Hucks
FTDNA: N76250, BigY2: N76250Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA N76250 | BigY2 N76250 |
---|---|---|---|---|---|---|---|---|---|
14102271-A-G | 11981565-A-G | FT272375 | Y | Y | A* | ||||
6309260-G-T | 6441219-G-T | IR3_Dst | *** | A* | |||||
18288898-T-C | 16177018-T-C | P6_Prx | *** | A* | |||||
19789086-G-T | 17677206-G-T | P5_Prx | *** | A* | |||||
22234181-A-T | 20072295-A-T | DYZ19 | *** | A* | |||||
24290261-A-G | 22144114-A-G | P3_t1 | *** | A* | |||||
24294649-C-A | 22148502-C-A | P3_t1 | *** | A* | |||||
25912331-C-A | 23766184-C-A | P1_Y1 | *** | A* | |||||
25958476-T-G | 23812329-T-G | P1_Y1 | *** | A* | |||||
26407769-G-T | 24261622-G-T | P1_Y1 | *** | A* | |||||
13687596-G-C | 11531920-G-C | DYZ17 | A* | ||||||
28816559-G-A | 26670412-G-A | A* | |||||||
25954080-T-TTTTCTTTC | 23807933-T-TTTTCTTTC | P1_Y1 | 16×TTTC | *** | + | ||||
25931556-AAAGGAAGG-A | 23785409-AAAGGAAGG-A | P1_Y1 | 9×AAGG | + | |||||
18935671-G-A | 16823791-G-A | BY124911 | Y | Y | + | + | |||
22463026-G-A | 20301140-G-A | b38:8377500-T-C | BY16614 | DYZ19 | + | + | |||
2903835-CA-C | 3035794-CA-C | + | + | ||||||
3162216-C-G | 3294175-C-G | BY57478 | + | + | |||||
6844108-G-A | 6976067-G-A | Y | Y | + | ** | ||||
7417856-G-A | 7549815-G-A | Y13673 | Y | Y | + | + | |||
7729550-G-A | 7861509-G-A | BY67167 | Y | Y | + | + | |||
7790577-T-C | 7922536-T-C | BY67654 | Y | Y | + | + | |||
7865526-G-A | 7997485-G-A | BY68316 | Y | Y | + | + | |||
8583383-C-T | 8715342-C-T | BY74244 | Y | Y | + | + | |||
9171152-G-C | 9333543-G-C | BY78783 | Y | ** | + | ||||
13818508-C-G | 11697802-C-G | BY90471 | DYZ17 | + | + | ||||
13827529-A-C | 11706823-A-C | BY90773 | DYZ17 | + | + | ||||
15642506-T-C | 13530626-T-C | BY103048 | Y | + | + | ||||
15739503-G-T | 13627623-G-T | BY103748 | Y | Y | + | + | |||
16436943-G-C | 14325063-G-C | BY107768 | Y | Y | + | + | |||
17133607-T-C | 15021727-T-C | BY112544 | Y | Y | + | + | |||
17352572-G-A | 15240692-G-A | BY114099 | Y | Y | + | + | |||
17719312-G-T | 15607432-G-T | BY116918 | Y | Y | + | + | |||
19061483-CAGG-C | 16949603-CAGG-C | + | + | ||||||
21869577-C-T | 19707691-C-T | BY136055 | Y | Y | + | + | |||
22092388-G-C | 19930502-G-C | BY137561 | Y | Y | + | + | |||
22118216-G-A | 19956330-G-A | BY137767 | Y | Y | + | + | |||
22868125-A-G | 20706239-A-G | BY44146 | Y | Y | + | + | |||
23116049-T-A | 20954163-T-A | BY143042 | Y | Y | + | + | |||
23121732-C-T | 20959846-C-T | BY143119 | Y | Y | + | + | |||
23194693-A-C | 21032807-A-C | BY143722 | Y | + | + | ||||
23281461-C-T | 21119575-C-T | BY44182 | Y | Y | + | + | |||
23295494-C-T | 21133608-C-T | Y | Y | + | + | ||||
24376884-C-A | 22230737-C-A | BY149443 | Y | + | + | ||||
24465953-C-T | 22319806-C-T | BY150160 | Y | + | + | ||||
7243-A-C | + | ||||||||
13538-G-T | + | ||||||||
8801381-G-GGAA | 8933340-G-GGAA | 10×GAA | *** | * | |||||
22231174-T-C | 20069288-T-C | DYZ19 | *** | * | |||||
17597183-G-T | 15485303-G-T | ** | |||||||
7306539-G-C | 7438498-G-C | FGC34 CTS1274 | ** | ** | |||||
7256093-G-A | 7388052-G-A | M12033 | 18×A | ** | |||||
19187413-TGCAC-T | 17075533-TGCAC-T | ** | |||||||
14938628-TG-T | 12826703-TG-T | ** | |||||||
15951998-G-A | 13840118-G-A | Z12456 | ** | ||||||
15984461-G-T | 13872581-G-T | S7280 | Y4117 FGC21835 Z17510 | ** | |||||
19013354-G-C | 16901474-G-C | Z27233 | ** | ||||||
59008693-C-T | 56862546-C-T | ** | |||||||
14339089-G-T | 12218384-G-T | ** | |||||||
2783642-GAAA-G | 2915601-GAAA-G | 15×A | ** | ||||||
25995548-G-A | 23849401-G-A | P1_Y1 | ** | ||||||
22230694-T-A | 20068808-T-A | BY189601 | DYZ19 | ** | |||||
13965268-TCAAA-T | 11844562-TCAAA-T | ** | |||||||
9371553-C-T | 9533944-C-T | ** | |||||||
26248104-G-A | 24101957-G-A | P1_Y1 | ** | ||||||
7195253-T-G | 7327212-T-G | ** | |||||||
13463950-C-A | 11308274-C-A | ** | |||||||
25899705-T-G | 23753558-T-G | P1_Y1 | ** | ||||||
26415701-G-A | 24269554-G-A | P1_Y1 | ** | ||||||
8333626-A-C | 8465585-A-C | FT426412 | 25×CTT | ** | |||||
18367671-G-T | 16255791-G-T | FTB39463 | P6_Prx | ** | |||||
22425596-C-T | 20263710-C-T | DYZ19 | *** | ** | |||||
22468546-C-A | 20306660-C-A | DYZ19 | *** | ** | |||||
10046072-G-GAT | 10208463-G-GAT | 8×AT | ** | ||||||
10770696-T-A | ** | ||||||||
11674564-CAATGG-C | DYZ17 | ** | |||||||
10768084-T-C | ** | ||||||||
10805357-T-C | ** | ||||||||
10805374-A-C | ** | ||||||||
10805392-C-T | ** | ||||||||
10805406-A-C | ** | ||||||||
19677905-C-CA | 17566025-C-CA | P5_Prx | ** | ||||||
7269673-A-G | 7401632-A-G | ** | |||||||
20434791-T-A | 18272905-T-A | BY212174 | P5_Dst | ** | |||||
10889563-A-T | ** | ||||||||
10799599-C-G | ** | ||||||||
10799602-T-TTGGAA | ** | ||||||||
4703124-C-A | 4835083-C-A | ** | |||||||
14784732-G-T | 12672802-G-T | ** | |||||||
16531073-G-A | 14419193-G-A | ** | |||||||
25246610-A-T | 23100463-A-T | P2_r1 | ** | ||||||
6347574-G-T | 6479533-G-T | ** | |||||||
6775420-CAAA-C | 6907379-CAAA-C | 12×A | ** | ||||||
8776590-G-T | 8908549-G-T | ** | |||||||
21318470-T-C | 19156584-T-C | ** | |||||||
27546773-G-T | 25400626-G-T | P1_Y2 | ** | ||||||
26415697-G-A | 24269550-G-A | P1_Y1 | ** | ||||||
6694217-C-A | 6826176-C-A | ** | |||||||
8776582-C-T | 8908541-C-T | ** | |||||||
10765531-T-C | ** | ||||||||
10765532-CT-C | ** | ||||||||
14235871-GA-G | 12115165-GA-G | 10×A | ** | ||||||
11024739-G-C | ** | ||||||||
19271583-T-G | 17159703-T-G | ** | |||||||
14784726-G-T | 12672796-G-T | ** | |||||||
13474849-C-A | 11319173-C-A | ** | |||||||
26153993-G-T | 24007846-G-T | P1_Y1 | ** | ||||||
17633852-CAAAA-C | 15521972-CAAAA-C | 13×A | ** | ||||||
27967308-G-A | 25821161-G-A | P1_Y2 | ** | ||||||
22949877-A-T | 20787991-A-T | ** | |||||||
22949878-C-T | 20787992-C-T | 23×T | ** | ||||||
10813064-C-T | ** | ||||||||
15677922-T-C | 13566042-T-C | ** | |||||||
16962857-C-A | 14850977-C-A | ** | |||||||
13483266-T-G | 11327590-T-G | ** | |||||||
13483275-A-T | 11327599-A-T | ** | |||||||
21175649-T-A | 19013763-T-A | ** | |||||||
23801617-C-A | 21639731-C-A | ** | |||||||
9371546-G-A | 9533937-G-A | ** | |||||||
2665861-C-A | 2797820-C-A | ** | |||||||
18518317-A-T | 16406437-A-T | P6_Dst | ** | ||||||
6293388-G-T | 6425347-G-T | IR3_Dst | ** | ||||||
14473758-G-A | 12353027-G-A | ** | |||||||
24235447-G-C | 22089300-G-C | P3_b1 | ** | ||||||
7106287-C-A | 7238246-C-A | ** | |||||||
7243136-C-A | 7375095-C-A | ** | |||||||
10937729-C-G | ** | ||||||||
10825225-C-A | BY27040 | ** | |||||||
16531082-T-A | 14419202-T-A | ** | |||||||
10818728-C-T | ** | ||||||||
10976922-C-G | ** | ||||||||
10976930-T-A | ** | ||||||||
7255019-C-A | 7386978-C-A | ** | |||||||
28465847-C-A | 26319700-C-A | ** | |||||||
28781363-C-A | 26635216-C-A | ** | |||||||
28768681-C-A | 26622534-C-A | ** | |||||||
19720746-A-C | 17608866-A-C | P5_Prx | ** | ||||||
10889560-T-C | ** | ||||||||
18825678-C-A | 16713798-C-A | ** | |||||||
10748250-ACCATT-A | ** | ||||||||
10654471-C-A | ** | ||||||||
8379583-G-C | 8511542-G-C | ** | |||||||
56857603-T-TAAAA | 11×A | ** | |||||||
25995545-A-T | 23849398-A-T | P1_Y1 | ** | ||||||
10693335-C-A | ** | ||||||||
7391791-C-A | 7523750-C-A | ** | |||||||
23034352-G-A | 20872466-G-A | FTB20995 | ** | ||||||
6756904-G-T | 6888863-G-T | ** | |||||||
18518307-C-T | 16406427-C-T | P6_Dst | ** | ||||||
7048031-C-A | 7179990-C-A | ** | |||||||
2817121-C-A | 2949080-C-A | ** | |||||||
19271573-T-A | 17159693-T-A | ** | |||||||
10964729-A-C | ** | ||||||||
2888869-TCAA-T | 3020828-TCAA-T | ** | |||||||
7416647-C-A | 7548606-C-A | ** | |||||||
7166590-G-A | 7298549-G-A | ** | |||||||
10967569-A-T | ** | ||||||||
14035235-C-A | 11914529-C-A | ** | |||||||
15057272-C-A | 12945364-C-A | ** | |||||||
56848787-C-T | ** | ||||||||
3800092-AACAC-A | 3932051-AACAC-A | 17×AC | ** | ||||||
10972249-C-A | ** | ||||||||
8776571-TA-T | 8908530-TA-T | ** | |||||||
10824171-C-G | ** | ||||||||
10824222-AGTTCC-T | ** | ||||||||
17597188-C-T | 15485308-C-T | ** | |||||||
10937715-C-T | FT437315 | ** | |||||||
6510561-C-A | 6642520-C-A | ** | |||||||
14588991-G-T | 12477191-G-T | ** | |||||||
22041575-C-A | 19879689-C-A | ** | |||||||
6464866-C-A | 6596825-C-A | ** | |||||||
21459990-C-A | 19298104-C-A | ** | |||||||
17517126-C-A | 15405246-C-A | ** | |||||||
18447574-C-A | 16335694-C-A | P6_Dst | ** | ||||||
7166587-C-A | 7298546-C-A | ** | |||||||
15928514-A-T | 13816634-A-T | ** | |||||||
23034353-G-C | 20872467-G-C | ** | |||||||
13992190-T-C | 11871484-T-C | ** | |||||||
15168464-C-A | 13056550-C-A | ** | |||||||
10912011-G-A | ** | ||||||||
14413233-AC-A | 12292530-AC-A | ** | |||||||
14582222-C-A | 12470422-C-A | ** | |||||||
10824186-C-T | ** | ||||||||
15653378-C-A | 13541498-C-A | ** | |||||||
23341214-G-T | 21179328-G-T | ** | |||||||
13705565-C-A | 11549889-C-A | DYZ17 | ** | ||||||
10768110-C-T | ** | ||||||||
10768119-T-C | ** | ||||||||
8728250-C-A | 8860209-C-A | FT34010 | ** | ||||||
10824146-C-G | ** | ||||||||
10818717-A-G | ** | ||||||||
10818723-C-T | ** | ||||||||
56847562-C-A | ** | ||||||||
8230280-C-A | 8362239-C-A | ** | |||||||
21164702-C-A | 19002816-C-A | ** | |||||||
15657125-TA-T | 13545245-TA-T | 8×A | ** | ||||||
10864463-CCATTT-C | ** | ||||||||
2665510-A-G | 2797469-A-G | ** | |||||||
2702239-C-A | 2834198-C-A | ** | |||||||
2763695-G-A | 2895654-G-A | ** | |||||||
2767987-G-T | 2899946-G-T | ** | |||||||
2852431-C-A | 2984390-C-A | ** | |||||||
3156517-G-T | 3288476-G-T | ** | |||||||
3158270-G-T | 3290229-G-T | ** | |||||||
3166399-C-A | 3298358-C-A | ** | |||||||
3202726-A-T | 3334685-A-T | ** | |||||||
3287153-C-A | 3419112-C-A | ** | |||||||
3329227-C-A | 3461186-C-A | ** | |||||||
3337312-G-A | 3469271-G-A | ** | |||||||
3364746-C-A | 3496705-C-A | ** | |||||||
3732209-A-T | 3864168-A-T | ** | |||||||
3759161-C-G | 3891120-C-G | ** | |||||||
3768048-G-T | 3900007-G-T | ** | |||||||
3777186-C-T | 3909145-C-T | FT254095 | ** | ||||||
3817929-C-A | 3949888-C-A | ** | |||||||
3847345-C-A | 3979304-C-A | ** | |||||||
3948574-G-T | 4080533-G-T | ** | |||||||
3952046-G-T | 4084005-G-T | ** | |||||||
4002252-C-A | 4134211-C-A | ** | |||||||
4063625-G-T | 4195584-G-T | ** | |||||||
4144186-C-A | 4276145-C-A | ** | |||||||
4187414-G-T | 4319373-G-T | ** | |||||||
4356979-C-A | 4488938-C-A | ** | |||||||
4357484-C-A | 4489443-C-A | ** | |||||||
4370703-G-T | 4502662-G-T | ** | |||||||
4401979-G-A | 4533938-G-A | ** | |||||||
4490031-C-T | 4621990-C-T | ** | |||||||
4531888-C-A | 4663847-C-A | ** | |||||||
4707202-C-A | 4839161-C-A | ** | |||||||
5000579-T-C | 5132538-T-C | ** | |||||||
5035508-G-T | 5167467-G-T | ** | |||||||
5060277-T-C | 5192236-T-C | ** | |||||||
5110020-G-A | 5241979-G-A | ** | |||||||
5110091-G-T | 5242050-G-T | ** | |||||||
5116431-G-A | 5248390-G-A | FTA54559 | ** | ||||||
5217760-G-T | 5349719-G-T | ** | |||||||
5264600-G-A | 5396559-G-A | ** | |||||||
5313469-C-A | 5445428-C-A | ** | |||||||
5398546-A-AT | 5530505-A-AT | 9×T | ** | ||||||
5449867-A-T | 5581826-A-T | ** | |||||||
5580795-G-T | 5712754-G-T | ** | |||||||
5596753-G-A | 5728712-G-A | ** | |||||||
5650464-C-A | 5782423-C-A | ** | |||||||
5713046-C-A | 5845005-C-A | ** | |||||||
5760246-A-C | 5892205-A-C | ** | |||||||
5760323-G-T | 5892282-G-T | ** | |||||||
5760361-A-C | 5892320-A-C | ** | |||||||
5826851-C-A | 5958810-C-A | ** | |||||||
5839419-ATT-A | 5971378-ATT-A | ** | |||||||
5911458-A-G | 6043417-A-G | ** | |||||||
5948992-G-A | 6080951-G-A | ** | |||||||
5948996-T-A | 6080955-T-A | ** | |||||||
6060761-C-A | 6192720-C-A | ** | |||||||
6144859-T-A | 6276818-T-A | IR3_Dst | ** | ||||||
6222966-T-C | 6354925-T-C | IR3_Dst | ** | ||||||
6329467-C-A | 6461426-C-A | IR3_Dst | ** | ||||||
6359132-A-G | 6491091-A-G | ** | |||||||
6384250-A-G | 6516209-A-G | ** | |||||||
6384259-T-A | 6516218-T-A | ** | |||||||
6384261-T-TA | 6516220-T-TA | ** | |||||||
6407816-G-T | 6539775-G-T | ** | |||||||
6510569-T-C | 6642528-T-C | ** | |||||||
6648707-C-A | 6780666-C-A | ** | |||||||
6784332-G-A | 6916291-G-A | ** | |||||||
6868815-A-G | 7000774-A-G | ** | |||||||
6910558-T-C | 7042517-T-C | ** | |||||||
6967853-C-A | 7099812-C-A | ** | |||||||
7101115-C-A | 7233074-C-A | ** | |||||||
7116780-C-A | 7248739-C-A | ** | |||||||
7139312-C-A | 7271271-C-A | ** | |||||||
7199548-C-A | 7331507-C-A | ** | |||||||
7221713-A-G | 7353672-A-G | ** | |||||||
7235897-A-G | 7367856-A-G | ** | |||||||
7252196-C-A | 7384155-C-A | ** | |||||||
7305617-C-A | 7437576-C-A | ** | |||||||
7319354-T-C | 7451313-T-C | ** | |||||||
7321490-C-G | 7453449-C-G | ** | |||||||
7325676-C-A | 7457635-C-A | ** | |||||||
7330223-C-A | 7462182-C-A | ** | |||||||
7390601-A-G | 7522560-A-G | ** | |||||||
7409411-G-A | 7541370-G-A | ** | |||||||
7409792-T-C | 7541751-T-C | ** | |||||||
7462617-C-A | 7594576-C-A | IR1_L | ** | ||||||
7615231-G-T | 7747190-G-T | ** | |||||||
7640955-C-A | 7772914-C-A | ** | |||||||
7695830-C-A | 7827789-C-A | ** | |||||||
7776480-C-A | 7908439-C-A | ** | |||||||
7867030-C-A | 7998989-C-A | ** | |||||||
8030030-TAAAAAAA-T | 8161989-TAAAAAAA-T | 26×A | ** | ||||||
8072278-A-T | 8204237-A-T | ** | |||||||
8075306-G-T | 8207265-G-T | ** | |||||||
8353295-T-C | 8485254-T-C | ** | |||||||
8746325-T-A | 8878284-T-A | ** | |||||||
9057196-A-G | ** | ||||||||
9118321-G-T | ** | ||||||||
8987728-A-T | 9150119-A-T | ** | |||||||
9063214-G-T | 9225605-G-T | ** | |||||||
9304920-C-A | 9467311-C-A | ** | |||||||
9304924-A-G | 9467315-A-G | ** | |||||||
9418963-A-C | 9581354-A-C | ** | |||||||
9424598-G-A | 9586989-G-A | 16×A | ** | ||||||
9442699-A-G | 9605090-A-G | ** | |||||||
9446295-C-A | 9608686-C-A | ** | |||||||
9465242-C-A | 9627633-C-A | ** | |||||||
9511741-C-A | 9674132-C-A | ** | |||||||
9564509-C-CTA | 9726900-C-CTA | IR3_Prx | 9×TG | ** | |||||
9670001-T-C | 9832392-T-C | IR3_Prx | ** | ||||||
9804899-A-T | 9967290-A-T | ** | |||||||
9807893-C-A | 9970284-C-A | ** | |||||||
9962092-C-A | 10124483-C-A | ** | |||||||
9996130-A-G | 10158521-A-G | ** | |||||||
10003140-C-A | 10165531-C-A | ** | |||||||
10013846-C-A | 10176237-C-A | ** | |||||||
10023018-C-A | 10185409-C-A | ** | |||||||
10023084-T-G | 10185475-T-G | ** | |||||||
10028431-G-A | 10190822-G-A | ** | |||||||
10629036-C-T | ** | ||||||||
10629043-A-C | ** | ||||||||
10629057-C-A | ** | ||||||||
10629098-A-ACTCAATTCCT | ** | ||||||||
10629108-A-ATTCT | ** | ||||||||
10653107-CCG-C | ** | ||||||||
10657095-C-A | ** | ||||||||
10658721-A-T | ** | ||||||||
10665694-T-C | ** | ||||||||
10667788-T-C | ** | ||||||||
10668274-C-A | ** | ||||||||
10688572-C-A | ** | ||||||||
10747061-G-T | ** | ||||||||
10748015-C-CA | ** | ||||||||
10748016-C-CATTG | ** | ||||||||
10757411-A-C | ** | ||||||||
10757414-C-A | ** | ||||||||
10764346-C-A | ** | ||||||||
10768075-C-T | ** | ||||||||
10768076-C-A | ** | ||||||||
10768144-T-G | ** | ||||||||
10771694-C-A | ** | ||||||||
10787655-G-T | ** | ||||||||
10790522-C-A | ** | ||||||||
10796442-A-C | ** | ||||||||
10796508-T-C | ** | ||||||||
10801427-A-G | ** | ||||||||
10805859-T-A | ** | ||||||||
10824138-A-C | ** | ||||||||
10824139-T-G | ** | ||||||||
10824208-ATTCCT-A | ** | ||||||||
10838141-G-T | ** | ||||||||
10845288-C-A | ** | ||||||||
10845792-T-C | ** | ||||||||
10873372-C-A | ** | ||||||||
10882875-C-A | ** | ||||||||
10882935-C-G | ** | ||||||||
10887078-C-A | ** | ||||||||
10889652-C-T | ** | ||||||||
10899318-C-A | ** | ||||||||
10901429-C-A | ** | ||||||||
10919802-C-A | ** | ||||||||
10928851-C-T | ** | ||||||||
10929428-A-T | ** | ||||||||
10937692-T-A | ** | ||||||||
10937695-C-A | ** | ||||||||
10937727-C-A | ** | ||||||||
10937746-A-ATTCATGTC | ** | ||||||||
10937749-TTAC-T | ** | ||||||||
10937763-T-TC | ** | ||||||||
10937764-T-TG | ** | ||||||||
10937766-T-TCCC | ** | ||||||||
10937779-C-A | ** | ||||||||
10937802-T-C | ** | ||||||||
10940181-C-A | ** | ||||||||
10947923-C-A | FT437764 | ** | |||||||
10955308-T-A | ** | ||||||||
10967869-A-G | ** | ||||||||
10979618-C-A | ** | ||||||||
10988306-C-A | ** | ||||||||
11009181-A-G | ** | ||||||||
11009799-C-T | ** | ||||||||
11017468-C-A | ** | ||||||||
11024740-T-C | ** | ||||||||
11031879-C-A | ** | ||||||||
13214015-C-A | 11058339-C-A | ** | |||||||
13238389-T-C | 11082713-T-C | ** | |||||||
13238397-T-G | 11082721-T-G | ** | |||||||
13238404-G-A | 11082728-G-A | FT220076 | ** | ||||||
13238406-T-C | 11082730-T-C | ** | |||||||
13238411-G-T | 11082735-G-T | ** | |||||||
13313697-C-A | 11158021-C-A | ** | |||||||
13486838-C-A | 11331162-C-A | ** | |||||||
13571653-C-G | 11415977-C-G | ** | |||||||
13626168-G-T | 11470492-G-T | ** | |||||||
13643373-C-T | 11487697-C-T | ** | |||||||
13701302-T-A | 11545626-T-A | DYZ17 | ** | ||||||
11652273-A-G | DYZ17 | ** | |||||||
11653204-C-A | DYZ17 | ** | |||||||
11671482-C-T | DYZ17 | ** | |||||||
13821400-A-G | 11700694-A-G | DYZ17 | ** | ||||||
13858394-G-T | 11737688-G-T | DYZ17 | ** | ||||||
13882863-G-T | 11762157-G-T | ** | |||||||
13895801-C-A | 11775095-C-A | ** | |||||||
13895832-A-G | 11775126-A-G | ** | |||||||
13921085-C-A | 11800379-C-A | ** | |||||||
13922787-G-T | 11802081-G-T | ** | |||||||
13922915-A-C | 11802209-A-C | ** | |||||||
13926617-C-A | 11805911-C-A | ** | |||||||
13963435-A-G | 11842729-A-G | ** | |||||||
13975989-C-A | 11855283-C-A | FT304233 | ** | ||||||
13976891-A-G | 11856185-A-G | ** | |||||||
13981599-C-A | 11860893-C-A | ** | |||||||
13984085-G-A | 11863379-G-A | ** | |||||||
13999139-C-T | 11878433-C-T | ** | |||||||
14000085-CAGTGCATTTACA-C | 11879379-CAGTGCATTTACA-C | ** | |||||||
14000575-A-G | 11879869-A-G | ** | |||||||
14022032-A-T | 11901326-A-T | ** | |||||||
14024975-A-G | 11904269-A-G | ** | |||||||
14027138-G-T | 11906432-G-T | ** | |||||||
14077890-C-A | 11957184-C-A | ** | |||||||
14093639-C-A | 11972933-C-A | M4271 | ** | ||||||
14123039-TAATTAGCCATTCATG-T | 12002333-TAATTAGCCATTCATG-T | ** | |||||||
14183374-G-A | 12062668-G-A | ** | |||||||
14183391-G-A | 12062685-G-A | ** | |||||||
14188059-C-A | 12067353-C-A | ** | |||||||
14295686-T-A | 12174980-T-A | ** | |||||||
14357718-A-C | 12237013-A-C | ** | |||||||
14376583-T-A | 12255879-T-A | ** | |||||||
14405002-CCTTTATTAGTAAG-C | 12284299-CCTTTATTAGTAAG-C | ** | |||||||
14436529-G-T | 12315802-G-T | ** | |||||||
14474588-T-C | 12353857-T-C | ** | |||||||
14479687-C-A | 12358956-C-A | ** | |||||||
14485250-G-T | 12364519-G-T | ** | |||||||
14491029-A-G | 12370298-A-G | ** | |||||||
14506738-A-G | 12394943-A-G | ** | |||||||
14522394-G-A | 12410595-G-A | ** | |||||||
14556560-T-A | 12444761-T-A | ** | |||||||
14559807-T-C | 12448008-T-C | ** | |||||||
14573993-A-G | 12462193-A-G | ** | |||||||
14643745-C-A | 12531814-C-A | ** | |||||||
14720467-CCTGTAG-C | 12608535-CCTGTAG-C | ** | |||||||
14741928-C-T | 12629996-C-T | ** | |||||||
14785133-G-C | 12673203-G-C | ** | |||||||
14786290-C-A | 12674360-C-A | ** | |||||||
14810930-C-A | 12699001-C-A | ** | |||||||
14819680-T-C | 12707747-T-C | ** | |||||||
14925896-C-T | 12813961-C-T | ** | |||||||
14939810-C-A | 12827884-C-A | ** | |||||||
14965419-G-T | 12853494-G-T | ** | |||||||
15080622-T-C | 12968712-T-C | ** | |||||||
15092273-C-A | 12980362-C-A | ** | |||||||
15179322-A-G | 13067408-A-G | ** | |||||||
15201346-C-A | 13089432-C-A | ** | |||||||
15221949-T-C | 13110035-T-C | ** | |||||||
15305660-C-A | 13193759-C-A | ** | |||||||
15332405-C-A | 13220523-C-A | ** | |||||||
15446749-C-A | 13334869-C-A | ** | |||||||
15477264-C-T | 13365384-C-T | ** | |||||||
15491941-GTATATATATATATATATATATATATATA-G | 13380061-GTATATATATATATATATATATATATATA-G | 19×TA | ** | ||||||
15542635-A-T | 13430755-A-T | ** | |||||||
15620401-G-A | 13508521-G-A | ** | |||||||
15648836-C-A | 13536956-C-A | ** | |||||||
15665721-AC-A | 13553841-AC-A | ** | |||||||
15677919-T-A | 13566039-T-A | ** | |||||||
15714321-C-A | 13602441-C-A | ** | |||||||
15741723-T-C | 13629843-T-C | ** | |||||||
15742207-C-A | 13630327-C-A | ** | |||||||
15743593-A-G | 13631713-A-G | ** | |||||||
15785961-A-T | 13674081-A-T | ** | |||||||
15866071-G-A | 13754191-G-A | ** | |||||||
15866074-G-A | 13754194-G-A | ** | |||||||
15866084-C-A | 13754204-C-A | ** | |||||||
15904034-C-A | 13792154-C-A | ** | |||||||
15921932-A-G | 13810052-A-G | ** | |||||||
15943978-C-A | 13832098-C-A | ** | |||||||
15946671-C-A | 13834791-C-A | ** | |||||||
16034172-C-CAA | 13922292-C-CAA | 10×A | ** | ||||||
16052187-T-C | 13940307-T-C | ** | |||||||
16070210-G-A | 13958330-G-A | ** | |||||||
16181314-T-C | 14069434-T-C | ** | |||||||
16258971-C-A | 14147091-C-A | ** | |||||||
16344833-CT-C | 14232953-CT-C | ** | |||||||
16467419-C-A | 14355539-C-A | ** | |||||||
16478300-C-A | 14366420-C-A | ** | |||||||
16484249-C-A | 14372369-C-A | ** | |||||||
16575230-C-A | 14463350-C-A | ** | |||||||
16666168-C-A | 14554288-C-A | ** | |||||||
16675570-C-A | 14563690-C-A | ** | |||||||
16676651-A-G | 14564771-A-G | ** | |||||||
16702947-C-A | 14591067-C-A | ** | |||||||
16904575-G-A | 14792695-G-A | BY207378 | ** | ||||||
16938527-C-A | 14826647-C-A | ** | |||||||
17004551-T-G | 14892671-T-G | ** | |||||||
17030614-C-T | 14918734-C-T | ** | |||||||
17141744-T-C | 15029864-T-C | ** | |||||||
17215901-T-C | 15104021-T-C | ** | |||||||
17222712-G-T | 15110832-G-T | ** | |||||||
17238396-T-G | 15126516-T-G | ** | |||||||
17338534-G-A | 15226654-G-A | ** | |||||||
17340834-A-G | 15228954-A-G | ** | |||||||
17366899-C-A | 15255019-C-A | ** | |||||||
17370786-G-T | 15258906-G-T | ** | |||||||
17385258-C-A | 15273378-C-A | ** | |||||||
17426231-C-A | 15314351-C-A | ** | |||||||
17459522-A-T | 15347642-A-T | ** | |||||||
17464792-C-A | 15352912-C-A | ** | |||||||
17562017-A-G | 15450137-A-G | ** | |||||||
17562024-A-T | 15450144-A-T | ** | |||||||
17562026-A-G | 15450146-A-G | ** | |||||||
17628782-TA-T | 15516902-TA-T | ** | |||||||
17674622-T-G | 15562742-T-G | ** | |||||||
17792205-C-A | 15680325-C-A | ** | |||||||
17842365-C-A | 15730485-C-A | ** | |||||||
17952733-C-A | 15840853-C-A | ** | |||||||
17961081-C-A | 15849201-C-A | ** | |||||||
18090179-A-G | 15978299-A-G | ** | |||||||
18244516-C-A | 16132636-C-A | ** | |||||||
18491692-T-A | 16379812-T-A | P6_Dst | ** | ||||||
18564361-C-T | 16452481-C-T | ** | |||||||
18857587-TTTTG-T | 16745707-TTTTG-T | ** | |||||||
18892127-T-C | 16780247-T-C | ** | |||||||
18964116-C-A | 16852236-C-A | ** | |||||||
18965007-G-C | 16853127-G-C | ** | |||||||
19009372-A-G | 16897492-A-G | ** | |||||||
19012449-C-A | 16900569-C-A | ** | |||||||
19073324-G-T | 16961444-G-T | ** | |||||||
19078474-C-A | 16966594-C-A | ** | |||||||
19132577-A-G | 17020697-A-G | ** | |||||||
19183891-C-A | 17072011-C-A | ** | |||||||
19255497-C-A | 17143617-C-A | ** | |||||||
19271581-C-G | 17159701-C-G | ** | |||||||
19286301-C-A | 17174421-C-A | ** | |||||||
19298337-G-T | 17186457-G-T | ** | |||||||
19330410-A-T | 17218530-A-T | ** | |||||||
19338197-C-A | 17226317-C-A | ** | |||||||
19356342-A-T | 17244462-A-T | ** | |||||||
19359876-A-G | 17247996-A-G | ** | |||||||
19448304-C-A | 17336424-C-A | ** | |||||||
19469893-C-A | 17358013-C-A | ** | |||||||
19509804-C-A | 17397924-C-A | ** | |||||||
19520854-A-C | 17408974-A-C | ** | |||||||
19567123-C-A | 17455243-C-A | ** | |||||||
19720735-G-A | 17608855-G-A | P5_Prx | ** | ||||||
20334840-G-T | 18172954-G-T | P5_Dst | ** | ||||||
21073358-G-T | 18911472-G-T | ** | |||||||
21133555-TCA-T | 18971669-TCA-T | ** | |||||||
21141499-A-T | 18979613-A-T | ** | |||||||
21146344-C-A | 18984458-C-A | ** | |||||||
21182419-G-A | 19020533-G-A | ** | |||||||
21182421-G-A | 19020535-G-A | ** | |||||||
21207621-T-A | 19045735-T-A | ** | |||||||
21269421-G-T | 19107535-G-T | ** | |||||||
21323745-G-T | 19161859-G-T | ** | |||||||
21353278-C-A | 19191392-C-A | ** | |||||||
21367316-C-G | 19205430-C-G | ** | |||||||
21368864-C-A | 19206978-C-A | ** | |||||||
21391490-T-C | 19229604-T-C | ** | |||||||
21422245-C-A | 19260359-C-A | ** | |||||||
21427015-A-G | 19265129-A-G | ** | |||||||
21446217-CTTTTTTTT-C | 19284331-CTTTTTTTT-C | 23×T | ** | ||||||
21467807-C-A | 19305921-C-A | ** | |||||||
21629519-T-G | 19467633-T-G | ** | |||||||
21635332-G-T | 19473446-G-T | ** | |||||||
21663241-T-G | 19501355-T-G | ** | |||||||
21703116-C-A | 19541230-C-A | ** | |||||||
21714649-T-C | 19552763-T-C | ** | |||||||
21862966-C-A | 19701080-C-A | ** | |||||||
21902085-G-A | 19740199-G-A | ** | |||||||
21926528-C-G | 19764642-C-G | ** | |||||||
21946458-T-G | 19784572-T-G | ** | |||||||
21974968-A-T | 19813082-A-T | ** | |||||||
21975360-C-A | 19813474-C-A | ** | |||||||
22085399-C-A | 19923513-C-A | ** | |||||||
22100809-G-A | 19938923-G-A | ** | |||||||
22122257-C-A | 19960371-C-A | ** | |||||||
22123193-T-A | 19961307-T-A | ** | |||||||
22191620-A-T | 20029734-A-T | ** | |||||||
22253034-G-A | 20091148-G-A | DYZ19 | ** | ||||||
22253042-C-A | 20091156-C-A | DYZ19 | ** | ||||||
22253045-G-A | 20091159-G-A | DYZ19 | ** | ||||||
22253050-T-G | 20091164-T-G | DYZ19 | ** | ||||||
22281797-T-C | 20119911-T-C | DYZ19 | ** | ||||||
22420217-T-A | 20258331-T-A | DYZ19 | ** | ||||||
22527249-A-G | 20365363-A-G | ** | |||||||
22561415-C-A | 20399529-C-A | ** | |||||||
22739643-G-A | 20577757-G-A | ** | |||||||
22774891-CC-T | 20613005-CC-T | ** | |||||||
22793939-C-A | 20632053-C-A | ** | |||||||
22801806-C-G | 20639920-C-G | ** | |||||||
22820422-T-G | 20658536-T-G | ** | |||||||
22849517-A-G | 20687631-A-G | ** | |||||||
22849526-C-T | 20687640-C-T | ** | |||||||
22851367-A-T | 20689481-A-T | ** | |||||||
22954587-T-C | 20792701-T-C | ** | |||||||
23016846-G-T | 20854960-G-T | ** | |||||||
23034354-G-A | 20872468-G-A | Z32038 | ** | ||||||
23045328-C-A | 20883442-C-A | ** | |||||||
23045463-C-A | 20883577-C-A | ** | |||||||
23062940-AGAG-A | 20901054-AGAG-A | ** | |||||||
23119992-C-A | 20958106-C-A | ** | |||||||
23142500-C-A | 20980614-C-A | ** | |||||||
23345836-C-A | 21183950-C-A | ** | |||||||
23411328-C-A | 21249442-C-A | ** | |||||||
23412006-T-A | 21250120-T-A | ** | |||||||
23439043-A-C | 21277157-A-C | ** | |||||||
23537497-C-A | 21375611-C-A | ** | |||||||
23552626-C-A | 21390740-C-A | ** | |||||||
23579197-C-A | 21417311-C-A | ** | |||||||
23579371-C-A | 21417485-C-A | ** | |||||||
23609969-C-G | 21448083-C-G | ** | |||||||
23609990-C-A | 21448104-C-A | ** | |||||||
23789605-C-G | 21627719-C-G | ** | |||||||
23808521-C-A | 21646635-C-A | ** | |||||||
23818365-T-C | 21656479-T-C | ** | |||||||
23821830-T-TA | 21659944-T-TA | 9×A | ** | ||||||
23832988-A-G | 21671102-A-G | ** | |||||||
21752074-A-G | ** | ||||||||
24240797-C-G | 22094650-C-G | P3_b1 | ** | ||||||
24415706-T-C | 22269559-T-C | ** | |||||||
24450603-G-A | 22304456-G-A | ** | |||||||
24517976-C-A | 22371829-C-A | ** | |||||||
24600446-T-C | 22454299-T-C | BY226105 | P3_t2 | ** | |||||
25246417-C-T | 23100270-C-T | P2_r1 | ** | ||||||
25995492-G-GTATA | 23849345-G-GTATA | P1_Y1 | 24×TA | ** | |||||
26563899-AG-A | 24417752-AG-A | P1_g2 | ** | ||||||
28385852-T-C | 26239705-T-C | P1_gr2 | ** | ||||||
28468847-T-A | 26322700-T-A | ** | |||||||
28502480-G-T | 26356333-G-T | ** | |||||||
28537148-C-A | 26391001-C-A | ** | |||||||
28547524-C-A | 26401377-C-A | ** | |||||||
28596796-C-A | 26450649-C-A | ** | |||||||
28610346-C-A | 26464199-C-A | ** | |||||||
28610467-A-C | 26464320-A-C | ** | |||||||
28722287-A-G | 26576140-A-G | ** | |||||||
28767865-C-T | 26621718-C-T | ** | |||||||
28781500-T-G | 26635353-T-G | ** | |||||||
28782891-C-A | 26636744-C-A | ** | |||||||
56734792-A-G | ** | ||||||||
56838408-C-G | ** | ||||||||
56848369-A-G | ** | ||||||||
56850743-C-A | ** | ||||||||
56850889-G-T | ** | ||||||||
56857601-C-T | ** | ||||||||
56867097-G-T | ** | ||||||||
56870309-C-A | ** | ||||||||
35844-T-C | ** | ||||||||
15592539-C-A | 13480659-C-A | *** | |||||||
13140509-T-G | 10629995-T-G | *** | |||||||
14730396-C-A | 12618464-C-A | 18×A | *** | ||||||
17419435-C-T | 15307555-C-T | *** | |||||||
23185079-C-A | 21023193-C-A | *** | |||||||
28798995-G-T | 26652848-G-T | *** | |||||||
28798998-T-A | 26652851-T-A | *** | |||||||
28798999-G-A | 26652852-G-A | *** | |||||||
13706529-A-G | 11550853-A-G | DYZ17 | *** | ||||||
2822740-AAAAT-A | 2954699-AAAAT-A | 11×AAAT | *** | ||||||
28799022-A-T | 26652875-A-T | *** | |||||||
28790123-T-A | 26643976-T-A | BY151375 | *** | ||||||
20332063-T-A | 18170177-T-A | P5_Dst | *** | ||||||
22312650-C-G | 20150764-C-G | DYZ19 | *** | ||||||
8398895-T-C | 8530854-T-C | *** | *** | ||||||
10038969-G-A | 10201360-G-A | *** | |||||||
13480397-C-G | 11324721-C-G | *** | |||||||
22249756-G-A | 20087870-G-A | DYZ19 | *** | ||||||
22449976-A-T | 20288090-A-T | DYZ19 | *** | ||||||
24826083-T-G | 22679936-T-G | P3_b2 | *** | ||||||
25095778-T-C | 22949631-T-C | g1 | *** | ||||||
25097446-A-C | 22951299-A-C | g1 | *** | ||||||
25869914-ATATC-A | 23723767-ATATC-A | P1_Y1 | *** | ||||||
26350330-G-A | 24204183-G-A | P1_Y1 | *** | ||||||
8400900-CTTT-C | 8532859-CTTT-C | 14×T | *** | ||||||
10896375-C-T | *** | ||||||||
13885887-C-T | 11765181-C-T | *** | |||||||
10896362-C-T | *** | ||||||||
18951813-C-A | 16839933-C-A | *** | |||||||
14071381-A-G | 11950675-A-G | *** | |||||||
19391127-G-T | 17279247-G-T | *** | |||||||
10921078-C-A | *** | ||||||||
10937432-A-T | *** | ||||||||
11643724-G-T | DYZ17 | *** | |||||||
11003754-A-T | *** | ||||||||
4770400-G-T | 4902359-G-T | *** | |||||||
21905300-G-A | 19743414-G-A | *** | |||||||
21673079-C-A | 19511193-C-A | *** | |||||||
2960051-G-A | 3092010-G-A | *** | |||||||
10911982-C-A | FT436341 | *** | |||||||
9784741-G-A | 9947132-G-A | *** | |||||||
21946945-ATTT-A | 19785059-ATTT-A | 15×T | *** | ||||||
14329736-GTT-G | 12209030-GTT-G | 17×T | *** | ||||||
13468254-G-T | 11312578-G-T | *** | |||||||
10935592-C-T | *** | ||||||||
7142774-C-A | 7274733-C-A | *** | |||||||
14825125-CT-C,CTT | 12713192-CT-C,CTT | 20×T | *** | ||||||
4100904-T-C | 4232863-T-C | *** | |||||||
10763146-C-T | *** | ||||||||
10935576-C-A | *** | ||||||||
23263747-G-A | 21101861-G-A | *** | |||||||
2834866-A-C | 2966825-A-C | *** | |||||||
8333480-T-TTTC,TTTCTTC | 8465439-T-TTTC,TTTCTTC | 31×TTC | *** | ||||||
8425684-A-G | 8557643-A-G | *** | |||||||
18019855-G-T | 15907975-G-T | *** | |||||||
17851692-C-A | 15739812-C-A | *** | |||||||
10647752-C-A | *** | ||||||||
10911962-T-G | *** | ||||||||
10911965-T-C | *** | ||||||||
10911971-T-G | *** | ||||||||
56850461-G-A,T | *** | ||||||||
10929577-C-A | *** | ||||||||
15340420-C-T | 13228539-C-T | *** | |||||||
4088229-C-T | 4220188-C-T | *** | |||||||
4215578-G-T | 4347537-G-T | *** | |||||||
7136914-T-G | 7268873-T-G | *** | |||||||
7234881-C-A | 7366840-C-A | *** | |||||||
7780759-C-A | 7912718-C-A | *** | |||||||
7947674-G-GT | 8079633-G-GT | *** | |||||||
8013429-C-A | 8145388-C-A | *** | |||||||
8293978-G-GAA | 8425937-G-GAA | 10×A | *** | ||||||
9028379-C-A | 9190770-C-A | *** | |||||||
9042516-A-G | 9204907-A-G | *** | |||||||
9328991-C-A | 9491382-C-A | *** | |||||||
10759944-GCATTC-G | *** | ||||||||
10760381-A-AGTTGA,C | *** | ||||||||
10777163-C-A | FGC78550 | *** | |||||||
10839112-C-A | *** | ||||||||
10859447-T-C | *** | ||||||||
10935610-T-G | *** | ||||||||
10935611-C-A,T | *** | ||||||||
10951693-T-C | *** | ||||||||
10964172-C-A | *** | ||||||||
11024797-G-T | *** | ||||||||
13447122-C-T | 11291446-C-T | BY49647 | *** | ||||||
13466427-C-A,G | 11310751-C-A,G | *** | |||||||
13466580-C-A | 11310904-C-A | *** | |||||||
13474752-T-G | 11319076-T-G | *** | |||||||
13480926-A-G | 11325250-A-G | *** | |||||||
13483301-C-G,T | 11327625-C-G,T | *** | |||||||
13644865-T-C | 11489189-T-C | *** | |||||||
11645990-C-T | DYZ17 | *** | |||||||
11676390-CA-C | DYZ17 | *** | |||||||
13859289-C-A | 11738583-C-A | DYZ17 | *** | ||||||
14252167-C-A | 12131461-C-A | *** | |||||||
14604676-C-A | 12492878-C-A | *** | |||||||
15332178-G-A | 13220296-G-A | *** | |||||||
16078333-C-A | 13966453-C-A | Y35357 | *** | ||||||
16275746-A-G | 14163866-A-G | *** | |||||||
16311995-T-C | 14200115-T-C | *** | |||||||
16422190-C-A | 14310310-C-A | *** | |||||||
16720402-G-T | 14608522-G-T | *** | |||||||
17140601-T-A | 15028721-T-A | *** | |||||||
17289677-A-G | 15177797-A-G | *** | |||||||
17424954-A-G | 15313074-A-G | *** | |||||||
17478430-C-A | 15366550-C-A | *** | |||||||
17598043-C-A | 15486163-C-A | *** | |||||||
18191884-A-G | 16080004-A-G | *** | |||||||
18749041-G-A | 16637161-G-A | *** | |||||||
18806044-CTTTTT-C,CTT | 16694164-CTTTTT-C,CTT | 19×T | *** | ||||||
18997354-C-A | 16885474-C-A | *** | |||||||
19523429-G-T | 17411549-G-T | *** | |||||||
21436019-C-A | 19274133-C-A | *** | |||||||
21547859-CTGTGTG-C,CTG | 19385973-CTGTGTG-C,CTG | 17×TG | *** | ||||||
22577951-G-T | 20416065-G-T | 24×A | *** | ||||||
22962435-G-GT | 20800549-G-GT | *** | |||||||
23587528-C-T | 21425642-C-T | *** | |||||||
24433089-G-T | 22286942-G-T | *** | |||||||
24636349-CTTTTTTT-C | 22490202-CTTTTTTT-C | P3_t2 | 17×T | *** | |||||
28544797-C-A | 26398650-C-A | *** | |||||||
28547274-C-A | 26401127-C-A | *** | |||||||
56835169-A-G,T | *** | ||||||||
56858262-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.