A ***
58833084-T-A 56757787-A-T ***
27590829-G-A 25444682-G-A P1_Y2 ***
58832664-G-T 56758207-C-A ***
58832670-T-G 56758201-A-C ***
58833064-A-T 56757807-T-A ***
58832671-T-A 56758200-A-T ***
58832695-T-G 56758176-A-C ***
26446522-T-A 24300375-T-A P1_Y1 ***
27910557-C-T 25764410-C-T P1_Y2 ***
58830791-T-A 56760080-A-T ***
27910492-A-T 25764345-A-T P1_Y2 ***
27910590-A-G 25764443-A-G P1_Y2 ***
27910598-T-C 25764451-T-C P1_Y2 ***
27910605-G-T 25764458-G-T P1_Y2 ***
27910650-G-T 25764503-G-T P1_Y2 ***
27917708-C-A 25771561-C-A P1_Y2 ***
27917712-A-C 25771565-A-C P1_Y2 ***
27910504-C-T 25764357-C-T P1_Y2 ***
27910501-A-G 25764354-A-G P1_Y2 ***
28047441-T-C 25901294-T-C P1_Y2 ***
28047466-C-A 25901319-C-A P1_Y2 ***
28048396-G-A 25902249-G-A P1_Y2 ***
28048420-T-A 25902273-T-A P1_Y2 ***
27910494-C-T 25764347-C-T P1_Y2 ***
28404911-T-G 26258764-T-G P1_gr2 ***
27793053-C-T 25646906-C-T P1_Y2 ***
58830783-C-T 56760088-G-A ***
27791983-T-G 25645836-T-G P1_Y2 ***
27590877-C-G 25444730-C-G P1_Y2 ***
28551375-C-T 26405228-C-T ***
28701173-C-T 26555026-C-T ***
28802755-C-T 26656608-C-T ***
28818223-A-C 26672076-A-C ***
58823062-A-C 56767809-T-G ***
58825331-T-A 56765540-A-T ***
27590848-T-A 25444701-T-A P1_Y2 ***
58830773-G-C 56760098-C-G ***
27590847-T-A 25444700-T-A P1_Y2 ***
27590836-C-T 25444689-C-T P1_Y2 ***
27910505-A-G 25764358-A-G P1_Y2 ***
27590834-T-A 25444687-T-A P1_Y2 ***
58830774-C-T 56760097-G-A ***
58847176-C-G 56743695-G-C ***
26170509-A-G 24024362-A-G P1_Y1 ***
22369634-T-A 20207748-T-A DYZ19 ***
22360018-G-T 20198132-G-T DYZ19 ***
22360028-G-T 20198142-G-T DYZ19 ***
22360070-T-C 20198184-T-C DYZ19 ***
22361232-A-G 20199346-A-G DYZ19 ***
22361254-A-T 20199368-A-T DYZ19 ***
22366613-T-A 20204727-T-A DYZ19 ***
22367518-T-A 20205632-T-A DYZ19 ***
22367929-C-T 20206043-C-T DYZ19 ***
22495929-A-T 20334043-A-T DYZ19 ***
22358754-A-G 20196868-A-G DYZ19 ***
22498839-T-C 20336953-T-C DYZ19 ***
22504825-A-T 20342939-A-T DYZ19 ***
22531392-C-A 20369506-C-A ***
22756819-A-G 20594933-A-G ***
22877443-A-G 20715557-A-G ***
22950217-C-G 20788331-C-G ***
23100545-C-T 20938659-C-T ***
23100561-A-T 20938675-A-T ***
22358759-G-C 20196873-G-C DYZ19 ***
22358537-C-T 20196651-C-T DYZ19 ***
23722329-T-C 21560443-T-C ***
22343010-C-T 20181124-C-T DYZ19 ***
22308995-G-T 20147109-G-T DYZ19 ***
22309006-A-C 20147120-A-C DYZ19 ***
22309120-G-T 20147234-G-T DYZ19 ***
22309142-A-C 20147256-A-C DYZ19 ***
22309189-T-A 20147303-T-A DYZ19 ***
22327307-T-A 20165421-T-A DYZ19 ***
22342838-G-T 20180952-G-T DYZ19 ***
22342882-T-C 20180996-T-C DYZ19 ***
22343043-G-A 20181157-G-A DYZ19 ***
22358536-T-G 20196650-T-G DYZ19 ***
22343168-G-A 20181282-G-A DYZ19 ***
22347125-C-T 20185239-C-T DYZ19 ***
22347137-C-A 20185251-C-A DYZ19 ***
22347141-G-T 20185255-G-T DYZ19 ***
22347145-C-A 20185259-C-A DYZ19 ***
22352988-G-T 20191102-G-T DYZ19 ***
22352993-T-G 20191107-T-G DYZ19 ***
22355093-A-T 20193207-A-T DYZ19 ***
22355162-T-G 20193276-T-G DYZ19 ***
23316010-A-T 21154124-A-T ***
23722332-C-G 21560446-C-G ***
26158109-G-T 24011962-G-T P1_Y1 ***
25972941-T-A 23826794-T-A P1_Y1 ***
25933300-A-G 23787153-A-G P1_Y1 ***
25955949-T-A 23809802-T-A P1_Y1 ***
25955950-T-A 23809803-T-A P1_Y1 ***
25955970-G-A 23809823-G-A P1_Y1 ***
25972906-C-T 23826759-C-T P1_Y1 ***
25972927-T-A 23826780-T-A P1_Y1 ***
25972935-T-A 23826788-T-A P1_Y1 ***
25972936-C-A 23826789-C-A P1_Y1 ***
25972950-C-A 23826803-C-A P1_Y1 ***
25888412-C-T 23742265-C-T P1_Y1 ***
25985053-A-C 23838906-A-C P1_Y1 ***
25985085-T-A 23838938-T-A P1_Y1 ***
58833143-A-G 56757728-T-C ***
25985087-T-A 23838940-T-A P1_Y1 ***
25985094-A-T 23838947-A-T P1_Y1 ***
25985099-G-A 23838952-G-A P1_Y1 ***
26158106-G-T 24011959-G-T P1_Y1 ***
26158108-G-T 24011961-G-T P1_Y1 ***
25933273-A-T 23787126-A-T P1_Y1 ***
25888242-A-G 23742095-A-G P1_Y1 ***
23722336-A-G 21560450-A-G ***
24686349-G-T 22540202-G-T P3_b2 ***
23722360-C-G 21560474-C-G ***
23722370-G-T 21560484-G-T ***
23726694-T-A 21564808-T-A ***
24280348-G-A 22134201-G-A P3_t1 ***
24280349-G-A 22134202-G-A P3_t1 ***
24280355-G-A 22134208-G-A P3_t1 ***
24280378-A-G 22134231-A-G P3_t1 ***
24351868-A-T 22205721-A-T P3_t1 ***
25444410-C-T 23298263-C-T P2_r2 32×T***
25888238-A-T 23742091-A-T P1_Y1 ***
25531078-G-T 23384931-G-T P1_gr1 ***
25562436-T-C 23416289-T-C P1_gr1 ***
25618313-C-T 23472166-C-T P1_gr1 ***
25618327-A-C 23472180-A-C P1_gr1 ***
25618364-C-T 23472217-C-T P1_gr1 ***
25820667-G-A 23674520-G-A P1_b3 ***
25820686-T-G 23674539-T-G P1_b3 ***
25845359-G-T 23699212-G-T P1_b3 ***
25888225-A-T 23742078-A-T P1_Y1 ***
25985086-G-A 23838939-G-A P1_Y1 ***
58848554-T-A 56742317-A-T ***
58833743-G-A 56757128-C-T ***
19071328-CCACAGG-TCGCTT 16959448-CCACAGG-TCGCTT ***
13868476-GACTCA-G 11747770-GACTCA-G ***
13944051-CAAAAAAAAAAA-C 11823345-CAAAAAAAAAAA-C 22×A***
14373441-ACCT-CCCC 12252737-ACCT-CCCC ***
14491216-TGG-AACA ***
15947950-TCT-ATC 13836070-TCT-ATC ***
16345138-TTCT-C 14233258-TTCT-C ***
17274959-TAGAC-CAGAT 15163079-TAGAC-CAGAT ***
18511195-CA-C 16399315-CA-C P6_Dst 30×A***
20051704-TTTGTAAATCA-ATAT 17939824-TTTGTAAATCA-ATAT P5_Prx ***
13842428-TAAAGTAT-GAA 11721722-TAAAGTAT-GAA ***
20051718-TTCCAT-GTG 17939838-TTCCAT-GTG P5_Prx ***
20051728-ATTCCCTTT-A 17939848-ATTCCCTTT-A P5_Prx ***
20051739-TTTTAT-AA 17939859-TTTTAT-AA P5_Prx ***
20051753-GGTTACACAAAGATGA-CATTCTTTT 17939873-GGTTACACAAAGATGA-CATTCTTTT P5_Prx ***
20574943-TG-T 18413057-TG-T P5_Dst ***
21318477-CAAAAAAA-C 19156591-CAAAAAAA-C 19×A***
22234883-TGCCAGAT-AGCCCGAA 20072997-TGCCAGAT-AGCCCGAA DYZ19 ***
22234895-GAAAC-AAAAT 20073009-GAAAC-AAAAT DYZ19 ***
22235089-ACAAGTC-CCGATCT 20073203-ACAAGTC-CCGATCT DYZ19 ***
13842447-TGACTCAAAAGG-GGAGAGT 11721741-TGACTCAAAAGG-GGAGAGT ***
13842412-AGAAAAG-GGAACA 11721706-AGAAAAG-GGAACA ***
22283376-A-ATCT 20121490-A-ATCT DYZ19 ***
13483605-CTGGGTGT-ATGAGTGA 11327929-CTGGGTGT-ATGAGTGA ***
13463725-CCCG-ACCA 11308049-CCCG-ACCA ***
13467627-CAATGTC-AAATT 11311951-CAATGTC-AAATT ***
13468075-CCTGGGTTA-ACTGTGTGG 11312399-CCTGGGTTA-ACTGTGTGG ***
13468996-TG-T 11313320-TG-T ***
13474821-CCCA-TCCAG 11319145-CCCA-TCCAG ***
13476860-TGCT-CGCG 11321184-TGCT-CGCG ***
13480159-GTC-CTT 11324483-GTC-CTT ***
13480874-TG-AA 11325198-TG-AA ***
13488969-GGCC-TGTG 11333293-GGCC-TGTG ***
13839977-CATC-AATG 11719271-CATC-AATG ***
13526566-AAT-CAA 11370890-AAT-CAA ***
13669607-GCCCAAAATATAATTT-G 11513931-GCCCAAAATATAATTT-G ***
13669626-AGAAAC-CGAATG 11513950-AGAAAC-CGAATG ***
13669638-ACTCAAAA-CATC 11513962-ACTCAAAA-CATC ***
13669661-TC-GA 11513985-TC-GA ***
13725324-CTAAATGG-TTGAATTA 11569648-CTAAATGG-TTGAATTA ***
13740737-GG-TC 11585061-GG-TC ***
13832600-CCTAAATTTTC-G 11711894-CCTAAATTTTC-G ***
13832630-CTCAAAC-GTGGAAT 11711924-CTCAAAC-GTGGAAT ***
22244924-G-GA 20083038-G-GA DYZ19 ***
22317949-AA-TC 20156063-AA-TC DYZ19 ***
13448853-ACAG-CCAT 11293177-ACAG-CCAT ***
58872356-ATTTCC-T 56718510-GGAAAT-A ***
58847150-CAGTG-TAATA 56743717-CACTG-TATTA ***
58847166-AGTCTCTTCAC-A 56743694-AGTGAAGAGAC-A ***
58859211-CCATAGCAT-GCACTGCAC 56731652-ATGCTATGG-GTGCAGTGC ***
58867453-TTCG-ATCC 56723415-CGAA-GGAT ***
58870594-GCCACCCA-TCCGATCT 56720270-TGGGTGGC-AGATCGGA ***
58872307-ATTG-TTTC 56718561-CAAT-GAAA ***
58872322-AT-TA 56718548-AT-TA ***
58872337-GTGCTATTCAA-ATTCGATTTAG 56718524-TTGAATAGCAC-CTAAATCGAAT ***
58872365-TAA-CAC 56718504-TTA-GTG ***
58843776-GTACGATTCC-ATTGGAGTCA 56747086-GGAATCGTAC-TGACTCCAAT ***
58879613-CCATTAAAGTTCATTA-ACACTACATTCCCTTC 56711243-TAATGAACTTTAATGG-GAAGGGAATGTAGTGT ***
58889911-GACTCT-CATTAG 56700955-AGAGTC-CTAATG ***
58890422-GTTCG-ATTCC 56700445-CGAAC-GGAAT ***
58903523-ATTCC-TTGCG 56687344-GGAAT-CGCAA ***
58903877-CATTCCTTTCCATTAA-C 56686978-ATTAATGGAAAGGAAT-A ***
58907250-TATCA-GATCT 56683617-TGATA-AGATC ***
58909147-CTCGAA-TTCCAT 56681719-TTCGAG-ATGGAA ***
58915687-ATTCCATTA-GTTTGATTC 56675176-TAATGGAAT-GAATCAAAC ***
58915718-TTCCT-GTCCA 56675149-AGGAA-TGGAC ***
58846118-GCTTTCCAG-CCAATCCCT 56744745-CTGGAAAGC-AGGGATTGG ***
58843740-AT-CC 56747130-AT-GG ***
22332932-GTG-ATC 20171046-GTG-ATC DYZ19 ***
27997643-GAAA-G 25851496-GAAA-G P1_Y2 16×A***
22360028-GAGTTTCTTCC-TTGTGTCCTCG 20198142-GAGTTTCTTCC-TTGTGTCCTCG DYZ19 ***
22361254-AGT-TGA 20199368-AGT-TGA DYZ19 ***
24408991-ACCCC-A 22262844-ACCCC-A 14×C***
26170515-AGAAGAG-GGAA 24024368-AGAAGAG-GGAA P1_Y1 ***
26446472-GTGAGATGAA-TCAG 24300325-GTGAGATGAA-TCAG P1_Y1 ***
26446485-GCTACCTGTGATGGAA-AGGG 24300338-GCTACCTGTGATGGAA-AGGG P1_Y1 ***
26446507-AAATCACCCGTCTTCTGTGTCGCTCATGCTGGG-GAATGGTTCAATATACACA 24300360-AAATCACCCGTCTTCTGTGTCGCTCATGCTGGG-GAATGGTTCAATATACACA P1_Y1 ***
26446542-CTG-TCAA 24300395-CTG-TCAA P1_Y1 ***
27791964-TTCTT-GTCTC 25645817-TTCTT-GTCTC P1_Y2 ***
28117269-C-CA 25971122-C-CA P1_b4 25×A***
58843724-CT-TTG 56747146-AG-CAA ***
28503399-C-CA 26357252-C-CA 19×A***
28799145-AAAGC-A 26652998-AAAGC-A ***
58824631-TTT-AAG 56766238-AAA-CTT ***
58835705-CTCC-TTCA 56755163-GGAG-TGAA ***
58843627-TTCCTTTCCATTCCAGCC-GTCCATTGCTTTCGAGTG 56747227-GGCTGGAATGGAAAGGAA-CACTCGAAAGCAATGGAC ***
58843656-ATTCCATTCCT-GTGGCTGTCCA 56747205-AGGAATGGAAT-TGGACAGCCAC ***
58843679-TCATTAG-GAATTCC 56747186-CTAATGA-GGAATTC ***
58843693-TGC-ACG 56747176-GCA-CGT ***
58843720-CG-C 56747149-AC-A ***
13460231-CTG-ATT 11304555-CTG-ATT ***
13445921-A-AC 11290245-A-AC ***
58833773-A-C 56757098-T-G ***
58890416-G-C 56700455-C-G ***
58866260-G-T 56724611-C-A ***
58866944-C-G 56723927-G-C ***
58867446-G-C 56723425-C-G ***
58872317-A-G 56718554-T-C ***
58872398-T-G 56718473-A-C ***
58879608-A-C 56711263-T-G ***
58882554-G-A 56708317-C-T ***
58889913-C-T 56700958-G-A ***
58898189-C-G 56692682-G-C ***
58865713-C-T 56725158-G-A ***
58898203-G-C 56692668-C-G ***
58898206-C-A 56692665-G-T ***
58903481-T-G 56687390-A-C ***
58903509-T-A 56687362-A-T ***
58903523-A-T 56687348-T-A ***
58903536-C-A 56687335-G-T ***
58903542-C-G 56687329-G-C ***
58903548-A-T 56687323-T-A ***
58909162-T-C 56681709-A-G ***
58866259-A-T 56724612-T-A ***
58864068-G-A 56726803-C-T ***
58909169-A-T 56681702-T-A ***
58844285-G-T 56746586-C-A ***
58836498-C-A 56754373-G-T ***
58836968-C-A 56753903-G-T ***
58840663-A-C 56750208-T-G ***
58840970-A-C 56749901-T-G ***
58843194-C-G 56747677-G-C ***
58843240-G-C 56747631-C-G ***
58843612-T-G 56747259-A-C ***
58843671-T-A 56747200-A-T ***
58844332-T-A 56746539-A-T ***
58864063-A-C 56726808-T-G ***
58844346-A-C 56746525-T-G ***
58845668-C-T 56745203-G-A ***
58847180-G-C 56743691-C-G ***
58847217-G-T 56743654-C-A ***
22292392-A-C 20130506-A-C DYZ19 ***
58848569-C-A 56742302-G-T ***
58848576-A-T 56742295-T-A ***
58848578-G-T 56742293-C-A ***
58848982-G-A 56741889-C-T ***
58909168-G-T 56681703-C-A ***
58909175-C-A 56681696-G-T ***
13420304-TT-GG 11264628-TT-GG ***
10016655-ACTC-GCTG 10179046-ACTC-GCTG ***
7179734-GTTTTTTTT-G 7311693-GTTTTTTTT-G 25×T***
9350168-TGC-AG 9512559-TGC-AG ***
9350173-AT-CG 9512564-AT-CG ***
9416727-CTTTG-TTTTT 9579118-CTTTG-TTTTT ***
9930429-GGGTTGT-TTTGG 10092820-GGGTTGT-TTTGG ***
9930449-TAG-AAA 10092840-TAG-AAA ***
9962148-GCGTT-ACGCC 10124539-GCGTT-ACGCC ***
9984069-ACCA-GCTG 10146460-ACCA-GCTG ***
10028176-GACTA-AACTG 10190567-GACTA-AACTG ***
6638477-TT-AA 6770436-TT-AA ***
10037728-ATTG-GTTC 10200119-ATTG-GTTC ***
10066798-ATA-GTC 10229189-ATA-GTC ***
13141169-TTTCCGTTG-ATTC 10630655-TTTCCGTTG-ATTC ***
13203955-CATCATT-GATGATA 11048279-CATCATT-GATGATA ***
13233319-GAAAA-G 11077643-GAAAA-G 17×A***
13256041-GGCGTT-AGCG 11100365-GGCGTT-AGCG ***
13257678-GCACT-ACAC 11102002-GCACT-ACAC ***
13292259-CGG-TA 11136583-CGG-TA ***
13380188-GAAA-AAAG 11224512-GAAA-AAAG ***
6778742-CGCGCTCGG-TCCGATCT 6910701-CGCGCTCGG-TCCGATCT ***
6638472-CTTT-ATCG 6770431-CTTT-ATCG ***
58912304-T-A 56678567-A-T ***
13465253-AG-CA 11309577-AG-CA ***
58915690-C-T 56675181-G-A ***
58916651-C-T 56674220-G-A ***
22885133-T-TTA 20723247-T-TTA 10×TA***
13489029-TGCG-CGCA 11333353-TGCG-CGCA ***
13480008-CA-TG 11324332-CA-TG ***
13262766-CCCT-TGCC 11107090-CCCT-TGCC ***
17281988-AGAT-A 15170108-AGAT-A ***
19138207-AAT-A 17026327-AAT-A ***
19138189-A-AAT 17026309-A-AAT ***
13467643-AAAAGCCTAGAGAATA-CAGTGATTATAAAAGT 11311967-AAAAGCCTAGAGAATA-CAGTGATTATAAAAGT ***
6457484-CTT-C 6589443-CTT-C 17×T***
15264727-ATT-A 13152817-ATT-A ***
5786608-C-CA 5918567-C-CA 20×A***
3253829-CAA-C 3385788-CAA-C 18×A***
3353239-TAC-AG 3485198-TAC-AG ***
4425038-ATT-A 4556997-ATT-A 13×T***
4439933-GCTTCACTCCTGAGGGC-G 4571892-GCTTCACTCCTGAGGGC-G ***
4682277-G-GA 4814236-G-GA ***
4682280-ACAA-TCGG 4814239-ACAA-TCGG ***
5785698-GCAC-CCAA 5917657-GCAC-CCAA ***
22292393-A-T 20130507-A-T DYZ19 ***
20533408-A-C 18371522-A-C P5_Dst ***
22292384-G-T 20130498-G-T DYZ19 ***
3167229-A-G 3299188-A-G ***
22273685-C-A 20111799-C-A DYZ19 ***
58843735-G-C 56747136-C-G ***
22756974-T-C 20595088-T-C ***
22457192-G-T 20295306-G-T DYZ19 ***
2803666-C-T 2935625-C-T ***
2925677-G-A 3057636-G-A ***
3086506-G-A 3218465-G-A ***
3167242-C-A 3299201-C-A ***
13519570-A-G 11363894-A-G ***
3353243-A-T 3485202-A-T ***
3353245-C-G 3485204-C-G ***
3695722-A-T 3827681-A-T ***
3923135-A-G 4055094-A-G ***
4149311-T-C 4281270-T-C ***
4229043-G-T 4361002-G-T ***
4315447-C-T 4447406-C-T ***
4343698-T-C 4475657-T-C ***
58838711-A-T 56752160-T-A ***
13440531-G-A 11284855-G-A ***
4400268-A-G 4532227-A-G ***
10061650-C-T 10224041-C-T ***
13483805-G-T 11328129-G-T ***
9930387-A-G 10092778-A-G ***
9931259-G-A 10093650-G-A ***
13389826-C-T 11234150-C-T ***
9930380-A-G 10092771-A-G ***
10061632-C-A 10224023-C-A ***
10066779-T-A 10229170-T-A ***
13477030-T-G 11321354-T-G ***
13475383-A-T 11319707-A-T ***
13475419-A-G 11319743-A-G ***
13515526-T-C 11359850-T-C ***
13475380-T-G 11319704-T-G ***
58828489-G-C 56762382-C-G ***
13477028-T-G 11321352-T-G ***
13411449-A-G 11255773-A-G ***
9930397-T-G 10092788-T-G ***
58870181-G-T 56720690-C-A ***
13329054-C-T 11173378-C-T ***
4361669-T-C 4493628-T-C ***
4604211-C-T 4736170-C-T ***
13531777-C-A 11376101-C-A ***
8174188-C-T 8306147-C-T ***
7394152-C-A 7526111-C-A ***
7394156-G-A 7526115-G-A ***
7395177-A-C 7527136-A-C ***
7580039-C-T 7711998-C-T ***
8005062-T-C 8137021-T-C ***
8005623-T-C 8137582-T-C ***
8005624-A-T 8137583-A-T ***
8901170-G-A 9033129-G-A ***
7394141-G-T 7526100-G-T ***
9433093-G-A 9595484-G-A ***
9545252-C-A 9707643-C-A IR3_Prx ***
9677501-T-C 9839892-T-C IR3_Prx ***
9677502-G-A 9839893-G-A IR3_Prx ***
9784252-T-C 9946643-T-C ***
10001127-G-A 10163518-G-A ***
10018894-T-G 10181285-T-G ***
10029205-A-G 10191596-A-G ***
7394143-A-G 7526102-A-G ***
7394133-A-T 7526092-A-T ***
4878271-G-A 5010230-G-A ***
6266263-A-T 6398222-A-T IR3_Dst ***
4909497-G-A 5041456-G-A ***
5032662-A-G 5164621-A-G ***
5394525-T-A 5526484-T-A ***
5547205-C-T 5679164-C-T ***
5627165-T-A 5759124-T-A ***
5993596-G-A 6125555-G-A ***
6183085-G-A 6315044-G-A IR3_Dst ***
6266261-C-T 6398220-C-T IR3_Dst ***
6266264-G-T 6398223-G-T IR3_Dst ***
7288250-A-G 7420209-A-G ***
6266266-A-T 6398225-A-T IR3_Dst ***
6266290-C-T 6398249-C-T IR3_Dst ***
6448031-G-A 6579990-G-A ***
6601269-C-T 6733228-C-T ***
6772978-A-G 6904937-A-G ***
6954685-G-A 7086644-G-A ***
7024019-T-C 7155978-T-C ***
7035226-C-A 7167185-C-A ***
22273891-G-C 20112005-G-C DYZ19 ***
3157728-G-A 3289687-G-A ***
10061658-T-A 10224049-T-A ***
58848788-G-T 56742083-C-A ***
22360052-G-A 20198166-G-A DYZ19 ***
22297487-AGT-TGA 20135601-AGT-TGA DYZ19 ***
13483645-T-A 11327969-T-A ***
13842517-A-G 11721811-A-G ***
58838435-T-A 56752436-A-T ***
58909147-C-T 56681724-G-A ***
22361130-CA-GC 20199244-CA-GC DYZ19 ***
58848796-T-A 56742075-A-T ***
22360029-A-T 20198143-A-T DYZ19 ***
58848818-T-A 56742053-A-T ***
7016147-CA-C 7148106-CA-C 16×A***
8563745-C-CTT 8695704-C-CTT 21×T***
22360069-CT-AC 20198183-CT-AC DYZ19 ***
22234912-AC-TG 20073026-AC-TG DYZ19 ***
58848497-A-T 56742374-T-A ***
58824571-T-A 56766300-A-T ***
58824583-C-A 56766288-G-T ***
22360035-T-C 20198149-T-C DYZ19 ***
22297453-T-A 20135567-T-A DYZ19 ***
58824576-ATA-TTC 56766293-TAT-GAA ***
20522788-C-T 18360902-C-T P5_Dst ***
22297509-T-C 20135623-T-C DYZ19 ***
58844026-A-ATC 56746843-A-AAG ***
10059897-T-C 10222288-T-C ***
13515395-G-A 11359719-G-A ***
13716394-G-A 11560718-G-A ***
13716421-A-T 11560745-A-T ***
13716437-A-G 11560761-A-G ***
20522775-C-T 18360889-C-T P5_Dst ***
20522818-A-G 18360932-A-G P5_Dst ***
20531707-G-A 18369821-G-A P5_Dst ***
20522845-A-C 18360959-A-C P5_Dst ***
20531469-A-G 18369583-A-G P5_Dst ***
20531502-A-T 18369616-A-T P5_Dst ***
20531661-G-A 18369775-G-A P5_Dst ***
20531675-T-C 18369789-T-C P5_Dst ***
20531677-C-A 18369791-C-A P5_Dst ***
20531681-A-C 18369795-A-C P5_Dst ***
20531695-C-T 18369809-C-T P5_Dst ***
13470158-AGG-GCC 11314482-AGG-GCC ***
58824589-C-CT 56766278-C-CA ***
28556469-T-G 26410322-T-G ***
13473510-A-G 11317834-A-G ***
18454783-T-C 16342903-T-C P6_Dst ***
6617129-A-G 6749088-A-G ***
3440990-C-T 3572949-C-T ***
4819107-C-A 4951066-C-A ***
13307007-T-C 11151331-T-C ***
13480008-C-T 11324332-C-T ***
13473507-G-T 11317831-G-T ***
13479983-T-C 11324307-T-C ***
13479971-A-C 11324295-A-C ***
13479985-A-C 11324309-A-C ***
13515485-C-A 11359809-C-A ***
22273690-A-G 20111804-A-G DYZ19 ***
13531507-A-G 11375831-A-G F10891 ***
4887648-G-A 5019607-G-A ***
14610694-T-C 12498896-T-C ***
58917667-N-A 56673204-N-T ***
6120279-A-C 6252238-A-C ***
10049720-T-G 10212111-T-G ***
58917665-N-G 56673206-N-C ***
58824593-G-GATTC 56766277-G-GGAAT ***
22236553-ACTCTAGAC-TCACTGGAT 20074667-ACTCTAGAC-TCACTGGAT DYZ19 ***
58824597-TCCAT-GCCAG 56766270-ATGGA-CTGGC ***
58824606-ATC-TTG 56766263-GAT-CAA ***
58824613-CCATTCTAGT-GCATACTACA 56766249-ACTAGAATGG-TGTAGTATGC ***
6617387-C-A 6749346-C-A ***
3167207-C-A 3299166-C-A ***
13250569-T-G 11094893-T-G ***
58898168-C-T 56692703-G-A ***
58898184-C-T 56692687-G-A ***
22361092-AC-CA 20199206-AC-CA DYZ19 ***
22353496-A-G 20191610-A-G DYZ19 ***
58917661-NN-N ***
58917656-CNN-C ***
4682281-C-A 4814240-C-A YFS032809 ***
13716407-T-G 11560731-T-G ***
13725307-C-A 11569631-C-A ***
22341492-A-G 20179606-A-G DYZ19 ***
58844377-T-A 56746494-A-T ***
58844386-T-C 56746485-A-G ***
10061624-G-A 10224015-G-A ***
10061660-C-T 10224051-C-T ***
22292379-C-T 20130493-C-T DYZ19 ***
18462686-T-A 16350806-T-A P6_Dst ***
16158927-G-A 14047047-G-A P8_Dst ***
16158938-C-T 14047058-C-T P8_Dst ***
16186591-G-A 14074711-G-A ***
16785736-A-C 14673856-A-C ***
17023722-A-G 14911842-A-G ***
17186747-G-A 15074867-G-A ***
17971135-A-G 15859255-A-G ***
18702347-T-A 16590467-T-A ***
16158916-G-T 14047036-G-T P8_Dst ***
18984999-G-A 16873119-G-A ***
19632994-A-C 17521114-A-C P5_Prx ***
19632996-T-C 17521116-T-C P5_Prx ***
19633008-G-T 17521128-G-T P5_Prx ***
19841210-C-G 17729330-C-G P5_Prx ***
19841226-C-A 17729346-C-A P5_Prx ***
19843702-A-T 17731822-A-T P5_Prx ***
19843704-T-C 17731824-T-C P5_Prx ***
16158918-G-A 14047038-G-A P8_Dst ***
16158910-G-A 14047030-G-A P8_Dst ***
19843745-T-A 17731865-T-A P5_Prx ***
16026929-G-A 13915049-G-A ***
15442316-C-T 13330436-C-T ***
15522324-T-A 13410444-T-A ***
15572629-A-G 13460749-A-G ***
15675494-T-A 13563614-T-A ***
15856915-G-T 13745035-G-T ***
15924432-C-G 13812552-C-G ***
15924439-A-C 13812559-A-C ***
15924440-A-T 13812560-A-T ***
16066029-A-G 13954149-A-G ***
16158908-G-A 14047028-G-A P8_Dst ***
16080869-T-C 13968989-T-C ***
16080939-T-G 13969059-T-G ***
16158739-C-G 14046859-C-G P8_Dst ***
16158743-T-G 14046863-T-G P8_Dst ***
16158758-C-A 14046878-C-A P8_Dst ***
16158773-G-A 14046893-G-A P8_Dst ***
16158776-A-G 14046896-A-G P8_Dst ***
16158791-A-G 14046911-A-G P8_Dst ***
19843743-A-G 17731863-A-G P5_Prx ***
20081020-A-G 17969140-A-G P5_Dst ***
15213388-G-T 13101474-G-T ***
22234649-C-A 20072763-C-A DYZ19 ***
22153188-G-T 19991302-G-T ***
22153248-C-T 19991362-C-T ***
22200878-G-T 20038992-G-T ***
22222703-G-A 20060817-G-A DYZ19 ***
22234631-C-A 20072745-C-A DYZ19 ***
22234636-C-A 20072750-C-A DYZ19 ***
22234642-G-A 20072756-G-A DYZ19 ***
22234674-C-T 20072788-C-T DYZ19 ***
22118902-C-T 19957016-C-T ***
22234852-A-T 20072966-A-T DYZ19 ***
22234919-A-C 20073033-A-C DYZ19 ***
22250523-T-A 20088637-T-A DYZ19 ***
22273686-C-A 20111800-C-A DYZ19 ***
22273712-A-T 20111826-A-T DYZ19 ***
22292329-G-T 20130443-G-T DYZ19 ***
22292340-T-A 20130454-T-A DYZ19 ***
22292355-C-A 20130469-C-A DYZ19 ***
22153157-G-A 19991271-G-A ***
22085722-G-T 19923836-G-T ***
20081034-C-A 17969154-C-A P5_Dst ***
20308918-A-G 18147032-A-G P5_Dst ***
20081036-G-A 17969156-G-A P5_Dst ***
20081038-C-A 17969158-C-A P5_Dst ***
20081057-T-G 17969177-T-G P5_Dst ***
20308853-A-T 18146967-A-T P5_Dst ***
20308868-C-T 18146982-C-T P5_Dst ***
20308869-A-T 18146983-A-T P5_Dst ***
20308911-G-T 18147025-G-T P5_Dst ***
20308912-A-T 18147026-A-T P5_Dst ***
20323139-G-A 18161253-G-A P5_Dst ***
21787711-C-T 19625825-C-T ***
20531673-G-A 18369787-G-A P5_Dst ***
17281668-AATAG-A 15169788-AATAG-A 6×ATAG***
20921303-T-C 18759417-T-C P4_Dst ***
21061652-G-A 18899766-G-A ***
21214836-A-T 19052950-A-T ***
21407069-G-T 19245183-G-T ***
21476051-C-T 19314165-C-T ***
21698339-T-C 19536453-T-C ***
15394605-C-T 13282725-C-T ***
15002263-T-C 12890348-T-C ***
10061665-G-C 10224056-G-C ***
13470235-G-A 11314559-G-A ***
13461743-T-A 11306067-T-A ***
13463720-G-T 11308044-G-T ***
13467073-A-T 11311397-A-T ***
13467621-A-T 11311945-A-T ***
13467654-G-A 11311978-G-A ***
13470183-G-A 11314507-G-A ***
13470222-C-T 11314546-C-T ***
13470540-C-G 11314864-C-G ***
13393395-T-C 11237719-T-C ***
13473523-C-A 11317847-C-A ***
13475093-C-A 11319417-C-A ***
13475362-T-A 11319686-T-A ***
13475420-A-G 11319744-A-G ***
13476343-A-G 11320667-A-G ***
13477042-T-A 11321366-T-A ***
13478075-G-A 11322399-G-A ***
13479931-C-G 11324255-C-G ***
13461637-C-T 11305961-C-T ***
13389820-G-T 11234144-G-T ***
13479935-G-T 11324259-G-T ***
13130187-A-T 10619673-A-T ***
10061677-T-C 10224068-T-C ***
10066744-T-C 10229135-T-C ***
10084308-T-A 10246699-T-A ***
13130145-T-A 10619631-T-A ***
13130150-T-A 10619636-T-A ***
13130171-T-A 10619657-T-A ***
13130183-T-G 10619669-T-G ***
13130184-G-C 10619670-G-C ***
13216700-A-G 11061024-A-G ***
13379491-A-G 11223815-A-G ***
13246497-G-T 11090821-G-T ***
13254547-C-G 11098871-C-G ***
13256015-C-T 11100339-C-T ***
13256061-T-C 11100385-T-C ***
13256071-C-A 11100395-C-A ***
13333094-G-A 11177418-G-A ***
13345271-A-G 11189595-A-G ***
13379486-A-G 11223810-A-G ***
13479933-T-A 11324257-T-A ***
13479940-G-A 11324264-G-A ***
14522657-T-A 12410858-T-A ***
13726550-G-A 11570874-G-A ***
13721534-T-A 11565858-T-A ***
13721540-G-T 11565864-G-T ***
13721541-T-G 11565865-T-G ***
13721546-C-G 11565870-C-G ***
13721554-T-A 11565878-T-A ***
13724925-C-G 11569249-C-G ***
13724990-T-A 11569314-T-A ***
13725291-G-T 11569615-G-T ***
13728550-G-A 11572874-G-A ***
13716420-A-G 11560744-A-G ***
13728623-T-A 11572947-T-A ***
13728704-T-G 11573028-T-G ***
13748512-G-A 11592836-G-A ***
14181053-A-T 12060347-A-T ***
14303965-G-A 12183259-G-A ***
14392758-C-T 12272054-C-T Y91279 ***
14423259-A-G 12302534-A-G ***
14442595-G-T 12321868-G-T ***
13716422-C-G 11560746-C-G ***
13716377-A-G 11560701-A-G ***
13479951-T-C 11324275-T-C ***
13526375-T-G 11370699-T-G ***
13479952-A-C 11324276-A-C ***
13479974-G-T 11324298-G-T ***
13483812-C-T 11328136-C-T ***
13485178-C-T 11329502-C-T ***
13486287-A-G 11330611-A-G ***
13515516-T-C 11359840-T-C ***
13518328-C-T 11362652-C-T ***
13518333-T-A 11362657-T-A ***
13526417-G-T 11370741-G-T ***
13716366-A-G 11560690-A-G ***
13526424-C-T 11370748-C-T ***
13526600-A-G 11370924-A-G ***
13556376-G-C 11400700-G-C ***
13558114-T-A 11402438-T-A ***
13558604-A-G 11402928-A-G ***
13579528-T-C 11423852-T-C ***
13669656-A-G 11513980-A-G ***
13701962-A-T 11546286-A-T ***
58917654-TTC-T 56673214-NGA-N ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: EFNHB*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs169
Variant counts last updated 2018-07-08 21:00:04.

* BED data not available. Using default values.


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