Jones

FTDNA: 618221, BigY2: 618221

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > CTS1751 > Z17966 > Y18513 > BY30417

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
618221		BigY2
618221
18315425-C-T 16203545-C-T P6_Prx ***A*
22289591-G-A 20127705-G-A DYZ19 ***A*
22437271-C-G 20275385-C-G FGC14161 Y3535 DYZ19 ++
17093849-C-CA 14981969-C-CA 9×A++
2712959-G-A 2844918-G-A Y81273 YY++
2819653-A-G 2951612-A-G Y81542 YY++
7075864-T-C 7207823-T-C Y83311 YY++
7696744-A-C 7828703-A-C Y84700 YY++
8688880-A-G 8820839-A-G Y87734 YY++
9170993-G-A 9333384-G-A Y88790 Y++
9380884-A-G 9543275-A-G Y88835 Y++
9883320-A-G 10045711-A-G Y89465 YY++
13998761-T-C 11878055-T-C Y89966 YY++
14586359-T-G 12474559-T-G Y91746 YY++
15357095-C-T 13245214-C-T Y93619 YY++
16306321-G-A 14194441-G-A Y95919 YY++
17331426-G-A 15219546-G-A Y98812 YY++
17663630-G-A 15551750-G-A Z43533 YY++
18087471-G-A 15975591-G-A Y101233 YY++
19292917-A-T 17181037-A-T Y104303 YY++
21503725-T-G 19341839-T-G Y106704 YY++
21862718-C-T 19700832-C-T Y107710 YY++
21062762-ATGTG-A 18900876-ATGTG-A 17×TG****
22230957-C-T 20069071-C-T DYZ19 ****
22257690-C-T 20095804-C-T FT453891 DYZ19 ****
22302963-A-C 20141077-A-C DYZ19 ****
22318578-C-G 20156692-C-G DYZ19 ****
15558499-TAGAC-T 13446619-TAGAC-T 5×AGAC*
15290972-G-T 13179071-G-T **
4416742-C-G 4548701-C-G FT152400 **
14025624-GAAA-G 11904918-GAAA-G **
22441922-G-A 20280036-G-A BY47964 DYZ19 *****
18976793-A-T 16864913-A-T Y103227 **
6996712-G-T 7128671-G-T **
9383557-G-T 9545948-G-T **
22425330-T-C 20263444-T-C DYZ19 *****
15435213-C-T 13323333-C-T **
23128002-C-A 20966116-C-A **
24262109-T-TC 22115962-T-TC P3_b1 **
7775736-C-A 7907695-C-A **
23252596-G-T 21090710-G-T **
2970428-C-A 3102387-C-A **
11000041-T-C **
7235861-A-T 7367820-A-T **
15995216-G-A 13883336-G-A **
2681017-C-A 2812976-C-A **
19107405-A-T 16995525-A-T **
6293401-C-T 6425360-C-T IR3_Dst **
23831354-A-G 21669468-A-G **
19745037-C-A 17633157-C-A P5_Prx **
10802232-A-G **
10802238-C-A **
24013897-G-T 21867750-G-T **
26081673-A-C 23935526-A-C P1_Y1 **
14339199-C-A 12218494-C-A **
16938476-C-A 14826596-C-A FTB41549 **
14667784-C-A 12555849-C-A **
10843635-C-A **
22212098-C-A 20050212-C-A **
3033181-C-A 3165140-C-A **
21752615-G-T **
11000011-A-C **
11000020-A-T **
11000025-A-G **
22240940-T-C 20079054-T-C DYZ19 **
5216282-C-A 5348241-C-A **
21295229-A-T 19133343-A-T **
10890263-CTCCAT-C **
14274120-C-A 12153414-C-A **
15286687-G-T 13174786-G-T **
13226403-C-A 11070727-C-A FGC77423 **
10750673-C-A **
22962096-C-A 20800210-C-A **
10664308-C-A **
8720497-C-A 8852456-C-A **
19409944-C-A 17298064-C-A **
5809102-C-A 5941061-C-A **
24751239-A-T 22605092-A-T P3_b2 **
21515768-C-T 19353882-C-T **
14609722-A-G 12497924-A-G **
14609724-C-T 12497926-C-T **
23600023-A-C 21438137-A-C **
11009952-C-A **
28111497-C-A 25965350-C-A P1_Y2 **
3990603-C-T 4122562-C-T **
9438173-G-A 9600564-G-A **
28778976-C-T 26632829-C-T **
14977315-A-T 12865390-A-T **
22023229-A-T 19861343-A-T **
10750678-C-A **
3550573-TCA-T 3682532-TCA-T **
7199403-G-A 7331362-G-A Y24030 **
9928714-G-T 10091105-G-T **
14316361-C-A 12195655-C-A **
16354321-C-A 14242441-C-A **
27932628-A-AG 25786481-A-AG P1_Y2 **
5644290-C-A 5776249-C-A **
22240963-T-CC 20079077-T-CC DYZ19 **
13214883-T-C 11059207-T-C **
15423303-G-A 13311423-G-A **
17370865-C-A 15258985-C-A **
14324929-A-T 12204223-A-T **
26345807-C-A 24199660-C-A P1_Y1 **
10984380-T-C **
3093180-T-C 3225139-T-C **
24518164-T-A 22372017-T-A **
28462227-A-G 26316080-A-G **
5220976-C-A 5352935-C-A **
17616713-C-A 15504833-C-A **
18905397-C-A 16793517-C-A **
7420640-C-A 7552599-C-A **
17346379-C-A 15234499-C-A **
23831330-C-T 21669444-C-T **
17363192-C-A 15251312-C-A **
14609666-G-A 12497868-G-A **
16602739-C-A 14490859-C-A **
2750863-C-A 2882822-C-A **
11654604-G-T **
4208337-C-A 4340296-C-A **
21515787-C-T 19353901-C-T **
14035024-C-A 11914318-C-A **
2689614-C-A 2821573-C-A **
2697439-A-G 2829398-A-G **
2745002-G-T 2876961-G-T **
2774726-G-T 2906685-G-T **
2858903-C-A 2990862-C-A **
2885562-G-T 3017521-G-T **
2928125-G-T 3060084-G-T **
2928228-T-A 3060187-T-A **
2990236-G-A 3122195-G-A **
3055946-T-C 3187905-T-C **
3057432-C-A 3189391-C-A **
3093327-C-A 3225286-C-A **
3122676-T-G 3254635-T-G **
3122722-T-G 3254681-T-G **
3179090-G-A 3311049-G-A **
3224464-G-T 3356423-G-T **
3275549-G-T 3407508-G-T **
3346357-C-A 3478316-C-A **
3361815-C-A 3493774-C-A **
3414535-C-A 3546494-C-A **
3437072-T-C 3569031-T-C **
3530265-G-T 3662224-G-T **
3550552-A-T 3682511-A-T **
3550564-A-AT 3682523-A-AT **
3550568-A-AT 3682527-A-AT **
3550578-A-C 3682537-A-C **
3550581-A-G 3682540-A-G **
3592692-C-A 3724651-C-A **
3640705-C-T 3772664-C-T **
3646054-C-A 3778013-C-A **
3646108-C-A 3778067-C-A **
3654653-G-T 3786612-G-T **
3659119-C-T 3791078-C-T **
3753747-G-T 3885706-G-T **
3817338-C-A 3949297-C-A **
3834690-A-G 3966649-A-G **
3876955-G-T 4008914-G-T **
3979069-G-T 4111028-G-T **
3990574-G-A 4122533-G-A **
3990583-T-A 4122542-T-A **
3990588-C-T 4122547-C-T **
3990597-C-T 4122556-C-T **
3992213-C-A 4124172-C-A **
4081946-C-A 4213905-C-A **
4081949-T-A 4213908-T-A **
4081953-G-T 4213912-G-T **
4087826-A-G 4219785-A-G **
4094938-A-T 4226897-A-T **
4114739-G-A 4246698-G-A **
4201681-A-T 4333640-A-T **
4201688-A-C 4333647-A-C **
4201705-C-A 4333664-C-A **
4208231-C-T 4340190-C-T **
4208283-T-C 4340242-T-C **
4208323-A-C 4340282-A-C **
4224434-C-A 4356393-C-A **
4241879-C-G 4373838-C-G **
4416686-G-A 4548645-G-A **
4416699-C-A 4548658-C-A **
4416761-G-A 4548720-G-A **
4416777-A-C 4548736-A-C **
4504710-C-G 4636669-C-G **
4504733-A-T 4636692-A-T **
4508767-G-A 4640726-G-A **
4521600-A-G 4653559-A-G **
4533649-GA-G 4665608-GA-G **
4566874-G-T 4698833-G-T **
4604944-C-A 4736903-C-A **
4643414-G-T 4775373-G-T **
4756665-T-C 4888624-T-C **
4756703-T-C 4888662-T-C **
4756725-A-C 4888684-A-C **
4757122-T-C 4889081-T-C **
4898844-C-G 5030803-C-G **
4902163-G-T 5034122-G-T FT200594 **
4920942-T-C 5052901-T-C **
4929151-T-C 5061110-T-C **
4962921-C-A 5094880-C-A **
4967847-T-G 5099806-T-G **
4976862-G-T 5108821-G-T **
4989600-C-A 5121559-C-A **
5035705-C-A 5167664-C-A **
5060970-G-T 5192929-G-T **
5075830-C-A 5207789-C-A **
5082586-G-A 5214545-G-A **
5107348-C-A 5239307-C-A **
5107864-T-C 5239823-T-C **
5171556-C-G 5303515-C-G **
5171558-T-G 5303517-T-G **
5171561-G-A 5303520-G-A **
5191352-C-A 5323311-C-A **
5221025-C-A 5352984-C-A **
5221031-C-A 5352990-C-A **
5294579-C-A 5426538-C-A **
5318321-A-T 5450280-A-T **
5393547-G-C 5525506-G-C **
5395042-C-A 5527001-C-A **
5409631-C-T 5541590-C-T **
5421540-C-A 5553499-C-A **
5468304-C-T 5600263-C-T **
5524005-C-A 5655964-C-A **
5570898-A-G 5702857-A-G **
5613507-C-A 5745466-C-A **
5710511-G-T 5842470-G-T FTB69708 **
5710513-A-C 5842472-A-C **
5710541-T-C 5842500-T-C **
5710593-A-T 5842552-A-T **
5775613-A-C 5907572-A-C **
5808222-C-A 5940181-C-A **
5845163-G-T 5977122-G-T **
5924404-A-G 6056363-A-G **
5983812-T-C 6115771-T-C **
6010458-A-T 6142417-A-T **
6010514-T-C 6142473-T-C **
6070006-T-A 6201965-T-A **
6177475-A-AT 6309434-A-AT IR3_Dst **
6293410-T-G 6425369-T-G IR3_Dst **
6310639-T-TA 6442598-T-TA IR3_Dst **
6369083-A-T 6501042-A-T **
6384631-A-G 6516590-A-G **
6454067-C-A 6586026-C-A **
6475313-TTTA-T 6607272-TTTA-T **
6505826-T-G 6637785-T-G **
6505833-T-C 6637792-T-C **
6517116-C-A 6649075-C-A **
6542911-T-A 6674870-T-A **
6542979-G-T 6674938-G-T **
6614633-A-T 6746592-A-T **
6634246-C-A 6766205-C-A **
6684099-T-A 6816058-T-A **
6692907-G-T 6824866-G-T **
6692913-A-T 6824872-A-T **
6755919-C-A 6887878-C-A **
6816574-T-C 6948533-T-C **
6996728-T-C 7128687-T-C **
7113871-T-C 7245830-T-C **
7170047-T-C 7302006-T-C **
7182147-C-A 7314106-C-A **
7236569-G-T 7368528-G-T **
7294615-TG-T 7426574-TG-T **
7307816-C-A 7439775-C-A **
7333041-C-G 7465000-C-G **
7337092-C-A 7469051-C-A **
7385409-T-C 7517368-T-C **
7385629-G-C 7517588-G-C **
7395157-A-G 7527116-A-G **
7433638-G-T 7565597-G-T **
7433648-G-C 7565607-G-C **
7446342-A-G 7578301-A-G **
7621942-C-A 7753901-C-A **
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7755026-G-T 7886985-G-T **
7824720-C-A 7956679-C-A **
7864340-A-G 7996299-A-G **
8057565-C-A 8189524-C-A **
8235480-A-T 8367439-A-T **
8282355-C-A 8414314-C-A **
8369610-C-A 8501569-C-A **
8691929-C-A 8823888-C-A FT327631 **
8732733-C-G 8864692-C-G **
8735243-C-A 8867202-C-A **
8811357-T-G 8943316-T-G **
8849809-C-T 8981768-C-T **
8856101-A-T 8988060-A-T **
9109098-G-T **
9109535-C-A **
9110573-C-A **
9125438-CT-C **
8977053-G-A 9139444-G-A **
9040222-TTG-T 9202613-TTG-T **
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9524345-C-A 9686736-C-A **
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9524353-G-A 9686744-G-A **
9639228-G-T 9801619-G-T IR3_Prx **
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9942864-C-A 10105255-C-A **
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10654071-T-C **
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10688876-C-A **
10744953-CT-C **
10752297-TC-T **
10753455-A-C **
10759556-TC-T **
10767925-C-CTATTG **
10772839-T-G **
10773217-C-A **
10776976-A-C **
10779157-A-G **
10782308-C-A **
10786934-AT-A **
10792248-A-T **
10799998-C-T **
10803492-A-C **
10805921-A-G **
10813212-T-C **
10820728-C-A **
10828026-G-T **
10831860-C-A **
10836825-C-T **
10839425-T-G **
10839470-T-C **
10844398-C-A **
10852157-A-T **
10864463-CCATTT-C **
10864782-C-G **
10865152-A-G **
10865544-C-G **
10866473-A-T **
10868255-A-G FT434783 **
10872016-A-T **
10872018-A-C **
10873288-C-A **
10874777-T-C **
10875330-C-A **
10876850-G-GTGCAT **
10878799-C-T **
10879250-G-T **
10888356-G-C **
10890406-C-A **
10899627-C-T **
10903622-C-T **
10906678-T-G **
10909658-A-T **
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10913810-C-A **
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10934356-C-T **
10936508-A-T **
10944956-C-A **
10948411-C-A **
10949516-T-C **
10951189-T-C FT73591 **
10951201-A-C **
10954496-C-A **
10954501-C-T **
10954535-C-A **
10954540-C-G **
10961195-C-G **
10961250-C-T **
10961317-A-G **
10961333-G-T **
10964039-G-C **
10964056-A-C **
10964059-G-T **
10964091-G-C **
10964172-C-G **
10968624-T-C **
10970653-A-G **
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10974385-A-G **
10976688-T-G **
10978487-G-C **
10983809-C-T **
10985839-C-A **
10987968-C-G **
11011038-C-A **
11013309-C-T **
11013984-C-T **
11014689-A-C **
11018659-T-C **
11020420-A-T **
11021947-A-G **
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13629306-C-T 11473630-C-T **
11654833-A-C **
11663583-A-C **
11663589-A-G **
11667757-T-G **
11667759-C-G **
11667767-T-A **
11667830-A-G **
11669627-A-G **
11675585-T-A **
13804000-G-T 11683294-G-T **
13809565-A-G 11688859-A-G **
13809572-T-A 11688866-T-A **
13880243-G-A 11759537-G-A FTB35981 **
13887534-C-A 11766828-C-A **
13903083-C-A 11782377-C-A **
13909987-C-A 11789281-C-A **
13974136-T-A 11853430-T-A **
13974688-TTC-T 11853982-TTC-T **
13988973-C-A 11868267-C-A **
13996085-C-A 11875379-C-A **
14011376-T-G 11890670-T-G **
14025604-AAGAAAGAGAG-A 11904898-AAGAAAGAGAG-A **
14051822-C-A 11931116-C-A **
14074740-GC-G 11954034-GC-G **
14074860-C-A 11954154-C-A **
14100975-T-G 11980269-T-G **
14163274-G-T 12042568-G-T **
14204836-G-A 12084130-G-A FTB51988 **
14213835-A-G 12093129-A-G **
14229990-C-A 12109284-C-A **
14274143-G-C 12153437-G-C **
14295213-C-A 12174507-C-A **
14395699-T-C 12274995-T-C **
14395741-G-A 12275037-G-A **
14397574-T-G 12276870-T-G **
14427612-A-G 12306887-A-G Y91410 **
14431441-G-A 12310714-G-A **
14458369-T-C 12337642-T-C **
14461187-C-A 12340460-C-A **
14471834-T-A 12351103-T-A **
14518474-C-A 12406675-C-A **
14561472-C-T 12449673-C-T **
14568143-G-C 12456343-G-C **
14609682-A-G 12497884-A-G **
14609728-G-A 12497930-G-A **
14609732-G-A 12497934-G-A **
14609747-T-A 12497949-T-A **
14611522-T-C 12499728-T-C **
14660463-A-C 12548528-A-C **
14685901-C-G 12573967-C-G **
14762403-A-C 12650472-A-C **
14762520-C-A 12650589-C-A **
14785014-C-A 12673084-C-A **
14795013-A-G 12683084-A-G **
14908338-T-A 12796405-T-A **
14908371-T-C 12796438-T-C **
14908372-G-T 12796439-G-T **
14925938-A-T 12814003-A-T **
14926458-G-C 12814523-G-C **
14960515-G-T 12848590-G-T **
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15423270-T-C 13311390-T-C **
15423293-G-A 13311413-G-A **
15435198-C-A 13323318-C-A **
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15683615-C-G 13571735-C-G **
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15746016-C-T 13634136-C-T **
15746267-C-A 13634387-C-A **
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15761984-A-G 13650104-A-G **
15761995-A-G 13650115-A-G **
15762003-C-CA 13650123-C-CA **
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15860291-C-A 13748411-C-A **
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15866028-T-A 13754148-T-A **
15903956-C-A 13792076-C-A **
15921760-G-C 13809880-G-C **
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16210967-T-G 14099087-T-G **
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17372310-C-A 15260430-C-A **
17374705-T-A 15262825-T-A **
17502698-C-T 15390818-C-T **
17518716-G-T 15406836-G-T **
17840102-C-A 15728222-C-A **
17849017-A-G 15737137-A-G **
17967869-G-T 15855989-G-T **
17992507-T-C 15880627-T-C P7_Prx **
17992533-A-AG 15880653-A-AG P7_Prx **
18086241-C-A 15974361-C-A **
18226346-A-G 16114466-A-G **
18241881-C-A 16130001-C-A **
18263855-T-A 16151975-T-A **
18499940-A-G 16388060-A-G P6_Dst **
18585728-C-A 16473848-C-A **
18651217-C-A 16539337-C-A Y102324 **
18750010-C-A 16638130-C-A **
18819268-A-T 16707388-A-T **
18873990-C-A 16762110-C-A Y102921 **
18879911-C-A 16768031-C-A **
18895701-T-A 16783821-T-A **
18915338-A-G 16803458-A-G **
18980334-A-T 16868454-A-T Y103241 **
19112481-C-A 17000601-C-A **
19112506-T-C 17000626-T-C **
19122029-C-A 17010149-C-A **
19226539-A-G 17114659-A-G **
19303337-G-T 17191457-G-T **
19356368-G-T 17244488-G-T **
19429209-C-A 17317329-C-A **
19460087-G-C 17348207-G-C **
19462041-G-T 17350161-G-T S5936 **
19476511-A-C 17364631-A-C **
19532688-A-T 17420808-A-T **
19532715-C-T 17420835-C-T **
19532720-C-T 17420840-C-T **
19536795-C-A 17424915-C-A **
19546405-A-G 17434525-A-G FTA20073 **
19842127-A-C 17730247-A-C P5_Prx **
20022503-C-G 17910623-C-G P5_Prx **
20022539-T-G 17910659-T-G P5_Prx **
20101689-T-A 17989809-T-A P5_Dst **
20579316-A-G 18417430-A-G P5_Dst **
20579347-C-CGAAG 18417461-C-CGAAG P5_Dst **
20579354-A-T 18417468-A-T P5_Dst **
20669302-GTTG-T 18507416-GTTG-T P4_Prx **
20832400-A-G 18670514-A-G P4_Gap **
20959440-T-TC 18797554-T-TC P4_Dst **
21018973-A-AC 18857087-A-AC P4_Dst **
21095744-T-C 18933858-T-C **
21153748-C-A 18991862-C-A **
21211310-AAAC-A 19049424-AAAC-A **
21268997-G-A 19107111-G-A **
21321865-A-G 19159979-A-G **
21368381-C-A 19206495-C-A **
21386983-G-T 19225097-G-T **
21457790-A-G 19295904-A-G **
21515710-A-AAAACAAACAAACAT 19353824-A-AAAACAAACAAACAT **
21515742-A-G 19353856-A-G **
21515769-A-G 19353883-A-G **
21515778-A-C 19353892-A-C **
21515779-C-T 19353893-C-T **
21708990-CA-C 19547104-CA-C **
21770111-C-A 19608225-C-A **
21787373-C-A 19625487-C-A **
21830952-G-T 19669066-G-T **
21831007-T-C 19669121-T-C **
21831019-A-C 19669133-A-C **
21874883-A-G 19712997-A-G **
21990418-A-T 19828532-A-T **
21990440-A-G 19828554-A-G **
22051190-G-A 19889304-G-A **
22077090-C-A 19915204-C-A **
22113766-A-T 19951880-A-T **
22135781-A-G 19973895-A-G **
22198782-C-A 20036896-C-A **
22211991-G-A 20050105-G-A **
22240903-T-A 20079017-T-A DYZ19 **
22537013-G-T 20375127-G-T **
22537019-G-C 20375133-G-C **
22592230-C-A 20430344-C-A **
22713826-C-A 20551940-C-A Y109541 **
22739647-C-A 20577761-C-A **
22781364-A-T 20619478-A-T **
22868999-C-A 20707113-C-A **
22871703-T-A 20709817-T-A **
22871707-G-A 20709821-G-A **
22871874-G-T 20709988-G-T Y110012 **
22884977-C-T 20723091-C-T **
22963563-A-C 20801677-A-C **
22963578-G-A 20801692-G-A **
22989149-A-T 20827263-A-T **
23019545-G-T 20857659-G-T **
23048238-G-A 20886352-G-A **
23098815-TCAAAAAA-T 20936929-TCAAAAAA-T **
23102698-C-T 20940812-C-T **
23252635-G-T 21090749-G-T **
23276753-C-T 21114867-C-T **
23276882-T-C 21114996-T-C **
23276883-C-A 21114997-C-A **
23440435-C-A 21278549-C-A **
23512513-C-A 21350627-C-A **
23512686-C-T 21350800-C-T **
23600004-T-C 21438118-T-C **
23625408-A-G 21463522-A-G **
23773858-G-T 21611972-G-T **
23831280-AGA-G 21669394-AGA-G **
23831337-G-A 21669451-G-A **
23831353-C-T 21669467-C-T **
23831370-C-T 21669484-C-T **
23831402-G-T 21669516-G-T **
23997139-G-T 21850992-G-T **
23997149-T-C 21851002-T-C FTA9054 **
23997152-A-G 21851005-A-G **
23997154-A-G 21851007-A-G **
24074202-C-T 21928055-C-T P3_b1 **
24250894-A-ACC 22104747-A-ACC P3_b1 **
24262037-G-T 22115890-G-T P3_b1 **
24403257-G-T 22257110-G-T **
24407652-A-G 22261505-A-G **
24407670-C-T 22261523-C-T **
24512351-C-A 22366204-C-A **
24597833-T-G 22451686-T-G P3_t2 **
24597956-C-T 22451809-C-T P3_t2 **
24751230-A-T 22605083-A-T P3_b2 **
24841309-G-T 22695162-G-T IR1_R **
24841474-T-G 22695327-T-G IR1_R **
25246599-G-T 23100452-G-T P2_r1 **
25395837-A-T 23249690-A-T P2_r2 **
25651634-C-A 23505487-C-A P1_b3 **
25733051-TA-T 23586904-TA-T P1_b3 **
25733070-A-C 23586923-A-C P1_b3 **
25929233-T-A 23783086-T-A P1_Y1 **
26061012-G-A 23914865-G-A P1_Y1 **
26061084-G-T 23914937-G-T P1_Y1 **
26061099-G-C 23914952-G-C P1_Y1 **
26260635-A-T 24114488-A-T P1_Y1 **
27637347-C-T 25491200-C-T P1_Y2 **
27791847-T-G 25645700-T-G P1_Y2 **
27932697-T-C 25786550-T-C P1_Y2 **
28429545-A-G 26283398-A-G P1_gr2 **
28462217-T-G 26316070-T-G **
28462225-A-G 26316078-A-G **
28505257-C-A 26359110-C-A **
28544446-C-A 26398299-C-A **
28547470-T-C 26401323-T-C **
28549867-C-A 26403720-C-A **
28552453-G-T 26406306-G-T **
28584007-C-A 26437860-C-A **
28589332-A-G 26443185-A-G **
28607500-A-G 26461353-A-G **
28625820-G-T 26479673-G-T **
28627259-C-T 26481112-C-T **
28627260-A-G 26481113-A-G FT285107 **
28640509-C-A 26494362-C-A **
28701988-T-C 26555841-T-C **
28702097-T-A 26555950-T-A **
28721518-G-GA 26575371-G-GA **
28815231-A-G 26669084-A-G **
56841336-G-T **
56845231-A-T **
56851931-T-G **
56860585-C-T **
6256-T-G **
35475-G-T **
22260699-G-T 20098813-G-T DYZ19 ***
10015087-T-G 10177478-T-G ***
10015084-T-C 10177475-T-C ***
10034287-C-A 10196678-C-A ***
10034293-T-C 10196684-T-C ***
2686642-C-A 2818601-C-A S8198 ***
13437307-A-G 11281631-A-G ***
14747948-C-T 12636017-C-T ***
22303670-G-T 20141784-G-T DYZ19 ***
22435809-G-A 20273923-G-A DYZ19 ***
9991909-G-A 10154300-G-A ***
9991871-C-T 10154262-C-T ***
13468149-T-A,G 11312473-T-A,G ***
13865518-T-G 11744812-T-G ***
13865525-G-T 11744819-G-T ***
17515582-T-A 15403702-T-A BY115391 ***
10034245-A-G 10196636-A-G ***
24220218-G-A 22074071-G-A P3_b1 ***
13865533-T-G 11744827-T-G ***
9991876-GT-G 10154267-GT-G ***
10014494-A-G 10176885-A-G ***
19997077-A-T 17885197-A-T P5_Prx ***
20698239-A-C 18536353-A-C P4_Prx ***
22259829-G-T 20097943-G-T DYZ19 ***
22266921-G-C 20105035-G-C DYZ19 ***
22312415-G-C 20150529-G-C DYZ19 ***
22317840-C-T 20155954-C-T DYZ19 ***
22325927-C-G 20164041-C-G DYZ19 ***
22325993-G-C 20164107-G-C DYZ19 ***
22422673-C-A 20260787-C-A DYZ19 ***
25036045-G-A 22889898-G-A g1 ***
25167694-T-C 23021547-T-C g1 ***
25303028-A-C 23156881-A-C P2_r1 ***
25349232-C-T 23203085-C-T P2_r1 ***
16545414-CAAAAAAAAAAA-C 14433534-CAAAAAAAAAAA-C 24×A***
10885223-A-G ***
15449891-C-A 13338011-C-A ***
10885270-CCATTG-C ***
10884494-ATCCAC-A ***
10798204-A-C ***
10798207-TTTTCA-T ***
10885258-T-G ***
13907791-C-A 11787085-C-A ***
10888675-C-A ***
14969115-C-T 12857190-C-T ***
10835743-T-A ***
5214388-G-A 5346347-G-A FT323117 ***
10885238-T-A ***
3593067-C-A 3725026-C-A ***
17960990-G-A 15849110-G-A ***
13461033-C-T 11305357-C-T ***
3680532-C-A 3812491-C-A ***
7886530-G-T 8018489-G-T ***
8835361-A-T 8967320-A-T ***
9973223-C-A 10135614-C-A ***
10690831-C-A ***
10749427-C-A FT429526 ***
10749996-C-G ***
10780672-T-C ***
10781228-A-G,T ***
10782950-GCATTC-G ***
10791202-A-T ***
10868437-C-A ***
10868792-C-A ***
10885206-C-A ***
10885230-C-T ***
10885255-C-A ***
10888150-T-C ***
10888665-T-A ***
10888689-A-T ***
10888695-C-G ***
10937694-A-C,T ***
10987147-CACTCGACTAC-C,CACTCCACT ***
10988463-A-G ***
11005082-C-A ***
11021544-T-C ***
15192717-C-A 13080803-C-A FTA11035 ***
15982187-G-A 13870307-G-A ***
16745089-C-A 14633209-C-A ***
21551825-G-T 19389939-G-T ***
21766533-AATATATAT-A,AATATAT 19604647-AATATATAT-A,AATATAT 19×AT***
22974305-A-G 20812419-A-G ***
23577010-C-A 21415124-C-A ***
24416978-C-A 22270831-C-A ***
24485715-A-T 22339568-A-T ***
26275988-C-A 24129841-C-A P1_Y1 ***
56861730-T-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.