Beatty
FTDNA: 237714, BigY2: 237714Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 237714 | BigY2 237714 |
---|---|---|---|---|---|---|---|---|---|
15502153-T-C | 13390273-T-C | S17213 | Y | Y | ** | + | |||
23849192-G-C | 21687306-G-C | BY148345 | Y | + | + | ||||
8092471-G-A | 8224430-G-A | BY41632 | Y | Y | + | ||||
8092472-AC-A | 8224431-AC-A | + | |||||||
13851652-G-A | 11730946-G-A | BY41794 | + | ||||||
24415720-ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT-A | 22269573-ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT-A | + | |||||||
15259-A-C | + | ||||||||
15502151-T-TAG | 13390271-T-TAG | *** | * | ||||||
22236852-G-A | 20074966-G-A | DYZ19 | ** | ||||||
22201709-C-A | 20039823-C-A | FT234700 | ** | ||||||
16422426-C-A | 14310546-C-A | ** | |||||||
13224476-G-A | 11068800-G-A | ** | |||||||
15685108-C-A | 13573228-C-A | ** | |||||||
14698396-T-A | 12586462-T-A | ** | |||||||
14781066-C-A | 12669136-C-A | ** | |||||||
17144055-C-T | 15032175-C-T | ** | |||||||
25931556-A-G | 23785409-A-G | BY30902 | P1_Y1 | 9×AAGG | ** | ||||
7165301-G-T | 7297260-G-T | ** | |||||||
9029736-C-T | 9192127-C-T | 16×T | ** | ||||||
6839622-A-G | 6971581-A-G | ** | |||||||
7346536-C-A | 7478495-C-A | ** | ** | ||||||
22365999-A-G | 20204113-A-G | DYZ19 | ** | ||||||
7991310-C-A | 8123269-C-A | ** | |||||||
17782510-G-T | 15670630-G-T | ** | |||||||
9082358-C-A | 9244749-C-A | ** | |||||||
11031313-T-TTCCCC | ** | ||||||||
15264716-G-T | 13152806-G-T | ** | |||||||
17584159-G-A | 15472279-G-A | ** | |||||||
22520787-TCAA-T | 20358901-TCAA-T | ** | |||||||
9956355-G-A | 10118746-G-A | FGC74425 | ** | ||||||
11643658-G-A | FT161955 | ** | |||||||
23831281-GAC-G | 21669395-GAC-G | ** | |||||||
5189338-C-A | 5321297-C-A | ** | |||||||
10658546-T-C | ** | ||||||||
15532417-C-A | 13420537-C-A | ** | |||||||
10851022-A-T | ** | ||||||||
10801291-C-A | ** | ||||||||
11003737-C-T | ** | ||||||||
10912359-T-G | ** | ||||||||
10912365-C-G | ** | ||||||||
10912370-T-C | ** | ||||||||
10912371-T-C | ** | ||||||||
10912380-A-C | ** | ||||||||
23807442-A-T | 21645556-A-T | Y38170 | ** | ||||||
23819103-C-A | 21657217-C-A | ** | |||||||
28645316-C-A | 26499169-C-A | ** | |||||||
11034009-G-T | ** | ||||||||
19337659-A-T | 17225779-A-T | ** | |||||||
21884451-C-A | 19722565-C-A | ** | |||||||
13880290-C-A | 11759584-C-A | ** | |||||||
21505564-G-T | 19343678-G-T | ** | |||||||
18204983-T-A | 16093103-T-A | ** | |||||||
14501106-C-A | 12389311-C-A | ** | |||||||
7534675-T-G | 7666634-T-G | ** | |||||||
11643668-G-A | ** | ||||||||
10987838-C-T | ** | ||||||||
14184421-T-C | 12063715-T-C | ** | |||||||
26249047-T-A | 24102900-T-A | P1_Y1 | ** | ||||||
21219739-C-A | 19057853-C-A | ** | |||||||
19187421-C-T | 17075541-C-T | ** | |||||||
5937278-A-T | 6069237-A-T | ** | |||||||
10956554-C-A | ** | ||||||||
18215811-C-A | 16103931-C-A | ** | |||||||
11022906-C-CCGATT | ** | ||||||||
20326054-C-T | 18164168-C-T | P5_Dst | ** | ||||||
22868740-C-A | 20706854-C-A | ** | |||||||
13866016-A-G | 11745310-A-G | ** | |||||||
14557776-C-A | 12445977-C-A | ** | |||||||
28608543-C-A | 26462396-C-A | ** | |||||||
18949834-C-A | 16837954-C-A | ** | |||||||
6620700-C-A | 6752659-C-A | ** | |||||||
17143989-A-G | 15032109-A-G | ** | |||||||
10949977-C-A | ** | ||||||||
18891047-AT-A | 16779167-AT-A | 9×T | ** | ||||||
13216445-C-A | 11060769-C-A | ** | |||||||
10876785-G-T | ** | ||||||||
14463635-C-A | 12342908-C-A | ** | |||||||
14250448-A-T | 12129742-A-T | ** | |||||||
4665843-C-A | 4797802-C-A | ** | |||||||
27397008-G-T | 25250861-G-T | P1_g3 | ** | ||||||
22171496-G-T | 20009610-G-T | ** | |||||||
8389595-G-TT | 8521554-G-TT | ** | |||||||
23831293-C-T | 21669407-C-T | ** | |||||||
18288738-C-A | 16176858-C-A | P6_Prx | ** | ||||||
22775084-C-A | 20613198-C-A | ** | |||||||
17144069-C-T | 15032189-C-T | ** | |||||||
10980836-C-A | ** | ||||||||
8728250-C-A | 8860209-C-A | FT34010 | ** | ||||||
7061146-T-C | 7193105-T-C | ** | |||||||
21603998-C-A | 19442112-C-A | ** | |||||||
10986451-CACCTT-C | ** | ||||||||
7235900-A-T | 7367859-A-T | ** | |||||||
16705036-C-A | 14593156-C-A | ** | |||||||
13874605-C-A | 11753899-C-A | ** | |||||||
22132978-C-A | 19971092-C-A | ** | |||||||
10780613-A-T | ** | ||||||||
10949947-T-C | ** | ||||||||
13880916-C-A | 11760210-C-A | ** | |||||||
16848544-C-A | 14736664-C-A | ** | |||||||
15746356-C-A | 13634476-C-A | ** | |||||||
5456507-C-A | 5588466-C-A | ** | |||||||
13462258-C-A | 11306582-C-A | ** | |||||||
20440395-G-GTTA | 18278509-G-GTTA | P5_Dst | ** | ||||||
18266337-C-A | 16154457-C-A | ** | |||||||
19121764-C-A | 17009884-C-A | ** | |||||||
16196159-C-A | 14084279-C-A | ** | |||||||
9956349-G-A | 10118740-G-A | ** | |||||||
5336091-G-T | 5468050-G-T | ** | |||||||
2850998-C-A | 2982957-C-A | ** | |||||||
13472203-C-A | 11316527-C-A | ** | |||||||
11037174-A-C | ** | ||||||||
14241257-C-A | 12120551-C-A | ** | |||||||
16336051-C-A | 14224171-C-A | ** | |||||||
21974835-C-A | 19812949-C-A | ** | |||||||
23146000-C-A | 20984114-C-A | ** | |||||||
23421041-GA-G | 21259155-GA-G | ** | |||||||
11001588-A-G | ** | ||||||||
10037747-C-A | 10200138-C-A | ** | |||||||
14788805-C-A | 12676876-C-A | ** | |||||||
22951866-C-A | 20789980-C-A | ** | |||||||
17144018-C-T | 15032138-C-T | ** | |||||||
21888390-C-A | 19726504-C-A | ** | |||||||
7645507-C-A | 7777466-C-A | FT215574 | ** | ||||||
8902035-C-A | 9033994-C-A | ** | |||||||
14446592-C-A | 12325865-C-A | ** | |||||||
10658933-G-T | ** | ||||||||
15264726-G-A | 13152816-G-A | ** | |||||||
6792405-G-A | 6924364-G-A | FT123774 | ** | ||||||
23807436-C-T | 21645550-C-T | ** | |||||||
16351597-C-A | 14239717-C-A | ** | |||||||
21132764-C-A | 18970878-C-A | ** | |||||||
2651262-C-A | 2783221-C-A | ** | |||||||
2693301-C-A | 2825260-C-A | ** | |||||||
2790171-C-A | 2922130-C-A | ** | |||||||
2790255-T-A | 2922214-T-A | ** | |||||||
2790269-C-G | 2922228-C-G | ** | |||||||
2795114-T-C | 2927073-T-C | ** | |||||||
2824397-T-A | 2956356-T-A | ** | |||||||
2840046-T-G | 2972005-T-G | ** | |||||||
2933893-C-A | 3065852-C-A | ** | |||||||
3019472-GT-G | 3151431-GT-G | ** | |||||||
3019526-A-T | 3151485-A-T | ** | |||||||
3046455-T-C | 3178414-T-C | ** | |||||||
3084718-C-A | 3216677-C-A | ** | |||||||
3625771-C-G | 3757730-C-G | ** | |||||||
3834667-G-T | 3966626-G-T | ** | |||||||
3941360-AG-A | 4073319-AG-A | ** | |||||||
4049845-C-A | 4181804-C-A | ** | |||||||
4103136-T-C | 4235095-T-C | ** | |||||||
4106423-C-A | 4238382-C-A | ** | |||||||
4138541-T-C | 4270500-T-C | ** | |||||||
4335023-C-T | 4466982-C-T | ** | |||||||
4356911-T-C | 4488870-T-C | ** | |||||||
4357582-A-G | 4489541-A-G | ** | |||||||
4425951-G-A | 4557910-G-A | ** | |||||||
4439500-G-T | 4571459-G-T | ** | |||||||
4700913-C-A | 4832872-C-A | ** | |||||||
4747255-T-A | 4879214-T-A | ** | |||||||
4871906-G-T | 5003865-G-T | ** | |||||||
4884272-T-C | 5016231-T-C | ** | |||||||
4900924-A-G | 5032883-A-G | ** | |||||||
4992436-A-G | 5124395-A-G | ** | |||||||
5264219-C-T | 5396178-C-T | ** | |||||||
5698706-A-T | 5830665-A-T | ** | |||||||
5935761-GA-G | 6067720-GA-G | ** | |||||||
5976478-C-A | 6108437-C-A | ** | |||||||
5986583-G-T | 6118542-G-T | ** | |||||||
5986624-A-T | 6118583-A-T | ** | |||||||
6063374-A-G | 6195333-A-G | ** | |||||||
6064502-C-A | 6196461-C-A | ** | |||||||
6435230-T-A | 6567189-T-A | ** | |||||||
6475260-G-T | 6607219-G-T | ** | |||||||
6582370-C-A | 6714329-C-A | ** | |||||||
6582399-A-T | 6714358-A-T | ** | |||||||
6620733-C-A | 6752692-C-A | ** | |||||||
6699108-G-A | 6831067-G-A | FT184961 | ** | ||||||
6699115-ACTGG-A | 6831074-ACTGG-A | ** | |||||||
6775938-G-C | 6907897-G-C | ** | |||||||
6780890-AAAAAAAC-A | 6912849-AAAAAAAC-A | ** | |||||||
6786683-T-C | 6918642-T-C | ** | |||||||
6787088-G-T | 6919047-G-T | ** | |||||||
6881090-C-A | 7013049-C-A | ** | |||||||
6922592-C-A | 7054551-C-A | ** | |||||||
6930836-G-A | 7062795-G-A | ** | |||||||
7013337-T-C | 7145296-T-C | ** | |||||||
7132069-C-T | 7264028-C-T | ** | |||||||
7145030-A-C | 7276989-A-C | ** | |||||||
7154880-G-A | 7286839-G-A | FT167271 | ** | ||||||
7176047-C-A | 7308006-C-A | ** | |||||||
7214186-C-A | 7346145-C-A | ** | |||||||
7215244-C-A | 7347203-C-A | ** | |||||||
7231591-C-A | 7363550-C-A | ** | |||||||
7235891-C-T | 7367850-C-T | ** | |||||||
7235897-A-T | 7367856-A-T | ** | |||||||
7235904-C-T | 7367863-C-T | ** | |||||||
7310005-A-T | 7441964-A-T | ** | |||||||
7311548-C-T | 7443507-C-T | ** | |||||||
7363365-C-A | 7495324-C-A | ** | |||||||
7499806-T-C | 7631765-T-C | IR1_L | ** | ||||||
7590881-T-C | 7722840-T-C | ** | |||||||
7621947-A-G | 7753906-A-G | ** | |||||||
7733438-G-T | 7865397-G-T | ** | |||||||
7989302-C-A | 8121261-C-A | ** | |||||||
8154124-C-T | 8286083-C-T | ** | |||||||
8184714-A-G | 8316673-A-G | ** | |||||||
8671428-C-A | 8803387-C-A | ** | |||||||
8735010-C-T | 8866969-C-T | ** | |||||||
8748382-C-A | 8880341-C-A | ** | |||||||
8792970-C-T | 8924929-C-T | ** | |||||||
9111300-T-C | ** | ||||||||
9048167-G-T | 9210558-G-T | ** | |||||||
9048628-G-T | 9211019-G-T | ** | |||||||
9055491-T-C | 9217882-T-C | ** | |||||||
9184137-C-A | 9346528-C-A | ** | |||||||
9414586-G-T | 9576977-G-T | ** | |||||||
9421103-G-T | 9583494-G-T | ** | |||||||
9462312-C-A | 9624703-C-A | ** | |||||||
9703000-G-T | 9865391-G-T | IR3_Prx | ** | ||||||
9932091-A-G | 10094482-A-G | ** | |||||||
10073650-C-A | 10236041-C-A | ** | |||||||
10657167-ATCCAC-A | ** | ||||||||
10672723-T-C | ** | ||||||||
10685696-C-A | ** | ||||||||
10686768-T-C | ** | ||||||||
10694043-T-A | ** | ||||||||
10749176-C-A | ** | ||||||||
10755366-C-A | ** | ||||||||
10781114-C-A | ** | ||||||||
10789242-G-T | ** | ||||||||
10789804-T-C | ** | ||||||||
10791638-C-A | ** | ||||||||
10825653-GTTCCATTCCA-G | ** | ||||||||
10827804-C-A | ** | ||||||||
10828908-C-A | ** | ||||||||
10828938-C-A | ** | ||||||||
10831555-C-CA | ** | ||||||||
10831556-CA-C | ** | ||||||||
10899219-C-A | ** | ||||||||
10900086-C-A | ** | ||||||||
10925137-C-T | ** | ||||||||
10928876-T-C | ** | ||||||||
10948302-A-T | ** | ||||||||
10949964-C-T | ** | ||||||||
10949968-TC-T | ** | ||||||||
10949971-ACTAC-A | ** | ||||||||
10974183-T-A | ** | ||||||||
10974283-C-T | ** | ||||||||
10980793-C-A | ** | ||||||||
10986434-C-T | ** | ||||||||
10986441-T-G | ** | ||||||||
10986471-T-C | ** | ||||||||
10986472-T-G | ** | ||||||||
10986490-A-C | ** | ||||||||
11019172-T-C | ** | ||||||||
11021347-C-A | ** | ||||||||
13224620-A-G | 11068944-A-G | ** | |||||||
13225511-CA-C | 11069835-CA-C | 8×A | ** | ||||||
13226753-C-A | 11071077-C-A | ** | |||||||
13233487-A-G | 11077811-A-G | ** | |||||||
13252577-C-T | 11096901-C-T | ** | |||||||
13252586-GC-G | 11096910-GC-G | ** | |||||||
13278013-C-A | 11122337-C-A | ** | |||||||
13297839-C-A | 11142163-C-A | ** | |||||||
13326709-C-G | 11171033-C-G | ** | |||||||
13345540-G-T | 11189864-G-T | ** | |||||||
13457767-A-G | 11302091-A-G | ** | |||||||
13482349-G-T | 11326673-G-T | ** | |||||||
13482919-A-T | 11327243-A-T | ** | |||||||
13521165-C-A | 11365489-C-A | ** | |||||||
13550741-C-A | 11395065-C-A | ** | |||||||
13591724-A-G | 11436048-A-G | ** | |||||||
13597818-C-A | 11442142-C-A | ** | |||||||
13637418-T-C | 11481742-T-C | ** | |||||||
13800963-C-A | 11680257-C-A | ** | |||||||
13874196-C-A | 11753490-C-A | FTA30749 | ** | ||||||
13874864-C-A | 11754158-C-A | ** | |||||||
13884990-C-A | 11764284-C-A | ** | |||||||
13885384-C-T | 11764678-C-T | ** | |||||||
13899302-T-C | 11778596-T-C | ** | |||||||
13932803-A-T | 11812097-A-T | ** | |||||||
13934292-C-A | 11813586-C-A | ** | |||||||
13963801-C-T | 11843095-C-T | FT174985 | ** | ||||||
14042787-T-A | 11922081-T-A | ** | |||||||
14067335-C-A | 11946629-C-A | FT271903 | ** | ||||||
14069951-C-A | 11949245-C-A | ** | |||||||
14214839-C-A | 12094133-C-A | ** | |||||||
14220469-C-A | 12099763-C-A | FT5189 | ** | ||||||
14253304-C-A | 12132598-C-A | ** | |||||||
14311662-C-A | 12190956-C-A | ** | |||||||
14387853-C-A | 12267149-C-A | ** | |||||||
14452701-G-T | 12331974-G-T | ** | |||||||
14490907-C-A | 12370176-C-A | ** | |||||||
14515796-C-A | 12403997-C-A | ** | |||||||
14519501-A-T | 12407702-A-T | ** | |||||||
14574000-A-T | 12462200-A-T | ** | |||||||
14578501-A-C | 12466701-A-C | ** | |||||||
14620097-C-A | 12508295-C-A | ** | |||||||
14689041-C-A | 12577107-C-A | ** | |||||||
14700980-G-C | 12589046-G-C | ** | |||||||
14721688-G-A | 12609756-G-A | ** | |||||||
14788888-C-A | 12676959-C-A | ** | |||||||
14815631-G-T | 12703702-G-T | ** | |||||||
14932038-C-A | 12820103-C-A | ** | |||||||
14965369-G-C | 12853444-G-C | ** | |||||||
14992404-T-C | 12880489-T-C | ** | |||||||
15001464-C-A | 12889549-C-A | ** | |||||||
15106638-AGGT-A | 12994726-AGGT-A | ** | |||||||
15198871-C-A | 13086957-C-A | ** | |||||||
15305743-C-T | 13193842-C-T | ** | |||||||
15321387-C-A | 13209505-C-A | ** | |||||||
15322571-A-G | 13210689-A-G | FT84973 | ** | ||||||
15324086-T-G | 13212204-T-G | ** | |||||||
15333362-G-T | 13221480-G-T | ** | |||||||
15382982-C-A | 13271102-C-A | ** | |||||||
15399919-T-C | 13288039-T-C | ** | |||||||
15410846-G-T | 13298966-G-T | ** | |||||||
15456954-CTGTCTGGGTCAAACAATGGAACCCAACCACGTTAGGGCCTTTATGGGA-C | 13345074-CTGTCTGGGTCAAACAATGGAACCCAACCACGTTAGGGCCTTTATGGGA-C | ** | |||||||
15502155-G-GAGCATAAC | 13390275-G-GAGCATAAC | ** | |||||||
15502157-A-C | 13390277-A-C | ** | |||||||
15502160-A-GC | 13390280-A-GC | ** | |||||||
15502162-G-C | 13390282-G-C | ** | |||||||
15565400-T-A | 13453520-T-A | ** | |||||||
15712446-C-T | 13600566-C-T | ** | |||||||
15717700-T-A | 13605820-T-A | ** | |||||||
15741027-T-C | 13629147-T-C | ** | |||||||
15767127-C-A | 13655247-C-A | ** | |||||||
15926794-G-A | 13814914-G-A | ** | |||||||
15942924-T-C | 13831044-T-C | ** | |||||||
15975280-C-A | 13863400-C-A | ** | |||||||
15985516-G-A | 13873636-G-A | ** | |||||||
16045790-C-A | 13933910-C-A | ** | |||||||
16054304-A-G | 13942424-A-G | ** | |||||||
16075955-C-A | 13964075-C-A | ** | |||||||
16409046-A-T | 14297166-A-T | ** | |||||||
16417282-T-C | 14305402-T-C | ** | |||||||
16421006-C-A | 14309126-C-A | ** | |||||||
16429630-G-T | 14317750-G-T | ** | |||||||
16492490-CT-C | 14380610-CT-C | ** | |||||||
16516480-C-A | 14404600-C-A | ** | |||||||
16569877-A-G | 14457997-A-G | ** | |||||||
16703873-C-A | 14591993-C-A | ** | |||||||
16783347-G-A | 14671467-G-A | ** | |||||||
17081320-T-TA | 14969440-T-TA | ** | |||||||
17122302-C-A | 15010422-C-A | ** | |||||||
17144001-C-G | 15032121-C-G | ** | |||||||
17144023-C-T | 15032143-C-T | ** | |||||||
17144067-C-G | 15032187-C-G | ** | |||||||
17144071-G-A | 15032191-G-A | ** | |||||||
17277467-A-G | 15165587-A-G | ** | |||||||
17301213-T-A | 15189333-T-A | ** | |||||||
17374360-G-A | 15262480-G-A | ** | |||||||
17515492-C-A | 15403612-C-A | ** | |||||||
17569081-C-A | 15457201-C-A | ** | |||||||
17637769-G-A | 15525889-G-A | ** | |||||||
17770607-A-G | 15658727-A-G | ** | |||||||
17876284-C-A | 15764404-C-A | ** | |||||||
17876490-C-A | 15764610-C-A | ** | |||||||
17923101-C-A | 15811221-C-A | ** | |||||||
17946955-T-C | 15835075-T-C | ** | |||||||
18138185-T-A | 16026305-T-A | ** | |||||||
18159919-T-A | 16048039-T-A | ** | |||||||
18194172-TA-T | 16082292-TA-T | ** | |||||||
18215766-C-T | 16103886-C-T | ** | |||||||
18253143-T-C | 16141263-T-C | ** | |||||||
18386521-C-A | 16274641-C-A | P6_Gap | ** | ||||||
18573421-G-A | 16461541-G-A | ** | |||||||
18575242-A-T | 16463362-A-T | ** | |||||||
18716676-C-A | 16604796-C-A | ** | |||||||
18756067-C-A | 16644187-C-A | ** | |||||||
18779479-C-T | 16667599-C-T | ** | |||||||
18786323-T-A | 16674443-T-A | ** | |||||||
18849464-C-A | 16737584-C-A | ** | |||||||
18902943-C-A | 16791063-C-A | ** | |||||||
18905450-C-A | 16793570-C-A | ** | |||||||
18906327-C-A | 16794447-C-A | ** | |||||||
18985025-C-A | 16873145-C-A | ** | |||||||
19040717-T-A | 16928837-T-A | ** | |||||||
19206577-C-A | 17094697-C-A | ** | |||||||
19235128-G-A | 17123248-G-A | ** | |||||||
19246637-G-T | 17134757-G-T | ** | |||||||
19274811-T-A | 17162931-T-A | ** | |||||||
19302542-T-A | 17190662-T-A | ** | |||||||
19379736-C-A | 17267856-C-A | ** | |||||||
19407640-C-T | 17295760-C-T | ** | |||||||
19508263-C-A | 17396383-C-A | ** | |||||||
19522090-T-C | 17410210-T-C | ** | |||||||
19544595-C-A | 17432715-C-A | ** | |||||||
19609524-T-A | 17497644-T-A | P5_Prx | ** | ||||||
19878155-A-AT | 17766275-A-AT | P5_Prx | ** | ||||||
20712236-C-A | 18550350-C-A | P4_Prx | ** | ||||||
20775230-C-A | 18613344-C-A | P4_Prx | ** | ||||||
20824818-C-A | 18662932-C-A | P4_Gap | ** | ||||||
20951085-T-C | 18789199-T-C | P4_Dst | ** | ||||||
20951196-T-TC | 18789310-T-TC | P4_Dst | ** | ||||||
21156902-A-C | 18995016-A-C | ** | |||||||
21195803-C-A | 19033917-C-A | ** | |||||||
21244196-C-A | 19082310-C-A | ** | |||||||
21297543-A-T | 19135657-A-T | ** | |||||||
21436647-C-A | 19274761-C-A | ** | |||||||
21544880-C-A | 19382994-C-A | ** | |||||||
21617753-T-A | 19455867-T-A | ** | |||||||
21813886-C-A | 19652000-C-A | ** | |||||||
21818907-G-C | 19657021-G-C | ** | |||||||
21883446-G-T | 19721560-G-T | ** | |||||||
22089988-G-T | 19928102-G-T | ** | |||||||
22113530-C-A | 19951644-C-A | ** | |||||||
22171485-T-A | 20009599-T-A | ** | |||||||
22171488-C-G | 20009602-C-G | ** | |||||||
22171500-C-T | 20009614-C-T | ** | |||||||
22208994-A-T | 20047108-A-T | ** | |||||||
22263888-A-G | 20102002-A-G | DYZ19 | ** | ||||||
22548415-C-A | 20386529-C-A | ** | |||||||
22615532-C-A | 20453646-C-A | ** | |||||||
22801873-C-A | 20639987-C-A | ** | |||||||
23066953-A-T | 20905067-A-T | ** | |||||||
23364307-T-C | 21202421-T-C | ** | |||||||
23391518-A-C | 21229632-A-C | ** | |||||||
23442074-G-T | 21280188-G-T | ** | |||||||
23545048-C-A | 21383162-C-A | ** | |||||||
23801628-G-T | 21639742-G-T | ** | |||||||
23837102-A-G | 21675216-A-G | ** | |||||||
24363919-C-A | 22217772-C-A | ** | |||||||
24407144-C-A | 22260997-C-A | ** | |||||||
24446726-G-C | 22300579-G-C | ** | |||||||
24447002-C-A | 22300855-C-A | ** | |||||||
25524728-A-AT | 23378581-A-AT | P1_gr1 | ** | ||||||
27447483-TG-T | 25301336-TG-T | P1_Y2 | ** | ||||||
27447520-CAG-C | 25301373-CAG-C | P1_Y2 | ** | ||||||
27690708-T-C | 25544561-T-C | P1_Y2 | ** | ||||||
28478436-A-G | 26332289-A-G | ** | |||||||
28544397-G-A | 26398250-G-A | ** | |||||||
28544889-T-A | 26398742-T-A | ** | |||||||
28649306-G-T | 26503159-G-T | ** | |||||||
28656922-C-A | 26510775-C-A | ** | |||||||
28698004-C-A | 26551857-C-A | ** | |||||||
28774407-C-A | 26628260-C-A | ** | |||||||
56847089-T-C | ** | ||||||||
56847183-G-A | ** | ||||||||
24220-G-A | ** | ||||||||
28787316-A-G | 26641169-A-G | *** | |||||||
9944121-A-T | 10106512-A-T | *** | |||||||
23197360-CAAAAA-C | 21035474-CAAAAA-C | 17×A | *** | ||||||
13799891-A-G | 11679185-A-G | *** | |||||||
26314758-G-A | 24168611-G-A | FGC29280 | FGC29279 | P1_Y1 | *** | ||||
19113763-C-T | 17001883-C-T | *** | |||||||
8994663-ACTG-A | 9157054-ACTG-A | 7×CTG | *** | ||||||
22023254-A-G | 19861368-A-G | *** | |||||||
58848117-G-C | 56742754-C-G | *** | |||||||
4064008-C-A | 4195967-C-A | *** | |||||||
13799875-C-A | 11679169-C-A | *** | |||||||
13799883-A-G | 11679177-A-G | *** | |||||||
13810924-G-A | 11690218-G-A | *** | |||||||
13838967-A-C | 11718261-A-C | *** | |||||||
8874970-CTTTT-C | 9006929-CTTTT-C | 17×T | *** | ||||||
24184555-C-T | 22038408-C-T | P3_b1 | *** | ||||||
24917369-T-C | 22771222-T-C | g1 | *** | ||||||
10973967-C-CC,CT | *** | ||||||||
21617775-T-A | 19455889-T-A | *** | |||||||
10673952-C-T | *** | ||||||||
13253991-T-C | 11098315-T-C | *** | |||||||
10673960-T-C | *** | ||||||||
3815175-G-T | 3947134-G-T | *** | |||||||
4557449-C-A | 4689408-C-A | *** | |||||||
56830050-C-A | *** | ||||||||
13456311-T-C | 11300635-T-C | *** | |||||||
10677466-C-A | *** | ||||||||
2960062-CAAAAA-C | 3092021-CAAAAA-C | 17×A | *** | ||||||
22868274-G-A | 20706388-G-A | *** | |||||||
14757478-C-A | 12645547-C-A | *** | |||||||
23098815-TCAAA-T | 20936929-TCAAA-T | *** | |||||||
16427494-C-A | 14315614-C-A | *** | |||||||
8879012-G-T | 9010971-G-T | *** | |||||||
16628658-C-A | 14516778-C-A | *** | |||||||
15330794-C-A | 13218912-C-A | *** | |||||||
2860480-A-G | 2992439-A-G | *** | |||||||
10682499-T-A | *** | ||||||||
13805011-C-A | 11684305-C-A | *** | |||||||
8333666-CTT-C | 8465625-CTT-C | *** | |||||||
8333669-CT-C | 8465628-CT-C | *** | |||||||
23837550-G-T | 21675664-G-T | *** | |||||||
21505554-C-T | 19343668-C-T | *** | |||||||
2686434-C-A | 2818393-C-A | *** | |||||||
2707994-G-TT | 2839953-G-TT | *** | |||||||
2740573-GCCCTCATT-G | 2872532-GCCCTCATT-G | *** | |||||||
4357652-C-T | 4489611-C-T | *** | |||||||
4357662-A-G | 4489621-A-G | *** | |||||||
4357677-G-A | 4489636-G-A | *** | |||||||
5242549-C-A | 5374508-C-A | *** | |||||||
6213854-T-A | 6345813-T-A | IR3_Dst | *** | ||||||
7195307-CAAAAA-C,CAAAAAA | 7327266-CAAAAA-C,CAAAAAA | 16×A | *** | ||||||
7206826-G-T | 7338785-G-T | *** | |||||||
7343440-G-T | 7475399-G-T | *** | |||||||
7970470-G-A | 8102429-G-A | *** | |||||||
8188504-C-T | 8320463-C-T | *** | |||||||
8398840-CAAAAA-C,CAAAA | 8530799-CAAAAA-C,CAAAA | 17×A | *** | ||||||
8422515-C-A | 8554474-C-A | *** | |||||||
8499433-G-A | 8631392-G-A | *** | |||||||
9354042-C-A | 9516433-C-A | *** | |||||||
9498810-A-G | 9661201-A-G | *** | |||||||
9855913-C-A | 10018304-C-A | *** | |||||||
9874968-C-A | 10037359-C-A | *** | |||||||
9987566-T-C | 10149957-T-C | *** | |||||||
10035354-A-T | 10197745-A-T | *** | |||||||
10677181-C-CTCTT | *** | ||||||||
10780802-C-A | *** | ||||||||
13253498-C-A | 11097822-C-A | *** | |||||||
13258827-C-A | 11103151-C-A | *** | |||||||
13473420-T-C | 11317744-T-C | *** | |||||||
13489677-C-A | 11334001-C-A | *** | |||||||
13571260-G-T | 11415584-G-T | *** | |||||||
13585401-C-A | 11429725-C-A | *** | |||||||
13718731-C-A | 11563055-C-A | *** | |||||||
11643299-C-A | *** | ||||||||
13821579-C-A | 11700873-C-A | *** | |||||||
14194832-G-T | 12074126-G-T | *** | |||||||
14338857-C-CT | 12218152-C-CT | 8×T | *** | ||||||
14366532-G-T | 12245827-G-T | *** | |||||||
14816916-T-C | 12704987-T-C | *** | |||||||
15308420-C-A | 13196522-C-A | *** | |||||||
16213673-C-A | 14101793-C-A | *** | |||||||
16297639-CA-C | 14185759-CA-C | *** | |||||||
16749741-TG-G,T | 14637861-TG-G,T | *** | |||||||
16909220-A-C | 14797340-A-C | *** | |||||||
16952434-C-A | 14840554-C-A | *** | |||||||
16999125-T-A | 14887245-T-A | *** | |||||||
17399220-C-A | 15287340-C-A | *** | |||||||
17664853-T-C | 15552973-T-C | *** | |||||||
19106922-C-A | 16995042-C-A | *** | |||||||
19156202-A-G | 17044322-A-G | *** | |||||||
19231490-C-A | 17119610-C-A | *** | |||||||
19402742-C-A | 17290862-C-A | *** | |||||||
19444392-C-A | 17332512-C-A | *** | |||||||
21100797-G-T | 18938911-G-T | *** | |||||||
21617773-C-A | 19455887-C-A | *** | |||||||
21993734-C-A | 19831848-C-A | *** | |||||||
22207181-C-A | 20045295-C-A | *** | |||||||
22218874-C-A | 20056988-C-A | DYZ19 | *** | ||||||
22660425-C-A | 20498539-C-A | *** | |||||||
23006840-T-C | 20844954-T-C | *** | |||||||
23061932-C-A | 20900046-C-A | *** | |||||||
23282124-C-A | 21120238-C-A | *** | |||||||
23342052-G-T | 21180166-G-T | *** | |||||||
23870912-G-T | 21709026-G-T | *** | |||||||
24415843-C-A | 22269696-C-A | *** | |||||||
24504664-A-G | 22358517-A-G | *** | |||||||
28787287-T-A | 26641140-T-A | *** | |||||||
28787314-G-T | 26641167-G-T | *** | |||||||
56830766-A-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.