Tree Position

R-P312/S116 > Z46521 > Z46516 > ZZ11 > U152/S28 > L2/S139 > Z258 > Z367/S255 > L20/S144 > Z46420 > S3856 > BY3554 > A13338

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRBigY2
B13518
hg19:Y:22257120-A-G hg38:Y:20095234-A-G DYZ19 A*
hg19:Y:13489571-G-A hg38:Y:11333895-G-A A*
hg19:Y:6222153-T-G hg38:Y:6354112-T-G IR3_Dst A*
hg19:Y:6267411-C-T hg38:Y:6399370-C-T IR3_Dst A*
hg19:Y:19903297-A-C hg38:Y:17791417-A-C P5_Prx A*
hg19:Y:19906456-C-G hg38:Y:17794576-C-G P5_Prx A*
hg19:Y:24282974-C-T hg38:Y:22136827-C-T P3_t1 A*
hg19:Y:25886562-T-C hg38:Y:23740415-T-C P1_Y1 A*
hg19:Y:9146921-G-C hg38:Y:9309312-G-C BY38843M9052 Y+
hg19:Y:22469572-G-T hg38:Y:20307686-G-T BY48622 DYZ19 +
hg19:Y:6835714-T-C hg38:Y:6967673-T-C Y45352 YY+
hg19:Y:7151269-C-T hg38:Y:7283228-C-T Y45698 YY+
hg19:Y:7314720-C-A hg38:Y:7446679-C-A Y45894 YY+
hg19:Y:8882614-A-G hg38:Y:9014573-A-G Y48051 Y+
hg19:Y:9414744-G-A hg38:Y:9577135-G-A Y48359 YY+
hg19:Y:13714767-G-T hg38:Y:11559091-G-T BY89593 DYZ17 +
hg19:Y:14174058-A-G hg38:Y:12053352-A-G Y49090 YY+
hg19:Y:14294721-T-A hg38:Y:12174015-T-A Y49313 YY+
hg19:Y:14830278-C-G hg38:Y:12718345-C-G Y49943 YY+
hg19:Y:16199917-G-T hg38:Y:14088037-G-T Y51506 YY+
hg19:Y:16250817-C-T hg38:Y:14138937-C-T Y51580 YY+
hg19:Y:16603934-C-G hg38:Y:14492054-C-G Y52110 YY+
hg19:Y:17524908-T-C hg38:Y:15413028-T-C Y53368 YY+
hg19:Y:17593536-G-T hg38:Y:15481656-G-T Y53466 YY+
hg19:Y:17647815-G-C hg38:Y:15535935-G-C Y53525 YY+
hg19:Y:18772836-G-A hg38:Y:16660956-G-A Y54884 YY+
hg19:Y:21509231-G-A hg38:Y:19347345-G-A Y56816 YY+
hg19:Y:21675866-A-G hg38:Y:19513980-A-G BY134669 YY+
hg19:Y:22303005-T-C hg38:Y:20141119-T-C BY216977 DYZ19 +
hg19:Y:22474004-G-A hg38:Y:20312118-G-A BY53081 DYZ19 +
hg19:Y:22512481-G-A hg38:Y:20350595-G-A BY225873 DYZ19 +
hg19:Y:23047433-A-T hg38:Y:20885547-A-T Y58639 YY+
hg19:Y:23191822-A-G hg38:Y:21029936-A-G Y58881 Y+
hg19:Y:17805523-A-AGT hg38:Y:15693643-A-AGT 11×GT*
hg19:Y:9852977-GGAAGGAAA-G,GGAAGGAAG hg38:Y:10015368-GGAAGGAAA-G,GGAAGGAAG *
hg19:Y:13447496-T-A hg38:Y:11291820-T-A *
hg19:Y:13647416-G-GGAATT hg38:Y:11491740-G-GGAATT DYZ17 *
hg19:Y:14621674-C-CAG hg38:Y:12509872-C-CAG 9×AG*
hg19:Y:58972167-G-C hg38:Y:56826020-G-C **
hg19:Y:26834669-A-G hg38:Y:24688522-A-G P1_g2 **
hg19:Y:15756504-C-A hg38:Y:13644624-C-A FGC13113FGC13134 Y13788 **
hg19:Y:13475435-G-A hg38:Y:11319759-G-A Z10462 **
hg19:Y:15658067-T-TAC hg38:Y:13546187-T-TAC 9×AC**
hg19:Y:22549944-C-A hg38:Y:20388058-C-A BY22100 **
hg19:Y:14080035-G-GAT hg38:Y:11959329-G-GAT 29×AT**
hg19:Y:6978237-C-A hg38:Y:7110196-C-A **
hg19:Y:19189466-G-T hg38:Y:17077586-G-T **
hg19:Y:28656249-C-A hg38:Y:26510102-C-A CTS12650 **
hg19:Y:23831423-G-A hg38:Y:21669537-G-A BY16422 **
hg19:Y:24415718-TTATATATA-T hg38:Y:22269571-TTATATATA-T 31×TA**
hg19:Y:7310555-A-C hg38:Y:7442514-A-C **
hg19:Y:5937632-CCACA-C hg38:Y:6069591-CCACA-C 14×CA**
hg19:Y:26991316-T-C hg38:Y:24845169-T-C P1_r4 **
hg19:Y:58972149-T-A hg38:Y:56826002-T-A **
hg19:Y:13206784-CA-C hg38:Y:11051108-CA-C 14×A**
hg19:Y:19318178-C-T hg38:Y:17206298-C-T 28×T**
hg19:Y:17038319-CTT-C hg38:Y:14926439-CTT-C 13×T**
hg19:Y:21383258-C-A hg38:Y:19221372-C-A **
hg38:Y:10828826-ACCATT-A **
hg19:Y:17071190-CGAAA-C hg38:Y:14959310-CGAAA-C 6×GAAA**
hg19:Y:16489969-C-A hg38:Y:14378089-C-A **
hg19:Y:14236026-CAAAAA-C hg38:Y:12115320-CAAAAA-C 16×A**
hg19:Y:28497107-C-A hg38:Y:26350960-C-A **
hg38:Y:10935499-T-A **
hg38:Y:10990100-C-G **
hg19:Y:15475042-T-A hg38:Y:13363162-T-A **
hg38:Y:10934771-A-T **
hg19:Y:19293763-T-C hg38:Y:17181883-T-C **
hg19:Y:18779345-C-A hg38:Y:16667465-C-A **
hg19:Y:2772319-C-T hg38:Y:2904278-C-T **
hg19:Y:2943926-G-T hg38:Y:3075885-G-T **
hg19:Y:2978898-C-A hg38:Y:3110857-C-A **
hg19:Y:3011358-C-A hg38:Y:3143317-C-A **
hg19:Y:3032384-C-A hg38:Y:3164343-C-A **
hg19:Y:3051220-A-C hg38:Y:3183179-A-C **
hg19:Y:3142318-C-A hg38:Y:3274277-C-A **
hg19:Y:3146590-A-G hg38:Y:3278549-A-G **
hg19:Y:3189298-C-A hg38:Y:3321257-C-A **
hg19:Y:3205614-C-A hg38:Y:3337573-C-A **
hg19:Y:3275468-G-T hg38:Y:3407427-G-T **
hg19:Y:3308506-C-A hg38:Y:3440465-C-A **
hg19:Y:3382849-G-T hg38:Y:3514808-G-T **
hg19:Y:3389154-T-A hg38:Y:3521113-T-A **
hg19:Y:3525308-C-A hg38:Y:3657267-C-A **
hg19:Y:3596217-G-A hg38:Y:3728176-G-A FT100096 **
hg19:Y:3804795-A-T hg38:Y:3936754-A-T **
hg19:Y:3834638-G-T hg38:Y:3966597-G-T **
hg19:Y:3836171-A-G hg38:Y:3968130-A-G **
hg19:Y:3877143-T-C hg38:Y:4009102-T-C **
hg19:Y:3931125-C-A hg38:Y:4063084-C-A **
hg19:Y:3956795-G-T hg38:Y:4088754-G-T **
hg19:Y:3987902-C-CTT hg38:Y:4119861-C-CTT 10×T**
hg19:Y:4065331-T-C hg38:Y:4197290-T-C **
hg19:Y:4138441-G-T hg38:Y:4270400-G-T **
hg19:Y:4212608-G-T hg38:Y:4344567-G-T **
hg19:Y:4244474-C-A hg38:Y:4376433-C-A **
hg19:Y:4272578-A-G hg38:Y:4404537-A-G **
hg19:Y:4286265-C-A hg38:Y:4418224-C-A **
hg19:Y:4300374-C-A hg38:Y:4432333-C-A **
hg19:Y:4357517-C-A hg38:Y:4489476-C-A **
hg19:Y:4370505-G-T hg38:Y:4502464-G-T **
hg19:Y:4408248-T-G hg38:Y:4540207-T-G **
hg19:Y:4412464-C-A hg38:Y:4544423-C-A **
hg19:Y:4447649-C-A hg38:Y:4579608-C-A **
hg19:Y:4509317-A-G hg38:Y:4641276-A-G **
hg19:Y:4553221-T-C hg38:Y:4685180-T-C **
hg19:Y:4616415-T-G hg38:Y:4748374-T-G **
hg19:Y:4634558-CA-C hg38:Y:4766517-CA-C 28×A**
hg19:Y:4703774-A-T hg38:Y:4835733-A-T **
hg19:Y:4847431-TA-T hg38:Y:4979390-TA-T 9×A**
hg19:Y:4909107-CTT-C hg38:Y:5041066-CTT-C 12×T**
hg19:Y:4958624-G-T hg38:Y:5090583-G-T **
hg19:Y:4960062-C-A hg38:Y:5092021-C-A **
hg19:Y:5185392-T-C hg38:Y:5317351-T-C **
hg19:Y:5228256-G-T hg38:Y:5360215-G-T **
hg19:Y:5246663-C-A hg38:Y:5378622-C-A **
hg19:Y:5316933-C-A hg38:Y:5448892-C-A **
hg19:Y:5335913-T-C hg38:Y:5467872-T-C **
hg19:Y:5534684-C-A hg38:Y:5666643-C-A **
hg19:Y:5695256-C-A hg38:Y:5827215-C-A **
hg19:Y:5700056-C-A hg38:Y:5832015-C-A **
hg19:Y:5763407-CT-C hg38:Y:5895366-CT-C **
hg19:Y:5763478-T-C hg38:Y:5895437-T-C **
hg19:Y:5775545-C-A hg38:Y:5907504-C-A **
hg19:Y:5845275-G-T hg38:Y:5977234-G-T **
hg19:Y:5858489-A-G hg38:Y:5990448-A-G **
hg19:Y:5887247-G-AA hg38:Y:6019206-G-AA **
hg19:Y:5889951-C-A hg38:Y:6021910-C-A **
hg19:Y:5927201-G-C hg38:Y:6059160-G-C **
hg19:Y:5927211-A-C hg38:Y:6059170-A-C **
hg19:Y:6025181-C-A hg38:Y:6157140-C-A **
hg19:Y:6135617-G-C hg38:Y:6267576-G-C **
hg19:Y:6160902-G-T hg38:Y:6292861-G-T IR3_Dst **
hg19:Y:6277760-G-C hg38:Y:6409719-G-C IR3_Dst **
hg19:Y:6293412-G-A hg38:Y:6425371-G-A IR3_Dst **
hg19:Y:6402795-C-A hg38:Y:6534754-C-A **
hg19:Y:6434532-C-A hg38:Y:6566491-C-A **
hg19:Y:6465845-C-A hg38:Y:6597804-C-A **
hg19:Y:6506088-C-A hg38:Y:6638047-C-A **
hg19:Y:6534453-G-A hg38:Y:6666412-G-A **
hg19:Y:6580532-C-A hg38:Y:6712491-C-A **
hg19:Y:6664438-T-C hg38:Y:6796397-T-C **
hg19:Y:6698882-T-C hg38:Y:6830841-T-C **
hg19:Y:6774138-C-A hg38:Y:6906097-C-A **
hg19:Y:6798913-C-A hg38:Y:6930872-C-A **
hg19:Y:6816713-CAAAAAAA-C hg38:Y:6948672-CAAAAAAA-C 19×A**
hg19:Y:6911333-C-G hg38:Y:7043292-C-G **
hg19:Y:6911441-T-A hg38:Y:7043400-T-A **
hg19:Y:6922608-C-A hg38:Y:7054567-C-A **
hg19:Y:7039592-C-A hg38:Y:7171551-C-A **
hg19:Y:7043418-G-T hg38:Y:7175377-G-T **
hg19:Y:7061782-A-T hg38:Y:7193741-A-T **
hg19:Y:7085407-C-A hg38:Y:7217366-C-A **
hg19:Y:7095185-C-A hg38:Y:7227144-C-A **
hg19:Y:7138898-C-A hg38:Y:7270857-C-A **
hg19:Y:7150651-C-A hg38:Y:7282610-C-A **
hg19:Y:7185526-T-C hg38:Y:7317485-T-C **
hg19:Y:7211175-T-G hg38:Y:7343134-T-G **
hg19:Y:7217406-C-A hg38:Y:7349365-C-A **
hg19:Y:7217407-A-G hg38:Y:7349366-A-G **
hg19:Y:7217409-C-A hg38:Y:7349368-C-A **
hg19:Y:7217412-A-T hg38:Y:7349371-A-T **
hg19:Y:7217429-G-A hg38:Y:7349388-G-A **
hg19:Y:7217433-T-G hg38:Y:7349392-T-G **
hg19:Y:7217440-A-G hg38:Y:7349399-A-G **
hg19:Y:7217449-T-C hg38:Y:7349408-T-C **
hg19:Y:7235863-G-A hg38:Y:7367822-G-A **
hg19:Y:7235867-T-G hg38:Y:7367826-T-G **
hg19:Y:7257859-C-A hg38:Y:7389818-C-A **
hg19:Y:7286937-C-A hg38:Y:7418896-C-A **
hg19:Y:7322928-C-A hg38:Y:7454887-C-A **
hg19:Y:7345685-T-C hg38:Y:7477644-T-C **
hg19:Y:7384644-T-C hg38:Y:7516603-T-C **
hg19:Y:7433551-A-T hg38:Y:7565510-A-T **
hg19:Y:7475103-C-A hg38:Y:7607062-C-A IR1_L **
hg19:Y:7524702-G-A hg38:Y:7656661-G-A **
hg19:Y:7621159-A-T hg38:Y:7753118-A-T **
hg19:Y:8166694-A-G hg38:Y:8298653-A-G **
hg19:Y:8238295-G-T hg38:Y:8370254-G-T **
hg19:Y:8399019-C-T hg38:Y:8530978-C-T **
hg19:Y:8690470-C-A hg38:Y:8822429-C-A **
hg19:Y:8738898-C-A hg38:Y:8870857-C-A **
hg19:Y:8811243-C-A hg38:Y:8943202-C-A **
hg19:Y:8822568-A-G hg38:Y:8954527-A-G **
hg19:Y:8849961-C-A hg38:Y:8981920-C-A **
hg38:Y:9125478-G-T **
hg19:Y:8980538-G-C hg38:Y:9142929-G-C **
hg19:Y:9025248-G-T hg38:Y:9187639-G-T **
hg19:Y:9048042-C-A hg38:Y:9210433-C-A **
hg19:Y:9444771-C-A hg38:Y:9607162-C-A **
hg19:Y:9577170-A-T hg38:Y:9739561-A-T IR3_Prx **
hg19:Y:9577179-T-A hg38:Y:9739570-T-A IR3_Prx **
hg19:Y:9735643-C-A hg38:Y:9898034-C-A IR3_Prx **
hg19:Y:9885119-C-A hg38:Y:10047510-C-A **
hg19:Y:9939831-C-T hg38:Y:10102222-C-T **
hg19:Y:9940096-T-C hg38:Y:10102487-T-C **
hg19:Y:9996099-C-A hg38:Y:10158490-C-A **
hg19:Y:9996319-C-A hg38:Y:10158710-C-A **
hg19:Y:10022090-C-A hg38:Y:10184481-C-A **
hg19:Y:10023767-C-T hg38:Y:10186158-C-T **
hg19:Y:10045284-A-C hg38:Y:10207675-A-C **
hg19:Y:10079613-C-A hg38:Y:10242004-C-A **
hg38:Y:10651565-C-A **
hg38:Y:10661266-C-G **
hg38:Y:10661521-C-A **
hg38:Y:10663638-A-G **
hg38:Y:10672926-C-A **
hg38:Y:10685609-C-A **
hg38:Y:10685726-C-A **
hg38:Y:10689109-A-T **
hg38:Y:10689119-A-C **
hg38:Y:10752139-G-T **
hg38:Y:10755388-ACTCAT-A **
hg38:Y:10776622-C-G **
hg38:Y:10776631-C-G **
hg38:Y:10779683-C-T **
hg38:Y:10781124-C-A **
hg38:Y:10781500-G-T FTA22541 **
hg38:Y:10783716-C-A **
hg38:Y:10789024-C-G **
hg38:Y:10792656-T-C **
hg38:Y:10792867-C-A **
hg38:Y:10796831-C-A **
hg38:Y:10803915-C-A **
hg38:Y:10814705-A-G **
hg38:Y:10826583-C-CTATTG **
hg38:Y:10833257-C-T **
hg38:Y:10836604-C-A **
hg38:Y:10876963-C-A **
hg38:Y:10885127-C-G **
hg38:Y:10889458-C-A **
hg38:Y:10907435-T-A **
hg38:Y:10907525-G-T **
hg38:Y:10909901-T-A **
hg38:Y:10919774-C-A **
hg38:Y:10930183-C-A **
hg38:Y:10933602-T-C **
hg38:Y:10937469-C-A **
hg38:Y:10953677-C-A **
hg38:Y:10956078-T-C **
hg38:Y:10969530-C-A **
hg38:Y:10983172-A-G FT439146 **
hg38:Y:10983281-C-A **
hg38:Y:10987171-C-A **
hg38:Y:10987740-A-C **
hg38:Y:10990086-T-C FT92183 **
hg38:Y:10990132-A-C **
hg38:Y:10990133-T-TTCCAC **
hg38:Y:10994174-C-A **
hg38:Y:10998411-G-GATGGA **
hg38:Y:11004202-C-A **
hg38:Y:11007408-C-A **
hg38:Y:11020749-C-A **
hg38:Y:11023034-C-T **
hg38:Y:11025436-TTCCACTCCAC-T **
hg38:Y:11034744-C-A **
hg38:Y:11034749-C-A **
hg19:Y:13196509-C-A hg38:Y:11040833-C-A **
hg19:Y:13255568-C-A hg38:Y:11099892-C-A **
hg19:Y:13255841-C-A hg38:Y:11100165-C-A **
hg19:Y:13276719-G-A hg38:Y:11121043-G-A **
hg19:Y:13279056-C-A hg38:Y:11123380-C-A **
hg19:Y:13302377-G-A hg38:Y:11146701-G-A **
hg19:Y:13411876-C-A hg38:Y:11256200-C-A **
hg19:Y:13461169-T-A hg38:Y:11305493-T-A **
hg19:Y:13461215-A-G hg38:Y:11305539-A-G **
hg19:Y:13487038-G-A hg38:Y:11331362-G-A **
hg19:Y:13493181-C-A hg38:Y:11337505-C-A **
hg19:Y:13502699-C-A hg38:Y:11347023-C-A **
hg19:Y:13511649-C-T hg38:Y:11355973-C-T **
hg19:Y:13525684-C-A hg38:Y:11370008-C-A **
hg19:Y:13593891-C-A hg38:Y:11438215-C-A **
hg19:Y:13643965-G-A hg38:Y:11488289-G-A **
hg38:Y:11647076-G-A DYZ17 **
hg38:Y:11656992-C-A DYZ17 **
hg38:Y:11666142-G-A FT220668 DYZ17 **
hg38:Y:11666165-A-G DYZ17 **
hg19:Y:13855010-T-C hg38:Y:11734304-T-C DYZ17 **
hg19:Y:13870634-T-G hg38:Y:11749928-T-G **
hg19:Y:13873792-T-C hg38:Y:11753086-T-C **
hg19:Y:13878775-T-A hg38:Y:11758069-T-A **
hg19:Y:13881251-C-A hg38:Y:11760545-C-A **
hg19:Y:13881413-C-A hg38:Y:11760707-C-A **
hg19:Y:13885913-C-A hg38:Y:11765207-C-A **
hg19:Y:13895840-C-A hg38:Y:11775134-C-A **
hg19:Y:13898665-GA-G hg38:Y:11777959-GA-G **
hg19:Y:13919171-T-A hg38:Y:11798465-T-A **
hg19:Y:14017356-C-A hg38:Y:11896650-C-A **
hg19:Y:14032312-C-A hg38:Y:11911606-C-A **
hg19:Y:14041229-C-A hg38:Y:11920523-C-A **
hg19:Y:14052902-T-C hg38:Y:11932196-T-C **
hg19:Y:14053179-C-A hg38:Y:11932473-C-A **
hg19:Y:14056652-A-T hg38:Y:11935946-A-T **
hg19:Y:14069033-C-A hg38:Y:11948327-C-A **
hg19:Y:14088991-C-A hg38:Y:11968285-C-A **
hg19:Y:14097945-ATTTTT-A hg38:Y:11977239-ATTTTT-A 23×T**
hg19:Y:14158119-G-T hg38:Y:12037413-G-T **
hg19:Y:14159635-C-A hg38:Y:12038929-C-A **
hg19:Y:14160383-G-T hg38:Y:12039677-G-T **
hg19:Y:14198434-C-A hg38:Y:12077728-C-A Y90586 **
hg19:Y:14219671-C-A hg38:Y:12098965-C-A **
hg19:Y:14314274-C-A hg38:Y:12193568-C-A **
hg19:Y:14352579-C-CTT hg38:Y:12231874-C-CTT 14×T**
hg19:Y:14352752-C-A hg38:Y:12232047-C-A **
hg19:Y:14358206-C-T hg38:Y:12237501-C-T **
hg19:Y:14373624-C-A hg38:Y:12252920-C-A **
hg19:Y:14459953-C-T hg38:Y:12339226-C-T **
hg19:Y:14462583-G-T hg38:Y:12341856-G-T **
hg19:Y:14499962-C-A hg38:Y:12388167-C-A **
hg19:Y:14518424-C-A hg38:Y:12406625-C-A **
hg19:Y:14527026-C-A hg38:Y:12415227-C-A **
hg19:Y:14566677-C-A hg38:Y:12454877-C-A **
hg19:Y:14574526-C-A hg38:Y:12462726-C-A **
hg19:Y:14620270-G-A hg38:Y:12508468-G-A **
hg19:Y:14661424-C-A hg38:Y:12549489-C-A **
hg19:Y:14776970-C-A hg38:Y:12665039-C-A **
hg19:Y:14802794-C-A hg38:Y:12690865-C-A **
hg19:Y:14858776-T-C hg38:Y:12746842-T-C **
hg19:Y:14888141-A-G hg38:Y:12776207-A-G **
hg19:Y:14926460-C-T hg38:Y:12814525-C-T **
hg19:Y:14992546-C-A hg38:Y:12880631-C-A **
hg19:Y:15011629-C-A hg38:Y:12899717-C-A **
hg19:Y:15115370-C-A hg38:Y:13003457-C-A **
hg19:Y:15131686-C-A hg38:Y:13019773-C-A **
hg19:Y:15177843-C-A hg38:Y:13065929-C-A **
hg19:Y:15183888-C-A hg38:Y:13071974-C-A **
hg19:Y:15276385-A-T hg38:Y:13164474-A-T **
hg19:Y:15285972-C-A hg38:Y:13174071-C-A **
hg19:Y:15287217-C-T hg38:Y:13175316-C-T **
hg19:Y:15333534-G-T hg38:Y:13221652-G-T **
hg19:Y:15475028-C-T hg38:Y:13363148-C-T M7293 **
hg19:Y:15475041-C-G hg38:Y:13363161-C-G **
hg19:Y:15541690-C-A hg38:Y:13429810-C-A **
hg19:Y:15541726-C-A hg38:Y:13429846-C-A **
hg19:Y:15619317-T-A hg38:Y:13507437-T-A **
hg19:Y:15684652-C-A hg38:Y:13572772-C-A **
hg19:Y:15763204-G-T hg38:Y:13651324-G-T **
hg19:Y:15894502-C-A hg38:Y:13782622-C-A **
hg19:Y:15931820-T-A hg38:Y:13819940-T-A **
hg19:Y:15931840-G-T hg38:Y:13819960-G-T **
hg19:Y:15944249-C-A hg38:Y:13832369-C-A **
hg19:Y:15946597-C-A hg38:Y:13834717-C-A **
hg19:Y:15995408-C-A hg38:Y:13883528-C-A **
hg19:Y:16033461-C-A hg38:Y:13921581-C-A **
hg19:Y:16033648-C-A hg38:Y:13921768-C-A **
hg19:Y:16060468-C-T hg38:Y:13948588-C-T **
hg19:Y:16060477-C-G hg38:Y:13948597-C-G **
hg19:Y:16147479-A-AC hg38:Y:14035599-A-AC P8_Dst **
hg19:Y:16171552-C-A hg38:Y:14059672-C-A **
hg19:Y:16179699-C-A hg38:Y:14067819-C-A **
hg19:Y:16220705-C-A hg38:Y:14108825-C-A **
hg19:Y:16297439-G-A hg38:Y:14185559-G-A **
hg19:Y:16413559-C-A hg38:Y:14301679-C-A **
hg19:Y:16465536-C-A hg38:Y:14353656-C-A **
hg19:Y:16490884-C-A hg38:Y:14379004-C-A **
hg19:Y:16491479-C-A hg38:Y:14379599-C-A FT1939 **
hg19:Y:16515915-T-C hg38:Y:14404035-T-C **
hg19:Y:16522360-A-T hg38:Y:14410480-A-T **
hg19:Y:16522544-C-A hg38:Y:14410664-C-A **
hg19:Y:16619105-C-A hg38:Y:14507225-C-A **
hg19:Y:16624588-T-A hg38:Y:14512708-T-A **
hg19:Y:16707460-G-C hg38:Y:14595580-G-C **
hg19:Y:16785956-C-A hg38:Y:14674076-C-A **
hg19:Y:16968150-C-CA hg38:Y:14856270-C-CA 26×A**
hg19:Y:17030852-T-C hg38:Y:14918972-T-C **
hg19:Y:17083215-C-A hg38:Y:14971335-C-A **
hg19:Y:17095575-G-T hg38:Y:14983695-G-T **
hg19:Y:17270561-C-A hg38:Y:15158681-C-A **
hg19:Y:17512579-C-A hg38:Y:15400699-C-A **
hg19:Y:17552002-T-A hg38:Y:15440122-T-A **
hg19:Y:17561739-AAGC-A hg38:Y:15449859-AAGC-A 5×AGC**
hg19:Y:17567320-C-T hg38:Y:15455440-C-T **
hg19:Y:17568445-C-A hg38:Y:15456565-C-A **
hg19:Y:17597901-C-A hg38:Y:15486021-C-A **
hg19:Y:17598007-G-A hg38:Y:15486127-G-A **
hg19:Y:17667045-T-C hg38:Y:15555165-T-C **
hg19:Y:17676463-T-TAA hg38:Y:15564583-T-TAA 11×A**
hg19:Y:17722978-G-T hg38:Y:15611098-G-T **
hg19:Y:17737662-C-A hg38:Y:15625782-C-A **
hg19:Y:17775066-C-A hg38:Y:15663186-C-A **
hg19:Y:17794206-CTCTT-C hg38:Y:15682326-CTCTT-C **
hg19:Y:17826205-CA-C hg38:Y:15714325-CA-C **
hg19:Y:17829097-T-A hg38:Y:15717217-T-A **
hg19:Y:17838797-T-C hg38:Y:15726917-T-C **
hg19:Y:17916589-C-A hg38:Y:15804709-C-A FT102443 **
hg19:Y:18086114-A-G hg38:Y:15974234-A-G **
hg19:Y:18138276-C-A hg38:Y:16026396-C-A FTB82611 **
hg19:Y:18370848-T-TC hg38:Y:16258968-T-TC P6_Prx **
hg19:Y:18381830-C-A hg38:Y:16269950-C-A P6_Gap **
hg19:Y:18403215-C-A hg38:Y:16291335-C-A P6_Gap **
hg19:Y:18454872-T-G hg38:Y:16342992-T-G P6_Dst **
hg19:Y:18454947-CTT-C hg38:Y:16343067-CTT-C P6_Dst **
hg19:Y:19012485-C-A hg38:Y:16900605-C-A **
hg19:Y:19019853-C-A hg38:Y:16907973-C-A **
hg19:Y:19052096-C-A hg38:Y:16940216-C-A **
hg19:Y:19083020-G-T hg38:Y:16971140-G-T **
hg19:Y:19129070-C-T hg38:Y:17017190-C-T **
hg19:Y:19377169-GGAAA-G hg38:Y:17265289-GGAAA-G 4×GAAA**
hg19:Y:19459382-C-T hg38:Y:17347502-C-T **
hg19:Y:19465735-C-A hg38:Y:17353855-C-A **
hg19:Y:19539673-C-A hg38:Y:17427793-C-A **
hg19:Y:19557374-A-T hg38:Y:17445494-A-T **
hg19:Y:19692991-T-TA hg38:Y:17581111-T-TA P5_Prx **
hg19:Y:19763365-A-AG hg38:Y:17651485-A-AG P5_Prx **
hg19:Y:20019186-T-TC hg38:Y:17907306-T-TC P5_Prx **
hg19:Y:20110581-A-G hg38:Y:17998701-A-G P5_Dst **
hg19:Y:20110732-G-T hg38:Y:17998852-G-T P5_Dst **
hg19:Y:20362565-T-TC hg38:Y:18200679-T-TC P5_Dst **
hg19:Y:20433630-A-G hg38:Y:18271744-A-G P5_Dst **
hg19:Y:21054666-T-A hg38:Y:18892780-T-A **
hg19:Y:21118661-C-A hg38:Y:18956775-C-A **
hg19:Y:21386387-C-A hg38:Y:19224501-C-A **
hg19:Y:21388653-CT-C hg38:Y:19226767-CT-C **
hg19:Y:21388655-CT-C hg38:Y:19226769-CT-C **
hg19:Y:21409082-C-T hg38:Y:19247196-C-T FT213404 **
hg19:Y:21544745-T-A hg38:Y:19382859-T-A **
hg19:Y:21553245-G-T hg38:Y:19391359-G-T **
hg19:Y:21677023-G-A hg38:Y:19515137-G-A **
hg19:Y:21956074-T-A hg38:Y:19794188-T-A **
hg19:Y:21967867-G-T hg38:Y:19805981-G-T **
hg19:Y:22240970-C-A hg38:Y:20079084-C-A DYZ19 **
hg19:Y:22240975-G-T hg38:Y:20079089-G-T DYZ19 **
hg19:Y:22300569-G-T hg38:Y:20138683-G-T BY11100 DYZ19 **
hg19:Y:22461040-C-T hg38:Y:20299154-C-T DYZ19 **
hg19:Y:22483961-C-G hg38:Y:20322075-C-G DYZ19 **
hg19:Y:22487872-C-A hg38:Y:20325986-C-A DYZ19 **
hg19:Y:22487878-T-G hg38:Y:20325992-T-G DYZ19 **
hg19:Y:22547185-T-C hg38:Y:20385299-T-C **
hg19:Y:22765688-G-GA hg38:Y:20603802-G-GA 9×A**
hg19:Y:22775377-C-A hg38:Y:20613491-C-A **
hg19:Y:23005509-G-C hg38:Y:20843623-G-C **
hg19:Y:23009143-C-A hg38:Y:20847257-C-A **
hg19:Y:23128602-A-G hg38:Y:20966716-A-G **
hg19:Y:23176952-C-A hg38:Y:21015066-C-A **
hg19:Y:23252654-C-A hg38:Y:21090768-C-A **
hg19:Y:23285423-T-C hg38:Y:21123537-T-C **
hg19:Y:23291220-C-A hg38:Y:21129334-C-A **
hg19:Y:23311261-C-T hg38:Y:21149375-C-T **
hg19:Y:23316070-G-A hg38:Y:21154184-G-A **
hg19:Y:23341840-T-A hg38:Y:21179954-T-A **
hg19:Y:23372219-CTTT-C hg38:Y:21210333-CTTT-C 13×T**
hg19:Y:23516567-A-T hg38:Y:21354681-A-T **
hg19:Y:23633397-T-G hg38:Y:21471511-T-G **
hg19:Y:23831433-A-G hg38:Y:21669547-A-G **
hg19:Y:23831446-T-G hg38:Y:21669560-T-G **
hg38:Y:21755291-G-T **
hg19:Y:23952970-G-A hg38:Y:21806823-G-A **
hg19:Y:23952972-A-C hg38:Y:21806825-A-C **
hg19:Y:24421095-A-G hg38:Y:22274948-A-G **
hg19:Y:24472421-GTTTTTT-G hg38:Y:22326274-GTTTTTT-G 25×T**
hg19:Y:24512811-C-A hg38:Y:22366664-C-A **
hg19:Y:25099903-C-A hg38:Y:22953756-C-A g1 **
hg19:Y:25939832-G-T hg38:Y:23793685-G-T P1_Y1 **
hg19:Y:26328861-C-A hg38:Y:24182714-C-A P1_Y1 **
hg19:Y:26699226-A-C hg38:Y:24553079-A-C P1_g2 **
hg19:Y:26899391-A-T hg38:Y:24753244-A-T P1_r3 **
hg19:Y:26899397-A-T hg38:Y:24753250-A-T P1_r3 **
hg19:Y:26899410-A-G hg38:Y:24753263-A-G P1_r3 **
hg19:Y:26899419-G-A hg38:Y:24753272-G-A P1_r3 **
hg19:Y:26899436-T-A hg38:Y:24753289-T-A P1_r3 **
hg19:Y:26899442-T-A hg38:Y:24753295-T-A P1_r3 **
hg19:Y:26899454-T-A hg38:Y:24753307-T-A P1_r3 **
hg19:Y:27216729-C-A hg38:Y:25070582-C-A P1_g3 **
hg19:Y:27535295-G-A hg38:Y:25389148-G-A P1_Y2 **
hg19:Y:27570857-C-A hg38:Y:25424710-C-A P1_Y2 **
hg19:Y:27583151-G-T hg38:Y:25437004-G-T P1_Y2 **
hg19:Y:27647584-C-A hg38:Y:25501437-C-A P1_Y2 **
hg19:Y:27737605-AT-A hg38:Y:25591458-AT-A P1_Y2 **
hg19:Y:27762782-C-CAA hg38:Y:25616635-C-CAA P1_Y2 **
hg19:Y:28496934-C-A hg38:Y:26350787-C-A **
hg19:Y:28500719-C-A hg38:Y:26354572-C-A **
hg19:Y:28506261-C-A hg38:Y:26360114-C-A **
hg19:Y:28506327-T-C hg38:Y:26360180-T-C **
hg19:Y:28507454-T-A hg38:Y:26361307-T-A **
hg19:Y:28601607-C-A hg38:Y:26455460-C-A **
hg19:Y:28644425-C-A hg38:Y:26498278-C-A **
hg19:Y:28706155-T-C hg38:Y:26560008-T-C **
hg19:Y:28708179-G-GT hg38:Y:26562032-G-GT 9×T**
hg19:Y:28781514-C-A hg38:Y:26635367-C-A **
hg38:Y:56825991-A-T **
hg38:Y:56826008-T-C **
hg38:Y:56826016-A-C **
hg38:Y:56826029-C-T **
hg38:Y:56835915-A-AGTCCACTCGT **
hg38:Y:56840911-A-T **
hg38:Y:56843102-T-C **
hg38:Y:56848080-C-G **
hg19:Y:22634820-C-T hg38:Y:20472934-C-T 14×T***
hg19:Y:22005300-CTT-C hg38:Y:19843414-CTT-C 13×T***
hg19:Y:58982491-C-A,T hg38:Y:56836344-C-A,T ***
hg19:Y:18636612-CTTTTT-C hg38:Y:16524732-CTTTTT-C 17×T***
hg19:Y:16581436-TAA-T hg38:Y:14469556-TAA-T 15×A***
hg19:Y:14992925-A-G hg38:Y:12881010-A-G ***
hg19:Y:16409013-CTTTT-C hg38:Y:14297133-CTTTT-C 18×T***
hg19:Y:58979255-C-A hg38:Y:56833108-C-A ***
hg19:Y:14657601-G-GA hg38:Y:12545666-G-GA 10×A***
hg38:Y:10921519-T-G ***
hg38:Y:10921531-CATTCT-C ***
hg38:Y:10921542-A-T ***
hg38:Y:10980757-T-C ***
hg19:Y:14245211-AGAAGGAAGGAAGGAAG-A hg38:Y:12124505-AGAAGGAAGGAAGGAAG-A 13×GAAG***
hg19:Y:13856660-TTGGAA-T hg38:Y:11735954-TTGGAA-T DYZ17 5×TGGAA***
hg38:Y:10821847-C-G ***
hg19:Y:2885618-G-T hg38:Y:3017577-G-T ***
hg19:Y:5011280-C-A hg38:Y:5143239-C-A ***
hg19:Y:6368815-G-T hg38:Y:6500774-G-T FT198103 ***
hg19:Y:6768762-G-GAA hg38:Y:6900721-G-GAA 17×A***
hg19:Y:7142488-C-A hg38:Y:7274447-C-A ***
hg19:Y:7142495-G-A hg38:Y:7274454-G-A ***
hg19:Y:7142741-C-T hg38:Y:7274700-C-T ***
hg19:Y:8398840-CAA-C,CAAA hg38:Y:8530799-CAA-C,CAAA 17×A***
hg19:Y:8428933-A-C hg38:Y:8560892-A-C ***
hg19:Y:8901177-C-A hg38:Y:9033136-C-A A15654 ***
hg19:Y:9978955-C-A hg38:Y:10141346-C-A ***
hg38:Y:10746965-TTCAAC-T,TTCCAC ***
hg38:Y:10807363-TCCAC-T ***
hg38:Y:10921505-C-A ***
hg38:Y:10971928-A-T ***
hg38:Y:10973994-C-A ***
hg38:Y:10980657-C-A ***
hg19:Y:13453379-C-A hg38:Y:11297703-C-A ***
hg19:Y:13489492-G-T hg38:Y:11333816-G-T ***
hg19:Y:13611072-G-A hg38:Y:11455396-G-A ***
hg19:Y:14485221-GT-G hg38:Y:12364490-GT-G ***
hg19:Y:14866157-G-A hg38:Y:12754227-G-A ***
hg19:Y:14866159-G-A hg38:Y:12754229-G-A ***
hg19:Y:15157878-AAAAG-A hg38:Y:13045964-AAAAG-A ***
hg38:Y:13228501-CTT-C,CT 19×T***
hg19:Y:15557008-C-A hg38:Y:13445128-C-A ***
hg19:Y:15999765-G-T hg38:Y:13887885-G-T ***
hg19:Y:16095430-T-C hg38:Y:13983550-T-C ***
hg19:Y:17180153-AACACAC-A hg38:Y:15068273-AACACAC-A 23×AC***
hg19:Y:17997316-C-T hg38:Y:15885436-C-T FT154495 P7_Gap ***
hg19:Y:18659940-G-T hg38:Y:16548060-G-T ***
hg19:Y:19272231-T-C hg38:Y:17160351-T-C FT331244 ***
hg19:Y:19415891-C-A hg38:Y:17304011-C-A ***
hg19:Y:20640328-G-T hg38:Y:18478442-G-T P4_Prx ***
hg19:Y:22441863-C-T hg38:Y:20279977-C-T DYZ19 ***
hg19:Y:23439837-G-T hg38:Y:21277951-G-T ***
hg19:Y:28805794-A-G hg38:Y:26659647-A-G ***
hg38:Y:56830007-C-A ***
hg38:Y:56833119-TCCACTCCATC-T,TCCATTCCATT ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: B135181000921081212367982556
Used in age calculations1000921081212367982556
Counts of SNPs1819
Variant counts last updated 2025-01-26 03:40:35.



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