Davis

FTDNA: 499541, BigY2: 499541

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > ZZ10 > Z253 > Z2534 > ZZ5 > Z2185 > BY44331 > Z2186 > 13669582CAATGGA

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
499541		BigY2
499541
6238280-C-T 6370239-C-T IR3_Dst ***A*
18313329-G-A 16201449-G-A P6_Prx ***A*
18318929-G-C 16207049-G-C P6_Prx ***A*
19883135-G-A 17771255-G-A P5_Prx ***A*
19903858-A-G 17791978-A-G P5_Prx ***A*
19934202-A-T 17822322-A-T P5_Prx ***A*
19963194-T-G 17851314-T-G P5_Prx ***A*
24287662-C-T 22141515-C-T P3_t1 ***A*
26072191-C-CA 23926044-C-CA P1_Y1 ***A*
13687911-G-C 11532235-G-C A*
2696883-C-T 2828842-C-T YP1468YP1468 YY++
3160303-C-T 3292262-C-T BY57458 ++
7616542-G-A 7748501-G-A Y84453 YY++
8215750-G-A 8347709-G-A BY70820 YY++
8830353-G-A 8962312-G-A BY76163 YY++
9462662-C-T 9625053-C-T BY79577 Y**+
13454006-G-A 11298330-G-A BY51956 **+
13479964-G-C 11324288-G-C BY86048 ++
13617303-C-G 11461627-C-G BY86698 **+
14046014-T-A 11925308-T-A BY92594 YY++
14368881-C-T 12248177-C-T Y4062 YY++
15183456-T-C 13071542-T-C BY100076 YY++
15306756-A-T 13194858-A-T BY100703 YY++
15802981-G-T 13691101-G-T BY104223 YY++
16489576-C-G 14377696-C-G BY108177 YY++
17018502-C-G 14906622-C-G BY111778 YY++
17891573-C-A 15779693-C-A BY118173 YY++
17921079-T-G 15809199-T-G BY118449 YY++
18588309-T-C 16476429-T-C BY122389 YY++
18750608-G-A 16638728-G-A BY123616 YY++
19069574-A-G 16957694-A-G BY126002 YY++
21594572-T-A 19432686-T-A BY134060 YY++
22081969-A-C 19920083-A-C BY137493 YY++
22094893-A-G 19933007-A-G BY137577 YY++
22293927-A-G 20132041-A-G BY216440 DYZ19 ++
22511958-C-T 20350072-C-T BY225787 DYZ19 **+
22669620-G-A 20507734-G-A BY52036 YY++
22681877-T-C 20519991-T-C BY140021 YY++
23194775-C-T 21032889-C-T BY143724 Y++
23300704-A-G 21138818-A-G BY144440 YY++
23300727-G-T 21138841-G-T BY144441 YY++
23331219-A-C 21169333-A-C BY144649 YY++
23622069-T-C 21460183-T-C BY146793 YY++
26107231-A-T 23961084-A-T BY226658 P1_Y1 **+
26107232-T-C 23961085-T-C BY226659 P1_Y1 **+
24600442-CTCTTTCTTTCTT-C 22454295-CTCTTTCTTTCTT-C P3_t2 18×TCTT*
22278747-G-T 20116861-G-T DYZ19 ****
26107228-A-AC 23961081-A-AC P1_Y1 ****
22275840-A-G 20113954-A-G DYZ19 *
13846734-A-G 11726028-A-G **
20669271-C-G 18507385-C-G E61 P4_Prx **
13460310-T-C 11304634-T-C **
9952849-A-G 10115240-A-G **
13856868-C-A 11736162-C-A **
19020168-C-A 16908288-C-A **
2925582-C-G 3057541-C-G **
15476324-G-A 13364444-G-A YSC0001278 CTS4204 PF4545 **
19397070-CAT-C 17285190-CAT-C **
13860789-G-A 11740083-G-A **
23415308-G-T 21253422-G-T **
3483105-TA-T 3615064-TA-T 9×A**
9328552-T-C 9490943-T-C ****
10988839-C-G **
17654010-CT-C 15542130-CT-C 8×T**
10831642-C-A **
10914719-A-C **
10914728-A-T **
10763059-T-A **
16783481-C-A 14671601-C-A **
10841928-T-G **
10826851-C-T **
10826853-C-T **
26421471-T-G 24275324-T-G P1_Y1 **
10744261-C-G **
10968206-T-TTCCACTCCAC **
6688753-C-A 6820712-C-A **
21104475-C-A 18942589-C-A **
7160871-C-A 7292830-C-A **
10655872-ACCATCCCAAT-A **
10655901-T-C **
10655941-T-G **
10655948-A-C **
10669401-TTCATC-T **
26124492-AGAAG-A 23978345-AGAAG-A P1_Y1 **
10969235-TCACTC-T **
15386666-AAAAT-A 13274786-AAAAT-A 7×AAAT**
10885183-A-T **
10954265-T-C **
10954273-C-T **
13445873-A-T 11290197-A-T **
13445883-C-T 11290207-C-T **
15402765-ATT-A 13290885-ATT-A 14×T**
25466543-G-T 23320396-G-T P2_r2 **
17876277-C-A 15764397-C-A Y9188 FGC1419 **
10841920-T-A **
10841959-C-T **
10693740-ATTCAATTCCT-A **
10841943-C-G **
11018258-C-T **
11660260-C-A **
25466546-G-T 23320399-G-T P2_r2 **
28761382-CA-C 26615235-CA-C 31×A**
9995984-C-A 10158375-C-A **
10988824-C-G **
10988834-C-T **
10678142-C-A **
10678146-C-T **
10678162-C-T **
18271018-G-GTTTT 16159138-G-GTTTT 17×T**
16648154-T-A 14536274-T-A **
10973654-T-C **
18982593-AAG-A 16870713-AAG-A **
25466559-A-T 23320412-A-T P2_r2 **
25466566-A-T 23320419-A-T P2_r2 **
20025485-C-T 17913605-C-T P5_Prx **
8988719-C-A 9151110-C-A **
12379469-C-A **
13460328-A-G 11304652-A-G **
13460331-C-A 11304655-C-A **
21987364-A-G 19825478-A-G BY136890 **
28814116-C-A 26667969-C-A **
17071254-G-T 14959374-G-T **
17215937-CT-C 15104057-CT-C 8×T**
18848435-G-T 16736555-G-T **
10938421-A-C **
11018260-C-T **
14993842-ATT-A 12881927-ATT-A 13×T**
10763027-A-T **
10973629-T-A **
10983155-C-A **
26421475-T-G 24275328-T-G P1_Y1 **
26421477-T-G 24275330-T-G P1_Y1 **
10685796-C-G **
17676351-G-T 15564471-G-T **
17014527-C-A 14902647-C-A **
7252404-T-A 7384363-T-A **
56842128-C-A **
10983632-C-A **
6732592-C-A 6864551-C-A **
14888032-C-A 12776098-C-A **
10954267-A-G **
10954282-A-T **
10954290-C-G **
10821889-C-CTCCATTTAAA **
7092529-C-G 7224488-C-G **
6978133-C-A 7110092-C-A **
2683336-T-G 2815295-T-G **
2746035-C-G 2877994-C-G **
3012566-G-T 3144525-G-T **
3115059-T-G 3247018-T-G **
3165327-G-T 3297286-G-T **
3186322-G-T 3318281-G-T **
3252608-G-T 3384567-G-T **
3292236-C-A 3424195-C-A **
3300577-G-T 3432536-G-T **
3386792-A-G 3518751-A-G **
3510618-G-T 3642577-G-T **
3575875-G-T 3707834-G-T **
3641280-G-T 3773239-G-T **
3817445-A-C 3949404-A-C **
3892670-C-A 4024629-C-A **
3961412-C-A 4093371-C-A **
4201147-C-A 4333106-C-A **
4215682-G-A 4347641-G-A BY152369 **
4242962-T-A 4374921-T-A **
4264110-G-T 4396069-G-T **
4266253-G-T 4398212-G-T **
4276708-G-T 4408667-G-T **
4357577-G-T 4489536-G-T **
4385598-A-G 4517557-A-G **
4428167-G-T 4560126-G-T **
4428985-G-A 4560944-G-A **
4445368-C-A 4577327-C-A **
4478493-G-A 4610452-G-A FT49035 **
4530930-G-T 4662889-G-T **
4557492-A-C 4689451-A-C **
4598784-C-T 4730743-C-T **
4602477-C-A 4734436-C-A **
4687957-C-A 4819916-C-A **
4701676-G-T 4833635-G-T **
4703585-T-C 4835544-T-C **
4793191-T-G 4925150-T-G **
4862769-A-G 4994728-A-G **
4900748-G-T 5032707-G-T **
5087292-C-A 5219251-C-A **
5112830-C-A 5244789-C-A **
5148853-G-T 5280812-G-T **
5162277-G-T 5294236-G-T **
5198517-A-G 5330476-A-G **
5207721-C-A 5339680-C-A **
5236987-C-T 5368946-C-T **
5263609-C-A 5395568-C-A **
5359242-T-A 5491201-T-A **
5442148-C-A 5574107-C-A **
5635233-T-G 5767192-T-G **
5662682-G-T 5794641-G-T **
5704476-G-T 5836435-G-T **
5856837-G-T 5988796-G-T **
5860704-C-A 5992663-C-A **
5869622-A-T 6001581-A-T **
5990340-G-T 6122299-G-T **
6125117-C-A 6257076-C-A **
6259572-A-T 6391531-A-T IR3_Dst **
6367891-C-A 6499850-C-A **
6476705-T-A 6608664-T-A **
6476712-A-T 6608671-A-T **
6478574-C-A 6610533-C-A **
6532201-C-A 6664160-C-A **
6533418-T-G 6665377-T-G **
6645411-C-A 6777370-C-A **
6693091-C-A 6825050-C-A **
6693120-C-A 6825079-C-A **
6861583-C-A 6993542-C-A **
6975322-C-T 7107281-C-T **
7013579-T-C 7145538-T-C **
7040540-G-T 7172499-G-T **
7044579-C-A 7176538-C-A **
7093764-C-A 7225723-C-A **
7102362-G-T 7234321-G-T **
7142891-G-T 7274850-G-T **
7170893-C-T 7302852-C-T FT83381 **
7231531-C-A 7363490-C-A **
7257052-C-A 7389011-C-A **
7269297-T-A 7401256-T-A **
7303132-C-G 7435091-C-G **
7449517-C-T 7581476-C-T IR1_L **
7536365-A-G 7668324-A-G **
7756314-G-T 7888273-G-T **
7774987-G-T 7906946-G-T **
7829042-G-T 7961001-G-T **
7917489-G-T 8049448-G-T **
8076247-C-A 8208206-C-A **
8140397-T-C 8272356-T-C **
8342931-T-G 8474890-T-G **
8379649-T-A 8511608-T-A **
8408470-G-T 8540429-G-T **
8672033-A-C 8803992-A-C **
8693662-TG-T 8825621-TG-T **
8816659-G-T 8948618-G-T **
9055971-C-G **
9120407-G-T **
8988635-T-C 9151026-T-C **
9172400-G-T 9334791-G-T **
9231748-C-T 9394139-C-T **
9502549-A-C 9664940-A-C **
9541977-A-C 9704368-A-C IR3_Prx **
9885443-A-T 10047834-A-T **
9924288-C-A 10086679-C-A **
9956466-T-A 10118857-T-A **
9993448-C-A 10155839-C-A **
9993552-C-A 10155943-C-A **
10645883-T-A **
10659584-T-G **
10661186-CCACT-C **
10661193-AT-A **
10662126-C-A **
10668083-G-T **
10669370-A-T **
10669375-A-T **
10678062-G-GATTCC **
10687857-C-A **
10687900-C-A **
10692260-A-T **
10763032-A-AC **
10763044-T-G **
10763060-C-G **
10764305-T-C **
10767925-C-CCAGTG **
10767935-C-G **
10772416-T-C **
10780572-C-A **
10824296-C-A **
10852696-T-G **
10856734-T-G **
10861847-T-C **
10867557-C-A **
10868091-C-A **
10868115-A-C **
10869594-G-T **
10885435-C-A **
10887349-A-T **
10911291-C-G **
10919539-C-A **
10929219-T-G **
10935521-CCTT-C **
10938347-C-G **
10938395-T-A **
10938411-C-G **
10954240-C-G **
10958434-C-A **
10958973-T-C **
10960457-C-A **
10960961-C-A **
10968263-C-A **
10973605-T-A **
10977361-G-T **
10987926-T-G **
10987929-C-A **
10996613-C-A **
11014590-G-C **
11018244-A-T **
11018270-C-A **
11018272-C-A **
11026435-A-T **
11032827-G-T **
11032831-T-G **
11032858-A-C **
11032859-T-A **
11032864-A-C **
11032871-A-C **
11032889-C-T **
11034869-T-G **
13249696-C-A 11094020-C-A **
13258716-C-A 11103040-C-A **
13310755-T-G 11155079-T-G **
13328834-G-A 11173158-G-A **
13350033-C-G 11194357-C-G **
13476051-C-G 11320375-C-G **
13483873-T-C 11328197-T-C **
13585264-C-A 11429588-C-A **
13603670-T-A 11447994-T-A **
13606423-A-G 11450747-A-G **
13725991-G-T 11570315-G-T **
11651964-T-A **
11667275-G-T **
13855795-AAATGG-A 11735089-AAATGG-A **
13871318-G-A 11750612-G-A **
13874221-T-A 11753515-T-A **
13963198-C-A 11842492-C-A **
13974161-G-T 11853455-G-T **
14006603-G-T 11885897-G-T **
14012328-G-T 11891622-G-T **
14160229-G-T 12039523-G-T **
14257836-A-G 12137130-A-G **
14284756-A-C 12164050-A-C **
14304350-A-C 12183644-A-C **
14307309-A-T 12186603-A-T **
14390027-A-T 12269323-A-T **
12370661-T-G **
14539187-A-C 12427388-A-C **
14563987-A-T 12452187-A-T **
14580872-A-C 12469072-A-C **
14635753-C-A 12523822-C-A **
14649583-C-A 12537648-C-A **
14756078-C-A 12644147-C-A **
14766606-C-A 12654675-C-A 12×T**
14784784-C-A 12672854-C-A **
14810987-T-G 12699058-T-G **
15142454-A-G 13030541-A-G **
15185306-A-G 13073392-A-G **
15280384-C-A 13168483-C-A **
15282540-A-G 13170639-A-G **
15406871-C-T 13294991-C-T **
15452485-G-T 13340605-G-T **
15468220-G-A 13356340-G-A **
15468228-A-G 13356348-A-G **
15472052-C-A 13360172-C-A **
15497358-G-A 13385478-G-A BY101991 **
15503538-C-A 13391658-C-A **
15542119-A-C 13430239-A-C **
15641725-A-T 13529845-A-T **
15769477-C-A 13657597-C-A **
15775512-G-T 13663632-G-T **
15775516-G-T 13663636-G-T **
15798348-C-A 13686468-C-A **
15870443-C-A 13758563-C-A **
15944353-C-A 13832473-C-A **
15950495-G-A 13838615-G-A PH1920 **
15987910-C-A 13876030-C-A **
16008809-G-T 13896929-G-T **
16044168-T-G 13932288-T-G **
16049039-C-A 13937159-C-A **
16079282-T-G 13967402-T-G **
16093070-T-G 13981190-T-G **
16166841-A-T 14054961-A-T P8_Dst **
16166845-A-T 14054965-A-T P8_Dst **
16166866-A-T 14054986-A-T P8_Dst **
16166882-A-T 14055002-A-T P8_Dst **
16166896-A-T 14055016-A-T P8_Dst **
16166906-A-T 14055026-A-T P8_Dst **
16240742-T-C 14128862-T-C **
16272089-G-T 14160209-G-T **
16394731-T-G 14282851-T-G **
16424147-T-G 14312267-T-G **
16451778-A-T 14339898-A-T **
16514528-G-T 14402648-G-T **
16623345-G-A 14511465-G-A **
16683363-G-T 14571483-G-T **
16704413-T-G 14592533-T-G **
16706196-C-A 14594316-C-A **
16712909-C-A 14601029-C-A **
16778005-C-A 14666125-C-A **
17093785-C-A 14981905-C-A **
17098211-C-A 14986331-C-A **
17164977-G-T 15053097-G-T **
17187450-C-A 15075570-C-A **
17225828-A-C 15113948-A-C **
17225950-A-C 15114070-A-C **
17702602-C-A 15590722-C-A **
17703397-C-A 15591517-C-A **
17770620-C-A 15658740-C-A **
17779632-T-A 15667752-T-A **
17871946-C-A 15760066-C-A **
17889802-C-A 15777922-C-A **
17955966-C-A 15844086-C-A **
17955999-A-T 15844119-A-T FT79644 **
18097891-T-C 15986011-T-C **
18238884-T-A 16127004-T-A **
18423809-T-C 16311929-T-C P6_Gap **
18703753-C-A 16591873-C-A **
18711497-G-T 16599617-G-T **
19409890-T-A 17298010-T-A **
19449118-C-A 17337238-C-A **
19508252-C-T 17396372-C-T FT83982 **
19540107-G-A 17428227-G-A **
19899689-A-C 17787809-A-C P5_Prx **
19912941-G-T 17801061-G-T P5_Prx **
19936162-T-G 17824282-T-G P5_Prx **
20334818-A-C 18172932-A-C P5_Dst **
20342543-T-G 18180657-T-G P5_Dst **
20342546-G-T 18180660-G-T P5_Dst **
20342555-T-G 18180669-T-G P5_Dst **
20378339-G-T 18216453-G-T P5_Dst **
20378373-A-T 18216487-A-T P5_Dst **
20378380-C-A 18216494-C-A P5_Dst **
20378391-C-A 18216505-C-A P5_Dst **
20378404-G-T 18216518-G-T P5_Dst **
20393210-G-T 18231324-G-T P5_Dst **
20393225-G-T 18231339-G-T P5_Dst **
20393228-G-T 18231342-G-T P5_Dst **
20393237-A-T 18231351-A-T P5_Dst **
20393253-C-A 18231367-C-A P5_Dst **
20497525-T-G 18335639-T-G P5_Dst **
20703015-A-AT 18541129-A-AT P4_Prx **
20840300-G-T 18678414-G-T P4_Gap **
21042303-A-G 18880417-A-G **
21238181-T-G 19076295-T-G **
21253977-T-A 19092091-T-A **
21324482-T-A 19162596-T-A **
21346842-CA-C 19184956-CA-C **
21515799-C-A 19353913-C-A **
21663173-G-A 19501287-G-A FT84030 **
21795600-C-T 19633714-C-T **
21851500-C-A 19689614-C-A **
21899894-G-T 19738008-G-T **
22078324-T-C 19916438-T-C FT84072 **
22092742-T-G 19930856-T-G **
22189115-C-A 20027229-C-A **
22210596-T-A 20048710-T-A **
22363890-C-T 20202004-C-T DYZ19 **
22363907-A-T 20202021-A-T DYZ19 **
22363915-C-A 20202029-C-A DYZ19 **
22363926-G-T 20202040-G-T DYZ19 **
22363939-C-G 20202053-C-G DYZ19 **
22363942-A-T 20202056-A-T DYZ19 **
22366291-C-A 20204405-C-A DYZ19 **
22651056-G-T 20489170-G-T **
22994716-C-A 20832830-C-A **
23005390-C-A 20843504-C-A **
23049211-A-C 20887325-A-C **
23050326-G-T 20888440-G-T **
23050354-T-C 20888468-T-C **
23061119-T-C 20899233-T-C **
23380911-C-A 21219025-C-A **
23734321-C-T 21572435-C-T **
23845855-G-T 21683969-G-T FT182847 **
23900076-A-G 21738190-A-G **
24127467-C-A 21981320-C-A P3_b1 **
24241116-A-G 22094969-A-G P3_b1 **
24278286-C-CAG 22132139-C-CAG P3_b1 8×AG**
24458736-T-A 22312589-T-A **
24458753-T-A 22312606-T-A **
24458755-T-A 22312608-T-A **
24458757-T-A 22312610-T-A **
24458758-C-A 22312611-C-A **
24666253-G-C 22520106-G-C P3_b2 **
24884234-T-C 22738087-T-C g1 **
25030715-C-A 22884568-C-A g1 **
25466540-G-AT 23320393-G-AT P2_r2 **
25876254-C-A 23730107-C-A P1_Y1 **
25876256-G-T 23730109-G-T P1_Y1 **
25876278-C-A 23730131-C-A P1_Y1 **
25886878-A-C 23740731-A-C P1_Y1 **
25944977-C-A 23798830-C-A P1_Y1 **
26012979-C-A 23866832-C-A P1_Y1 **
26124639-A-C 23978492-A-C P1_Y1 **
26421481-T-TGGGGGG 24275334-T-TGGGGGG P1_Y1 **
26435110-C-A 24288963-C-A P1_Y1 **
27356403-G-T 25210256-G-T P1_g3 **
27356427-G-T 25210280-G-T P1_g3 **
27356434-C-A 25210287-C-A P1_g3 **
27356448-A-T 25210301-A-T P1_g3 **
27356449-C-A 25210302-C-A P1_g3 **
27499336-AAAAAGAAAT-A 25353189-AAAAAGAAAT-A P1_Y2 **
27733776-T-A 25587629-T-A P1_Y2 **
27894834-A-AAT 25748687-A-AAT P1_Y2 **
27916303-C-A 25770156-C-A P1_Y2 **
28497312-C-A 26351165-C-A **
28602505-ATTT-A 26456358-ATTT-A 19×T**
28618217-C-A 26472070-C-A **
28633252-G-A 26487105-G-A **
28644738-C-A 26498591-C-A **
28647074-C-T 26500927-C-T **
28707776-G-T 26561629-G-T **
28761421-A-T 26615274-A-T **
56706963-G-T **
56706995-A-C **
56707153-A-G **
56728188-G-C **
56847245-A-C **
56873659-G-T **
56883921-C-A **
6862-T-C **
6884-C-T **
58980688-TCCATA-T,TCCATT 56834541-TCCATA-T,TCCATT ***
58849513-TAGTCCATTCCATTTG-T 56741329-GAATGGAATGGACTCA-G ***
25016655-C-CT 22870508-C-CT g1 16×T***
13842028-C-G 11721322-C-G ***
22357405-G-A 20195519-G-A DYZ19 ***
13855162-A-G 11734456-A-G ***
13801479-T-G 11680773-T-G ***
13477422-C-A 11321746-C-A ***
13477424-C-A 11321748-C-A ***
13477450-C-T 11321774-C-T ***
13663837-AC-A 11508161-AC-A ***
13467155-C-A 11311479-C-A ***
20034229-G-T 17922349-G-T P5_Prx ***
28784406-T-C 26638259-T-C ***
58840945-C-A 56749926-G-T ***
13824521-C-A 11703815-C-A FTA26219 ***
13801422-T-A 11680716-T-A ***
13801489-G-A 11680783-G-A ***
22364604-T-A 20202718-T-A DYZ19 ***
13846335-GAATGGAATGA-G 11725629-GAATGGAATGA-G ***
13845603-A-T 11724897-A-T ***
13845604-T-G 11724898-T-G ***
13477420-G-A 11321744-G-A ***
23654353-T-G 21492467-T-G FTB18990 ***
13841987-CAAATT-C 11721281-CAAATT-C ***
22259287-T-A 20097401-T-A DYZ19 ***
22276222-G-T 20114336-G-T DYZ19 ***
22296669-C-T 20134783-C-T DYZ19 ***
22317472-T-C 20155586-T-C DYZ19 ***
24153356-C-A 22007209-C-A P3_b1 ***
24317546-A-G 22171399-A-G P3_t1 ***
24782146-A-G 22635999-A-G P3_b2 ***
24916273-T-C 22770126-T-C g1 ***
25286925-C-T 23140778-C-T P2_r1 ***
8144769-CA-C 8276728-CA-C 9×A***
13643792-A-G 11488116-A-G ***
11000423-C-CCTGGGGTTT ***
11000430-T-TTCCTA ***
13468312-C-T 11312636-C-T ***
11014473-A-G ***
7855944-T-G 7987903-T-G ***
10785283-C-GGGTTA ***
9956378-AAAG-A 10118769-AAAG-A 8×AAG***
13488543-C-A 11332867-C-A ***
10983157-G-A FT178452 ***
10983181-C-T ***
10785299-A-T ***
7613813-C-A 7745772-C-A ***
9462138-C-A 9624529-C-A ***
10954297-A-G ***
2666624-A-G 2798583-A-G ***
2666625-T-C 2798584-T-C ***
3662344-T-C 3794303-T-C ***
5401177-C-A 5533136-C-A ***
6674518-G-T 6806477-G-T FT83335 ***
7043622-G-T 7175581-G-T ***
7153892-C-T 7285851-C-T ***
7499955-C-A 7631914-C-A IR1_L ***
7707659-T-C 7839618-T-C ***
8100681-C-A 8232640-C-A ***
8384784-G-T 8516743-G-T ***
8575989-A-T 8707948-A-T ***
9321869-C-A 9484260-C-A ***
10668345-T-AGCTCC ***
10785263-C-CATTTA ***
10789359-C-T ***
10800295-C-A ***
10887985-T-A,C ***
10938997-C-A,T ***
10987835-A-AC ***
11014433-A-G ***
13194349-C-A 11038673-C-A ***
13194669-C-A 11038993-C-A ***
13481885-A-T 11326209-A-T ***
13482643-T-C 11326967-T-C ***
13829170-C-A 11708464-C-A ***
14513443-T-C 12401648-T-C ***
16060038-C-A 13948158-C-A ***
16786213-CTTTTTT-C,CTTTTT 14674333-CTTTTTT-C,CTTTTT 22×T***
17196643-AGGAAAG-A 15084763-AGGAAAG-A ***
18752086-G-T 16640206-G-T ***
19253056-G-T 17141176-G-T ***
19415714-C-A 17303834-C-A ***
21162967-C-A 19001081-C-A ***
22727386-C-A 20565500-C-A ***
23475646-C-T 21313760-C-T ***
28760218-T-C 26614071-T-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.