Tree Position

R-U106/S21 > Z2265 > Z381/S263 > Z301/S499 > L48 > ZZ63 > Y10968 > ZZ64 > Y9085 > Y10969 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
330810
BigY2
330810
6142132-C-A 6274091-C-A IR3_Dst ***A*
13478854-A-C 11323178-A-C A*
23721352-T-C 21559466-T-C ***A*
18276068-G-T 16164188-G-T P6_Prx ***A*
18345551-G-A 16233671-G-A P6_Prx ***A*
24352860-C-T 22206713-C-T P3_t1 ***A*
19642788-G-C 17530908-G-C P5_Prx ***A*
18941956-A-T 16830076-A-T BY124956 YY++
19080763-G-A 16968883-G-A BY126108 YY++
17737089-G-T 15625209-G-T BY116991 YY++
15633602-G-A 13521722-G-A BY103010 YY++
7824090-C-T 7956049-C-T BY67976 YY++
22271645-G-T 20109759-G-T DYZ19 ++
15128956-C-CT 13017043-C-CT ++
14870436-G-A 12758506-G-A BY98121 YY++
14151844-G-A 12031138-G-A BY93424 YY++
13693846-T-G 11538170-T-G BY54362 ++
13652657-G-A 11496981-G-A BY87122 ++
13299213-T-A 11143537-T-A +**
8571842-T-A 8703801-T-A BY74140 YY++
8372097-G-A 8504056-G-A BY53766 YY++
7912042-C-T 8044001-C-T BY68699 YY++
16375673-TA-T 14263793-TA-T ++
22232883-A-T 20070997-A-T DYZ19 +
13688045-T-C 11532369-T-C BY49141 +
22458616-G-T 20296730-G-T YP611 DYZ19 ++
22475844-T-A 20313958-T-A BY53131 DYZ19 **+
23099000-C-G 20937114-C-G BY142951 YY++
21724655-C-T 19562769-C-T BY135000 YY++
23245250-C-T 21083364-C-T BY144030 YY++
23368339-A-G 21206453-A-G BY144846 YY++
22255026-A-G 20093140-A-G DYZ19 +**
6124452-G-C 6256411-G-C ZS6412 +
20648-G-A +
22509765-C-G 20347879-C-G DYZ19 ****
11025554-C-A **
11648830-G-T **
11025546-T-C **
11026836-A-G **
13430433-C-A 11274757-C-A **
13219006-C-A 11063330-C-A **
13198770-T-C 11043094-T-C **
11035948-T-C **
11032005-A-C **
11030933-C-A **
30373-T-G **
11025541-T-C **
10986797-A-C **
10951752-G-T **
10954541-T-C **
10954915-C-T **
10956599-C-TGATG **
10956609-C-CATAGA **
10984748-C-A **
10984778-C-A **
10986761-G-C **
10987565-A-C **
11016432-C-A **
10988425-G-T **
10990900-C-A **
10991726-A-G **
10998687-G-C **
10999222-C-A **
13855901-A-T 11735195-A-T **
11007079-C-G **
11007127-T-C **
11013711-T-A **
11653550-T-A **
14263289-G-T 12142583-G-T **
13860550-G-A 11739844-G-A **
14420502-C-A 12299777-C-A **
15105041-C-A 12993129-C-A **
15065003-C-A 12953095-C-A **
14931723-C-A 12819788-C-A **
14831903-T-C 12719970-T-C **
14808457-C-A 12696528-C-A **
14736072-A-T 12624140-A-T **
14555139-C-A 12443340-C-A **
14512514-A-T 12400719-A-T **
14474923-G-A 12354192-G-A **
14473625-C-G 12352894-C-G **
14473614-A-C 12352883-A-C **
14458025-T-C 12337298-T-C **
14448267-GTTTCTCATTCAT-G 12327540-GTTTCTCATTCAT-G **
14445152-C-A 12324425-C-A **
14396018-C-A 12275314-C-A **
13860634-C-A 11739928-C-A **
14200469-C-A 12079763-C-A **
13899222-T-C 11778516-T-C **
13958693-C-A 11837987-C-A **
13976447-G-C 11855741-G-C **
14071467-C-A 11950761-C-A **
14118247-T-TC 11997541-T-TC **
14184611-C-G 12063905-C-G **
10951740-C-CAATTA **
14367638-C-A 12246934-C-A **
14272417-C-A 12151711-C-A **
14272504-T-C 12151798-T-C **
14284122-C-A 12163416-C-A **
14300121-C-A 12179415-C-A **
14324363-T-A 12203657-T-A **
14351218-G-T 12230513-G-T **
10951751-A-G **
10909469-C-T **
10950589-C-A **
10663651-CA-C **
10763035-CTATTCCATTA-C **
10761467-C-T **
10760292-A-C **
10760279-A-T **
10759152-A-G **
10752926-T-C **
10752239-C-G **
10751424-C-A **
10747057-G-C **
10690922-C-G **
10690903-C-T **
10690106-C-A **
10685241-G-T **
10668864-C-A **
10654662-G-T **
10763071-C-T **
9110378-G-T **
8692932-G-T 8824891-G-T **
8748963-C-A 8880922-C-A **
8748986-C-G 8880945-C-G **
8832676-C-A 8964635-C-A **
8865960-G-T 8997919-G-T **
8913477-C-A 9045436-C-A **
9493534-C-T 9655925-C-T **
9971667-T-C 10134058-T-C **
9499573-T-C 9661964-T-C **
9499733-C-A 9662124-C-A **
9499981-C-A 9662372-C-A **
9499989-C-T 9662380-C-T **
9926790-C-A 10089181-C-A **
9950376-G-T 10112767-G-T **
10763058-C-CTGTA **
10779854-T-G **
10947818-T-G **
10909481-T-G **
10946833-A-C **
10945508-T-C **
10943886-A-C **
10941733-AT-A **
10939763-A-G **
10939495-T-C **
10938814-G-T **
10930713-C-A **
10916415-G-T **
10914758-G-T **
10909518-G-T **
10909516-A-T **
10909509-A-G **
10909483-G-T **
15157856-G-C 13045943-G-C **
10789934-T-C **
10841628-T-A **
10802296-C-A **
10813535-T-C **
10820909-C-A **
10833363-A-G **
10833741-T-G **
10836138-A-C **
10843520-C-A **
10900534-C-A **
10847246-T-G **
10849405-A-T **
10852313-C-A **
10863622-G-C **
10865225-T-A **
10898786-A-T **
15114651-C-A 13002738-C-A **
16520684-C-A 14408804-C-A **
15185152-T-G 13073238-T-G **
21792599-C-A 19630713-C-A **
22171565-A-G 20009679-A-G **
22171542-G-A 20009656-G-A **
22168771-C-T 20006885-C-T **
22123103-A-G 19961217-A-G **
22052675-C-A 19890789-C-A **
21996289-G-T 19834403-G-T **
21959211-C-A 19797325-C-A **
21950157-C-T 19788271-C-T **
21940101-C-T 19778215-C-T **
21940086-G-A 19778200-G-A **
21940084-A-G 19778198-A-G **
21940082-G-A 19778196-G-A **
21940002-G-T 19778116-G-T **
21822964-C-A 19661078-C-A **
21771615-T-A 19609729-T-A **
22793881-C-A 20631995-C-A **
21108615-C-A 18946729-C-A **
20603897-A-G 18442011-A-G P5_Dst **
20739811-G-A 18577925-G-A P4_Prx **
20809833-C-A 18647947-C-A P4_Gap **
20968111-T-A 18806225-T-A P4_Dst **
21056020-C-G 18894134-C-G **
21073370-C-A 18911484-C-A **
21202475-T-C 19040589-T-C **
21635199-A-C 19473313-A-C **
21283392-C-A 19121506-C-A **
21347939-A-C 19186053-A-C **
21389788-C-A 19227902-C-A **
21472330-C-A 19310444-C-A **
21476501-T-G 19314615-T-G **
21556510-AT-A 19394624-AT-A **
22171679-A-C 20009793-A-C **
22920632-A-G 20758746-A-G **
20062622-T-C 17950742-T-C P5_Prx **
27039321-C-A 24893174-C-A P1_r4 **
56860413-G-T **
56848559-C-A **
56845022-T-G **
56844695-G-T **
56843291-C-A **
28731846-T-C 26585699-T-C **
28724924-C-A 26578777-C-A **
28658439-C-A 26512292-C-A **
28657611-C-A 26511464-C-A **
28645299-A-G 26499152-A-G **
28587268-C-A 26441121-C-A **
28506154-C-T 26360007-C-T **
27546756-T-TC 25400609-T-TC P1_Y2 **
27546695-T-A 25400548-T-A P1_Y2 **
26047504-T-C 23901357-T-C P1_Y1 **
22991313-G-C 20829427-G-C **
23471033-T-C 21309147-T-C **
23176882-T-C 21014996-T-C **
23204471-C-A 21042585-C-A **
23315816-C-A 21153930-C-A **
23386443-A-G 21224557-A-G **
23395752-T-C 21233866-T-C **
23460611-C-A 21298725-C-A **
24290775-A-C 22144628-A-C P3_t1 **
25931555-GA-G 23785408-GA-G P1_Y1 **
24468896-G-T 22322749-G-T **
24611431-G-T 22465284-G-T P3_t2 **
25108815-A-T 22962668-A-T g1 **
25108827-C-A 22962680-C-A g1 **
25538539-CTG-C 23392392-CTG-C P1_gr1 **
25899706-G-C 23753559-G-C P1_Y1 **
20213218-T-G 18051332-T-G P5_Dst **
19926968-T-G 17815088-T-G P5_Prx **
15201356-A-T 13089442-A-T **
16540475-G-T 14428595-G-T **
17222775-C-A 15110895-C-A **
17218470-C-T 15106590-C-T **
17177115-G-T 15065235-G-T **
17170374-C-A 15058494-C-A **
17165446-T-C 15053566-T-C **
17097273-T-A 14985393-T-A **
17086875-C-A 14974995-C-A **
17029022-C-A 14917142-C-A **
16842733-A-T 14730853-A-T **
16709895-A-C 14598015-A-C **
16708474-C-A 14596594-C-A **
16636772-C-A 14524892-C-A **
16621352-C-A 14509472-C-A **
16577577-G-A 14465697-G-A **
8672054-T-A 8804013-T-A **
17378994-G-T 15267114-G-T **
15585060-T-C 13473180-T-C **
15280327-C-A 13168426-C-A **
15282972-T-A 13171071-T-A **
15342632-A-G 13230751-A-G **
15404303-T-A 13292423-T-A **
15450281-C-A 13338401-C-A **
15491865-G-GTATA 13379985-G-GTATA 8×TA**
15739813-C-A 13627933-C-A FT61569 **
16498185-A-G 14386305-A-G **
16019217-T-C 13907337-T-C **
16228106-A-G 14116226-A-G **
16316662-G-A 14204782-G-A **
16450327-G-A 14338447-G-A **
16478325-A-C 14366445-A-C **
16494351-C-T 14382471-C-T **
17374507-T-G 15262627-T-G **
17446905-C-A 15335025-C-A **
19663350-G-A 17551470-G-A P5_Prx **
19331417-C-A 17219537-C-A **
19201017-C-G 17089137-C-G **
19216525-C-A 17104645-C-A **
19249612-C-A 17137732-C-A **
19268413-G-T 17156533-G-T **
19286383-G-A 17174503-G-A **
19313639-AT-A 17201759-AT-A **
19331468-C-A 17219588-C-A **
18959394-A-T 16847514-A-T **
19340221-G-A 17228341-G-A **
19367420-C-A 17255540-C-A **
19523337-T-G 17411457-T-G **
19527153-G-A 17415273-G-A **
19539602-T-A 17427722-T-A **
19547809-T-C 17435929-T-C **
19042591-C-T 16930711-C-T **
18838785-T-A 16726905-T-A **
17569060-G-A 15457180-G-A **
17804274-C-A 15692394-C-A **
17624692-A-T 15512812-A-T **
17644300-TC-T 15532420-TC-T **
17644310-T-G 15532430-T-G **
17644324-G-T 15532444-G-T **
17644324-G-GT 15532444-G-GT **
17741426-C-T 15629546-C-T **
17884564-G-T 15772684-G-T **
18812137-C-A 16700257-C-A **
17885606-G-T 15773726-G-T **
17964006-C-A 15852126-C-A **
18094321-C-A 15982441-C-A **
18197929-C-A 16086049-C-A **
18242080-C-A 16130200-C-A **
18596445-A-G 16484565-A-G **
8674106-C-A 8806065-C-A **
7986238-T-G 8118197-T-G **
8173745-T-C 8305704-T-C **
9915477-C-A 10077868-C-A **
13596415-C-A 11440739-C-A **
18223920-C-A 16112040-C-A **
16033699-C-A 13921819-C-A **
14078819-C-A 11958113-C-A **
7142208-C-A 7274167-C-A **
8848308-C-A 8980267-C-A **
17117442-C-A 15005562-C-A **
8698705-C-A 8830664-C-A **
28484351-C-A 26338204-C-A **
10690901-G-C **
10950602-C-A **
15034972-C-A 12923060-C-A **
7080188-C-A 7212147-C-A **
10690907-G-C **
25246479-T-TGG 23100332-T-TGG P2_r1 **
21703145-C-A 19541259-C-A **
10984150-C-A **
17946946-GA-G 15835066-GA-G **
10993265-C-A **
20632047-G-T 18470161-G-T P4_Prx **
28504768-C-A 26358621-C-A **
19926976-T-A 17815096-T-A P5_Prx **
17030888-C-A 14919008-C-A **
11663562-C-A **
15682801-C-A 13570921-C-A **
2812754-C-A 2944713-C-A **
2740468-C-A 2872427-C-A **
15338839-C-A 13226957-C-A **
11031974-A-C **
22008428-C-A 19846542-C-A **
23465300-G-T 21303414-G-T **
17490940-C-A 15379060-C-A **
13460219-C-A 11304543-C-A **
8171929-C-A 8303888-C-A **
18255885-G-C 16144005-G-C **
10863546-G-T **
28558588-T-C 26412441-T-C **
16494344-G-A 14382464-G-A **
18050102-C-A 15938222-C-A **
15168826-C-A 13056912-C-A **
10969309-C-A **
10759170-C-T **
28645304-C-A 26499157-C-A **
5278175-T-G 5410134-T-G **
5278174-C-T 5410133-C-T **
19088565-C-A 16976685-C-A **
16921346-C-A 14809466-C-A **
8016923-T-G 8148882-T-G **
10690937-G-C **
10654417-C-A **
10654401-C-A **
9618360-G-T 9780751-G-T IR3_Prx **
25972278-A-C 23826131-A-C P1_Y1 **
18900616-C-A 16788736-C-A **
15358726-C-A 13246845-C-A **
13993385-C-A 11872679-C-A **
10967625-C-A **
17870974-C-A 15759094-C-A **
15612364-C-A 13500484-C-A **
17854381-T-C 15742501-T-C **
4918389-C-A 5050348-C-A **
3346978-C-A 3478937-C-A **
9702948-G-A 9865339-G-A IR3_Prx **
22255037-A-T 20093151-A-T DYZ19 **
16340147-GAAAAAA-G 14228267-GAAAAAA-G 22×A**
13641128-C-A 11485452-C-A **
14562813-C-A 12451013-C-A **
22902054-C-A 20740168-C-A **
22202553-C-A 20040667-C-A **
10783182-G-T **
19663356-G-A 17551476-G-A BY211889 P5_Prx **
18256249-C-A 16144369-C-A **
19135114-G-T 17023234-G-T **
8016929-T-C 8148888-T-C **
15235428-T-C 13123514-T-C **
22205479-C-A 20043593-C-A **
11031256-C-A **
22255036-A-C 20093150-A-C DYZ19 **
24278066-C-A 22131919-C-A P3_b1 **
19340227-C-T 17228347-C-T **
10068280-A-G 10230671-A-G **
10068265-T-G 10230656-T-G **
10068267-T-C 10230658-T-C **
21511143-C-T 19349257-C-T Y2948 Z20958 **
15491887-ATC-A 13380007-ATC-A **
14627186-G-A 12515254-G-A Y21798 **
10068256-T-G 10230647-T-G **
5853489-C-T 5985448-C-T **
21940097-C-T 19778211-C-T **
15491906-TAG-T 13380026-TAG-T **
20533163-C-T 18371277-C-T P5_Dst **
14313523-A-C 12192817-A-C ****
2708727-C-G 2840686-C-G **
14196361-C-A 12075655-C-A **
2892582-A-C 3024541-A-C **
10749151-T-C **
23037237-A-T 20875351-A-T 20×T**
17644319-G-T 15532439-G-T **
9075338-C-A 9237729-C-A **
10835500-ACCATTCCATT-A **
15971168-C-A 13859288-C-A **
10876928-C-A **
15468582-C-A 13356702-C-A **
7181772-C-A 7313731-C-A **
21235031-C-A 19073145-C-A **
17136950-G-T 15025070-G-T **
14509981-C-A 12398186-C-A **
18292840-C-A 16180960-C-A P6_Prx **
15619542-C-A 13507662-C-A **
10884127-C-A **
11018208-G-C **
6776388-C-A 6908347-C-A **
7590441-G-T 7722400-G-T **
11018271-T-G **
11018250-C-A **
11018215-T-C **
11018197-C-T **
16076067-C-A 13964187-C-A **
7202307-C-A 7334266-C-A **
9057405-G-T **
17387375-C-A 15275495-C-A **
9985982-C-A 10148373-C-A **
18256264-C-A 16144384-C-A **
17675528-C-A 15563648-C-A **
19391718-G-T 17279838-G-T **
16847563-C-A 14735683-C-A **
2708153-C-A 2840112-C-A **
4687604-G-T 4819563-G-T **
5325583-C-A 5457542-C-A **
5278183-A-T 5410142-A-T **
5277728-G-T 5409687-G-T **
5274772-G-A 5406731-G-A **
5274363-G-A 5406322-G-A **
5214339-C-T 5346298-C-T **
5155121-C-A 5287080-C-A **
5080652-C-A 5212611-C-A **
5040463-A-G 5172422-A-G **
4959440-C-G 5091399-C-G **
4914980-C-T 5046939-C-T **
4914873-C-A 5046832-C-A **
4851355-C-A 4983314-C-A **
4703021-C-T 4834980-C-T **
4653011-G-T 4784970-G-T **
5523643-T-C 5655602-T-C **
3959626-C-A 4091585-C-A **
3409129-G-C 3541088-G-C **
3409735-C-A 3541694-C-A **
3467719-C-A 3599678-C-A **
3536283-G-T 3668242-G-T **
3787755-C-A 3919714-C-A **
3817561-C-A 3949520-C-A **
3961445-A-C 4093404-A-C **
4601757-C-A 4733716-C-A **
4013303-C-A 4145262-C-A **
4103319-T-C 4235278-T-C **
4107941-T-C 4239900-T-C **
4244526-A-G 4376485-A-G **
4509514-A-C 4641473-A-C **
4567230-C-A 4699189-C-A **
5337877-C-A 5469836-C-A **
5591656-T-G 5723615-T-G **
3284695-A-C 3416654-A-C **
7431659-T-C 7563618-T-C **
7307695-T-A 7439654-T-A **
7310473-T-A 7442432-T-A **
7314579-C-A 7446538-C-A **
7366335-C-A 7498294-C-A **
7431652-T-C 7563611-T-C **
7431655-T-C 7563614-T-C **
7433454-A-G 7565413-A-G **
7281798-C-A 7413757-C-A **
7650585-C-A 7782544-C-A **
7695740-C-A 7827699-C-A **
7709340-C-T 7841299-C-T **
7709450-T-C 7841409-T-C **
7774157-A-T 7906116-A-T **
7868042-C-A 8000001-C-A **
7307672-A-T 7439631-A-T **
7269692-A-T 7401651-A-T **
5629466-G-A 5761425-G-A **
7013670-C-G 7145629-C-G **
5727898-G-A 5859857-G-A **
5906683-G-T 6038642-G-T **
5954170-G-T 6086129-G-T **
6004223-G-T 6136182-G-T **
6514137-C-A 6646096-C-A **
6771622-C-G 6903581-C-G **
7050199-C-A 7182158-C-A **
7253734-C-A 7385693-C-A **
7085279-C-A 7217238-C-A **
7108231-C-A 7240190-C-A **
7148168-T-C 7280127-T-C **
7148215-G-C 7280174-G-C **
7188307-C-T 7320266-C-T **
7241021-C-A 7372980-C-A **
3345797-T-A 3477756-T-A **
4637700-G-C 4769659-G-C **
14862910-C-A 12750976-C-A **
3599401-C-A 3731360-C-A **
10826996-C-A **
17136953-A-T 15025073-A-T **
13472107-C-A 11316431-C-A **
10765821-C-A **
10890356-C-A **
9508519-C-A 9670910-C-A **
19161117-C-A 17049237-C-A **
10690876-T-A **
16921378-C-A 14809498-C-A **
23442672-C-A 21280786-C-A **
2649720-G-A 2781679-G-A **
19296777-C-A 17184897-C-A **
10690890-C-T **
3110315-G-T 3242274-G-T **
17854391-C-A 15742511-C-A **
2688850-T-A 2820809-T-A **
14379287-T-A 12258583-T-A **
15824043-C-A 13712163-C-A **
13253216-G-T 11097540-G-T **
16877052-C-A 14765172-C-A **
16526553-C-A 14414673-C-A **
10971195-C-A **
9926807-C-A 10089198-C-A **
10969153-C-A **
2708709-C-T 2840668-C-T **
2771299-C-A 2903258-C-A **
2885807-T-C 3017766-T-C **
2892561-G-TT 3024520-G-TT **
2892577-C-T 3024536-C-T **
2730135-C-A 2862094-C-A **
2892698-C-A 3024657-C-A **
2926455-G-A 3058414-G-A **
2929272-C-A 3061231-C-A **
2708700-T-C 2840659-T-C **
2708686-C-T 2840645-C-T **
2668383-C-A 2800342-C-A **
2665392-C-T 2797351-C-T **
2665381-G-A 2797340-G-A **
24666265-C-A 22520118-C-A P3_b2 ***
18043102-A-AAC 15931222-A-AAC 13×AC***
26921006-T-C 24774859-T-C P1_r3 ***
23203739-G-T 21041853-G-T ***
7322505-C-A 7454464-C-A ***
21172164-T-A 19010278-T-A ***
9959966-C-A 10122357-C-A ***
7331315-G-T 7463274-G-T ***
22229193-T-A 20067307-T-A BY23226 DYZ19 ***
9764319-A-G 9926710-A-G ***
8725444-A-G 8857403-A-G ***
22288819-G-C 20126933-G-C DYZ19 ***
24942416-A-G 22796269-A-G g1 ***
22229191-T-C 20067305-T-C BY23225 DYZ19 ***
56842364-C-A ***
22340292-C-A 20178406-C-A A17414 DYZ19 ***
9007987-T-A 9170378-T-A ***
17983744-C-A 15871864-C-A ***
22280480-A-T 20118594-A-T DYZ19 ***
18612782-T-C 16500902-T-C ***
22229201-A-G 20067315-A-G BY23228 DYZ19 ***
22447137-T-G 20285251-T-G DYZ19 ***
13588205-C-A 11432529-C-A ***
22244017-C-T 20082131-C-T DYZ19 ***
14585830-A-T 12474030-A-T ***
22255090-G-C 20093204-G-C BY214249 DYZ19 ***
22287864-T-C 20125978-T-C DYZ19 ***
8785417-C-A 8917376-C-A ***
23854877-G-A 21692991-G-A ***
10768590-G-A ***
23315735-A-T 21153849-A-T ***
56850197-G-T ***
16547092-C-A 14435212-C-A ***
9639092-C-A 9801483-C-A IR3_Prx ***
16354848-G-T 14242968-G-T ***
56844378-G-A ***
21905349-C-A 19743463-C-A ***
11657107-A-G ***
2752399-C-A 2884358-C-A ***
16522302-C-A 14410422-C-A ***
2750686-CA-C 2882645-CA-C 8×A***
15109772-G-T 12997859-G-T ***
16282398-C-A 14170518-C-A 24×A***
14394467-CT-C 12273763-CT-C ***
18953059-A-C 16841179-A-C 8×G***
4143990-C-A 4275949-C-A ***
2819960-CTTT-C,CTTTT 2951919-CTTT-C,CTTTT 17×T***
17529174-G-A 15417294-G-A ***
3012777-C-T 3144736-C-T ***
18857565-C-T 16745685-C-T 9×T***
16175295-C-A 14063415-C-A ***
15109025-CTT-C,CTTT 12997112-CTT-C,CTTT 11×T***
10763330-CCTTT-C,CCCCT ***
7241780-G-T 7373739-G-T ***
22066318-C-A 19904432-C-A ***
21960352-T-C 19798466-T-C ***
11028270-C-A ***
15401860-CAA-C 13289980-CAA-C 9×A***
6773553-C-A 6905512-C-A ***
15422098-C-A 13310218-C-A 20×A***
21608186-G-T 19446300-G-T ***
16041741-C-A 13929861-C-A ***
4144028-C-A 4275987-C-A ***
13644800-C-A 11489124-C-A ***
13579821-G-A 11424145-G-A ***
21373546-T-C 19211660-T-C ***
15749588-T-TTC 13637708-T-TTC ***
2803377-C-A 2935336-C-A ***
15874319-C-A 13762439-C-A 15×A***
22229188-A-C 20067302-A-C BY23224 DYZ19 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 3308101052812076061717683937
Kit: 330810948447477177747622201
Used in age calculations1052812077177747683937
Counts of SNPs1414
Variant counts last updated 2019-09-27 03:16:37.



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