Howard
BigY2: 457852MDKA Birth:
United StatesTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 457852 |
|---|---|---|---|---|---|---|---|
| hg19:Y:21590458-T-C hg38:Y:19428572-T-C | Y128360 | Y | Y | + | |||
| hg19:Y:22256077-G-T hg38:Y:20094191-G-T | BY214332 | DYZ19 | + | ||||
| hg19:Y:17994867-AAC-A hg38:Y:15882987-AAC-A | P7_Prx | ** | |||||
| hg19:Y:3436391-T-C hg38:Y:3568350-T-C | L344 | ** | |||||
| hg19:Y:18086115-G-T hg38:Y:15974235-G-T | FT253730 | ** | |||||
| hg19:Y:8153565-C-A hg38:Y:8285524-C-A | ** | ||||||
| hg19:Y:14760811-G-A hg38:Y:12648880-G-A | ** | ||||||
| hg19:Y:17467078-A-C hg38:Y:15355198-A-C | ** | ||||||
| hg38:Y:10959727-ATCCAC-A | ** | ||||||
| hg38:Y:56840827-C-A | ** | ||||||
| hg19:Y:13315562-C-A hg38:Y:11159886-C-A | ** | ||||||
| hg19:Y:21146309-C-A hg38:Y:18984423-C-A | ** | ||||||
| hg19:Y:14727350-A-T hg38:Y:12615418-A-T | ** | ||||||
| hg19:Y:18200980-C-A hg38:Y:16089100-C-A | ** | ||||||
| hg19:Y:2651976-C-A hg38:Y:2783935-C-A | ** | ||||||
| hg19:Y:2708570-C-A hg38:Y:2840529-C-A | ** | ||||||
| hg19:Y:2744721-C-A hg38:Y:2876680-C-A | ** | ||||||
| hg19:Y:2744742-C-A hg38:Y:2876701-C-A | ** | ||||||
| hg19:Y:2750856-G-T hg38:Y:2882815-G-T | ** | ||||||
| hg19:Y:2752507-C-A hg38:Y:2884466-C-A | ** | ||||||
| hg19:Y:2806240-C-A hg38:Y:2938199-C-A | ** | ||||||
| hg19:Y:2824485-C-A hg38:Y:2956444-C-A | ** | ||||||
| hg19:Y:2852821-C-A hg38:Y:2984780-C-A | ** | ||||||
| hg19:Y:2885743-C-A hg38:Y:3017702-C-A | ** | ||||||
| hg19:Y:2901482-A-T hg38:Y:3033441-A-T | ** | ||||||
| hg19:Y:3178930-C-A hg38:Y:3310889-C-A | ** | ||||||
| hg19:Y:3467584-G-C hg38:Y:3599543-G-C | ** | ||||||
| hg19:Y:3626587-G-T hg38:Y:3758546-G-T | ** | ||||||
| hg19:Y:3784615-C-A hg38:Y:3916574-C-A | ** | ||||||
| hg19:Y:3821592-G-T hg38:Y:3953551-G-T | ** | ||||||
| hg19:Y:3821593-T-A hg38:Y:3953552-T-A | ** | ||||||
| hg19:Y:4134085-C-A hg38:Y:4266044-C-A | ** | ||||||
| hg19:Y:4165677-C-A hg38:Y:4297636-C-A | ** | ||||||
| hg19:Y:4172201-C-A hg38:Y:4304160-C-A | ** | ||||||
| hg19:Y:4604311-C-A hg38:Y:4736270-C-A | ** | ||||||
| hg19:Y:4840095-C-A hg38:Y:4972054-C-A | ** | ||||||
| hg19:Y:4840700-C-A hg38:Y:4972659-C-A | ** | ||||||
| hg19:Y:4959584-C-A hg38:Y:5091543-C-A | ** | ||||||
| hg19:Y:5170255-G-C hg38:Y:5302214-G-C | ** | ||||||
| hg19:Y:5349457-C-A hg38:Y:5481416-C-A | ** | ||||||
| hg19:Y:5446493-C-A hg38:Y:5578452-C-A | ** | ||||||
| hg19:Y:5449535-G-T hg38:Y:5581494-G-T | FT308340 | ** | |||||
| hg19:Y:5711653-G-T hg38:Y:5843612-G-T | ** | ||||||
| hg19:Y:6039736-C-A hg38:Y:6171695-C-A | ** | ||||||
| hg19:Y:6177530-TTG-T hg38:Y:6309489-TTG-T | IR3_Dst | ** | |||||
| hg19:Y:6293359-TTTTG-T hg38:Y:6425318-TTTTG-T | IR3_Dst | ** | |||||
| hg19:Y:6427675-C-A hg38:Y:6559634-C-A | ** | ||||||
| hg19:Y:6520072-A-T hg38:Y:6652031-A-T | ** | ||||||
| hg19:Y:6769780-C-G hg38:Y:6901739-C-G | ** | ||||||
| hg19:Y:6770914-G-A hg38:Y:6902873-G-A | ** | ||||||
| hg19:Y:6826598-T-A hg38:Y:6958557-T-A | ** | ||||||
| hg19:Y:7038579-C-A hg38:Y:7170538-C-A | ** | ||||||
| hg19:Y:7156725-C-A hg38:Y:7288684-C-A | ** | ||||||
| hg19:Y:7209490-T-A hg38:Y:7341449-T-A | ** | ||||||
| hg19:Y:7256346-A-T hg38:Y:7388305-A-T | ** | ||||||
| hg19:Y:7339748-C-A hg38:Y:7471707-C-A | ** | ||||||
| hg19:Y:7348709-C-A hg38:Y:7480668-C-A | ** | ||||||
| hg19:Y:7359833-A-T hg38:Y:7491792-A-T | ** | ||||||
| hg19:Y:7363813-C-A hg38:Y:7495772-C-A | ** | ||||||
| hg19:Y:7414016-C-A hg38:Y:7545975-C-A | ** | ||||||
| hg19:Y:7470726-G-A hg38:Y:7602685-G-A | IR1_L | ** | |||||
| hg19:Y:7499971-G-A hg38:Y:7631930-G-A | IR1_L | ** | |||||
| hg19:Y:7664302-A-G hg38:Y:7796261-A-G | ** | ||||||
| hg19:Y:7755419-C-A hg38:Y:7887378-C-A | ** | ||||||
| hg19:Y:7925337-T-G hg38:Y:8057296-T-G | ** | ||||||
| hg19:Y:8036072-C-A hg38:Y:8168031-C-A | ** | ||||||
| hg19:Y:8112516-A-C hg38:Y:8244475-A-C | ** | ||||||
| hg19:Y:8169171-C-A hg38:Y:8301130-C-A | ** | ||||||
| hg19:Y:8173716-G-T hg38:Y:8305675-G-T | ** | ||||||
| hg19:Y:8649873-C-A hg38:Y:8781832-C-A | ** | ||||||
| hg19:Y:8698980-G-T hg38:Y:8830939-G-T | ** | ||||||
| hg19:Y:8713755-C-A hg38:Y:8845714-C-A | ** | ||||||
| hg19:Y:8720131-C-A hg38:Y:8852090-C-A | ** | ||||||
| hg19:Y:8720605-A-C hg38:Y:8852564-A-C | ** | ||||||
| hg19:Y:8799722-C-A hg38:Y:8931681-C-A | ** | ||||||
| hg19:Y:8832135-C-A hg38:Y:8964094-C-A | ** | ||||||
| hg19:Y:8835206-C-A hg38:Y:8967165-C-A | ** | ||||||
| hg19:Y:8913044-C-A hg38:Y:9045003-C-A | ** | ||||||
| hg38:Y:9110902-G-T | ** | ||||||
| hg19:Y:8981429-A-T hg38:Y:9143820-A-T | ** | ||||||
| hg19:Y:9088933-A-T hg38:Y:9251324-A-T | ** | ||||||
| hg19:Y:9088937-A-T hg38:Y:9251328-A-T | ** | ||||||
| hg19:Y:9131177-C-A hg38:Y:9293568-C-A | ** | ||||||
| hg19:Y:9507963-T-C hg38:Y:9670354-T-C | ** | ||||||
| hg19:Y:9713462-G-T hg38:Y:9875853-G-T | IR3_Prx | ** | |||||
| hg19:Y:9732659-G-T hg38:Y:9895050-G-T | IR3_Prx | ** | |||||
| hg19:Y:9940181-C-A hg38:Y:10102572-C-A | ** | ||||||
| hg19:Y:9965334-C-A hg38:Y:10127725-C-A | ** | ||||||
| hg19:Y:10040612-C-A hg38:Y:10203003-C-A | ** | ||||||
| hg38:Y:10631264-C-T | ** | ||||||
| hg38:Y:10631265-C-G | ** | ||||||
| hg38:Y:10631280-C-A | ** | ||||||
| hg38:Y:10631282-T-A | ** | ||||||
| hg38:Y:10631289-C-G | ** | ||||||
| hg38:Y:10631300-C-G | ** | ||||||
| hg38:Y:10632615-C-A | ** | ||||||
| hg38:Y:10662405-C-T | ** | ||||||
| hg38:Y:10664411-T-C | ** | ||||||
| hg38:Y:10665847-A-T | ** | ||||||
| hg38:Y:10668330-T-TAATCCACCCA | ** | ||||||
| hg38:Y:10671330-C-A | ** | ||||||
| hg38:Y:10678436-C-A | ** | ||||||
| hg38:Y:10679159-C-A | ** | ||||||
| hg38:Y:10685637-A-T | ** | ||||||
| hg38:Y:10687044-A-T | ** | ||||||
| hg38:Y:10687049-G-T | ** | ||||||
| hg38:Y:10747043-C-A | ** | ||||||
| hg38:Y:10755301-GCACTC-G | ** | ||||||
| hg38:Y:10756044-C-T | ** | ||||||
| hg38:Y:10756107-A-G | ** | ||||||
| hg38:Y:10756109-C-T | ** | ||||||
| hg38:Y:10756129-C-T | ** | ||||||
| hg38:Y:10756136-C-T | ** | ||||||
| hg38:Y:10756611-T-G | ** | ||||||
| hg38:Y:10756615-A-T | ** | ||||||
| hg38:Y:10759897-T-A | ** | ||||||
| hg38:Y:10759899-C-A | ** | ||||||
| hg38:Y:10760838-C-A | ** | ||||||
| hg38:Y:10786610-G-T | ** | ||||||
| hg38:Y:10789539-G-C | ** | ||||||
| hg38:Y:10789541-T-C | ** | ||||||
| hg38:Y:10800785-C-A | ** | ||||||
| hg38:Y:10801659-T-TTGCAC | ** | ||||||
| hg38:Y:10801662-C-CGGTTG | ** | ||||||
| hg38:Y:10814515-T-A | ** | ||||||
| hg38:Y:10823278-G-T | ** | ||||||
| hg38:Y:10828695-C-CCGTTG | ** | ||||||
| hg38:Y:10841009-CTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAT-C | ** | ||||||
| hg38:Y:10841940-A-T | ** | ||||||
| hg38:Y:10844224-A-G | ** | ||||||
| hg38:Y:10844254-A-C | ** | ||||||
| hg38:Y:10844262-C-G | ** | ||||||
| hg38:Y:10847709-T-G | ** | ||||||
| hg38:Y:10852709-C-G | ** | ||||||
| hg38:Y:10869607-C-A | ** | ||||||
| hg38:Y:10878180-C-A | ** | ||||||
| hg38:Y:10881949-C-A | ** | ||||||
| hg38:Y:10893379-T-A | ** | ||||||
| hg38:Y:10893750-C-A | ** | ||||||
| hg38:Y:10893853-T-C | ** | ||||||
| hg38:Y:10912201-C-G | ** | ||||||
| hg38:Y:10922172-C-G | ** | ||||||
| hg38:Y:10925366-T-C | ** | ||||||
| hg38:Y:10925389-C-T | ** | ||||||
| hg38:Y:10925411-C-T | ** | ||||||
| hg38:Y:10939947-C-A | ** | ||||||
| hg38:Y:10952512-C-A | ** | ||||||
| hg38:Y:10961533-A-G | ** | ||||||
| hg38:Y:10974947-C-A | ** | ||||||
| hg38:Y:10976301-C-A | ** | ||||||
| hg38:Y:10980015-C-A | ** | ||||||
| hg38:Y:10980104-C-A | ** | ||||||
| hg38:Y:10980130-C-A | ** | ||||||
| hg38:Y:10981213-C-A | ** | ||||||
| hg38:Y:10986788-A-T | ** | ||||||
| hg38:Y:10987702-T-A | ** | ||||||
| hg38:Y:10988694-C-A | ** | ||||||
| hg38:Y:10989167-C-T | ** | ||||||
| hg38:Y:10989189-C-A | ** | ||||||
| hg38:Y:10997073-C-A | ** | ||||||
| hg38:Y:10999066-C-A | ** | ||||||
| hg38:Y:11003748-C-CAGTTCTTTCT | ** | ||||||
| hg38:Y:11003752-C-G | ** | ||||||
| hg38:Y:11011052-G-A | ** | ||||||
| hg38:Y:11011053-C-A | ** | ||||||
| hg38:Y:11011063-C-A | ** | ||||||
| hg38:Y:11011066-C-A | ** | ||||||
| hg38:Y:11011080-G-T | ** | ||||||
| hg38:Y:11012287-C-CCATTA | ** | ||||||
| hg38:Y:11012300-T-G | ** | ||||||
| hg38:Y:11012303-C-CGGTTG | ** | ||||||
| hg38:Y:11012311-T-G | ** | ||||||
| hg38:Y:11012312-C-A | ** | ||||||
| hg38:Y:11012355-C-A | ** | ||||||
| hg38:Y:11012365-C-T | ** | ||||||
| hg38:Y:11025520-A-C | ** | ||||||
| hg38:Y:11027608-T-G | ** | ||||||
| hg38:Y:11030228-T-G | ** | ||||||
| hg38:Y:11037815-C-A | ** | ||||||
| hg19:Y:13218958-C-A hg38:Y:11063282-C-A | ** | ||||||
| hg19:Y:13228093-C-A hg38:Y:11072417-C-A | ** | ||||||
| hg19:Y:13229886-C-A hg38:Y:11074210-C-A | ** | ||||||
| hg19:Y:13235418-A-T hg38:Y:11079742-A-T | ** | ||||||
| hg19:Y:13237499-C-A hg38:Y:11081823-C-A | ** | ||||||
| hg19:Y:13262806-A-G hg38:Y:11107130-A-G | ** | ||||||
| hg19:Y:13468441-C-A hg38:Y:11312765-C-A | ** | ||||||
| hg19:Y:13484658-T-A hg38:Y:11328982-T-A | ** | ||||||
| hg19:Y:13510168-C-A hg38:Y:11354492-C-A | ** | ||||||
| hg19:Y:13617543-C-A hg38:Y:11461867-C-A | ** | ||||||
| hg19:Y:13705044-C-A hg38:Y:11549368-C-A | DYZ17 | ** | |||||
| hg19:Y:13705049-A-C hg38:Y:11549373-A-C | DYZ17 | ** | |||||
| hg19:Y:13705051-G-T hg38:Y:11549375-G-T | DYZ17 | ** | |||||
| hg19:Y:13705056-A-G hg38:Y:11549380-A-G | DYZ17 | ** | |||||
| hg19:Y:13705079-A-T hg38:Y:11549403-A-T | DYZ17 | ** | |||||
| hg19:Y:13707363-G-T hg38:Y:11551687-G-T | DYZ17 | ** | |||||
| hg19:Y:13712226-T-A hg38:Y:11556550-T-A | DYZ17 | ** | |||||
| hg19:Y:13712258-C-T hg38:Y:11556582-C-T | DYZ17 | ** | |||||
| hg19:Y:13726104-C-A hg38:Y:11570428-C-A | DYZ17 | ** | |||||
| hg38:Y:11649583-C-G | DYZ17 | ** | |||||
| hg38:Y:11652361-C-A | DYZ17 | ** | |||||
| hg38:Y:11658895-C-A | DYZ17 | ** | |||||
| hg19:Y:13804046-G-T hg38:Y:11683340-G-T | DYZ17 | ** | |||||
| hg19:Y:13817382-C-A hg38:Y:11696676-C-A | DYZ17 | ** | |||||
| hg19:Y:13884908-C-A hg38:Y:11764202-C-A | ** | ||||||
| hg19:Y:13885979-T-G hg38:Y:11765273-T-G | ** | ||||||
| hg19:Y:13902274-G-A hg38:Y:11781568-G-A | ** | ||||||
| hg19:Y:13921662-A-C hg38:Y:11800956-A-C | ** | ||||||
| hg19:Y:13941649-A-G hg38:Y:11820943-A-G | ** | ||||||
| hg19:Y:13962159-C-A hg38:Y:11841453-C-A | ** | ||||||
| hg19:Y:14050110-C-A hg38:Y:11929404-C-A | ** | ||||||
| hg19:Y:14061939-C-A hg38:Y:11941233-C-A | ** | ||||||
| hg19:Y:14175118-A-C hg38:Y:12054412-A-C | ** | ||||||
| hg19:Y:14224355-C-A hg38:Y:12103649-C-A | ** | ||||||
| hg19:Y:14324613-C-G hg38:Y:12203907-C-G | ** | ||||||
| hg19:Y:14356327-C-T hg38:Y:12235622-C-T | FT391977 | ** | |||||
| hg19:Y:14379889-C-A hg38:Y:12259185-C-A | ** | ||||||
| hg19:Y:14421774-C-A hg38:Y:12301049-C-A | ** | ||||||
| hg19:Y:14458013-C-A hg38:Y:12337286-C-A | ** | ||||||
| hg19:Y:14462483-C-A hg38:Y:12341756-C-A | ** | ||||||
| hg19:Y:14531279-C-A hg38:Y:12419480-C-A | ** | ||||||
| hg19:Y:14551627-G-C hg38:Y:12439828-G-C | ** | ||||||
| hg19:Y:14639720-A-G hg38:Y:12527789-A-G | ** | ||||||
| hg19:Y:14694788-C-A hg38:Y:12582854-C-A | ** | ||||||
| hg19:Y:14697081-C-A hg38:Y:12585147-C-A | ** | ||||||
| hg19:Y:14768488-G-T hg38:Y:12656557-G-T | ** | ||||||
| hg19:Y:14908415-A-C hg38:Y:12796482-A-C | ** | ||||||
| hg19:Y:15114661-C-A hg38:Y:13002748-C-A | ** | ||||||
| hg19:Y:15127162-C-A hg38:Y:13015249-C-A | ** | ||||||
| hg19:Y:15140755-C-A hg38:Y:13028842-C-A | ** | ||||||
| hg19:Y:15365283-C-A hg38:Y:13253403-C-A | ** | ||||||
| hg19:Y:15397147-G-T hg38:Y:13285267-G-T | ** | ||||||
| hg19:Y:15435215-G-T hg38:Y:13323335-G-T | ** | ||||||
| hg19:Y:15490524-A-G hg38:Y:13378644-A-G | ** | ||||||
| hg19:Y:15490603-C-A hg38:Y:13378723-C-A | ** | ||||||
| hg19:Y:15495093-C-A hg38:Y:13383213-C-A | ** | ||||||
| hg19:Y:15503459-C-A hg38:Y:13391579-C-A | ** | ||||||
| hg19:Y:15650495-T-G hg38:Y:13538615-T-G | ** | ||||||
| hg19:Y:15788071-C-G hg38:Y:13676191-C-G | ** | ||||||
| hg19:Y:15792765-T-A hg38:Y:13680885-T-A | ** | ||||||
| hg19:Y:15815397-C-A hg38:Y:13703517-C-A | ** | ||||||
| hg19:Y:15865867-T-C hg38:Y:13753987-T-C | ** | ||||||
| hg19:Y:15932254-C-A hg38:Y:13820374-C-A | FT370815 | ** | |||||
| hg19:Y:16016403-C-A hg38:Y:13904523-C-A | ** | ||||||
| hg19:Y:16042776-C-A hg38:Y:13930896-C-A | ** | ||||||
| hg19:Y:16048120-C-A hg38:Y:13936240-C-A | ** | ||||||
| hg19:Y:16051013-T-A hg38:Y:13939133-T-A | ** | ||||||
| hg19:Y:16055879-G-T hg38:Y:13943999-G-T | ** | ||||||
| hg19:Y:16075903-C-A hg38:Y:13964023-C-A | ** | ||||||
| hg19:Y:16179783-C-A hg38:Y:14067903-C-A | ** | ||||||
| hg19:Y:16271207-C-A hg38:Y:14159327-C-A | ** | ||||||
| hg19:Y:16293103-T-A hg38:Y:14181223-T-A | ** | ||||||
| hg19:Y:16302604-T-A hg38:Y:14190724-T-A | ** | ||||||
| hg19:Y:16405607-C-A hg38:Y:14293727-C-A | ** | ||||||
| hg19:Y:16421175-G-T hg38:Y:14309295-G-T | ** | ||||||
| hg19:Y:16421252-G-T hg38:Y:14309372-G-T | ** | ||||||
| hg19:Y:16430174-C-A hg38:Y:14318294-C-A | ** | ||||||
| hg19:Y:16588296-A-C hg38:Y:14476416-A-C | ** | ||||||
| hg19:Y:16666176-C-A hg38:Y:14554296-C-A | ** | ||||||
| hg19:Y:16713058-T-C hg38:Y:14601178-T-C | ** | ||||||
| hg19:Y:17020582-A-C hg38:Y:14908702-A-C | ** | ||||||
| hg19:Y:17128069-A-G hg38:Y:15016189-A-G | ** | ||||||
| hg19:Y:17158528-C-A hg38:Y:15046648-C-A | ** | ||||||
| hg19:Y:17159489-C-A hg38:Y:15047609-C-A | ** | ||||||
| hg19:Y:17183504-C-A hg38:Y:15071624-C-A | ** | ||||||
| hg19:Y:17211333-A-T hg38:Y:15099453-A-T | ** | ||||||
| hg19:Y:17244290-G-T hg38:Y:15132410-G-T | ** | ||||||
| hg19:Y:17254716-C-A hg38:Y:15142836-C-A | ** | ||||||
| hg19:Y:17265022-T-G hg38:Y:15153142-T-G | ** | ||||||
| hg19:Y:17297120-T-G hg38:Y:15185240-T-G | ** | ||||||
| hg19:Y:17302146-C-A hg38:Y:15190266-C-A | ** | ||||||
| hg19:Y:17402562-C-A hg38:Y:15290682-C-A | ** | ||||||
| hg19:Y:17440385-C-A hg38:Y:15328505-C-A | ** | ||||||
| hg19:Y:17567874-G-T hg38:Y:15455994-G-T | ** | ||||||
| hg19:Y:17569147-C-A hg38:Y:15457267-C-A | ** | ||||||
| hg19:Y:17657418-C-A hg38:Y:15545538-C-A | ** | ||||||
| hg19:Y:17778776-G-T hg38:Y:15666896-G-T | ** | ||||||
| hg19:Y:17778890-G-T hg38:Y:15667010-G-T | ** | ||||||
| hg19:Y:17842388-T-A hg38:Y:15730508-T-A | ** | ||||||
| hg19:Y:17871922-A-T hg38:Y:15760042-A-T | ** | ||||||
| hg19:Y:17915907-C-A hg38:Y:15804027-C-A | ** | ||||||
| hg19:Y:17929191-T-A hg38:Y:15817311-T-A | ** | ||||||
| hg19:Y:18098855-C-A hg38:Y:15986975-C-A | ** | ||||||
| hg19:Y:18165539-A-C hg38:Y:16053659-A-C | ** | ||||||
| hg19:Y:18271076-G-T hg38:Y:16159196-G-T | ** | ||||||
| hg19:Y:18271107-C-A hg38:Y:16159227-C-A | ** | ||||||
| hg19:Y:18355287-T-G hg38:Y:16243407-T-G | P6_Prx | ** | |||||
| hg19:Y:18539201-T-A hg38:Y:16427321-T-A | ** | ||||||
| hg19:Y:18573415-C-A hg38:Y:16461535-C-A | ** | ||||||
| hg19:Y:18589811-C-A hg38:Y:16477931-C-A | ** | ||||||
| hg19:Y:18624405-T-C hg38:Y:16512525-T-C | ** | ||||||
| hg19:Y:18631026-A-T hg38:Y:16519146-A-T | ** | ||||||
| hg19:Y:18648725-C-A hg38:Y:16536845-C-A | ** | ||||||
| hg19:Y:18730273-A-T hg38:Y:16618393-A-T | ** | ||||||
| hg19:Y:18756076-A-T hg38:Y:16644196-A-T | ** | ||||||
| hg19:Y:18873458-A-T hg38:Y:16761578-A-T | ** | ||||||
| hg19:Y:18923910-G-T hg38:Y:16812030-G-T | ** | ||||||
| hg19:Y:18948196-C-A hg38:Y:16836316-C-A | ** | ||||||
| hg19:Y:18965934-C-A hg38:Y:16854054-C-A | ** | ||||||
| hg19:Y:18986489-C-A hg38:Y:16874609-C-A | ** | ||||||
| hg19:Y:19111397-A-C hg38:Y:16999517-A-C | ** | ||||||
| hg19:Y:19202753-T-A hg38:Y:17090873-T-A | ** | ||||||
| hg19:Y:19314681-C-A hg38:Y:17202801-C-A | ** | ||||||
| hg19:Y:19415148-C-A hg38:Y:17303268-C-A | ** | ||||||
| hg19:Y:19416518-C-A hg38:Y:17304638-C-A | ** | ||||||
| hg19:Y:19444230-C-A hg38:Y:17332350-C-A | ** | ||||||
| hg19:Y:19477456-G-T hg38:Y:17365576-G-T | ** | ||||||
| hg19:Y:19482208-A-T hg38:Y:17370328-A-T | ** | ||||||
| hg19:Y:19505378-A-C hg38:Y:17393498-A-C | ** | ||||||
| hg19:Y:19551740-A-C hg38:Y:17439860-A-C | ** | ||||||
| hg19:Y:19600539-G-A hg38:Y:17488659-G-A | P5_Prx | ** | |||||
| hg19:Y:19673901-C-A hg38:Y:17562021-C-A | P5_Prx | ** | |||||
| hg19:Y:19746855-A-T hg38:Y:17634975-A-T | P5_Prx | ** | |||||
| hg19:Y:19746869-A-T hg38:Y:17634989-A-T | P5_Prx | ** | |||||
| hg19:Y:19794114-C-A hg38:Y:17682234-C-A | P5_Prx | ** | |||||
| hg19:Y:19919736-T-A hg38:Y:17807856-T-A | P5_Prx | ** | |||||
| hg19:Y:19919753-C-A hg38:Y:17807873-C-A | P5_Prx | ** | |||||
| hg19:Y:19919754-T-A hg38:Y:17807874-T-A | P5_Prx | ** | |||||
| hg19:Y:19919755-T-A hg38:Y:17807875-T-A | P5_Prx | ** | |||||
| hg19:Y:19919770-T-A hg38:Y:17807890-T-A | P5_Prx | ** | |||||
| hg19:Y:19919777-T-A hg38:Y:17807897-T-A | P5_Prx | ** | |||||
| hg19:Y:20128546-G-T hg38:Y:18016666-G-T | P5_Dst | ** | |||||
| hg19:Y:20330319-G-T hg38:Y:18168433-G-T | P5_Dst | ** | |||||
| hg19:Y:21125673-A-C hg38:Y:18963787-A-C | ** | ||||||
| hg19:Y:21170354-C-A hg38:Y:19008468-C-A | ** | ||||||
| hg19:Y:21207714-C-A hg38:Y:19045828-C-A | ** | ||||||
| hg19:Y:21208902-C-A hg38:Y:19047016-C-A | ** | ||||||
| hg19:Y:21218826-C-A hg38:Y:19056940-C-A | ** | ||||||
| hg19:Y:21262718-C-A hg38:Y:19100832-C-A | ** | ||||||
| hg19:Y:21281651-C-A hg38:Y:19119765-C-A | ** | ||||||
| hg19:Y:21382102-C-A hg38:Y:19220216-C-A | ** | ||||||
| hg19:Y:21450575-C-A hg38:Y:19288689-C-A | ** | ||||||
| hg19:Y:21499069-G-T hg38:Y:19337183-G-T | ** | ||||||
| hg19:Y:21522123-T-G hg38:Y:19360237-T-G | ** | ||||||
| hg19:Y:21604243-T-A hg38:Y:19442357-T-A | ** | ||||||
| hg19:Y:21604244-G-T hg38:Y:19442358-G-T | ** | ||||||
| hg19:Y:21912003-G-C hg38:Y:19750117-G-C | ** | ||||||
| hg19:Y:21986465-C-A hg38:Y:19824579-C-A | ** | ||||||
| hg19:Y:22068495-C-A hg38:Y:19906609-C-A | ** | ||||||
| hg19:Y:22134101-A-C hg38:Y:19972215-A-C | ** | ||||||
| hg19:Y:22147695-C-A hg38:Y:19985809-C-A | ** | ||||||
| hg19:Y:22207552-A-C hg38:Y:20045666-A-C | ** | ||||||
| hg19:Y:22264335-G-T hg38:Y:20102449-G-T | DYZ19 | ** | |||||
| hg19:Y:22310566-A-C hg38:Y:20148680-A-C | DYZ19 | ** | |||||
| hg19:Y:22579491-T-G hg38:Y:20417605-T-G | ** | ||||||
| hg19:Y:22660702-C-A hg38:Y:20498816-C-A | ** | ||||||
| hg19:Y:22867191-C-A hg38:Y:20705305-C-A | ** | ||||||
| hg19:Y:22979767-G-T hg38:Y:20817881-G-T | ** | ||||||
| hg19:Y:23026303-C-A hg38:Y:20864417-C-A | ** | ||||||
| hg19:Y:23065517-C-A hg38:Y:20903631-C-A | ** | ||||||
| hg19:Y:23127004-C-A hg38:Y:20965118-C-A | ** | ||||||
| hg19:Y:23249431-G-T hg38:Y:21087545-G-T | ** | ||||||
| hg19:Y:23264302-C-A hg38:Y:21102416-C-A | ** | ||||||
| hg19:Y:23415336-A-T hg38:Y:21253450-A-T | ** | ||||||
| hg19:Y:23432760-A-T hg38:Y:21270874-A-T | ** | ||||||
| hg19:Y:23475524-C-A hg38:Y:21313638-C-A | ** | ||||||
| hg19:Y:23475742-A-T hg38:Y:21313856-A-T | ** | ||||||
| hg19:Y:23570199-C-A hg38:Y:21408313-C-A | ** | ||||||
| hg19:Y:23848707-C-A hg38:Y:21686821-C-A | ** | ||||||
| hg19:Y:23954205-C-A hg38:Y:21808058-C-A | ** | ||||||
| hg19:Y:24244636-C-A hg38:Y:22098489-C-A | P3_b1 | ** | |||||
| hg19:Y:24244637-T-G hg38:Y:22098490-T-G | P3_b1 | ** | |||||
| hg19:Y:24247415-AC-A hg38:Y:22101268-AC-A | P3_b1 | ** | |||||
| hg19:Y:24302763-A-AGAT hg38:Y:22156616-A-AGAT | P3_t1 | ** | |||||
| hg19:Y:24310310-T-TAC hg38:Y:22164163-T-TAC | P3_t1 | ** | |||||
| hg19:Y:24409309-G-T hg38:Y:22263162-G-T | ** | ||||||
| hg19:Y:25246347-T-G hg38:Y:23100200-T-G | P2_r1 | ** | |||||
| hg19:Y:26078746-G-T hg38:Y:23932599-G-T | P1_Y1 | ** | |||||
| hg19:Y:26415593-G-T hg38:Y:24269446-G-T | P1_Y1 | ** | |||||
| hg19:Y:27424035-C-A hg38:Y:25277888-C-A | P1_g3 | ** | |||||
| hg19:Y:27810344-G-T hg38:Y:25664197-G-T | P1_Y2 | ** | |||||
| hg19:Y:27966857-G-T hg38:Y:25820710-G-T | P1_Y2 | 21×TA | ** | ||||
| hg19:Y:27967336-G-T hg38:Y:25821189-G-T | P1_Y2 | 10×TA | ** | ||||
| hg19:Y:28492050-A-T hg38:Y:26345903-A-T | ** | ||||||
| hg19:Y:28492065-G-T hg38:Y:26345918-G-T | ** | ||||||
| hg19:Y:28772847-C-A hg38:Y:26626700-C-A | ** | ||||||
| hg19:Y:28774448-A-T hg38:Y:26628301-A-T | ** | ||||||
| hg38:Y:56837942-G-T | ** | ||||||
| hg38:Y:56839969-A-G | ** | ||||||
| hg38:Y:56843801-A-G | ** | ||||||
| hg38:Y:56848834-G-T | ** | ||||||
| hg19:Y:16818669-T-TA hg38:Y:14706789-T-TA | 9×A | *** | |||||
| hg19:Y:13865779-C-A hg38:Y:11745073-C-A | DYZ17 | 10×GAATG | *** | ||||
| hg19:Y:18709666-C-A hg38:Y:16597786-C-A | *** | ||||||
| hg19:Y:15422098-CAAAA-C,CAAA hg38:Y:13310218-CAAAA-C,CAAA | 20×A | *** | |||||
| hg19:Y:2750754-A-G hg38:Y:2882713-A-G | *** | ||||||
| hg19:Y:2810525-C-A hg38:Y:2942484-C-A | *** | ||||||
| hg19:Y:2828804-C-A hg38:Y:2960763-C-A | *** | ||||||
| hg19:Y:4425610-A-T hg38:Y:4557569-A-T | *** | ||||||
| hg19:Y:6000851-G-T hg38:Y:6132810-G-T | *** | ||||||
| hg19:Y:6121055-A-G hg38:Y:6253014-A-G | *** | ||||||
| hg19:Y:6491135-C-A hg38:Y:6623094-C-A | A17066 | *** | |||||
| hg19:Y:7228113-C-A hg38:Y:7360072-C-A | *** | ||||||
| hg19:Y:7522849-A-G hg38:Y:7654808-A-G | *** | ||||||
| hg19:Y:7670632-C-A hg38:Y:7802591-C-A | *** | ||||||
| hg19:Y:8386195-C-A hg38:Y:8518154-C-A | *** | ||||||
| hg19:Y:8702888-GTAAA-G hg38:Y:8834847-GTAAA-G | *** | ||||||
| hg19:Y:9843184-CAA-C,CAAA hg38:Y:10005575-CAA-C,CAAA | 15×A | *** | |||||
| hg38:Y:10657411-A-G | *** | ||||||
| hg38:Y:10673914-A-ATGT | *** | ||||||
| hg38:Y:10926707-C-A | *** | ||||||
| hg38:Y:10937439-C-A | *** | ||||||
| hg38:Y:10962917-C-A | *** | ||||||
| hg19:Y:13653954-T-C hg38:Y:11498278-T-C | DYZ17 | *** | |||||
| hg19:Y:13865793-T-C hg38:Y:11745087-T-C | DYZ17 | *** | |||||
| hg19:Y:13865800-G-GATACA hg38:Y:11745094-G-GATACA | DYZ17 | *** | |||||
| hg19:Y:13865805-G-A hg38:Y:11745099-G-A | DYZ17 | *** | |||||
| hg19:Y:14252551-C-A hg38:Y:12131845-C-A | *** | ||||||
| hg19:Y:14294481-C-A hg38:Y:12173775-C-A | FT195941 | *** | |||||
| hg19:Y:14590707-C-A hg38:Y:12478907-C-A | *** | ||||||
| hg19:Y:14626285-C-A hg38:Y:12514353-C-A | *** | ||||||
| hg19:Y:15041709-C-A hg38:Y:12929799-C-A | *** | ||||||
| hg19:Y:15076197-G-A hg38:Y:12964287-G-A | *** | ||||||
| hg19:Y:15281048-C-A hg38:Y:13169147-C-A | *** | ||||||
| hg19:Y:15434037-T-C hg38:Y:13322157-T-C | *** | ||||||
| hg19:Y:15592992-A-C hg38:Y:13481112-A-C | *** | ||||||
| hg19:Y:15663086-C-A hg38:Y:13551206-C-A | *** | ||||||
| hg19:Y:16422305-C-A hg38:Y:14310425-C-A | *** | ||||||
| hg19:Y:16757043-ATTTTT-A hg38:Y:14645163-ATTTTT-A | 27×T | *** | |||||
| hg19:Y:16863543-AT-A,ATT hg38:Y:14751663-AT-A,ATT | 14×T | *** | |||||
| hg19:Y:17237284-A-C hg38:Y:15125404-A-C | *** | ||||||
| hg19:Y:17277413-A-T hg38:Y:15165533-A-T | *** | ||||||
| hg19:Y:17475337-C-A hg38:Y:15363457-C-A | *** | ||||||
| hg19:Y:17890546-G-T hg38:Y:15778666-G-T | *** | ||||||
| hg19:Y:18256351-T-A hg38:Y:16144471-T-A | *** | ||||||
| hg19:Y:18765807-C-A hg38:Y:16653927-C-A | *** | ||||||
| hg19:Y:19129053-CTTT-C,CTTTT hg38:Y:17017173-CTTT-C,CTTTT | 16×T | *** | |||||
| hg19:Y:19162186-ACATTT-A hg38:Y:17050306-ACATTT-A | *** | ||||||
| hg19:Y:19205827-G-A hg38:Y:17093947-G-A | *** | ||||||
| hg19:Y:19531181-G-A hg38:Y:17419301-G-A | *** | ||||||
| hg19:Y:21082231-C-A hg38:Y:18920345-C-A | *** | ||||||
| hg19:Y:21133217-A-G hg38:Y:18971331-A-G | *** | ||||||
| hg19:Y:21250597-C-A hg38:Y:19088711-C-A | *** | ||||||
| hg19:Y:21511046-C-A hg38:Y:19349160-C-A | *** | ||||||
| hg19:Y:22096973-G-A hg38:Y:19935087-G-A | *** | ||||||
| hg19:Y:22651624-C-A hg38:Y:20489738-C-A | *** | ||||||
| hg19:Y:23040157-TA-T,TAA hg38:Y:20878271-TA-T,TAA | 17×A | *** | |||||
| hg19:Y:23475257-CTTT-C,CTTTT hg38:Y:21313371-CTTT-C,CTTTT | 15×T | *** | |||||
| hg19:Y:23475974-A-T hg38:Y:21314088-A-T | *** | ||||||
| hg19:Y:23808343-T-C hg38:Y:21646457-T-C | *** | ||||||
| hg19:Y:23835614-AAT-A hg38:Y:21673728-AAT-A | *** | ||||||
| hg19:Y:24877503-CTT-C,CTTTT hg38:Y:22731356-CTT-C,CTTTT | g1 | 23×T | *** | ||||
| hg19:Y:27997759-G-A hg38:Y:25851612-G-A | P1_Y2 | *** | |||||
| hg38:Y:56833172-ACTCCA-A,ACTCCT | *** | ||||||
| hg38:Y:56835004-C-A | *** | ||||||
| hg38:Y:56837973-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 457852 | 9199641 | 7553633 | 7484958 |
| Used in age calculations | 9199641 | 7553633 | 7484958 |
| Counts of SNPs | 1 | 1 |
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