Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > S764 > ZZ28 > FGC18441 > FGC18447 > FGC18453 > FGC18451 > FGC18442

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRFGC
6MVR8
hg19:Y:3563516-C-G hg38:Y:3695475-C-G FGC18443 +
hg19:Y:5910637-A-G hg38:Y:6042596-A-G FGC18445 +
hg19:Y:6645913-C-G hg38:Y:6777872-C-G FGC18446 Y+
hg19:Y:13216943-T-A hg38:Y:11061267-T-A FGC18449 +
hg19:Y:17072822-A-G hg38:Y:14960942-A-G FGC18450 YY+
hg19:Y:22200870-G-A hg38:Y:20038984-G-A FGC18452 YY+
hg19:Y:17355460-C-CA hg38:Y:15243580-C-CA FGC18454 +
hg19:Y:24895661-G-A hg38:Y:22749514-G-A g1 10×A**
hg19:Y:17304689-C-CAGATAGAT hg38:Y:15192809-C-CAGATAGAT 11×AGAT**
hg19:Y:13470254-C-T hg38:Y:11314578-C-T **
hg19:Y:22353012-G-A hg38:Y:20191126-G-A DYZ19 **
hg19:Y:9939130-A-G hg38:Y:10101521-A-G **
hg19:Y:58845839-CATTCGAGTCCATTCG-C hg38:Y:56745015-TTCGAATGGACTCGAA-T **
hg19:Y:22266350-A-T hg38:Y:20104464-A-T DYZ19 **
hg19:Y:22353019-G-T hg38:Y:20191133-G-T DYZ19 **
hg19:Y:22353020-T-C hg38:Y:20191134-T-C DYZ19 **
hg19:Y:22337314-G-C hg38:Y:20175428-G-C DYZ19 **
hg19:Y:22252915-T-G hg38:Y:20091029-T-G DYZ19 **
hg19:Y:58846432-TTCCATTCCATTCAAA-T hg38:Y:56744414-CTGGAATGGATTTGAA-C **
hg19:Y:10025156-C-T hg38:Y:10187547-C-T **
hg19:Y:18297876-C-CTTTTTTT hg38:Y:16185996-C-CTTTTTTT P6_Prx 31×T**
hg19:Y:20569614-C-CAAAAAAAAAAA hg38:Y:18407728-C-CAAAAAAAAAAA P5_Dst 33×A**
hg19:Y:9939336-A-G hg38:Y:10101727-A-G **
hg19:Y:13423160-A-T hg38:Y:11267484-A-T **
hg19:Y:13423188-T-A hg38:Y:11267512-T-A **
hg19:Y:5652187-A-T hg38:Y:5784146-A-T **
hg19:Y:14565557-G-T hg38:Y:12453757-G-T **
hg19:Y:23505495-C-CAAAA hg38:Y:21343609-C-CAAAA 23×A**
hg19:Y:8462064-C-CAAAA hg38:Y:8594023-C-CAAAA 26×A**
hg19:Y:9429667-C-CAAAAAAAA hg38:Y:9592058-C-CAAAAAAAA 25×A**
hg19:Y:13205595-AATAT-A hg38:Y:11049919-AATAT-A 9×AT**
hg19:Y:14088008-CT-C hg38:Y:11967302-CT-C **
hg19:Y:19183814-C-CTTTT hg38:Y:17071934-C-CTTTT 28×T**
hg19:Y:13459711-G-A hg38:Y:11304035-G-A BY47618 ***
hg19:Y:13143720-TATTCCATTCC-T hg38:Y:10633206-TATTCCATTCC-T 11×ATTCC***
hg19:Y:25709386-G-GTTTTT hg38:Y:23563239-G-GTTTTT P1_b3 31×T***
hg19:Y:10025176-G-A hg38:Y:10187567-G-A ***
hg19:Y:13708525-C-G hg38:Y:11552849-C-G DYZ17 ***
hg19:Y:10025140-C-T hg38:Y:10187531-C-T ***
hg19:Y:58967654-N-A hg38:Y:56821507-N-A ***
hg19:Y:13485153-T-A hg38:Y:11329477-T-A ***
hg19:Y:22341741-C-G hg38:Y:20179855-C-G DYZ19 ***
hg19:Y:22256961-T-C hg38:Y:20095075-T-C DYZ19 ***
hg19:Y:22421962-T-G hg38:Y:20260076-T-G DYZ19 ***
hg19:Y:13129546-C-T hg38:Y:10619032-C-T ***
hg19:Y:13374277-G-C hg38:Y:11218601-G-C 13×A***
hg19:Y:22248495-G-A hg38:Y:20086609-G-A DYZ19 ***
hg19:Y:22263807-G-T hg38:Y:20101921-G-T BY43709 DYZ19 ***
hg19:Y:22358856-G-A hg38:Y:20196970-G-A DYZ19 ***
hg19:Y:22360260-G-T hg38:Y:20198374-G-T DYZ19 ***
hg19:Y:22361213-A-C hg38:Y:20199327-A-C DYZ19 ***
hg19:Y:22504754-A-G hg38:Y:20342868-A-G DYZ19 ***
hg19:Y:58831242-A-C hg38:Y:56759629-T-G ***
hg19:Y:58843573-T-G hg38:Y:56747298-A-C ***
hg19:Y:58843794-T-C hg38:Y:56747077-A-G ***
hg19:Y:58874506-A-C hg38:Y:56716365-T-G ***
hg19:Y:58885451-C-T hg38:Y:56705420-G-A ***
hg19:Y:13203965-GA-G hg38:Y:11048289-GA-G ***
hg19:Y:9732895-C-CAAAAAA hg38:Y:9895286-C-CAAAAAA IR3_Prx 20×A***
hg19:Y:13203955-CATCATT-GACAATA hg38:Y:11048279-CATCATT-GACAATA ***
hg19:Y:13488988-AGGGT-GGGGC hg38:Y:11333312-AGGGT-GGGGC ***
hg19:Y:22232040-CAAA-AAAT hg38:Y:20070154-CAAA-AAAT DYZ19 ***
hg19:Y:22232055-ACAC-GCAT hg38:Y:20070169-ACAC-GCAT DYZ19 ***
hg19:Y:22236464-CCCACCAAGG-ACCAGTAAGT hg38:Y:20074578-CCCACCAAGG-ACCAGTAAGT DYZ19 ***
hg19:Y:22266350-ATGT-TTGC hg38:Y:20104464-ATGT-TTGC DYZ19 ***
hg19:Y:22337234-GG-AA hg38:Y:20175348-GG-AA DYZ19 ***
hg19:Y:22337437-ACTTA-CCTTG hg38:Y:20175551-ACTTA-CCTTG DYZ19 ***
hg19:Y:22358798-TTTCG-GTTCC hg38:Y:20196912-TTTCG-GTTCC DYZ19 ***
hg19:Y:22361311-GGCTC-TGCTA hg38:Y:20199425-GGCTC-TGCTA DYZ19 ***
hg19:Y:22364716-TTTG-ATTT hg38:Y:20202830-TTTG-ATTT DYZ19 ***
hg19:Y:22457231-CT-C hg38:Y:20295345-CT-C DYZ19 ***
hg19:Y:22495772-A-AC hg38:Y:20333886-A-AC DYZ19 ***
hg19:Y:28794961-CGC-GGG hg38:Y:26648814-CGC-GGG ***
hg19:Y:58885483-AGTC-TGTG hg38:Y:56705385-GACT-CACA ***
hg19:Y:58909135-A-G hg38:Y:56681736-T-C ***
hg19:Y:22268380-T-A hg38:Y:20106494-T-A DYZ19 ***
hg19:Y:13465768-C-A hg38:Y:11310092-C-A F18170 ***
hg19:Y:22256954-G-C hg38:Y:20095068-G-C DYZ19 ***
hg19:Y:10090723-T-C hg38:Y:10253114-T-C ***
hg19:Y:13129514-T-A hg38:Y:10619000-T-A ***
hg19:Y:13129531-T-G hg38:Y:10619017-T-G ***
hg19:Y:22248366-A-C hg38:Y:20086480-A-C DYZ19 ***
hg19:Y:22250305-G-T hg38:Y:20088419-G-T DYZ19 ***
hg19:Y:22337437-A-C hg38:Y:20175551-A-C DYZ19 ***
hg19:Y:22337441-A-G hg38:Y:20175555-A-G DYZ19 ***
hg19:Y:22360043-T-G hg38:Y:20198157-T-G DYZ19 ***
hg19:Y:22366032-G-A hg38:Y:20204146-G-A DYZ19 ***
hg19:Y:22366040-T-C hg38:Y:20204154-T-C DYZ19 ***
hg19:Y:22366930-A-T hg38:Y:20205044-A-T DYZ19 ***
hg19:Y:22435772-C-T hg38:Y:20273886-C-T DYZ19 ***
hg19:Y:22496026-C-A hg38:Y:20334140-C-A DYZ19 ***
hg19:Y:58841100-T-C hg38:Y:56749771-A-G ***
hg19:Y:58908630-A-C hg38:Y:56682241-T-G ***
hg19:Y:58908683-G-T hg38:Y:56682188-C-A ***
hg19:Y:22248332-TAC-AGT hg38:Y:20086446-TAC-AGT DYZ19 ***
hg19:Y:22248350-A-AC hg38:Y:20086464-A-AC DYZ19 ***
hg19:Y:22248354-AT-CA hg38:Y:20086468-AT-CA DYZ19 ***
hg19:Y:22341149-CTTCT-GCTCA hg38:Y:20179263-CTTCT-GCTCA DYZ19 ***
hg19:Y:22422023-ATGTC-TTGGT hg38:Y:20260137-ATGTC-TTGGT DYZ19 ***
hg19:Y:22435753-AGT-TAC hg38:Y:20273867-AGT-TAC DYZ19 ***
hg19:Y:58894963-TACATTTGATGCCATC-T hg38:Y:56695892-GGATGGCATCAAATGT-G ***
hg19:Y:13467511-A-C hg38:Y:11311835-A-C ***
hg19:Y:22289623-C-A hg38:Y:20127737-C-A DYZ19 ***
hg19:Y:13721624-G-T hg38:Y:11565948-G-T DYZ17 ***
hg19:Y:13721630-G-A hg38:Y:11565954-G-A DYZ17 ***
hg19:Y:20540889-A-T hg38:Y:18379003-A-T P5_Dst ***
hg19:Y:20540937-C-T hg38:Y:18379051-C-T P5_Dst ***
hg19:Y:20540945-T-C hg38:Y:18379059-T-C P5_Dst ***
hg19:Y:20540960-G-A hg38:Y:18379074-G-A P5_Dst ***
hg19:Y:22226515-A-G hg38:Y:20064629-A-G S3070 DYZ19 ***
hg19:Y:22292044-A-T hg38:Y:20130158-A-T DYZ19 ***
hg19:Y:22342639-T-A hg38:Y:20180753-T-A DYZ19 ***
hg19:Y:22342676-C-T hg38:Y:20180790-C-T DYZ19 ***
hg19:Y:22342722-C-T hg38:Y:20180836-C-T DYZ19 ***
hg19:Y:22359867-T-G hg38:Y:20197981-T-G DYZ19 ***
hg19:Y:22501967-G-T hg38:Y:20340081-G-T DYZ19 ***
hg19:Y:58838996-C-A hg38:Y:56751875-G-T ***
hg19:Y:58870539-A-T hg38:Y:56720332-T-A ***
hg19:Y:58890263-A-T hg38:Y:56700608-T-A ***
hg19:Y:21965774-CA-C hg38:Y:19803888-CA-C 19×A***
hg19:Y:13467498-T-TC hg38:Y:11311822-T-TC ***
hg19:Y:22252883-ATGA-GTGT hg38:Y:20090997-ATGA-GTGT DYZ19 ***
hg19:Y:22263788-TGTTACAAC-CGTTTCAGT hg38:Y:20101902-TGTTACAAC-CGTTTCAGT DYZ19 ***
hg19:Y:58839001-A-ATTTCT hg38:Y:56751867-C-CAAAGA ***
hg19:Y:10104556-N-A hg38:Y:10266947-N-A ***
hg19:Y:13635966-G-A hg38:Y:11480290-G-A ***
hg19:Y:13930193-G-A hg38:Y:11809487-G-A FTB47640 ***
hg19:Y:13485129-T-A hg38:Y:11329453-T-A ***
hg19:Y:22309303-T-G hg38:Y:20147417-T-G DYZ19 ***
hg19:Y:10090746-C-G hg38:Y:10253137-C-G ***
hg19:Y:22309319-C-G hg38:Y:20147433-C-G DYZ19 ***
hg19:Y:14491216-T-A hg38:Y:12370485-A-. ***
hg19:Y:22252900-C-A hg38:Y:20091014-C-A DYZ19 ***
hg19:Y:22266217-T-C hg38:Y:20104331-T-C DYZ19 ***
hg19:Y:22366433-G-C hg38:Y:20204547-G-C DYZ19 ***
hg19:Y:22366438-G-T hg38:Y:20204552-G-T DYZ19 ***
hg19:Y:22501919-C-T hg38:Y:20340033-C-T DYZ19 ***
hg19:Y:22501937-A-C hg38:Y:20340051-A-C DYZ19 ***
hg19:Y:58831344-C-T hg38:Y:56759527-G-A ***
hg19:Y:58843797-A-T hg38:Y:56747074-T-A ***
hg19:Y:58848719-T-A hg38:Y:56742152-A-T ***
hg19:Y:13467493-GT-G hg38:Y:11311817-GT-G ***
hg19:Y:22235093-G-GC hg38:Y:20073207-G-GC DYZ19 ***
hg19:Y:22282201-GCTGC-ACTGT hg38:Y:20120315-GCTGC-ACTGT DYZ19 ***
hg19:Y:22501927-TTTAG-GTGAT hg38:Y:20340041-TTTAG-GTGAT DYZ19 ***
hg19:Y:26228689-C-CTTTTT hg38:Y:24082542-C-CTTTTT P1_Y1 27×T***
hg19:Y:13485114-T-A hg38:Y:11329438-T-A ***
hg19:Y:22309354-T-C hg38:Y:20147468-T-C DYZ19 ***
hg19:Y:10090703-A-C hg38:Y:10253094-A-C ***
hg19:Y:10090710-A-G hg38:Y:10253101-A-G ***
hg19:Y:22245026-T-C hg38:Y:20083140-T-C DYZ19 ***
hg19:Y:22426403-G-T hg38:Y:20264517-G-T DYZ19 ***
hg19:Y:22426426-G-C hg38:Y:20264540-G-C DYZ19 ***
hg19:Y:22491425-A-T hg38:Y:20329539-A-T DYZ19 ***
hg19:Y:58840728-C-T hg38:Y:56750143-G-A ***
hg19:Y:5308799-TAGAG-T hg38:Y:5440758-TAGAG-T 19×AG***
hg19:Y:18688521-C-AA hg38:Y:16576641-C-AA ***
hg19:Y:13253210-TTT-C hg38:Y:11097534-TTT-C ***
hg19:Y:58829066-TTCCCTTCCGTTCGAT-A hg38:Y:56761790-ATCGAACGGAAGGGAA-T ***
hg19:Y:13203970-CCACCCCGCCTC-TAAT hg38:Y:11048294-CCACCCCGCCTC-TAAT ***
hg19:Y:13473880-AGGAT-TGGAC hg38:Y:11318204-AGGAT-TGGAC ***
hg19:Y:22495767-GC-A hg38:Y:20333881-GC-A DYZ19 ***
hg19:Y:20544039-G-A hg38:Y:18382153-G-A P5_Dst ***
hg19:Y:20544069-C-T hg38:Y:18382183-C-T P5_Dst ***
hg19:Y:22422023-A-T hg38:Y:20260137-A-T DYZ19 ***
hg19:Y:13701958-CAAAAGGAATT-GAAATATAATA hg38:Y:11546282-CAAAAGGAATT-GAAATATAATA DYZ17 ***
hg19:Y:22256922-TTC-GTG hg38:Y:20095036-TTC-GTG DYZ19 ***
hg19:Y:22256931-GTGG-TTGT hg38:Y:20095045-GTGG-TTGT DYZ19 ***
hg19:Y:22257128-ACTGT-GCTGC hg38:Y:20095242-ACTGT-GCTGC DYZ19 ***
hg19:Y:22263779-G-A hg38:Y:20101893-G-A DYZ19 ***
hg19:Y:10090770-T-A hg38:Y:10253161-T-A ***
hg19:Y:10090772-G-A hg38:Y:10253163-G-A ***
hg19:Y:20466556-C-A hg38:Y:18304670-C-A P5_Dst ***
hg19:Y:22234374-C-T hg38:Y:20072488-C-T DYZ19 ***
hg19:Y:22343552-C-T hg38:Y:20181666-C-T DYZ19 ***
hg19:Y:22360572-C-G hg38:Y:20198686-C-G DYZ19 ***
hg19:Y:22480676-C-G hg38:Y:20318790-C-G DYZ19 ***
hg19:Y:22234333-TAT-AA hg38:Y:20072447-TAT-AA DYZ19 ***
hg19:Y:22234368-TC-GA hg38:Y:20072482-TC-GA DYZ19 ***
hg19:Y:58877098-AG-TC hg38:Y:56713772-CT-GA ***
hg19:Y:13876452-G-A hg38:Y:11755746-G-A ***
hg19:Y:19610124-C-T hg38:Y:17498244-C-T P5_Prx 32×T***
hg19:Y:22245077-G-A hg38:Y:20083191-G-A DYZ19 ***
hg19:Y:22245066-AT-A hg38:Y:20083180-AT-A DYZ19 ***
hg19:Y:22245071-G-ACT hg38:Y:20083185-G-ACT DYZ19 ***
hg19:Y:19740992-C-A hg38:Y:17629112-C-A P5_Prx 24×A***
hg19:Y:22342731-G-C hg38:Y:20180845-G-C DYZ19 ***
hg19:Y:22349435-C-G hg38:Y:20187549-C-G FGC15913 DYZ19 ***
hg19:Y:22355223-C-T hg38:Y:20193337-C-T DYZ19 ***
hg19:Y:22358737-A-T hg38:Y:20196851-A-T DYZ19 ***
hg19:Y:58910219-ATTCCATTCC-A hg38:Y:56680642-TGGAATGGAA-T ***
hg19:Y:59007963-A-ACAAACAAAC hg38:Y:56861816-A-ACAAACAAAC ***
hg19:Y:13485134-C-T hg38:Y:11329458-C-T ***
hg19:Y:22366651-T-G hg38:Y:20204765-T-G DYZ19 ***
hg19:Y:26325360-T-A hg38:Y:24179213-T-A FGC18808 P1_Y1 ***
hg19:Y:58909152-A-G hg38:Y:56681719-T-C ***
hg19:Y:13467585-G-C hg38:Y:11311909-G-C ***
hg19:Y:22226684-A-G hg38:Y:20064798-A-G DYZ19 ***
hg19:Y:22236364-T-C hg38:Y:20074478-T-C DYZ19 ***
hg19:Y:22341715-A-G hg38:Y:20179829-A-G DYZ19 ***
hg19:Y:22421522-T-C hg38:Y:20259636-T-C DYZ19 ***
hg19:Y:20537954-G-C hg38:Y:18376068-G-C P5_Dst ***
hg19:Y:20537986-C-A hg38:Y:18376100-C-A P5_Dst ***
hg19:Y:22234400-T-G hg38:Y:20072514-T-G DYZ19 ***
hg19:Y:22234445-A-G hg38:Y:20072559-A-G DYZ19 ***
hg19:Y:22248698-A-C hg38:Y:20086812-A-C DYZ19 ***
hg19:Y:22234424-CTCT-GTCA hg38:Y:20072538-CTCT-GTCA DYZ19 ***
hg19:Y:22342845-ATC-GTT hg38:Y:20180959-ATC-GTT DYZ19 ***
hg19:Y:22273615-A-C hg38:Y:20111729-A-C DYZ19 ***
hg19:Y:22273631-G-T hg38:Y:20111745-G-T DYZ19 ***
hg19:Y:22342856-G-C hg38:Y:20180970-G-C DYZ19 ***
hg19:Y:9524052-T-C hg38:Y:9686443-T-C ***
hg19:Y:22250063-A-G hg38:Y:20088177-A-G DYZ19 ***
hg19:Y:22341728-T-G hg38:Y:20179842-T-G DYZ19 ***
hg19:Y:22355074-C-A hg38:Y:20193188-C-A DYZ19 ***
hg19:Y:22421536-C-T hg38:Y:20259650-C-T DYZ19 ***
hg19:Y:22341656-GAAG-CAAC hg38:Y:20179770-GAAG-CAAC DYZ19 ***
hg19:Y:22457243-ACAGCACTTTAAGGTGT-TCAGAAATGAAAGATGC hg38:Y:20295357-ACAGCACTTTAAGGTGT-TCAGAAATGAAAGATGC DYZ19 ***
hg19:Y:58876306-ATTGC-TTTGT hg38:Y:56714561-GCAAT-ACAAA ***
hg19:Y:22256951-A-T hg38:Y:20095065-A-T DYZ19 ***
hg19:Y:22289787-T-G hg38:Y:20127901-T-G DYZ19 ***
hg19:Y:58870538-C-G hg38:Y:56720333-G-C ***
hg19:Y:22289732-GTC-ATA hg38:Y:20127846-GTC-ATA DYZ19 ***
hg19:Y:26180029-T-C hg38:Y:24033882-T-C P1_Y1 ***
hg19:Y:10015017-A-G hg38:Y:10177408-A-G ***
hg19:Y:22341725-C-T hg38:Y:20179839-C-T DYZ19 ***
hg19:Y:22273773-A-T hg38:Y:20111887-A-T DYZ19 ***
hg19:Y:22273748-A-T hg38:Y:20111862-A-T DYZ19 ***
hg19:Y:58869837-G-A hg38:Y:56721034-C-T ***
hg19:Y:13461950-TGGT-AGGC hg38:Y:11306274-TGGT-AGGC ***
hg19:Y:9939470-T-C hg38:Y:10101861-T-C ***
hg19:Y:22328421-T-C hg38:Y:20166535-T-C DYZ19 ***
hg19:Y:13699838-C-T hg38:Y:11544162-C-T DYZ17 ***
hg19:Y:10018241-A-G hg38:Y:10180632-A-G ***
hg19:Y:13139973-G-C hg38:Y:10629459-G-C ***
hg19:Y:10018220-A-G hg38:Y:10180611-A-G FGC57105 ***
hg19:Y:13607617-G-A hg38:Y:11451941-G-A ***
hg19:Y:10015035-T-C hg38:Y:10177426-T-C ***
hg19:Y:18270302-G-T hg38:Y:16158422-G-T ***
hg19:Y:58916969-C-T hg38:Y:56673902-G-A ***
hg19:Y:13485210-C-T hg38:Y:11329534-C-T FT444187 ***
hg19:Y:13311487-C-T hg38:Y:11155811-C-T ***
hg19:Y:22256947-G-A hg38:Y:20095061-G-A DYZ19 ***
hg19:Y:22256945-A-G hg38:Y:20095059-A-G DYZ19 ***
hg19:Y:13311500-C-A hg38:Y:11155824-C-A ***
hg19:Y:9939425-T-C hg38:Y:10101816-T-C ***
hg19:Y:13468666-G-T hg38:Y:11312990-G-T ***
hg19:Y:58916937-G-C hg38:Y:56673934-C-G ***
hg19:Y:22256924-C-G hg38:Y:20095038-C-G DYZ19 ***
hg19:Y:22330081-T-G hg38:Y:20168195-T-G DYZ19 ***
hg19:Y:22297530-G-T hg38:Y:20135644-G-T DYZ19 ***
hg19:Y:22480697-A-T hg38:Y:20318811-A-T DYZ19 ***
hg19:Y:13467533-G-A hg38:Y:11311857-G-A ***
hg19:Y:22297529-A-C hg38:Y:20135643-A-C DYZ19 ***
hg19:Y:3283948-C-T hg38:Y:3415907-C-T ***
hg19:Y:4521218-G-A hg38:Y:4653177-G-A ***
hg19:Y:4843273-G-A hg38:Y:4975232-G-A ***
hg19:Y:5441261-G-A hg38:Y:5573220-G-A ***
hg19:Y:5441269-G-T hg38:Y:5573228-G-T ***
hg19:Y:5479874-G-A hg38:Y:5611833-G-A ***
hg19:Y:6200099-C-A hg38:Y:6332058-C-A IR3_Dst ***
hg19:Y:6200102-C-A hg38:Y:6332061-C-A IR3_Dst ***
hg19:Y:6200112-C-A hg38:Y:6332071-C-A IR3_Dst ***
hg19:Y:7026596-C-G hg38:Y:7158555-C-G ***
hg19:Y:7477339-A-T hg38:Y:7609298-A-T IR1_L ***
hg19:Y:7502632-A-G hg38:Y:7634591-A-G IR1_L ***
hg19:Y:9194680-G-T hg38:Y:9357071-G-T ***
hg19:Y:9556922-T-A hg38:Y:9719313-T-A IR3_Prx ***
hg19:Y:9556925-T-A hg38:Y:9719316-T-A IR3_Prx ***
hg19:Y:9556926-T-A hg38:Y:9719317-T-A IR3_Prx ***
hg19:Y:9556927-T-A hg38:Y:9719318-T-A IR3_Prx ***
hg19:Y:9607754-A-T hg38:Y:9770145-A-T IR3_Prx ***
hg19:Y:9639094-T-G hg38:Y:9801485-T-G IR3_Prx 19×TG***
hg19:Y:9696999-C-T hg38:Y:9859390-C-T IR3_Prx ***
hg19:Y:9939318-C-T hg38:Y:10101709-C-T ***
hg19:Y:9966742-A-G hg38:Y:10129133-A-G ***
hg19:Y:9966747-A-T hg38:Y:10129138-A-T ***
hg19:Y:10015016-C-T hg38:Y:10177407-C-T ***
hg19:Y:10015061-G-T hg38:Y:10177452-G-T ***
hg19:Y:10034586-T-C hg38:Y:10196977-T-C ***
hg19:Y:10066843-G-A hg38:Y:10229234-G-A ***
hg19:Y:10090376-G-A hg38:Y:10252767-G-A ***
hg19:Y:10090781-C-G hg38:Y:10253172-C-G ***
hg19:Y:10092305-T-A hg38:Y:10254696-T-A ***
hg19:Y:10092320-T-A hg38:Y:10254711-T-A ***
hg19:Y:10092324-G-A hg38:Y:10254715-G-A ***
hg19:Y:10092337-G-A hg38:Y:10254728-G-A ***
hg19:Y:10092338-C-A hg38:Y:10254729-C-A ***
hg19:Y:10092344-A-G hg38:Y:10254735-A-G ***
hg19:Y:10092345-T-A hg38:Y:10254736-T-A ***
hg19:Y:10092351-C-T hg38:Y:10254742-C-T ***
hg19:Y:13110380-A-C hg38:Y:10599866-A-C ***
hg19:Y:13110382-C-T hg38:Y:10599868-C-T ***
hg19:Y:13134914-A-C hg38:Y:10624400-A-C ***
hg19:Y:13139996-A-G hg38:Y:10629482-A-G ***
hg19:Y:13467602-T-A hg38:Y:11311926-T-A ***
hg19:Y:13470299-C-T hg38:Y:11314623-C-T ***
hg19:Y:13470315-G-A hg38:Y:11314639-G-A ***
hg19:Y:13473337-C-A hg38:Y:11317661-C-A ***
hg19:Y:13473346-C-A hg38:Y:11317670-C-A ***
hg19:Y:13473347-C-A hg38:Y:11317671-C-A ***
hg19:Y:13473354-G-A hg38:Y:11317678-G-A ***
hg19:Y:13473355-G-A hg38:Y:11317679-G-A ***
hg19:Y:13473398-G-T hg38:Y:11317722-G-T ***
hg19:Y:13485197-A-T hg38:Y:11329521-A-T ***
hg19:Y:13485225-C-A hg38:Y:11329549-C-A ***
hg19:Y:13698841-T-A hg38:Y:11543165-T-A DYZ17 ***
hg19:Y:13698845-T-A hg38:Y:11543169-T-A DYZ17 ***
hg19:Y:13730450-A-G hg38:Y:11574774-A-G DYZ17 ***
hg19:Y:13876403-T-C hg38:Y:11755697-T-C ***
hg19:Y:13877975-G-A hg38:Y:11757269-G-A A13701 ***
hg19:Y:13878017-A-C hg38:Y:11757311-A-C ***
hg19:Y:14441708-T-G hg38:Y:12320981-T-G ***
hg19:Y:14491217-G-A hg38:Y:12370486-A-. ***
hg19:Y:15798254-A-G hg38:Y:13686374-A-G ***
hg19:Y:16309193-C-A hg38:Y:14197313-C-A ***
hg19:Y:17527321-C-A hg38:Y:15415441-C-A ***
hg19:Y:17994779-A-T hg38:Y:15882899-A-T P7_Prx ***
hg19:Y:19714008-A-T hg38:Y:17602128-A-T P5_Prx ***
hg19:Y:19714009-A-T hg38:Y:17602129-A-T P5_Prx ***
hg19:Y:19714029-A-T hg38:Y:17602149-A-T P5_Prx ***
hg19:Y:19714033-A-T hg38:Y:17602153-A-T P5_Prx ***
hg19:Y:19728712-T-A hg38:Y:17616832-T-A P5_Prx ***
hg19:Y:19760026-A-T hg38:Y:17648146-A-T P5_Prx ***
hg19:Y:20005659-A-T hg38:Y:17893779-A-T P5_Prx ***
hg19:Y:20367981-A-G hg38:Y:18206095-A-G P5_Dst ***
hg19:Y:20368204-G-A hg38:Y:18206318-G-A P5_Dst ***
hg19:Y:20368212-C-T hg38:Y:18206326-C-T P5_Dst ***
hg19:Y:20368213-A-G hg38:Y:18206327-A-G P5_Dst ***
hg19:Y:20368216-T-C hg38:Y:18206330-T-C P5_Dst ***
hg19:Y:20368244-T-A hg38:Y:18206358-T-A P5_Dst ***
hg19:Y:20368247-C-T hg38:Y:18206361-C-T P5_Dst ***
hg19:Y:20537857-T-A hg38:Y:18375971-T-A P5_Dst ***
hg19:Y:20544202-C-T hg38:Y:18382316-C-T P5_Dst ***
hg19:Y:20607549-G-A hg38:Y:18445663-G-A P5_Dst ***
hg19:Y:20607600-T-A hg38:Y:18445714-T-A P5_Dst ***
hg19:Y:20612497-A-T hg38:Y:18450611-A-T P4_Prx ***
hg19:Y:20663385-A-G hg38:Y:18501499-A-G P4_Prx ***
hg19:Y:20719456-A-T hg38:Y:18557570-A-T P4_Prx ***
hg19:Y:20719468-G-A hg38:Y:18557582-G-A P4_Prx ***
hg19:Y:20719471-T-G hg38:Y:18557585-T-G P4_Prx ***
hg19:Y:20887674-T-A hg38:Y:18725788-T-A P4_Dst ***
hg19:Y:20887680-T-A hg38:Y:18725794-T-A P4_Dst ***
hg19:Y:20887692-G-T hg38:Y:18725806-G-T P4_Dst ***
hg19:Y:20887694-T-A hg38:Y:18725808-T-A P4_Dst ***
hg19:Y:20974420-T-A hg38:Y:18812534-T-A P4_Dst ***
hg19:Y:20974421-T-A hg38:Y:18812535-T-A P4_Dst ***
hg19:Y:20974453-T-A hg38:Y:18812567-T-A P4_Dst ***
hg19:Y:20974454-T-A hg38:Y:18812568-T-A P4_Dst ***
hg19:Y:22167949-T-C hg38:Y:20006063-T-C ***
hg19:Y:22223303-A-T hg38:Y:20061417-A-T DYZ19 ***
hg19:Y:22226668-T-C hg38:Y:20064782-T-C DYZ19 ***
hg19:Y:22232183-T-C hg38:Y:20070297-T-C DYZ19 ***
hg19:Y:22234348-C-T hg38:Y:20072462-C-T DYZ19 ***
hg19:Y:22236494-G-T hg38:Y:20074608-G-T DYZ19 ***
hg19:Y:22248726-T-G hg38:Y:20086840-T-G DYZ19 ***
hg19:Y:22250041-T-A hg38:Y:20088155-T-A DYZ19 ***
hg19:Y:22250067-T-A hg38:Y:20088181-T-A DYZ19 ***
hg19:Y:22252887-C-T hg38:Y:20091001-C-T DYZ19 ***
hg19:Y:22273746-A-T hg38:Y:20111860-A-T DYZ19 ***
hg19:Y:22297256-G-C hg38:Y:20135370-G-C DYZ19 ***
hg19:Y:22297268-T-C hg38:Y:20135382-T-C DYZ19 ***
hg19:Y:22297291-T-C hg38:Y:20135405-T-C DYZ19 ***
hg19:Y:22314587-A-T hg38:Y:20152701-A-T DYZ19 ***
hg19:Y:22314592-A-T hg38:Y:20152706-A-T DYZ19 ***
hg19:Y:22330090-T-G hg38:Y:20168204-T-G DYZ19 ***
hg19:Y:22330091-A-T hg38:Y:20168205-A-T DYZ19 ***
hg19:Y:22342904-C-G hg38:Y:20181018-C-G DYZ19 ***
hg19:Y:22342927-T-A hg38:Y:20181041-T-A DYZ19 ***
hg19:Y:22342963-A-C hg38:Y:20181077-A-C DYZ19 ***
hg19:Y:22349422-C-A hg38:Y:20187536-C-A DYZ19 ***
hg19:Y:22357636-T-A hg38:Y:20195750-T-A DYZ19 ***
hg19:Y:22358325-G-A hg38:Y:20196439-G-A DYZ19 ***
hg19:Y:22358332-C-A hg38:Y:20196446-C-A DYZ19 ***
hg19:Y:22359909-C-G hg38:Y:20198023-C-G DYZ19 ***
hg19:Y:22360737-T-C hg38:Y:20198851-T-C DYZ19 ***
hg19:Y:22360739-A-T hg38:Y:20198853-A-T DYZ19 ***
hg19:Y:22361619-G-A hg38:Y:20199733-G-A DYZ19 ***
hg19:Y:22361631-G-C hg38:Y:20199745-G-C DYZ19 ***
hg19:Y:22364759-T-A hg38:Y:20202873-T-A DYZ19 ***
hg19:Y:22364862-A-G hg38:Y:20202976-A-G DYZ19 ***
hg19:Y:22365862-C-A hg38:Y:20203976-C-A DYZ19 ***
hg19:Y:22366619-C-T hg38:Y:20204733-C-T DYZ19 ***
hg19:Y:22366624-A-T hg38:Y:20204738-A-T DYZ19 ***
hg19:Y:22366628-C-G hg38:Y:20204742-C-G DYZ19 ***
hg19:Y:22366638-A-C hg38:Y:20204752-A-C DYZ19 ***
hg19:Y:22366693-C-T hg38:Y:20204807-C-T DYZ19 ***
hg19:Y:22366709-G-A hg38:Y:20204823-G-A DYZ19 ***
hg19:Y:22367517-T-G hg38:Y:20205631-T-G DYZ19 ***
hg19:Y:22420061-A-T hg38:Y:20258175-A-T DYZ19 ***
hg19:Y:22421550-A-T hg38:Y:20259664-A-T DYZ19 ***
hg19:Y:22421727-A-G hg38:Y:20259841-A-G DYZ19 ***
hg19:Y:22495815-A-C hg38:Y:20333929-A-C DYZ19 ***
hg19:Y:22496027-T-C hg38:Y:20334141-T-C DYZ19 ***
hg19:Y:22501960-A-T hg38:Y:20340074-A-T DYZ19 ***
hg19:Y:22501987-A-T hg38:Y:20340101-A-T DYZ19 ***
hg19:Y:22504467-T-G hg38:Y:20342581-T-G DYZ19 ***
hg19:Y:22504487-C-A hg38:Y:20342601-C-A DYZ19 ***
hg19:Y:22504501-G-T hg38:Y:20342615-G-T DYZ19 ***
hg19:Y:22504510-A-G hg38:Y:20342624-A-G DYZ19 ***
hg19:Y:25934497-T-C hg38:Y:23788350-T-C P1_Y1 ***
hg19:Y:25934504-G-A hg38:Y:23788357-G-A P1_Y1 ***
hg19:Y:26012417-C-T hg38:Y:23866270-C-T P1_Y1 ***
hg19:Y:26012425-T-A hg38:Y:23866278-T-A P1_Y1 ***
hg19:Y:26012426-C-A hg38:Y:23866279-C-A P1_Y1 ***
hg19:Y:26012433-C-A hg38:Y:23866286-C-A P1_Y1 ***
hg19:Y:26454281-T-A hg38:Y:24308134-T-A P1_Y1 ***
hg19:Y:26454291-T-A hg38:Y:24308144-T-A P1_Y1 ***
hg19:Y:26454324-T-A hg38:Y:24308177-T-A P1_Y1 ***
hg19:Y:26523040-C-A hg38:Y:24376893-C-A P1_Y1 ***
hg19:Y:26523042-C-A hg38:Y:24376895-C-A P1_Y1 ***
hg19:Y:26523046-C-A hg38:Y:24376899-C-A P1_Y1 ***
hg19:Y:27289351-G-A hg38:Y:25143204-G-A P1_g3 ***
hg19:Y:27403840-G-T hg38:Y:25257693-G-T P1_g3 ***
hg19:Y:27457374-G-A hg38:Y:25311227-G-A P1_Y2 ***
hg19:Y:27520244-T-A hg38:Y:25374097-T-A P1_Y2 ***
hg19:Y:27891452-T-A hg38:Y:25745305-T-A P1_Y2 ***
hg19:Y:28063302-A-T hg38:Y:25917155-A-T P1_Y2 ***
hg19:Y:28390094-G-A hg38:Y:26243947-G-A P1_gr2 ***
hg19:Y:28556230-T-G hg38:Y:26410083-T-G ***
hg19:Y:58819478-A-C hg38:Y:56771393-T-G ***
hg19:Y:58819988-C-A hg38:Y:56770883-G-T ***
hg19:Y:58836486-T-C hg38:Y:56754385-A-G ***
hg19:Y:58838271-G-A hg38:Y:56752600-C-T ***
hg19:Y:58843795-G-T hg38:Y:56747076-C-A ***
hg19:Y:58843809-G-C hg38:Y:56747062-C-G ***
hg19:Y:58844890-C-A hg38:Y:56745981-G-T ***
hg19:Y:58848450-A-C hg38:Y:56742421-T-G ***
hg19:Y:58848672-A-T hg38:Y:56742199-T-A ***
hg19:Y:58848676-A-T hg38:Y:56742195-T-A ***
hg19:Y:58848687-C-T hg38:Y:56742184-G-A ***
hg19:Y:58852349-G-A hg38:Y:56738522-C-T ***
hg19:Y:58854376-C-A hg38:Y:56736495-G-T 4×CCATT***
hg19:Y:58865793-A-C hg38:Y:56725078-T-G ***
hg19:Y:58865834-C-A hg38:Y:56725037-G-T ***
hg19:Y:58868132-A-C hg38:Y:56722739-T-G ***
hg19:Y:58869603-T-A hg38:Y:56721268-A-T ***
hg19:Y:58870738-T-C hg38:Y:56720133-A-G ***
hg19:Y:58870766-T-G hg38:Y:56720105-A-C ***
hg19:Y:58874476-A-T hg38:Y:56716395-T-A ***
hg19:Y:58874479-G-C hg38:Y:56716392-C-G ***
hg19:Y:58874589-G-C hg38:Y:56716282-C-G ***
hg19:Y:58879732-T-A hg38:Y:56711139-A-T ***
hg19:Y:58884806-A-C hg38:Y:56706065-T-G ***
hg19:Y:58890761-A-C hg38:Y:56700110-T-G ***
hg19:Y:58895472-G-A hg38:Y:56695399-C-T ***
hg19:Y:58895483-T-A hg38:Y:56695388-A-T ***
hg19:Y:58906659-A-C hg38:Y:56684212-T-G ***
hg19:Y:58909101-T-A hg38:Y:56681770-A-T ***
hg19:Y:58909184-G-T hg38:Y:56681687-C-A ***
hg19:Y:58913058-C-A hg38:Y:56677813-G-T ***
hg19:Y:13494543-TAC-T hg38:Y:11338867-TAC-T ***
hg19:Y:17919853-AAG-A hg38:Y:15807973-AAG-A ***
hg19:Y:22330069-TG-GT hg38:Y:20168183-TG-GT DYZ19 ***
hg19:Y:58972574-C-CAATTA hg38:Y:56826427-C-CAATTA ***
hg19:Y:22256943-GTATG-ATGTA hg38:Y:20095057-GTATG-ATGTA DYZ19 ***
hg19:Y:13262767-CCT-GCC hg38:Y:11107091-CCT-GCC ***
hg19:Y:10018232-CA-TG hg38:Y:10180623-CA-TG ***
hg19:Y:28008237-G-GAGAA hg38:Y:25862090-G-GAGAA P1_Y2 14×AGAA***
hg19:Y:18576435-AACAC-A hg38:Y:16464555-AACAC-A 15×AC***
hg19:Y:2845850-GAAT-AAAA hg38:Y:2977809-GAAT-AAAA ***
hg19:Y:5010119-A-AACAC hg38:Y:5142078-A-AACAC ***
hg19:Y:6573333-T-TA hg38:Y:6705292-T-TA 10×A***
hg19:Y:6586785-AC-CCT hg38:Y:6718744-AC-CCT ***
hg19:Y:7362062-A-ATT hg38:Y:7494021-A-ATT ***
hg19:Y:8740664-G-GTTTTTTT hg38:Y:8872623-G-GTTTTTTT 10×T***
hg19:Y:9311681-C-CTTTTTTT hg38:Y:9474072-C-CTTTTTTT 14×T***
hg19:Y:9351150-TCATATATATATATATATA-T hg38:Y:9513541-TCATATATATATATATATA-T ***
hg19:Y:9524048-T-TACACAC hg38:Y:9686439-T-TACACAC ***
hg19:Y:10012977-GTGAATTCT-CTGAGTTCC hg38:Y:10175368-GTGAATTCT-CTGAGTTCC ***
hg19:Y:10013011-CGGCTTGG-GGGTTTGC hg38:Y:10175402-CGGCTTGG-GGGTTTGC ***
hg19:Y:13129515-AGGTTC-TGGTAA hg38:Y:10619001-AGGTTC-TGGTAA ***
hg19:Y:13134921-CCTCT-GCTCA hg38:Y:10624407-CCTCT-GCTCA ***
hg19:Y:13140078-GCGTGTGAT-AC hg38:Y:10629564-GCGTGTGAT-AC ***
hg19:Y:13140091-TTAAATCAGAATTCCTT-C hg38:Y:10629577-TTAAATCAGAATTCCTT-C ***
hg19:Y:13216014-TGTTGG-CAC hg38:Y:11060338-TGTTGG-CAC ***
hg19:Y:13256139-CTTTC-GTTTT hg38:Y:11100463-CTTTC-GTTTT ***
hg19:Y:13267778-C-CCCCCCCG hg38:Y:11112102-C-CCCCCCCG ***
hg19:Y:13460188-CCCTC-GCCTA hg38:Y:11304512-CCCTC-GCCTA ***
hg19:Y:13463155-CA-TG hg38:Y:11307479-CA-TG ***
hg19:Y:13465822-ATAT-CTAG hg38:Y:11310146-ATAT-CTAG ***
hg19:Y:13467511-AG-CT hg38:Y:11311835-AG-CT ***
hg19:Y:13467564-CT-C hg38:Y:11311888-CT-C ***
hg19:Y:13467568-TG-CA hg38:Y:11311892-TG-CA ***
hg19:Y:13470394-TGG-CAT hg38:Y:11314718-TGG-CAT ***
hg19:Y:13473344-TCCC-CCAA hg38:Y:11317668-TCCC-CCAA ***
hg19:Y:13473354-GG-AA hg38:Y:11317678-GG-AA ***
hg19:Y:13479052-AGAAC-GGAAT hg38:Y:11323376-AGAAC-GGAAT ***
hg19:Y:13480153-ATCCCCGTC-TACACCCTG hg38:Y:11324477-ATCCCCGTC-TACACCCTG ***
hg19:Y:13481403-TAGAA-AAGAC hg38:Y:11325727-TAGAA-AAGAC ***
hg19:Y:13494558-TTTT-ATTA hg38:Y:11338882-TTTT-ATTA ***
hg19:Y:13661307-A-AATGGC hg38:Y:11505631-A-AATGGC DYZ17 ***
hg19:Y:13698855-ATGGTCTCCAAT-GTGGACTCAAGA hg38:Y:11543179-ATGGTCTCCAAT-GTGGACTCAAGA DYZ17 ***
hg19:Y:13701069-TATTGGAAT-GATCAGAAC hg38:Y:11545393-TATTGGAAT-GATCAGAAC DYZ17 ***
hg19:Y:13701985-ACTA-CCTC hg38:Y:11546309-ACTA-CCTC DYZ17 ***
hg19:Y:14496296-TG-GATGGA ***
hg19:Y:15015255-C-CTTTTTTTAACT hg38:Y:12903342-G-GCTTTTTTTAA 24×T***
hg19:Y:15138012-C-CTTTT hg38:Y:13026099-C-CTTTT 15×T***
hg19:Y:17604931-GTTTTTTTTTT-G hg38:Y:15493051-GTTTTTTTTTT-G 24×T***
hg19:Y:18395723-TTATATATATATATATATATA-T hg38:Y:16283843-TTATATATATATATATATATA-T P6_Gap 27×TA***
hg19:Y:19728720-CTAG-GCAT hg38:Y:17616840-CTAG-GCAT P5_Prx ***
hg19:Y:21556919-C-CTT hg38:Y:19395033-C-CTT 23×T***
hg19:Y:21665727-A-ATAAC hg38:Y:19503841-A-ATAAC ***
hg19:Y:22023201-C-CTTTTTTT hg38:Y:19861315-C-CTTTTTTT 20×T***
hg19:Y:22127975-C-CTTTTTTT hg38:Y:19966089-C-CTTTTTTT 20×T***
hg19:Y:22236443-CC-GA hg38:Y:20074557-CC-GA DYZ19 ***
hg19:Y:22236502-GACC-CACA hg38:Y:20074616-GACC-CACA DYZ19 ***
hg19:Y:22261484-T-TCCGA hg38:Y:20099598-T-TCCGA DYZ19 ***
hg19:Y:22263780-GTGT-ATGG hg38:Y:20101894-GTGT-ATGG DYZ19 ***
hg19:Y:22292962-TG-GT hg38:Y:20131076-TG-GT DYZ19 ***
hg19:Y:22292968-AT-GA hg38:Y:20131082-AT-GA DYZ19 ***
hg19:Y:22337200-CATGTC-TATGTA hg38:Y:20175314-CATGTC-TATGTA DYZ19 ***
hg19:Y:22352888-ACTC-TATT hg38:Y:20191002-ACTC-TATT DYZ19 ***
hg19:Y:22366823-AG-GC hg38:Y:20204937-AG-GC DYZ19 ***
hg19:Y:22457227-C-CT hg38:Y:20295341-C-CT DYZ19 ***
hg19:Y:25268595-AG-A hg38:Y:23122448-AG-A P2_r1 ***
hg19:Y:25268600-TAG-AAA hg38:Y:23122453-TAG-AAA P2_r1 ***
hg19:Y:26463097-C-CTTTTT hg38:Y:24316950-C-CTTTTT P1_Y1 36×T***
hg19:Y:27997643-GA-G hg38:Y:25851496-GA-G P1_Y2 16×A***
hg19:Y:28551847-TCTC-T hg38:Y:26405700-TCTC-T ***
hg19:Y:28761382-C-CAAA hg38:Y:26615235-C-CAAA 31×A***
hg19:Y:58823276-CCATTCCATCT-C hg38:Y:56767576-AATGGAATGAG-A ***
hg19:Y:58831368-TTCCAGTCCATTAT-ATCGATTCAATTCC hg38:Y:56759490-ATAATGGACTGGAA-GGAATTGAATCGAT ***
hg19:Y:58839782-GTG-TTT hg38:Y:56751087-CAC-AAA ***
hg19:Y:58848672-ATCCA-TTCCT hg38:Y:56742195-TGGAT-AGGAA ***
hg19:Y:58848701-T-TTTCCATTCCA hg38:Y:56742157-A-AAATGGAATGG ***
hg19:Y:58870534-TTTCCAT-ATTCGTTC hg38:Y:56720331-ATGGAAA-GAACGAAT ***
hg19:Y:58870746-ATTCCATTT-TTTGGATTC hg38:Y:56720117-AAATGGAAT-GAATCCAAA ***
hg19:Y:58908655-TCTTCG-CATTCT hg38:Y:56682211-CGAAGA-AGAATG ***
hg19:Y:58913232-TGATG-GAATT hg38:Y:56677635-CATCA-AATTC ***
hg19:Y:58972572-T-TTCAAG hg38:Y:56826425-T-TTCAAG ***
hg19:Y:59006823-AAAAT-CACAC hg38:Y:56860676-AAAAT-CACAC ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.