Carroll
BigY2: B143663MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 B143663 |
---|---|---|---|---|---|---|---|---|
13686995-C-A | 11531319-C-A | A* | ||||||
2888656-TTGAGACCATCC-T | 3020615-TTGAGACCATCC-T | + | ||||||
22477091-T-A | 20315205-T-A | BY223731 | DYZ19 | + | ||||
7249675-C-T | 7381634-C-T | BY64175 | Y | Y | + | |||
22233170-C-T | 20071284-C-T | DYZ19 | * | |||||
17279319-A-G | 15167439-A-G | ** | ||||||
17254863-C-A | 15142983-C-A | ** | ||||||
17244395-A-C | 15132515-A-C | ** | ||||||
17231394-C-A | 15119514-C-A | ** | ||||||
17213529-T-G | 15101649-T-G | ** | ||||||
16847756-G-T | 14735876-G-T | ** | ||||||
17181695-C-A | 15069815-C-A | ** | ||||||
17122565-A-T | 15010685-A-T | ** | ||||||
17064912-C-A | 14953032-C-A | ** | ||||||
17342924-G-C | 15231044-G-C | ** | ||||||
17014622-C-A | 14902742-C-A | ** | ||||||
16993616-G-T | 14881736-G-T | ** | ||||||
16926449-T-G | 14814569-T-G | ** | ||||||
15380038-G-T | 13268158-G-T | Y15104 | Y15113 | ** | ||||
16827292-A-C | 14715412-A-C | ** | ||||||
17490192-C-A | 15378312-C-A | ** | ||||||
16421269-C-A | 14309389-C-A | ** | ||||||
16342433-A-T | 14230553-A-T | ** | ||||||
16342429-A-T | 14230549-A-T | ** | ||||||
16342416-A-C | 14230536-A-C | ** | ||||||
16342409-A-T | 14230529-A-T | ** | ||||||
16342405-A-C | 14230525-A-C | ** | ||||||
16274290-C-A | 14162410-C-A | ** | ||||||
16267321-C-A | 14155441-C-A | ** | ||||||
16048931-C-A | 13937051-C-A | ** | ||||||
16047020-G-C | 13935140-G-C | ** | ||||||
15999812-G-T | 13887932-G-T | ** | ||||||
15995423-T-G | 13883543-T-G | ** | ||||||
15918564-C-A | 13806684-C-A | ** | ||||||
17367685-A-C | 15255805-A-C | ** | ||||||
17640890-G-T | 15529010-G-T | ** | ||||||
17538093-C-A | 15426213-C-A | ** | ||||||
18956147-G-T | 16844267-G-T | ** | ||||||
19829284-T-A | 17717404-T-A | P5_Prx | ** | |||||
19745025-T-G | 17633145-T-G | P5_Prx | ** | |||||
19700803-GGTT-G | 17588923-GGTT-G | P5_Prx | ** | |||||
19524576-C-A | 17412696-C-A | ** | ||||||
19459569-T-A | 17347689-T-A | ** | ||||||
19412756-T-C | 17300876-T-C | ** | ||||||
19297742-C-A | 17185862-C-A | ** | ||||||
19252862-G-T | 17140982-G-T | ** | ||||||
19250128-C-A | 17138248-C-A | ** | ||||||
19246901-C-A | 17135021-C-A | ** | ||||||
19168749-A-C | 17056869-A-C | ** | ||||||
19168740-A-C | 17056860-A-C | ** | ||||||
19121871-C-A | 17009991-C-A | ** | ||||||
18930602-C-A | 16818722-C-A | ** | ||||||
15863171-A-T | 13751291-A-T | ** | ||||||
18750072-G-T | 16638192-G-T | ** | ||||||
18619058-G-C | 16507178-G-C | ** | ||||||
18381891-A-C | 16270011-A-C | P6_Gap | ** | |||||
18212470-C-A | 16100590-C-A | ** | ||||||
18138325-G-A | 16026445-G-A | ** | ||||||
18101941-A-G | 15990061-A-G | ** | ||||||
18090068-T-G | 15978188-T-G | ** | ||||||
18040528-C-A | 15928648-C-A | ** | ||||||
18008669-T-A | 15896789-T-A | P7_Dst | ** | |||||
17926578-G-T | 15814698-G-T | ** | ||||||
17737806-C-A | 15625926-C-A | ** | ||||||
17737705-C-A | 15625825-C-A | ** | ||||||
17722914-C-A | 15611034-C-A | ** | ||||||
17667007-G-T | 15555127-G-T | ** | ||||||
15905965-A-C | 13794085-A-C | ** | ||||||
15770633-G-T | 13658753-G-T | ** | ||||||
15844800-C-A | 13732920-C-A | ** | ||||||
13888678-T-C | 11767972-T-C | ** | ||||||
14228710-C-A | 12108004-C-A | ** | ||||||
14225807-C-A | 12105101-C-A | ** | ||||||
14224384-C-A | 12103678-C-A | ** | ||||||
14214940-T-G | 12094234-T-G | ** | ||||||
14213200-G-A | 12092494-G-A | PH1009 | ** | |||||
14065606-C-A | 11944900-C-A | ** | ||||||
14048018-T-A | 11927312-T-A | ** | ||||||
13969343-A-G | 11848637-A-G | ** | ||||||
13961829-T-G | 11841123-T-G | ** | ||||||
13944621-C-A | 11823915-C-A | ** | ||||||
13937203-T-C | 11816497-T-C | ** | ||||||
13928815-C-A | 11808109-C-A | ** | ||||||
13911839-G-T | 11791133-G-T | ** | ||||||
13884911-C-A | 11764205-C-A | ** | ||||||
14395702-C-A | 12274998-C-A | ** | ||||||
13874715-CA-C | 11754009-CA-C | ** | ||||||
13809689-G-C | 11688983-G-C | ** | ||||||
11672930-A-T | ** | |||||||
11659509-C-A | ** | |||||||
11646111-A-T | ** | |||||||
13719633-C-G | 11563957-C-G | ** | ||||||
13710215-A-G | 11554539-A-G | ** | ||||||
13710195-A-T | 11554519-A-T | ** | ||||||
13710176-G-T | 11554500-G-T | ** | ||||||
13710173-C-G | 11554497-C-G | ** | ||||||
14450503-C-A | 12329776-C-A | ** | ||||||
13692764-A-T | 11537088-A-T | ** | ||||||
13603934-C-A | 11448258-C-A | ** | ||||||
13596334-C-A | 11440658-C-A | ** | ||||||
14295424-G-T | 12174718-G-T | ** | ||||||
14421812-C-A | 12301087-C-A | ** | ||||||
19829299-C-A | 17717419-C-A | P5_Prx | 27×T | ** | ||||
15232190-G-T | 13120276-G-T | ** | ||||||
15769242-A-C | 13657362-A-C | ** | ||||||
15761009-A-C | 13649129-A-C | ** | ||||||
15741049-G-T | 13629169-G-T | ** | ||||||
15732228-T-G | 13620348-T-G | ** | ||||||
15729131-C-A | 13617251-C-A | ** | ||||||
15682867-C-A | 13570987-C-A | ** | ||||||
15641642-A-T | 13529762-A-T | ** | ||||||
15631845-T-G | 13519965-T-G | ** | ||||||
15576636-A-C | 13464756-A-C | ** | ||||||
15468362-T-G | 13356482-T-G | ** | ||||||
15334925-C-A | 13223043-C-A | ** | ||||||
15323670-A-T | 13211788-A-T | ** | ||||||
15298261-C-A | 13186360-C-A | ** | ||||||
15280618-T-C | 13168717-T-C | ** | ||||||
15157723-C-T | 13045810-C-T | ** | ||||||
14430552-A-C | 12309825-A-C | ** | ||||||
15080903-CA-C | 12968993-CA-C | 8×A | ** | |||||
15012528-C-G | 12900616-C-G | ** | ||||||
15012521-C-G | 12900609-C-G | ** | ||||||
14756141-G-T | 12644210-G-T | ** | ||||||
14727248-C-A | 12615316-C-A | ** | ||||||
14719709-G-T | 12607777-G-T | ** | ||||||
14693603-A-C | 12581669-A-C | ** | ||||||
14689298-C-A | 12577364-C-A | ** | ||||||
14648646-C-A | 12536711-C-A | ** | ||||||
14635498-T-G | 12523567-T-G | ** | ||||||
14571237-C-A | 12459437-C-A | ** | ||||||
14510138-C-A | 12398343-C-A | ** | ||||||
14483210-C-A | 12362479-C-A | ** | ||||||
14456228-C-A | 12335501-C-A | ** | ||||||
19829286-G-T | 17717406-G-T | P5_Prx | ** | |||||
19835560-A-T | 17723680-A-T | P5_Prx | ** | |||||
19835549-A-T | 17723669-A-T | P5_Prx | ** | |||||
26063341-A-T | 23917194-A-T | P1_Y1 | ** | |||||
26421451-C-A | 24275304-C-A | P1_Y1 | ** | |||||
26421442-G-T | 24275295-G-T | P1_Y1 | ** | |||||
26248310-A-G | 24102163-A-G | P1_Y1 | ** | |||||
26243490-G-T | 24097343-G-T | P1_Y1 | ** | |||||
26243472-A-T | 24097325-A-T | P1_Y1 | ** | |||||
26206293-G-T | 24060146-G-T | P1_Y1 | ** | |||||
26158710-C-A | 24012563-C-A | P1_Y1 | ** | |||||
26158691-T-A | 24012544-T-A | P1_Y1 | ** | |||||
26158676-G-T | 24012529-G-T | P1_Y1 | ** | |||||
26158667-T-A | 24012520-T-A | P1_Y1 | ** | |||||
26158663-T-A | 24012516-T-A | P1_Y1 | ** | |||||
26155288-G-T | 24009141-G-T | P1_Y1 | ** | |||||
26063357-A-T | 23917210-A-T | P1_Y1 | ** | |||||
26063329-A-T | 23917182-A-T | P1_Y1 | ** | |||||
27758508-T-A | 25612361-T-A | P1_Y2 | ** | |||||
26063320-A-T | 23917173-A-T | P1_Y1 | ** | |||||
24629531-T-TG | 22483384-T-TG | P3_t2 | ** | |||||
24421103-C-T | 22274956-C-T | ** | ||||||
24421074-G-A | 22274927-G-A | ** | ||||||
24421062-C-T | 22274915-C-T | ** | ||||||
24421058-C-T | 22274911-C-T | ** | ||||||
24421037-G-A | 22274890-G-A | ** | ||||||
24421031-C-A | 22274884-C-A | ** | ||||||
24332633-T-A | 22186486-T-A | P3_t1 | ** | |||||
24332630-T-A | 22186483-T-A | P3_t1 | ** | |||||
24332625-T-A | 22186478-T-A | P3_t1 | ** | |||||
24332609-T-A | 22186462-T-A | P3_t1 | ** | |||||
24332603-T-A | 22186456-T-A | P3_t1 | ** | |||||
24332597-T-A | 22186450-T-A | P3_t1 | ** | |||||
27758502-T-A | 25612355-T-A | P1_Y2 | ** | |||||
27758517-T-A | 25612370-T-A | P1_Y2 | ** | |||||
21752182-G-T | ** | |||||||
28468760-C-A | 26322613-C-A | ** | ||||||
56843690-G-T | ** | |||||||
58976154-C-T | 56830007-C-T | ** | ||||||
56830006-T-G | ** | |||||||
28814922-G-A | 26668775-G-A | ** | ||||||
28814903-G-A | 26668756-G-A | ** | ||||||
28814901-G-T | 26668754-G-T | ** | ||||||
28814892-T-A | 26668745-T-A | ** | ||||||
28708782-C-A | 26562635-C-A | ** | ||||||
28687391-C-A | 26541244-C-A | ** | ||||||
28662304-G-T | 26516157-G-T | ** | ||||||
28570626-C-A | 26424479-C-A | ** | ||||||
28560107-A-G | 26413960-A-G | ** | ||||||
28485982-C-T | 26339835-C-T | ** | ||||||
28468731-C-A | 26322584-C-A | ** | ||||||
28076472-C-A | 25930325-C-A | P1_Y2 | ** | |||||
28381389-A-T | 26235242-A-T | P1_gr2 | ** | |||||
28381380-C-A | 26235233-C-A | P1_gr2 | ** | |||||
28381374-A-T | 26235227-A-T | P1_gr2 | ** | |||||
28381368-G-T | 26235221-G-T | P1_gr2 | ** | |||||
28381351-C-A | 26235204-C-A | P1_gr2 | ** | |||||
28381341-G-T | 26235194-G-T | P1_gr2 | ** | |||||
28381339-G-T | 26235192-G-T | P1_gr2 | ** | |||||
28088348-C-G | 25942201-C-G | P1_Y2 | ** | |||||
28088329-A-T | 25942182-A-T | P1_Y2 | ** | |||||
28088325-A-T | 25942178-A-T | P1_Y2 | ** | |||||
28088315-A-T | 25942168-A-T | P1_Y2 | ** | |||||
28088299-A-T | 25942152-A-T | P1_Y2 | ** | |||||
28088288-A-T | 25942141-A-T | P1_Y2 | ** | |||||
28076484-C-A | 25930337-C-A | P1_Y2 | ** | |||||
24074034-C-A | 21927887-C-A | P3_b1 | ** | |||||
23831321-G-A | 21669435-G-A | ** | ||||||
19835556-C-G | 17723676-C-G | P5_Prx | ** | |||||
20306528-A-T | 18144642-A-T | P5_Dst | ** | |||||
21491048-C-A | 19329162-C-A | ** | ||||||
21457874-G-C | 19295988-G-C | ** | ||||||
21455484-T-G | 19293598-T-G | ** | ||||||
21281282-C-A | 19119396-C-A | ** | ||||||
21269328-G-GA | 19107442-G-GA | 9×A | ** | |||||
21187784-A-T | 19025898-A-T | ** | ||||||
21109797-A-C | 18947911-A-C | ** | ||||||
21109625-T-A | 18947739-T-A | ** | ||||||
21109624-T-G | 18947738-T-G | ** | ||||||
20840747-T-A | 18678861-T-A | P4_Gap | ** | |||||
20674094-T-TG | 18512208-T-TG | P4_Prx | ** | |||||
20650480-T-G | 18488594-T-G | P4_Prx | ** | |||||
20650453-T-A | 18488567-T-A | P4_Prx | ** | |||||
20306516-A-T | 18144630-A-T | P5_Dst | ** | |||||
21556916-C-A | 19395030-C-A | ** | ||||||
20252881-T-A | 18090995-T-A | P5_Dst | ** | |||||
19996220-T-A | 17884340-T-A | P5_Prx | ** | |||||
19949706-T-G | 17837826-T-G | P5_Prx | ** | |||||
19895139-T-A | 17783259-T-A | P5_Prx | ** | |||||
19846711-G-T | 17734831-G-T | P5_Prx | ** | |||||
19846702-T-A | 17734822-T-A | P5_Prx | ** | |||||
19846700-C-A | 17734820-C-A | P5_Prx | ** | |||||
19846693-T-A | 17734813-T-A | P5_Prx | ** | |||||
19846680-C-A | 17734800-C-A | P5_Prx | ** | |||||
19846678-C-A | 17734798-C-A | P5_Prx | ** | |||||
19846662-C-A | 17734782-C-A | P5_Prx | ** | |||||
19846657-C-A | 17734777-C-A | P5_Prx | ** | |||||
19835571-C-A | 17723691-C-A | P5_Prx | ** | |||||
13496835-G-T | 11341159-G-T | ** | ||||||
21491099-T-G | 19329213-T-G | ** | ||||||
21624795-C-A | 19462909-C-A | ** | ||||||
23460477-G-T | 21298591-G-T | ** | ||||||
22809027-A-T | 20647141-A-T | ** | ||||||
23339257-T-G | 21177371-T-G | ** | ||||||
23262609-C-A | 21100723-C-A | ** | ||||||
23206660-C-A | 21044774-C-A | ** | ||||||
23187661-CTCAGATG-C | 21025775-CTCAGATG-C | ** | ||||||
23137185-T-A | 20975299-T-A | ** | ||||||
23127896-C-A | 20966010-C-A | ** | ||||||
23091504-A-T | 20929618-A-T | ** | ||||||
23035814-T-G | 20873928-T-G | ** | ||||||
22997767-C-A | 20835881-C-A | ** | ||||||
22997699-C-A | 20835813-C-A | ** | ||||||
22950193-CTTTTTT-C | 20788307-CTTTTTT-C | 21×T | ** | |||||
22876572-C-A | 20714686-C-A | ** | ||||||
22810671-C-A | 20648785-C-A | ** | ||||||
22800831-T-A | 20638945-T-A | ** | ||||||
21671996-C-A | 19510110-C-A | ** | ||||||
22800179-G-C | 20638293-G-C | ** | ||||||
22787212-C-A | 20625326-C-A | ** | ||||||
22781678-GGAGA-G | 20619792-GGAGA-G | ** | ||||||
22734415-G-T | 20572529-G-T | ** | ||||||
22715165-AAAG-A | 20553279-AAAG-A | ** | ||||||
22342615-G-A | 20180729-G-A | DYZ19 | ** | |||||
22342611-T-A | 20180725-T-A | DYZ19 | ** | |||||
22215161-T-A | 20053275-T-A | ** | ||||||
22170742-A-T | 20008856-A-T | ** | ||||||
22077252-A-G | 19915366-A-G | ** | ||||||
22064093-C-A | 19902207-C-A | ** | ||||||
22040923-T-A | 19879037-T-A | ** | ||||||
21949014-T-A | 19787128-T-A | ** | ||||||
21886023-T-G | 19724137-T-G | ** | ||||||
13512007-G-T | 11356331-G-T | ** | ||||||
13692786-A-C | 11537110-A-C | ** | ||||||
13467906-T-G | 11312230-T-G | ** | ||||||
5796700-C-A | 5928659-C-A | ** | ||||||
6475337-A-T | 6607296-A-T | ** | ||||||
6434315-A-G | 6566274-A-G | ** | ||||||
6390026-G-A | 6521985-G-A | ** | ||||||
6247157-C-A | 6379116-C-A | IR3_Dst | ** | |||||
6233752-AAT-A | 6365711-AAT-A | IR3_Dst | ** | |||||
6085327-C-A | 6217286-C-A | ** | ||||||
6074501-G-T | 6206460-G-T | ** | ||||||
5976897-T-G | 6108856-T-G | ** | ||||||
5976462-G-T | 6108421-G-T | ** | ||||||
5942688-G-T | 6074647-G-T | ** | ||||||
5935876-T-A | 6067835-T-A | ** | ||||||
5924687-T-A | 6056646-T-A | ** | ||||||
5904573-C-A | 6036532-C-A | ** | ||||||
5781317-G-T | 5913276-G-T | ** | ||||||
6519541-C-A | 6651500-C-A | ** | ||||||
5775721-T-G | 5907680-T-G | ** | ||||||
5755297-C-A | 5887256-C-A | ** | ||||||
5710553-C-A | 5842512-C-A | ** | ||||||
5642964-C-T | 5774923-C-T | ** | ||||||
5609704-C-A | 5741663-C-A | ** | ||||||
5606733-T-A | 5738692-T-A | ** | ||||||
5496496-G-T | 5628455-G-T | ** | ||||||
5496385-C-A | 5628344-C-A | ** | ||||||
5460045-C-A | 5592004-C-A | ** | ||||||
5443897-A-T | 5575856-A-T | ** | ||||||
5410709-G-T | 5542668-G-T | ** | ||||||
5355893-C-A | 5487852-C-A | ** | ||||||
5325792-T-A | 5457751-T-A | ** | ||||||
5264412-G-T | 5396371-G-T | ** | ||||||
6478344-C-A | 6610303-C-A | ** | ||||||
6520139-G-C | 6652098-G-C | ** | ||||||
5204435-C-T | 5336394-C-T | ** | ||||||
7140604-C-A | 7272563-C-A | ** | ||||||
8295609-T-A | 8427568-T-A | ** | ||||||
8080371-G-T | 8212330-G-T | ** | ||||||
8074405-G-T | 8206364-G-T | ** | ||||||
7917004-C-A | 8048963-C-A | ** | ||||||
7670749-C-A | 7802708-C-A | ** | ||||||
7437347-G-A | 7569306-G-A | ** | ||||||
7390152-T-A | 7522111-T-A | ** | ||||||
7390151-A-G | 7522110-A-G | ** | ||||||
7363804-C-A | 7495763-C-A | ** | ||||||
7359923-T-G | 7491882-T-G | ** | ||||||
7332869-T-A | 7464828-T-A | ** | ||||||
7235824-C-A | 7367783-C-A | ** | ||||||
7186746-C-A | 7318705-C-A | ** | ||||||
7148296-C-A | 7280255-C-A | ** | ||||||
7093254-T-A | 7225213-T-A | ** | ||||||
6534883-G-A | 6666842-G-A | ** | ||||||
7041617-C-A | 7173576-C-A | ** | ||||||
7021820-T-C | 7153779-T-C | ** | ||||||
6976012-C-A | 7107971-C-A | ** | ||||||
6944969-AAAG-A | 7076928-AAAG-A | ** | ||||||
6882152-C-A | 7014111-C-A | ** | ||||||
6784460-G-T | 6916419-G-T | ** | ||||||
6784454-A-T | 6916413-A-T | ** | ||||||
6772274-C-A | 6904233-C-A | ** | ||||||
6693031-T-A | 6824990-T-A | ** | ||||||
6687898-A-G | 6819857-A-G | ** | ||||||
6651287-T-C | 6783246-T-C | ** | ||||||
6646273-A-C | 6778232-A-C | ** | ||||||
6619619-C-A | 6751578-C-A | ** | ||||||
6580660-G-A | 6712619-G-A | ** | ||||||
5221090-C-A | 5353049-C-A | ** | ||||||
5172424-T-G | 5304383-T-G | ** | ||||||
8673326-C-A | 8805285-C-A | ** | ||||||
2948130-T-C | 3080089-T-C | ** | ||||||
3779141-G-T | 3911100-G-T | ** | ||||||
3777564-C-A | 3909523-C-A | ** | ||||||
3775774-A-G | 3907733-A-G | ** | ||||||
3614346-T-C | 3746305-T-C | ** | ||||||
3610266-C-A | 3742225-C-A | ** | ||||||
3559778-C-A | 3691737-C-A | ** | ||||||
3550289-C-A | 3682248-C-A | ** | ||||||
3250655-T-G | 3382614-T-G | ** | ||||||
3225396-A-G | 3357355-A-G | ** | ||||||
3225340-G-T | 3357299-G-T | ** | ||||||
3179021-C-A | 3310980-C-A | ** | ||||||
3078475-T-A | 3210434-T-A | ** | ||||||
3074882-A-T | 3206841-A-T | ** | ||||||
2948121-T-A | 3080080-T-A | ** | ||||||
3848543-C-A | 3980502-C-A | ** | ||||||
2856822-T-A | 2988781-T-A | ** | ||||||
2856805-TTG-T | 2988764-TTG-T | ** | ||||||
2812886-T-C | 2944845-T-C | ** | ||||||
2708331-C-A | 2840290-C-A | ** | ||||||
2701268-G-T | 2833227-G-T | ** | ||||||
13604301-C-A | 11448625-C-A | ** | ||||||
23439905-G-GTTT | 21278019-G-GTTT | 15×T | ** | |||||
17821975-C-A | 15710095-C-A | ** | ||||||
7163035-C-A | 7294994-C-A | ** | ||||||
18619061-C-A | 16507181-C-A | ** | ||||||
22342623-C-T | 20180737-C-T | DYZ19 | ** | |||||
22342622-C-A | 20180736-C-A | DYZ19 | ** | |||||
13263043-G-T | 11107367-G-T | ** | ||||||
20587808-AAT-A | 18425922-AAT-A | P5_Dst | 10×AT | ** | ||||
3847252-C-A | 3979211-C-A | ** | ||||||
3876960-C-A | 4008919-C-A | ** | ||||||
5103451-C-A | 5235410-C-A | ** | ||||||
4433958-C-A | 4565917-C-A | ** | ||||||
5073804-C-A | 5205763-C-A | ** | ||||||
5013620-G-T | 5145579-G-T | ** | ||||||
5007642-C-A | 5139601-C-A | ** | ||||||
5007614-C-A | 5139573-C-A | ** | ||||||
4955325-C-A | 5087284-C-A | ** | ||||||
4703881-C-A | 4835840-C-A | ** | ||||||
4567017-A-T | 4698976-A-T | ** | ||||||
4506203-G-T | 4638162-G-T | ** | ||||||
4498177-TGA-T | 4630136-TGA-T | ** | ||||||
4462354-G-T | 4594313-G-T | ** | ||||||
4460879-T-A | 4592838-T-A | ** | ||||||
4445806-T-G | 4577765-T-G | ** | ||||||
4445795-T-G | 4577754-T-G | ** | ||||||
4437479-G-T | 4569438-G-T | ** | ||||||
4423375-G-T | 4555334-G-T | ** | ||||||
3913663-G-T | 4045622-G-T | ** | ||||||
4372217-T-G | 4504176-T-G | ** | ||||||
4357615-TTAAG-T | 4489574-TTAAG-T | ** | ||||||
4304548-A-T | 4436507-A-T | ** | ||||||
4304418-G-T | 4436377-G-T | ** | ||||||
4302157-T-C | 4434116-T-C | ** | ||||||
4277786-C-A | 4409745-C-A | ** | ||||||
4271695-C-A | 4403654-C-A | ** | ||||||
4241817-C-A | 4373776-C-A | ** | ||||||
4240781-A-T | 4372740-A-T | ** | ||||||
4159855-T-A | 4291814-T-A | ** | ||||||
4153772-C-A | 4285731-C-A | ** | ||||||
4148687-A-T | 4280646-A-T | ** | ||||||
4088487-G-T | 4220446-G-T | ** | ||||||
4078454-T-G | 4210413-T-G | ** | ||||||
8325530-C-A | 8457489-C-A | ** | ||||||
7996104-C-A | 8128063-C-A | ** | ||||||
8692175-T-G | 8824134-T-G | ** | ||||||
10866137-C-A | ** | |||||||
10940835-C-A | ** | |||||||
10935998-G-T | ** | |||||||
10935948-G-T | ** | |||||||
10924943-G-T | ** | |||||||
10903682-G-A | ** | |||||||
10898477-A-C | ** | |||||||
10884852-C-A | ** | |||||||
10882386-A-G | ** | |||||||
10871034-CTCCAT-C | ** | |||||||
10868569-C-T | ** | |||||||
10868565-T-G | ** | |||||||
10868561-C-T | ** | |||||||
10868551-C-A | ** | |||||||
10861259-T-G | ** | |||||||
10949545-C-A | ** | |||||||
10861223-T-G | ** | |||||||
10852564-C-A | ** | |||||||
10851399-G-T | ** | |||||||
10848953-A-C | FT91868 | ** | ||||||
10848944-C-A | ** | |||||||
10841356-C-A | ** | |||||||
10841064-T-G | ** | |||||||
10837651-C-A | ** | |||||||
10837335-C-A | ** | |||||||
10837294-C-A | ** | |||||||
10826635-G-T | ** | |||||||
10826299-T-G | ** | |||||||
10825268-T-A | ** | |||||||
10824493-T-C | ** | |||||||
10949448-C-A | ** | |||||||
10958776-C-A | ** | |||||||
10812016-C-A | ** | |||||||
11021623-A-T | ** | |||||||
13361438-G-T | 11205762-G-T | ** | ||||||
13360854-C-A | 11205178-C-A | ** | ||||||
13307209-C-A | 11151533-C-A | ** | ||||||
13296033-C-A | 11140357-C-A | ** | ||||||
13287701-T-G | 11132025-T-G | ** | ||||||
13258505-A-T | 11102829-A-T | ** | ||||||
13255867-C-A | 11100191-C-A | ** | ||||||
13238035-A-T | 11082359-A-T | ** | ||||||
13200576-T-G | 11044900-T-G | ** | ||||||
13200488-T-G | 11044812-T-G | ** | ||||||
11027524-T-G | ** | |||||||
11024824-TACATGTCA-T | ** | |||||||
11022687-C-A | ** | |||||||
11014685-C-T | ** | |||||||
10962910-ATCCATTCCATTCCAT-A | ** | |||||||
11014539-T-G | ** | |||||||
11010247-T-A | ** | |||||||
11006176-C-T | ** | |||||||
11002115-T-C | ** | |||||||
11000255-C-T | ** | |||||||
10991179-C-A | FT439454 | ** | ||||||
10985069-C-G | ** | |||||||
10985049-C-G | ** | |||||||
10980591-CCACTA-C | ** | |||||||
10980376-T-A | ** | |||||||
10971562-C-A | ** | |||||||
10970927-C-A | ** | |||||||
10969710-C-A | ** | |||||||
10964776-C-G | ** | |||||||
10816142-C-A | ** | |||||||
10837289-C-A | ** | |||||||
56873911-G-T | ** | |||||||
9416722-C-A | 9579113-C-A | ** | ||||||
10014977-TCTGG-T | 10177368-TCTGG-T | ** | ||||||
10003162-A-C | 10165553-A-C | ** | ||||||
9125438-C-CT | ** | |||||||
9900348-T-A | 10062739-T-A | ** | ||||||
8856116-C-T | 8988075-C-T | FT163 | ** | |||||
9892571-C-A | 10054962-C-A | ** | ||||||
9577161-C-A | 9739552-C-A | IR3_Prx | ** | |||||
9511485-G-T | 9673876-G-T | ** | ||||||
9433828-G-T | 9596219-G-T | ** | ||||||
9116843-A-C | 9279234-A-C | ** | ||||||
10040867-T-A | 10203258-T-A | ** | ||||||
9121967-C-A | ** | |||||||
9047563-C-A | 9209954-C-A | ** | ||||||
9040887-CAAAAAAAAAAAAAAAAAA-C | 9203278-CAAAAAAAAAAAAAAAAAA-C | 39×A | ** | |||||
9040907-A-T | 9203298-A-T | ** | ||||||
9040905-A-T | 9203296-A-T | ** | ||||||
9040903-A-T | 9203294-A-T | ** | ||||||
9040901-A-T | 9203292-A-T | ** | ||||||
9122377-C-A | ** | |||||||
9040899-A-T | 9203290-A-T | ** | ||||||
8987811-G-T | 9150202-G-T | ** | ||||||
8849812-T-G | 8981771-T-G | ** | ||||||
9942375-G-C | 10104766-G-C | ** | ||||||
10616893-C-A | ** | |||||||
10758532-T-G | ** | |||||||
10801730-TCCTTTTCATTCCACA-T | ** | |||||||
10797301-G-A | ** | |||||||
10796107-C-CATACA | ** | |||||||
10789284-C-A | ** | |||||||
10785283-C-CTTA | ** | |||||||
8699235-A-C | 8831194-A-C | ** | ||||||
10785282-C-CTCTTCAG | ** | |||||||
10771273-C-A | ** | |||||||
10758586-T-G | ** | |||||||
10768437-A-G | ** | |||||||
8735613-T-A | 8867572-T-A | ** | ||||||
10691931-T-A | ** | |||||||
10653863-C-A | ** | |||||||
10662455-C-A | ** | |||||||
8822360-G-T | 8954319-G-T | ** | ||||||
10673655-G-T | ** | |||||||
10677191-T-A | ** | |||||||
8974135-A-T | 9136526-A-T | ** | ||||||
8736512-C-A | 8868471-C-A | ** | ||||||
11033213-C-T | *** | |||||||
18951813-C-A | 16839933-C-A | *** | ||||||
19007692-C-A | 16895812-C-A | *** | ||||||
28798793-A-C | 26652646-A-C | *** | ||||||
56836211-G-T | *** | |||||||
11035608-C-A | *** | |||||||
13404799-C-A | 11249123-C-A | *** | ||||||
14294342-G-GAAA | 12173636-G-GAAA | 13×A | *** | |||||
8913170-C-A | 9045129-C-A | *** | ||||||
18839340-T-C | 16727460-T-C | *** | ||||||
11022053-C-G,T | *** | |||||||
56839498-G-T | *** | |||||||
10808580-C-G | *** | |||||||
7299606-G-T | 7431565-G-T | *** | ||||||
10916249-G-T | *** | |||||||
19411964-AAGAAAG-A,AAGAAAGAAAGAAAG | 17300084-AAGAAAG-A,AAGAAAGAAAGAAAG | *** | ||||||
10777269-G-T | *** | |||||||
10776525-T-G | *** | |||||||
4929176-G-T | 5061135-G-T | *** | ||||||
16938218-CTTTT-C,CTTT | 14826338-CTTTT-C,CTTT | 19×T | *** | |||||
10663205-C-A | *** | |||||||
6359640-TA-T,TAA | 6491599-TA-T,TAA | 22×A | *** | |||||
24466000-C-A | 22319853-C-A | *** | ||||||
9806734-T-C | 9969125-T-C | *** | ||||||
18401506-C-A | 16289626-C-A | P6_Gap | *** | |||||
21201082-C-A | 19039196-C-A | *** | ||||||
14515172-T-G | 12403377-T-G | *** | ||||||
10804004-T-C | *** | |||||||
20998335-G-A,T | 18836449-G-A,T | P4_Dst | *** | |||||
14379134-T-G | 12258430-T-G | *** | ||||||
17929280-G-T | 15817400-G-T | *** | ||||||
17946903-GTTTTTTTTTTTGTTTGTTTTTTTTTTTTTTTT-G | 15835023-GTTTTTTTTTTTGTTTGTTTTTTTTTTTTTTTT-G | 11×T | *** | |||||
3550598-A-AAAC,C | 3682557-A-AAAC,C | *** | ||||||
7142763-C-A | 7274722-C-A | *** | ||||||
10961390-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: B143663 | 9970597 | 8123457 | 7995642 |
Used in age calculations | 9970597 | 8123457 | 7995642 |
Counts of SNPs | 1 | 1 |
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