McClanahan
BigY2: 41405MDKA Birth:
Northern IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 41405 |
|---|---|---|---|---|---|---|---|
| hg19:Y:26160599-G-A hg38:Y:24014452-G-A | P1_Y1 | A* | |||||
| hg19:Y:21930876-G-A hg38:Y:19768990-G-A | BY136531 | Y | Y | + | |||
| hg19:Y:6890305-A-T hg38:Y:7022264-A-T | Z1909 Y61300 | Z1911 | ** | ||||
| hg19:Y:15400167-C-A hg38:Y:13288287-C-A | 14×A | ** | |||||
| hg19:Y:15513660-A-G hg38:Y:13401780-A-G | ** | ||||||
| hg19:Y:6787176-G-A hg38:Y:6919135-G-A | BY14547 FGC63590 | ** | |||||
| hg19:Y:13466444-A-T hg38:Y:11310768-A-T | ** | ||||||
| hg19:Y:28772910-C-A hg38:Y:26626763-C-A | ** | ||||||
| hg19:Y:8690659-C-A hg38:Y:8822618-C-A | ** | ||||||
| hg19:Y:2651899-T-G hg38:Y:2783858-T-G | ** | ||||||
| hg19:Y:2669792-A-T hg38:Y:2801751-A-T | ** | ||||||
| hg19:Y:2669815-T-G hg38:Y:2801774-T-G | ** | ||||||
| hg19:Y:2832001-C-A hg38:Y:2963960-C-A | ** | ||||||
| hg19:Y:2907532-A-T hg38:Y:3039491-A-T | ** | ||||||
| hg19:Y:2960163-A-C hg38:Y:3092122-A-C | ** | ||||||
| hg19:Y:3046692-A-T hg38:Y:3178651-A-T | ** | ||||||
| hg19:Y:3232584-G-T hg38:Y:3364543-G-T | ** | ||||||
| hg19:Y:3832289-A-T hg38:Y:3964248-A-T | ** | ||||||
| hg19:Y:3903056-C-A hg38:Y:4035015-C-A | ** | ||||||
| hg19:Y:4179200-C-T hg38:Y:4311159-C-T | ** | ||||||
| hg19:Y:4244832-C-A hg38:Y:4376791-C-A | ** | ||||||
| hg19:Y:4408487-C-A hg38:Y:4540446-C-A | ** | ||||||
| hg19:Y:4417423-C-A hg38:Y:4549382-C-A | ** | ||||||
| hg19:Y:4428461-A-C hg38:Y:4560420-A-C | ** | ||||||
| hg19:Y:4444860-G-T hg38:Y:4576819-G-T | ** | ||||||
| hg19:Y:4662646-C-A hg38:Y:4794605-C-A | ** | ||||||
| hg19:Y:4674238-C-A hg38:Y:4806197-C-A | ** | ||||||
| hg19:Y:4687810-C-A hg38:Y:4819769-C-A | ** | ||||||
| hg19:Y:4908120-G-T hg38:Y:5040079-G-T | ** | ||||||
| hg19:Y:5107406-A-G hg38:Y:5239365-A-G | ** | ||||||
| hg19:Y:5127473-T-C hg38:Y:5259432-T-C | ** | ||||||
| hg19:Y:5368289-A-T hg38:Y:5500248-A-T | ** | ||||||
| hg19:Y:5542218-G-T hg38:Y:5674177-G-T | ** | ||||||
| hg19:Y:5554913-G-T hg38:Y:5686872-G-T | ** | ||||||
| hg19:Y:5635092-G-T hg38:Y:5767051-G-T | ** | ||||||
| hg19:Y:5796235-C-A hg38:Y:5928194-C-A | ** | ||||||
| hg19:Y:5858296-T-A hg38:Y:5990255-T-A | ** | ||||||
| hg19:Y:5859079-C-A hg38:Y:5991038-C-A | ** | ||||||
| hg19:Y:5874198-T-C hg38:Y:6006157-T-C | ** | ||||||
| hg19:Y:6130224-A-T hg38:Y:6262183-A-T | ** | ||||||
| hg19:Y:6130233-C-A hg38:Y:6262192-C-A | ** | ||||||
| hg19:Y:6130248-A-T hg38:Y:6262207-A-T | ** | ||||||
| hg19:Y:6262640-AC-A hg38:Y:6394599-AC-A | IR3_Dst | ** | |||||
| hg19:Y:6326199-A-T hg38:Y:6458158-A-T | IR3_Dst | ** | |||||
| hg19:Y:6326211-C-CTG hg38:Y:6458170-C-CTG | IR3_Dst | ** | |||||
| hg19:Y:6363899-T-A hg38:Y:6495858-T-A | ** | ||||||
| hg19:Y:6479035-A-C hg38:Y:6610994-A-C | ** | ||||||
| hg19:Y:6693356-T-C hg38:Y:6825315-T-C | ** | ||||||
| hg19:Y:6773870-C-A hg38:Y:6905829-C-A | ** | ||||||
| hg19:Y:6828736-C-A hg38:Y:6960695-C-A | ** | ||||||
| hg19:Y:7028633-A-C hg38:Y:7160592-A-C | ** | ||||||
| hg19:Y:7099222-A-T hg38:Y:7231181-A-T | ** | ||||||
| hg19:Y:7166877-A-T hg38:Y:7298836-A-T | ** | ||||||
| hg19:Y:7311402-C-A hg38:Y:7443361-C-A | ** | ||||||
| hg19:Y:7353595-A-T hg38:Y:7485554-A-T | ** | ||||||
| hg19:Y:7395237-A-C hg38:Y:7527196-A-C | ** | ||||||
| hg19:Y:7464085-T-G hg38:Y:7596044-T-G | IR1_L | ** | |||||
| hg19:Y:7508506-G-A hg38:Y:7640465-G-A | ** | ||||||
| hg19:Y:7755248-A-C hg38:Y:7887207-A-C | ** | ||||||
| hg19:Y:7857808-C-A hg38:Y:7989767-C-A | ** | ||||||
| hg19:Y:7868645-A-G hg38:Y:8000604-A-G | ** | ||||||
| hg19:Y:7869105-A-C hg38:Y:8001064-A-C | ** | ||||||
| hg19:Y:8073874-C-A hg38:Y:8205833-C-A | ** | ||||||
| hg19:Y:8093290-C-A hg38:Y:8225249-C-A | ** | ||||||
| hg19:Y:8238318-C-A hg38:Y:8370277-C-A | ** | ||||||
| hg19:Y:8698901-C-G hg38:Y:8830860-C-G | ** | ||||||
| hg19:Y:8749245-A-T hg38:Y:8881204-A-T | ** | ||||||
| hg19:Y:8844585-T-A hg38:Y:8976544-T-A | ** | ||||||
| hg19:Y:8848201-A-T hg38:Y:8980160-A-T | ** | ||||||
| hg19:Y:8988699-A-T hg38:Y:9151090-A-T | ** | ||||||
| hg19:Y:9028467-C-A hg38:Y:9190858-C-A | ** | ||||||
| hg19:Y:9089079-T-C hg38:Y:9251470-T-C | ** | ||||||
| hg19:Y:9089080-AT-A hg38:Y:9251471-AT-A | ** | ||||||
| hg19:Y:9094651-C-G hg38:Y:9257042-C-G | ** | ||||||
| hg19:Y:9138328-C-A hg38:Y:9300719-C-A | ** | ||||||
| hg19:Y:9398034-C-A hg38:Y:9560425-C-A | ** | ||||||
| hg19:Y:9481336-T-A hg38:Y:9643727-T-A | ** | ||||||
| hg19:Y:9503201-C-A hg38:Y:9665592-C-A | ** | ||||||
| hg19:Y:9821611-C-A hg38:Y:9984002-C-A | ** | ||||||
| hg19:Y:10025022-G-A hg38:Y:10187413-G-A | ** | ||||||
| hg19:Y:10069678-G-T hg38:Y:10232069-G-T | ** | ||||||
| hg38:Y:10653902-C-T | ** | ||||||
| hg38:Y:10653916-TTCAAC-T | ** | ||||||
| hg38:Y:10653959-A-T | ** | ||||||
| hg38:Y:10655377-A-C | ** | ||||||
| hg38:Y:10657234-C-A | ** | ||||||
| hg38:Y:10658555-T-G | ** | ||||||
| hg38:Y:10664817-T-A | ** | ||||||
| hg38:Y:10666467-C-T | ** | ||||||
| hg38:Y:10667265-T-G | ** | ||||||
| hg38:Y:10668583-T-G | ** | ||||||
| hg38:Y:10669231-T-C | ** | ||||||
| hg38:Y:10671441-A-T | ** | ||||||
| hg38:Y:10671968-T-C | ** | ||||||
| hg38:Y:10687951-A-G | ** | ||||||
| hg38:Y:10688001-A-G | ** | ||||||
| hg38:Y:10688039-C-A | ** | ||||||
| hg38:Y:10688185-C-A | ** | ||||||
| hg38:Y:10688195-C-A | ** | ||||||
| hg38:Y:10688209-C-A | ** | ||||||
| hg38:Y:10691399-T-TGTGC | ** | ||||||
| hg38:Y:10691453-A-C | ** | ||||||
| hg38:Y:10693844-C-A | ** | ||||||
| hg38:Y:10744290-T-A | ** | ||||||
| hg38:Y:10748509-G-T | ** | ||||||
| hg38:Y:10748943-A-T | ** | ||||||
| hg38:Y:10755028-G-A | ** | ||||||
| hg38:Y:10755038-G-A | ** | ||||||
| hg38:Y:10755148-G-T | ** | ||||||
| hg38:Y:10762233-T-G | ** | ||||||
| hg38:Y:10769364-C-A | ** | ||||||
| hg38:Y:10770794-T-A | ** | ||||||
| hg38:Y:10799731-T-A | ** | ||||||
| hg38:Y:10799732-T-G | ** | ||||||
| hg38:Y:10799736-T-A | ** | ||||||
| hg38:Y:10799741-G-T | FT431739 | ** | |||||
| hg38:Y:10801873-C-A | ** | ||||||
| hg38:Y:10801903-C-A | ** | ||||||
| hg38:Y:10804730-G-T | ** | ||||||
| hg38:Y:10804750-T-A | ** | ||||||
| hg38:Y:10813167-T-G | ** | ||||||
| hg38:Y:10813176-C-T | ** | ||||||
| hg38:Y:10826900-A-T | ** | ||||||
| hg38:Y:10826901-T-G | ** | ||||||
| hg38:Y:10826920-A-C | ** | ||||||
| hg38:Y:10835454-C-A | ** | ||||||
| hg38:Y:10847052-TCACTC-T | ** | ||||||
| hg38:Y:10847075-T-A | ** | ||||||
| hg38:Y:10864845-T-G | ** | ||||||
| hg38:Y:10866421-T-A | ** | ||||||
| hg38:Y:10866446-T-A | ** | ||||||
| hg38:Y:10872692-T-G | ** | ||||||
| hg38:Y:10885792-T-G | ** | ||||||
| hg38:Y:10887935-A-T | ** | ||||||
| hg38:Y:10889511-C-T | ** | ||||||
| hg38:Y:10889536-G-T | ** | ||||||
| hg38:Y:10889563-A-T | ** | ||||||
| hg38:Y:10895522-G-T | ** | ||||||
| hg38:Y:10895591-T-A | ** | ||||||
| hg38:Y:10911208-T-C | ** | ||||||
| hg38:Y:10916765-T-C | ** | ||||||
| hg38:Y:10916771-G-T | ** | ||||||
| hg38:Y:10916774-G-A | ** | ||||||
| hg38:Y:10916796-A-C | ** | ||||||
| hg38:Y:10921140-C-G | ** | ||||||
| hg38:Y:10922388-C-A | ** | ||||||
| hg38:Y:10934728-T-TTC | ** | ||||||
| hg38:Y:10938303-A-G | ** | ||||||
| hg38:Y:10938309-C-T | ** | ||||||
| hg38:Y:10938311-C-G | ** | ||||||
| hg38:Y:10938324-C-T | ** | ||||||
| hg38:Y:10938329-G-C | ** | ||||||
| hg38:Y:10938331-C-T | ** | ||||||
| hg38:Y:10938344-T-C | ** | ||||||
| hg38:Y:10938346-C-G | ** | ||||||
| hg38:Y:10938349-T-C | ** | ||||||
| hg38:Y:10938373-A-T | ** | ||||||
| hg38:Y:10938663-G-A | ** | ||||||
| hg38:Y:10942656-C-T | ** | ||||||
| hg38:Y:10942657-C-CA | ** | ||||||
| hg38:Y:10944224-C-A | ** | ||||||
| hg38:Y:10945756-T-G | FT437682 | ** | |||||
| hg38:Y:10946551-C-A | ** | ||||||
| hg38:Y:10947574-C-A | ** | ||||||
| hg38:Y:10956143-T-A | ** | ||||||
| hg38:Y:10963836-G-T | ** | ||||||
| hg38:Y:10970850-C-A | ** | ||||||
| hg38:Y:10970864-C-A | ** | ||||||
| hg38:Y:10979938-A-T | ** | ||||||
| hg38:Y:10984828-G-C | ** | ||||||
| hg38:Y:10987561-T-G | ** | ||||||
| hg38:Y:10992284-T-A | ** | ||||||
| hg38:Y:10992292-T-G | ** | ||||||
| hg38:Y:10997148-T-TA | ** | ||||||
| hg38:Y:10997167-T-C | ** | ||||||
| hg38:Y:10997172-T-C | ** | ||||||
| hg38:Y:10997377-C-A | ** | ||||||
| hg38:Y:11004921-T-C | ** | ||||||
| hg38:Y:11004949-C-T | FT393354 | ** | |||||
| hg38:Y:11004951-C-G | ** | ||||||
| hg38:Y:11012279-C-T | ** | ||||||
| hg38:Y:11012297-G-A | ** | ||||||
| hg38:Y:11012298-CA-C | ** | ||||||
| hg38:Y:11012302-C-CCCACTT | ** | ||||||
| hg38:Y:11012320-T-G | ** | ||||||
| hg38:Y:11013873-CATTCA-C | ** | ||||||
| hg38:Y:11015005-TATTCC-T | ** | ||||||
| hg38:Y:11025153-C-A | ** | ||||||
| hg38:Y:11025758-T-A | ** | ||||||
| hg38:Y:11026906-C-T | ** | ||||||
| hg38:Y:11030217-C-G | ** | ||||||
| hg38:Y:11030249-T-C | ** | ||||||
| hg38:Y:11035384-C-G | ** | ||||||
| hg38:Y:11035392-C-T | ** | ||||||
| hg38:Y:11035418-A-C | ** | ||||||
| hg19:Y:13218987-AG-T hg38:Y:11063311-AG-T | ** | ||||||
| hg19:Y:13223660-G-A hg38:Y:11067984-G-A | ** | ||||||
| hg19:Y:13223662-G-A hg38:Y:11067986-G-A | ** | ||||||
| hg19:Y:13237525-C-A hg38:Y:11081849-C-A | ** | ||||||
| hg19:Y:13280490-C-A hg38:Y:11124814-C-A | ** | ||||||
| hg19:Y:13313810-C-A hg38:Y:11158134-C-A | ** | ||||||
| hg19:Y:13324844-C-A hg38:Y:11169168-C-A | ** | ||||||
| hg19:Y:13441659-C-A hg38:Y:11285983-C-A | ** | ||||||
| hg19:Y:13461244-A-T hg38:Y:11305568-A-T | ** | ||||||
| hg19:Y:13461252-G-A hg38:Y:11305576-G-A | ** | ||||||
| hg19:Y:13491013-C-A hg38:Y:11335337-C-A | ** | ||||||
| hg19:Y:13543581-A-G hg38:Y:11387905-A-G | ** | ||||||
| hg19:Y:13582716-T-G hg38:Y:11427040-T-G | ** | ||||||
| hg19:Y:13588558-G-A hg38:Y:11432882-G-A | ** | ||||||
| hg19:Y:13592591-C-T hg38:Y:11436915-C-T | ** | ||||||
| hg19:Y:13594629-T-G hg38:Y:11438953-T-G | ** | ||||||
| hg19:Y:13634376-G-A hg38:Y:11478700-G-A | ** | ||||||
| hg19:Y:13717508-A-C hg38:Y:11561832-A-C | DYZ17 | ** | |||||
| hg19:Y:13720683-G-T hg38:Y:11565007-G-T | DYZ17 | ** | |||||
| hg38:Y:11669538-C-A | DYZ17 | ** | |||||
| hg38:Y:11676267-C-T | FT451413 | DYZ17 | ** | ||||
| hg19:Y:13856338-G-GT hg38:Y:11735632-G-GT | DYZ17 | ** | |||||
| hg19:Y:13885879-G-T hg38:Y:11765173-G-T | ** | ||||||
| hg19:Y:13894091-C-A hg38:Y:11773385-C-A | ** | ||||||
| hg19:Y:13904438-T-A hg38:Y:11783732-T-A | ** | ||||||
| hg19:Y:13946148-C-A hg38:Y:11825442-C-A | FT80779 | ** | |||||
| hg19:Y:13961787-C-A hg38:Y:11841081-C-A | ** | ||||||
| hg19:Y:14023129-C-A hg38:Y:11902423-C-A | ** | ||||||
| hg19:Y:14031974-G-A hg38:Y:11911268-G-A | FT146315 | ** | |||||
| hg19:Y:14031975-C-T hg38:Y:11911269-C-T | FT251555 | ** | |||||
| hg19:Y:14031984-T-TTA hg38:Y:11911278-T-TTA | ** | ||||||
| hg19:Y:14062042-AAAT-A hg38:Y:11941336-AAAT-A | ** | ||||||
| hg19:Y:14106934-T-G hg38:Y:11986228-T-G | ** | ||||||
| hg19:Y:14233254-C-A hg38:Y:12112548-C-A | ** | ||||||
| hg19:Y:14233260-T-A hg38:Y:12112554-T-A | ** | ||||||
| hg19:Y:14301878-A-C hg38:Y:12181172-A-C | ** | ||||||
| hg19:Y:14316186-C-A hg38:Y:12195480-C-A | 14×T | ** | |||||
| hg19:Y:14358318-T-A hg38:Y:12237613-T-A | ** | ||||||
| hg19:Y:14425630-G-T hg38:Y:12304905-G-T | ** | ||||||
| hg19:Y:14430412-C-A hg38:Y:12309685-C-A | ** | ||||||
| hg19:Y:14458403-A-G hg38:Y:12337676-A-G | ** | ||||||
| hg19:Y:14458406-T-C hg38:Y:12337679-T-C | ** | ||||||
| hg19:Y:14462835-C-A hg38:Y:12342108-C-A | ** | ||||||
| hg19:Y:14518557-G-T hg38:Y:12406758-G-T | ** | ||||||
| hg19:Y:14562364-G-A hg38:Y:12450564-G-A | ** | ||||||
| hg19:Y:14562371-G-A hg38:Y:12450571-G-A | ** | ||||||
| hg19:Y:14639163-C-A hg38:Y:12527232-C-A | ** | ||||||
| hg19:Y:14724644-T-G hg38:Y:12612712-T-G | ** | ||||||
| hg19:Y:14724658-T-G hg38:Y:12612726-T-G | ** | ||||||
| hg19:Y:14778816-C-A hg38:Y:12666886-C-A | ** | ||||||
| hg19:Y:14786675-A-C hg38:Y:12674745-A-C | ** | ||||||
| hg19:Y:14798623-G-A hg38:Y:12686694-G-A | ** | ||||||
| hg19:Y:14798627-T-C hg38:Y:12686698-T-C | ** | ||||||
| hg19:Y:14798641-T-C hg38:Y:12686712-T-C | ** | ||||||
| hg19:Y:14803140-C-A hg38:Y:12691211-C-A | ** | ||||||
| hg19:Y:14849077-T-A hg38:Y:12737143-T-A | ** | ||||||
| hg19:Y:15047730-T-G hg38:Y:12935821-T-G | ** | ||||||
| hg19:Y:15056850-C-A hg38:Y:12944942-C-A | ** | ||||||
| hg19:Y:15116711-G-T hg38:Y:13004798-G-T | ** | ||||||
| hg19:Y:15132055-A-C hg38:Y:13020142-A-C | ** | ||||||
| hg19:Y:15151524-AAG-A hg38:Y:13039611-AAG-A | ** | ||||||
| hg19:Y:15183705-G-T hg38:Y:13071791-G-T | ** | ||||||
| hg19:Y:15189839-C-A hg38:Y:13077925-C-A | ** | ||||||
| hg19:Y:15221445-C-A hg38:Y:13109531-C-A | ** | ||||||
| hg19:Y:15323491-C-A hg38:Y:13211609-C-A | ** | ||||||
| hg19:Y:15358621-C-A hg38:Y:13246740-C-A | ** | ||||||
| hg19:Y:15391361-C-A hg38:Y:13279481-C-A | ** | ||||||
| hg19:Y:15397316-A-T hg38:Y:13285436-A-T | ** | ||||||
| hg19:Y:15406829-A-G hg38:Y:13294949-A-G | ** | ||||||
| hg19:Y:15406837-G-A hg38:Y:13294957-G-A | FT372167 | ** | |||||
| hg19:Y:15406841-G-A hg38:Y:13294961-G-A | ** | ||||||
| hg19:Y:15406843-G-A hg38:Y:13294963-G-A | ** | ||||||
| hg19:Y:15406847-G-A hg38:Y:13294967-G-A | ** | ||||||
| hg19:Y:15406858-T-G hg38:Y:13294978-T-G | ** | ||||||
| hg19:Y:15449810-C-A hg38:Y:13337930-C-A | ** | ||||||
| hg19:Y:15478763-C-A hg38:Y:13366883-C-A | ** | ||||||
| hg19:Y:15513670-T-C hg38:Y:13401790-T-C | ** | ||||||
| hg19:Y:15513671-G-A hg38:Y:13401791-G-A | ** | ||||||
| hg19:Y:15513672-T-C hg38:Y:13401792-T-C | ** | ||||||
| hg19:Y:15513684-A-G hg38:Y:13401804-A-G | ** | ||||||
| hg19:Y:15690773-C-A hg38:Y:13578893-C-A | ** | ||||||
| hg19:Y:15740806-C-A hg38:Y:13628926-C-A | ** | ||||||
| hg19:Y:15843124-C-A hg38:Y:13731244-C-A | ** | ||||||
| hg19:Y:15964642-C-CTT hg38:Y:13852762-C-CTT | 14×T | ** | |||||
| hg19:Y:15971300-C-A hg38:Y:13859420-C-A | ** | ||||||
| hg19:Y:15995387-C-A hg38:Y:13883507-C-A | ** | ||||||
| hg19:Y:16007871-T-G hg38:Y:13895991-T-G | ** | ||||||
| hg19:Y:16070120-C-A hg38:Y:13958240-C-A | ** | ||||||
| hg19:Y:16093928-A-T hg38:Y:13982048-A-T | ** | ||||||
| hg19:Y:16214578-G-T hg38:Y:14102698-G-T | ** | ||||||
| hg19:Y:16258977-C-A hg38:Y:14147097-C-A | ** | ||||||
| hg19:Y:16259182-C-A hg38:Y:14147302-C-A | ** | ||||||
| hg19:Y:16277867-A-C hg38:Y:14165987-A-C | ** | ||||||
| hg19:Y:16344361-T-G hg38:Y:14232481-T-G | ** | ||||||
| hg19:Y:16344612-C-T hg38:Y:14232732-C-T | ** | ||||||
| hg19:Y:16344621-C-T hg38:Y:14232741-C-T | ** | ||||||
| hg19:Y:16344628-C-G hg38:Y:14232748-C-G | ** | ||||||
| hg19:Y:16344633-T-A hg38:Y:14232753-T-A | ** | ||||||
| hg19:Y:16344635-G-T hg38:Y:14232755-G-T | ** | ||||||
| hg19:Y:16352097-T-G hg38:Y:14240217-T-G | ** | ||||||
| hg19:Y:16445624-A-T hg38:Y:14333744-A-T | ** | ||||||
| hg19:Y:16445864-C-A hg38:Y:14333984-C-A | ** | ||||||
| hg19:Y:16550983-C-A hg38:Y:14439103-C-A | ** | ||||||
| hg19:Y:16602902-T-C hg38:Y:14491022-T-C | ** | ||||||
| hg19:Y:16623129-G-T hg38:Y:14511249-G-T | ** | ||||||
| hg19:Y:16642176-C-A hg38:Y:14530296-C-A | ** | ||||||
| hg19:Y:16667917-C-A hg38:Y:14556037-C-A | ** | ||||||
| hg19:Y:16681575-C-T hg38:Y:14569695-C-T | ** | ||||||
| hg19:Y:16849523-C-A hg38:Y:14737643-C-A | ** | ||||||
| hg19:Y:16932058-C-A hg38:Y:14820178-C-A | ** | ||||||
| hg19:Y:16947403-G-C hg38:Y:14835523-G-C | ** | ||||||
| hg19:Y:17187558-C-A hg38:Y:15075678-C-A | ** | ||||||
| hg19:Y:17226900-A-G hg38:Y:15115020-A-G | ** | ||||||
| hg19:Y:17231526-T-G hg38:Y:15119646-T-G | ** | ||||||
| hg19:Y:17279414-AT-A hg38:Y:15167534-AT-A | ** | ||||||
| hg19:Y:17283234-C-A hg38:Y:15171354-C-A | ** | ||||||
| hg19:Y:17306324-C-A hg38:Y:15194444-C-A | ** | ||||||
| hg19:Y:17346422-A-C hg38:Y:15234542-A-C | ** | ||||||
| hg19:Y:17355909-C-A hg38:Y:15244029-C-A | ** | ||||||
| hg19:Y:17382637-G-C hg38:Y:15270757-G-C | ** | ||||||
| hg19:Y:17449193-T-A hg38:Y:15337313-T-A | ** | ||||||
| hg19:Y:17494596-C-A hg38:Y:15382716-C-A | ** | ||||||
| hg19:Y:17503972-T-C hg38:Y:15392092-T-C | ** | ||||||
| hg19:Y:17547528-A-C hg38:Y:15435648-A-C | ** | ||||||
| hg19:Y:17592775-C-A hg38:Y:15480895-C-A | ** | ||||||
| hg19:Y:17650309-C-A hg38:Y:15538429-C-A | ** | ||||||
| hg19:Y:17718431-T-G hg38:Y:15606551-T-G | ** | ||||||
| hg19:Y:17853557-G-A hg38:Y:15741677-G-A | ** | ||||||
| hg19:Y:17859937-A-G hg38:Y:15748057-A-G | ** | ||||||
| hg19:Y:17859944-T-A hg38:Y:15748064-T-A | ** | ||||||
| hg19:Y:17876230-A-T hg38:Y:15764350-A-T | ** | ||||||
| hg19:Y:17885083-T-G hg38:Y:15773203-T-G | ** | ||||||
| hg19:Y:17885086-T-A hg38:Y:15773206-T-A | ** | ||||||
| hg19:Y:17885094-T-A hg38:Y:15773214-T-A | ** | ||||||
| hg19:Y:17897899-T-C hg38:Y:15786019-T-C | ** | ||||||
| hg19:Y:17927976-C-A hg38:Y:15816096-C-A | ** | ||||||
| hg19:Y:17946913-TTG-T hg38:Y:15835033-TTG-T | ** | ||||||
| hg19:Y:18195212-C-A hg38:Y:16083332-C-A | ** | ||||||
| hg19:Y:18244019-C-A hg38:Y:16132139-C-A | FT139808 | ** | |||||
| hg19:Y:18263266-G-T hg38:Y:16151386-G-T | ** | ||||||
| hg19:Y:18366127-G-T hg38:Y:16254247-G-T | P6_Prx | ** | |||||
| hg19:Y:18554268-C-A hg38:Y:16442388-C-A | ** | ||||||
| hg19:Y:18573533-G-T hg38:Y:16461653-G-T | ** | ||||||
| hg19:Y:18596252-C-A hg38:Y:16484372-C-A | ** | ||||||
| hg19:Y:18636063-A-G hg38:Y:16524183-A-G | ** | ||||||
| hg19:Y:18753098-G-C hg38:Y:16641218-G-C | ** | ||||||
| hg19:Y:18756403-C-A hg38:Y:16644523-C-A | ** | ||||||
| hg19:Y:18763714-C-A hg38:Y:16651834-C-A | ** | ||||||
| hg19:Y:18856232-G-T hg38:Y:16744352-G-T | ** | ||||||
| hg19:Y:18857576-T-A hg38:Y:16745696-T-A | ** | ||||||
| hg19:Y:18943014-C-A hg38:Y:16831134-C-A | ** | ||||||
| hg19:Y:18966189-C-A hg38:Y:16854309-C-A | ** | ||||||
| hg19:Y:19052173-T-G hg38:Y:16940293-T-G | ** | ||||||
| hg19:Y:19052263-A-C hg38:Y:16940383-A-C | ** | ||||||
| hg19:Y:19052259-CA-C hg38:Y:16940379-CA-C | ** | ||||||
| hg19:Y:19052271-C-T hg38:Y:16940391-C-T | FGC58065 | ** | |||||
| hg19:Y:19052275-C-T hg38:Y:16940395-C-T | FTA55920 | ** | |||||
| hg19:Y:19052276-A-G hg38:Y:16940396-A-G | ** | ||||||
| hg19:Y:19052278-G-A hg38:Y:16940398-G-A | ** | ||||||
| hg19:Y:19200875-C-A hg38:Y:17088995-C-A | ** | ||||||
| hg19:Y:19228915-C-A hg38:Y:17117035-C-A | ** | ||||||
| hg19:Y:19418335-A-C hg38:Y:17306455-A-C | ** | ||||||
| hg19:Y:19439655-G-A hg38:Y:17327775-G-A | ** | ||||||
| hg19:Y:19515096-C-G hg38:Y:17403216-C-G | ** | ||||||
| hg19:Y:19537997-A-C hg38:Y:17426117-A-C | ** | ||||||
| hg19:Y:19758759-A-C hg38:Y:17646879-A-C | P5_Prx | ** | |||||
| hg19:Y:19758796-A-T hg38:Y:17646916-A-T | P5_Prx | ** | |||||
| hg19:Y:19863855-T-A hg38:Y:17751975-T-A | P5_Prx | ** | |||||
| hg19:Y:19863873-G-C hg38:Y:17751993-G-C | P5_Prx | ** | |||||
| hg19:Y:19863879-T-A hg38:Y:17751999-T-A | P5_Prx | ** | |||||
| hg19:Y:19863889-T-A hg38:Y:17752009-T-A | P5_Prx | ** | |||||
| hg19:Y:19863894-T-A hg38:Y:17752014-T-A | P5_Prx | ** | |||||
| hg19:Y:19863903-T-A hg38:Y:17752023-T-A | P5_Prx | ** | |||||
| hg19:Y:20817655-T-C hg38:Y:18655769-T-C | P4_Gap | ** | |||||
| hg19:Y:20840218-A-C hg38:Y:18678332-A-C | P4_Gap | ** | |||||
| hg19:Y:21082069-C-A hg38:Y:18920183-C-A | ** | ||||||
| hg19:Y:21096155-C-A hg38:Y:18934269-C-A | ** | ||||||
| hg19:Y:21106027-G-T hg38:Y:18944141-G-T | ** | ||||||
| hg19:Y:21133428-A-C hg38:Y:18971542-A-C | ** | ||||||
| hg19:Y:21154551-C-A hg38:Y:18992665-C-A | ** | ||||||
| hg19:Y:21162965-A-C hg38:Y:19001079-A-C | ** | ||||||
| hg19:Y:21304956-C-A hg38:Y:19143070-C-A | ** | ||||||
| hg19:Y:21320026-A-C hg38:Y:19158140-A-C | ** | ||||||
| hg19:Y:21362001-A-G hg38:Y:19200115-A-G | ** | ||||||
| hg19:Y:21373776-C-A hg38:Y:19211890-C-A | ** | ||||||
| hg19:Y:21405832-C-A hg38:Y:19243946-C-A | 15×A | ** | |||||
| hg19:Y:21427717-G-T hg38:Y:19265831-G-T | ** | ||||||
| hg19:Y:21542011-C-A hg38:Y:19380125-C-A | ** | ||||||
| hg19:Y:21544897-T-A hg38:Y:19383011-T-A | ** | ||||||
| hg19:Y:21672001-A-G hg38:Y:19510115-A-G | ** | ||||||
| hg19:Y:21677636-C-A hg38:Y:19515750-C-A | ** | ||||||
| hg19:Y:21821501-C-A hg38:Y:19659615-C-A | ** | ||||||
| hg19:Y:21827605-G-T hg38:Y:19665719-G-T | ** | ||||||
| hg19:Y:21846448-C-A hg38:Y:19684562-C-A | ** | ||||||
| hg19:Y:21852545-A-T hg38:Y:19690659-A-T | ** | ||||||
| hg19:Y:21923958-T-A hg38:Y:19762072-T-A | ** | ||||||
| hg19:Y:21950663-T-A hg38:Y:19788777-T-A | ** | ||||||
| hg19:Y:22027773-C-A hg38:Y:19865887-C-A | ** | ||||||
| hg19:Y:22028862-C-A hg38:Y:19866976-C-A | ** | ||||||
| hg19:Y:22048616-C-A hg38:Y:19886730-C-A | ** | ||||||
| hg19:Y:22069742-C-A hg38:Y:19907856-C-A | ** | ||||||
| hg19:Y:22084742-C-A hg38:Y:19922856-C-A | ** | ||||||
| hg19:Y:22200519-C-A hg38:Y:20038633-C-A | ** | ||||||
| hg19:Y:22211540-C-A hg38:Y:20049654-C-A | ** | ||||||
| hg19:Y:22427754-T-A hg38:Y:20265868-T-A | DYZ19 | ** | |||||
| hg19:Y:22602001-A-G hg38:Y:20440115-A-G | ** | ||||||
| hg19:Y:22651488-C-A hg38:Y:20489602-C-A | ** | ||||||
| hg19:Y:22811928-C-A hg38:Y:20650042-C-A | ** | ||||||
| hg19:Y:22864914-A-C hg38:Y:20703028-A-C | ** | ||||||
| hg19:Y:22963671-T-A hg38:Y:20801785-T-A | ** | ||||||
| hg19:Y:23041289-T-C hg38:Y:20879403-T-C | ** | ||||||
| hg19:Y:23047747-C-A hg38:Y:20885861-C-A | ** | ||||||
| hg19:Y:23186539-C-A hg38:Y:21024653-C-A | ** | ||||||
| hg19:Y:23225434-C-T hg38:Y:21063548-C-T | ** | ||||||
| hg19:Y:23317649-CT-C hg38:Y:21155763-CT-C | 37×T | ** | |||||
| hg19:Y:23386455-C-A hg38:Y:21224569-C-A | ** | ||||||
| hg19:Y:23425183-A-T hg38:Y:21263297-A-T | ** | ||||||
| hg19:Y:23475519-G-T hg38:Y:21313633-G-T | ** | ||||||
| hg19:Y:23564740-C-A hg38:Y:21402854-C-A | ** | ||||||
| hg19:Y:23564743-G-T hg38:Y:21402857-G-T | ** | ||||||
| hg19:Y:23564749-T-A hg38:Y:21402863-T-A | ** | ||||||
| hg19:Y:23564753-C-A hg38:Y:21402867-C-A | ** | ||||||
| hg19:Y:23564762-C-A hg38:Y:21402876-C-A | ** | ||||||
| hg19:Y:23564763-C-A hg38:Y:21402877-C-A | ** | ||||||
| hg19:Y:23564826-T-A hg38:Y:21402940-T-A | ** | ||||||
| hg19:Y:24381427-T-TA hg38:Y:22235280-T-TA | ** | ||||||
| hg19:Y:24474920-T-G hg38:Y:22328773-T-G | ** | ||||||
| hg19:Y:24485765-T-G hg38:Y:22339618-T-G | ** | ||||||
| hg19:Y:24504983-T-C hg38:Y:22358836-T-C | ** | ||||||
| hg19:Y:26081050-A-T hg38:Y:23934903-A-T | P1_Y1 | ** | |||||
| hg19:Y:26228691-T-TTC hg38:Y:24082544-T-TTC | P1_Y1 | ** | |||||
| hg19:Y:26376543-G-T hg38:Y:24230396-G-T | P1_Y1 | ** | |||||
| hg19:Y:26740575-C-A hg38:Y:24594428-C-A | P1_g2 | ** | |||||
| hg19:Y:26740586-T-A hg38:Y:24594439-T-A | P1_g2 | ** | |||||
| hg19:Y:26740589-C-A hg38:Y:24594442-C-A | P1_g2 | ** | |||||
| hg19:Y:26740595-T-A hg38:Y:24594448-T-A | P1_g2 | ** | |||||
| hg19:Y:27757816-C-A hg38:Y:25611669-C-A | P1_Y2 | ** | |||||
| hg19:Y:27883497-C-A hg38:Y:25737350-C-A | P1_Y2 | ** | |||||
| hg19:Y:27916304-T-G hg38:Y:25770157-T-G | P1_Y2 | ** | |||||
| hg19:Y:28461560-C-A hg38:Y:26315413-C-A | ** | ||||||
| hg19:Y:28510413-T-G hg38:Y:26364266-T-G | ** | ||||||
| hg19:Y:28510437-T-A hg38:Y:26364290-T-A | ** | ||||||
| hg19:Y:28532139-G-A hg38:Y:26385992-G-A | ** | ||||||
| hg19:Y:28547544-T-G hg38:Y:26401397-T-G | ** | ||||||
| hg19:Y:28712028-C-A hg38:Y:26565881-C-A | ** | ||||||
| hg19:Y:28714912-A-T hg38:Y:26568765-A-T | ** | ||||||
| hg19:Y:28724398-G-A hg38:Y:26578251-G-A | ** | ||||||
| hg19:Y:28724399-A-G hg38:Y:26578252-A-G | ** | ||||||
| hg19:Y:28794183-G-T hg38:Y:26648036-G-T | ** | ||||||
| hg19:Y:28794240-G-C hg38:Y:26648093-G-C | ** | ||||||
| hg19:Y:28794261-T-A hg38:Y:26648114-T-A | ** | ||||||
| hg19:Y:28808552-G-T hg38:Y:26662405-G-T | ** | ||||||
| hg19:Y:28808558-C-A hg38:Y:26662411-C-A | ** | ||||||
| hg38:Y:56826478-ATTTCC-A | ** | ||||||
| hg38:Y:56827493-G-T | ** | ||||||
| hg38:Y:56840795-C-A | ** | ||||||
| hg38:Y:56842430-C-T | ** | ||||||
| hg38:Y:56849089-C-T | ** | ||||||
| hg38:Y:56869959-T-TAA | ** | ||||||
| hg38:Y:56869966-C-CTTG | ** | ||||||
| hg38:Y:56869968-GTT-G | ** | ||||||
| hg19:Y:18837739-AT-A hg38:Y:16725859-AT-A | 10×T | *** | |||||
| hg19:Y:16588668-TA-T hg38:Y:14476788-TA-T | A7983 | 10×A | *** | ||||
| hg19:Y:21494668-ACTCT-A hg38:Y:19332782-ACTCT-A | 9×CT | *** | |||||
| hg19:Y:2808509-C-A hg38:Y:2940468-C-A | *** | ||||||
| hg19:Y:2864225-C-A hg38:Y:2996184-C-A | *** | ||||||
| hg19:Y:2912627-C-CT hg38:Y:3044586-C-CT | 8×T | *** | |||||
| hg19:Y:5126051-C-A hg38:Y:5258010-C-A | *** | ||||||
| hg19:Y:6426692-GA-G hg38:Y:6558651-GA-G | 9×A | *** | |||||
| hg19:Y:6719441-TA-T,TAA hg38:Y:6851400-TA-T,TAA | 14×A | *** | |||||
| hg19:Y:7075952-C-A hg38:Y:7207911-C-A | *** | ||||||
| hg19:Y:8045542-C-A hg38:Y:8177501-C-A | *** | ||||||
| hg19:Y:8267186-C-A hg38:Y:8399145-C-A | F16838 | *** | |||||
| hg19:Y:8800955-C-A hg38:Y:8932914-C-A | *** | ||||||
| hg19:Y:8817412-C-A hg38:Y:8949371-C-A | *** | ||||||
| hg19:Y:9396381-C-A hg38:Y:9558772-C-A | *** | ||||||
| hg19:Y:9465459-T-C hg38:Y:9627850-T-C | *** | ||||||
| hg38:Y:10751060-A-G | *** | ||||||
| hg38:Y:10751074-C-A | *** | ||||||
| hg38:Y:10831367-A-G | *** | ||||||
| hg38:Y:10987768-C-A | *** | ||||||
| hg38:Y:10987783-C-CCAATA | *** | ||||||
| hg38:Y:11001468-C-A | *** | ||||||
| hg19:Y:13447896-CGTTCA-C,CATTCC hg38:Y:11292220-CGTTCA-C,CATTCC | *** | ||||||
| hg19:Y:13691820-AG-A hg38:Y:11536144-AG-A | DYZ17 | *** | |||||
| hg19:Y:13800734-G-A hg38:Y:11680028-G-A | DYZ17 | *** | |||||
| hg19:Y:14252082-T-C hg38:Y:12131376-T-C | *** | ||||||
| hg19:Y:14367644-C-A hg38:Y:12246940-C-A | *** | ||||||
| hg19:Y:14413790-C-A hg38:Y:12293087-C-A | *** | ||||||
| hg19:Y:14685995-C-A hg38:Y:12574061-C-A | *** | ||||||
| hg19:Y:14841893-ATT-A hg38:Y:12729960-ATT-A | 11×T | *** | |||||
| hg19:Y:14848815-C-A hg38:Y:12736881-C-A | *** | ||||||
| hg19:Y:14857829-C-A hg38:Y:12745895-C-A | *** | ||||||
| hg19:Y:15175704-GA-G hg38:Y:13063790-GA-G | 9×A | *** | |||||
| hg19:Y:15380192-G-A hg38:Y:13268312-G-A | FT260748 | *** | |||||
| hg19:Y:15585013-C-A hg38:Y:13473133-C-A | *** | ||||||
| hg19:Y:15746736-C-A hg38:Y:13634856-C-A | *** | ||||||
| hg19:Y:15984512-C-A hg38:Y:13872632-C-A | *** | ||||||
| hg19:Y:16269247-C-A hg38:Y:14157367-C-A | *** | ||||||
| hg19:Y:16763390-C-A hg38:Y:14651510-C-A | *** | ||||||
| hg19:Y:16823952-TAAA-T,TA hg38:Y:14712072-TAAA-T,TA | 17×A | *** | |||||
| hg19:Y:16935985-C-A hg38:Y:14824105-C-A | *** | ||||||
| hg19:Y:17079245-C-A hg38:Y:14967365-C-A | *** | ||||||
| hg19:Y:17091640-C-A hg38:Y:14979760-C-A | *** | ||||||
| hg19:Y:17111393-C-A hg38:Y:14999513-C-A | *** | ||||||
| hg19:Y:17195121-C-A hg38:Y:15083241-C-A | FTA19311 | *** | |||||
| hg19:Y:17285033-T-C hg38:Y:15173153-T-C | *** | ||||||
| hg19:Y:17337000-C-A hg38:Y:15225120-C-A | *** | ||||||
| hg19:Y:17816054-C-A hg38:Y:15704174-C-A | *** | ||||||
| hg19:Y:17944113-C-A hg38:Y:15832233-C-A | *** | ||||||
| hg19:Y:17961204-C-A hg38:Y:15849324-C-A | *** | ||||||
| hg19:Y:18593990-C-A hg38:Y:16482110-C-A | FT243639 | *** | |||||
| hg19:Y:18648739-C-T hg38:Y:16536859-C-T | *** | ||||||
| hg19:Y:18673869-C-A hg38:Y:16561989-C-A | *** | ||||||
| hg19:Y:18698728-T-C hg38:Y:16586848-T-C | *** | ||||||
| hg19:Y:19298976-C-A hg38:Y:17187096-C-A | *** | ||||||
| hg19:Y:20534762-C-A hg38:Y:18372876-C-A | P5_Dst | *** | |||||
| hg19:Y:21166719-C-A hg38:Y:19004833-C-A | *** | ||||||
| hg19:Y:21400010-A-G hg38:Y:19238124-A-G | *** | ||||||
| hg19:Y:21715204-C-A hg38:Y:19553318-C-A | BY162960 | *** | |||||
| hg19:Y:21952151-C-A hg38:Y:19790265-C-A | *** | ||||||
| hg19:Y:22018821-C-A hg38:Y:19856935-C-A | *** | ||||||
| hg19:Y:22023201-CTTTT-C,CTTT hg38:Y:19861315-CTTTT-C,CTTT | 20×T | *** | |||||
| hg19:Y:22237697-G-A hg38:Y:20075811-G-A | DYZ19 | *** | |||||
| hg19:Y:22518577-C-A hg38:Y:20356691-C-A | *** | ||||||
| hg19:Y:22747089-A-G hg38:Y:20585203-A-G | *** | ||||||
| hg19:Y:22858066-G-A hg38:Y:20696180-G-A | *** | ||||||
| hg19:Y:23020305-C-A hg38:Y:20858419-C-A | *** | ||||||
| hg19:Y:23355263-C-A hg38:Y:21193377-C-A | *** | ||||||
| hg19:Y:23447115-C-A hg38:Y:21285229-C-A | *** | ||||||
| hg19:Y:24365935-C-A hg38:Y:22219788-C-A | *** | ||||||
| hg19:Y:24890776-C-A hg38:Y:22744629-C-A | g1 | *** | |||||
| hg19:Y:28462456-G-T hg38:Y:26316309-G-T | *** | ||||||
| hg38:Y:56832153-CGTTCT-C,CATTCT | *** | ||||||
| hg38:Y:56842408-T-C | *** | ||||||
| hg38:Y:56842411-G-A | *** | ||||||
| hg38:Y:56842431-TG-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 41405 | 9023222 | 7411348 | 7339667 |
| Used in age calculations | 9023222 | 7411348 | 7339667 |
| Counts of SNPs | 1 | 1 |
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