MacKinlay
FTDNA: 671978, BigY2: 671978Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 671978 | BigY2 671978 |
---|---|---|---|---|---|---|---|---|---|
28816704-C-A | 26670557-C-A | A* | |||||||
22304603-A-C | 20142717-A-C | DYZ19 | A* | ||||||
14787760-A-G | 12675830-A-G | BY23854 | Y | Y | + | + | |||
15190275-C-A | 13078361-C-A | BY100079 | Y | Y | + | + | |||
16879232-C-CA | 14767352-C-CA | + | + | ||||||
17435727-A-G | 15323847-A-G | BY114764 | Y | Y | + | + | |||
18712255-T-C | 16600375-T-C | BY123323 | Y | Y | + | + | |||
22444690-G-C | 20282804-G-C | FT456875 | DYZ19 | + | + | ||||
9745457-C-T | 9907848-C-T | BY80735 | + | + | |||||
8730664-C-T | 8862623-C-T | BY75507 | Y | Y | + | + | |||
8164808-C-T | 8296767-C-T | BY70435 | Y | Y | + | + | |||
13717165-G-T | 11561489-G-T | BY89706 | *** | + | |||||
15436258-T-C | 13324378-T-C | BY101553 | Y | Y | + | + | |||
15416829-T-C | 13304949-T-C | BY101440 | Y | Y | + | + | |||
11669514-G-T | ** | ||||||||
13721293-A-C | 11565617-A-C | ** | |||||||
14425078-C-A | 12304353-C-A | ** | |||||||
14490784-C-A | 12370053-C-A | ** | |||||||
11651526-C-A | ** | ||||||||
12374435-C-A | ** | ||||||||
11645435-A-C | ** | ||||||||
13726371-A-T | 11570695-A-T | ** | |||||||
14530540-T-A | 12418741-T-A | ** | |||||||
14554964-C-A | 12443165-C-A | ** | |||||||
14274066-A-G | 12153360-A-G | ** | |||||||
14671752-G-T | 12559818-G-T | ** | |||||||
14674127-T-G | 12562193-T-G | ** | |||||||
13710030-A-C | 11554354-A-C | ** | |||||||
13708781-A-G | 11553105-A-G | ** | |||||||
14711940-C-A | 12600007-C-A | FT245990 | ** | ||||||
13708743-T-G | 11553067-T-G | ** | |||||||
13708717-A-C | 11553041-A-C | ** | |||||||
13698674-A-T | 11542998-A-T | ** | |||||||
14295563-C-A | 12174857-C-A | ** | |||||||
14225561-T-A | 12104855-T-A | ** | |||||||
11663541-C-A | ** | ||||||||
13935967-C-A | 11815261-C-A | ** | |||||||
11675371-C-A | ** | ||||||||
13809854-G-T | 11689148-G-T | ** | |||||||
13899062-G-A | 11778356-G-A | ** | |||||||
13903192-C-A | 11782486-C-A | ** | |||||||
13910035-C-A | 11789329-C-A | ** | |||||||
13911289-C-A | 11790583-C-A | ** | |||||||
13932841-A-T | 11812135-A-T | ** | |||||||
13963824-ATTTTTTTTTTTTTT-A | 11843118-ATTTTTTTTTTTTTT-A | 49×T | ** | ||||||
14196250-A-C | 12075544-A-C | ** | |||||||
13969215-C-A | 11848509-C-A | ** | |||||||
13975037-C-T | 11854331-C-T | ** | |||||||
11662865-A-C | ** | ||||||||
13993733-T-C | 11873027-T-C | ** | |||||||
14012393-G-T | 11891687-G-T | ** | |||||||
11654744-G-T | ** | ||||||||
14122780-C-A | 12002074-C-A | ** | |||||||
14142194-T-G | 12021488-T-G | ** | |||||||
13986197-T-G | 11865491-T-G | ** | |||||||
14793018-C-A | 12681089-C-A | ** | |||||||
14724622-C-A | 12612690-C-A | ** | |||||||
16425676-G-T | 14313796-G-T | ** | |||||||
16110426-A-T | 13998546-A-T | P8_Prx | ** | ||||||
16110428-C-A | 13998548-C-A | P8_Prx | ** | ||||||
16170335-A-T | 14058455-A-T | ** | |||||||
16177004-A-AT | 14065124-A-AT | ** | |||||||
16241039-C-A | 14129159-C-A | ** | |||||||
16241539-A-C | 14129659-A-C | ** | |||||||
16270872-G-T | 14158992-G-T | ** | |||||||
16319307-G-T | 14207427-G-T | ** | |||||||
16353629-C-A | 14241749-C-A | ** | |||||||
16426564-C-A | 14314684-C-A | ** | |||||||
16110401-C-A | 13998521-C-A | P8_Prx | ** | ||||||
16430889-A-T | 14319009-A-T | ** | |||||||
16474752-C-A | 14362872-C-A | ** | |||||||
16605065-C-G | 14493185-C-G | ** | |||||||
16652157-T-A | 14540277-T-A | ** | |||||||
16652182-TA-T | 14540302-TA-T | 8×A | ** | ||||||
16675734-A-C | 14563854-A-C | ** | |||||||
16720543-T-C | 14608663-T-C | ** | |||||||
16886457-T-A | 14774577-T-A | ** | |||||||
17030727-C-A | 14918847-C-A | ** | |||||||
16110402-A-T | 13998522-A-T | P8_Prx | ** | ||||||
16110396-G-T | 13998516-G-T | P8_Prx | ** | ||||||
14724731-T-G | 12612799-T-G | ** | |||||||
15676966-T-C | 13565086-T-C | ** | |||||||
13698653-G-T | 11542977-G-T | ** | |||||||
15066174-C-A | 12954266-C-A | ** | |||||||
15202299-C-A | 13090385-C-A | ** | |||||||
15290041-A-C | 13178140-A-C | ** | |||||||
15299448-T-A | 13187547-T-A | ** | |||||||
15323604-C-A | 13211722-C-A | ** | |||||||
15380456-G-T | 13268576-G-T | ** | |||||||
15399191-C-G | 13287311-C-G | ** | |||||||
15629781-G-T | 13517901-G-T | ** | |||||||
15758950-C-A | 13647070-C-A | ** | |||||||
16110389-C-A | 13998509-C-A | P8_Prx | ** | ||||||
15775128-C-A | 13663248-C-A | ** | |||||||
15892548-G-T | 13780668-G-T | ** | |||||||
15921450-C-A | 13809570-C-A | ** | |||||||
16000090-G-T | 13888210-G-T | ** | |||||||
16003673-G-T | 13891793-G-T | ** | |||||||
16015003-C-A | 13903123-C-A | ** | |||||||
16038974-T-G | 13927094-T-G | ** | |||||||
16107443-T-G | 13995563-T-G | P8_Prx | ** | ||||||
16110385-C-G | 13998505-C-G | P8_Prx | ** | ||||||
13698655-A-T | 11542979-A-T | ** | |||||||
31520-T-G | ** | ||||||||
13695569-A-T | 11539893-A-T | ** | |||||||
10932922-T-TTCCAC | ** | ||||||||
10920440-G-T | ** | ||||||||
10920448-C-A | ** | ||||||||
10920471-G-T | ** | ||||||||
10924230-C-A | ** | ||||||||
10927242-G-T | ** | ||||||||
10927261-T-C | ** | ||||||||
10927267-C-T | ** | ||||||||
10930848-T-A | ** | ||||||||
10935255-T-G | ** | ||||||||
10919580-G-T | ** | ||||||||
10940064-CTGCAT-C | ** | ||||||||
10940087-C-T | ** | ||||||||
10940104-C-T | ** | ||||||||
10940340-C-T | ** | ||||||||
10940682-C-A | ** | ||||||||
10943124-C-G | ** | ||||||||
10944327-C-A | ** | ||||||||
10951759-C-T | ** | ||||||||
10951813-T-A | ** | ||||||||
10920439-A-T | ** | ||||||||
10906876-A-T | ** | ||||||||
10954910-T-A | ** | ||||||||
10876040-C-A | ** | ||||||||
10859602-T-G | ** | ||||||||
10859619-C-A | ** | ||||||||
10859621-G-T | FT383957 | ** | |||||||
10862792-C-A | ** | ||||||||
10865635-C-A | ** | ||||||||
10869036-TCCATTCCATC-T | ** | ||||||||
10869054-A-ACTC | ** | ||||||||
10874255-G-T | ** | ||||||||
10876090-C-A | ** | ||||||||
10906146-C-A | ** | ||||||||
10882029-A-G | ** | ||||||||
10883238-C-A | ** | ||||||||
10883245-C-T | ** | ||||||||
10884525-T-A | ** | ||||||||
10885198-A-T | ** | ||||||||
10889628-T-A | ** | ||||||||
10889864-C-A | ** | ||||||||
10895880-C-G | ** | ||||||||
10898644-T-G | ** | ||||||||
10954318-C-A | ** | ||||||||
10955297-A-ACTCCC | ** | ||||||||
13630636-T-G | 11474960-T-G | ** | |||||||
13361522-G-A | 11205846-G-A | ** | |||||||
11030384-C-A | ** | ||||||||
11036119-CTT-C | ** | ||||||||
11036124-CCAT-C | ** | ||||||||
11038226-T-A | ** | ||||||||
13217196-C-A | 11061520-C-A | ** | |||||||
13237858-A-C | 11082182-A-C | ** | |||||||
13258395-C-A | 11102719-C-A | ** | |||||||
13329591-A-C | 11173915-A-C | ** | |||||||
13445456-T-G | 11289780-T-G | ** | |||||||
11019352-T-G | ** | ||||||||
13460684-C-G | 11305008-C-G | ** | |||||||
13460712-C-G | 11305036-C-G | ** | |||||||
13538930-T-C | 11383254-T-C | ** | |||||||
17088209-G-A | 14976329-G-A | ** | |||||||
13554037-C-A | 11398361-C-A | ** | |||||||
13588410-A-C | 11432734-A-C | ** | |||||||
13605881-G-T | 11450205-G-T | ** | |||||||
13617874-C-A | 11462198-C-A | ** | |||||||
13630598-A-T | 11474922-A-T | ** | |||||||
11027070-A-T | ** | ||||||||
11014094-T-C | ** | ||||||||
10957810-T-G | ** | ||||||||
10982953-T-G | ** | ||||||||
10959408-C-G | ** | ||||||||
10959416-C-G | ** | ||||||||
10963151-T-G | ** | ||||||||
10973525-T-A | ** | ||||||||
10973953-C-G | ** | ||||||||
10979156-C-A | ** | ||||||||
10979981-A-T | ** | ||||||||
10982625-C-A | ** | ||||||||
10983439-T-C | FT439163 | ** | |||||||
11007248-C-A | ** | ||||||||
10986577-T-A | ** | ||||||||
10986588-T-A | ** | ||||||||
10989601-T-G | ** | ||||||||
10993988-A-T | ** | ||||||||
10993990-C-T | ** | ||||||||
10994009-T-A | ** | ||||||||
10999120-T-G | ** | ||||||||
11001677-G-T | ** | ||||||||
11004369-C-CCACAG | ** | ||||||||
17038776-C-A | 14926896-C-A | ** | |||||||
17644295-T-G | 15532415-T-G | ** | |||||||
17136917-C-T | 15025037-C-T | ** | |||||||
26141360-A-T | 23995213-A-T | P1_Y1 | ** | ||||||
25966258-T-A | 23820111-T-A | P1_Y1 | ** | ||||||
25972190-C-A | 23826043-C-A | P1_Y1 | ** | ||||||
25974650-C-A | 23828503-C-A | P1_Y1 | ** | ||||||
26054536-GA-G | 23908389-GA-G | P1_Y1 | ** | ||||||
26135634-C-T | 23989487-C-T | P1_Y1 | ** | ||||||
26141321-T-G | 23995174-T-G | P1_Y1 | ** | ||||||
26141324-A-C | 23995177-A-C | P1_Y1 | ** | ||||||
26141334-A-C | 23995187-A-C | P1_Y1 | ** | ||||||
26141373-A-C | 23995226-A-C | P1_Y1 | ** | ||||||
25913592-T-A | 23767445-T-A | P1_Y1 | ** | ||||||
26377889-C-A | 24231742-C-A | P1_Y1 | ** | ||||||
27499340-AGAAATC-A | 25353193-AGAAATC-A | P1_Y2 | ** | ||||||
27872501-T-A | 25726354-T-A | P1_Y2 | ** | ||||||
27996074-G-T | 25849927-G-T | P1_Y2 | ** | ||||||
28006411-T-A | 25860264-T-A | P1_Y2 | ** | ||||||
28006413-C-A | 25860266-C-A | P1_Y2 | ** | ||||||
28006426-G-T | 25860279-G-T | P1_Y2 | ** | ||||||
28006431-G-T | 25860284-G-T | P1_Y2 | ** | ||||||
25913593-T-A | 23767446-T-A | P1_Y1 | ** | ||||||
25899328-C-G | 23753181-C-G | P1_Y1 | ** | ||||||
28234319-A-T | 26088172-A-T | P1_b4 | ** | ||||||
24363894-A-G | 22217747-A-G | ** | |||||||
23337365-A-C | 21175479-A-C | ** | |||||||
23337366-A-C | 21175480-A-C | ** | |||||||
23360690-C-A | 21198804-C-A | ** | |||||||
23655431-A-T | 21493545-A-T | ** | |||||||
23838610-A-C | 21676724-A-C | ** | |||||||
23848212-A-C | 21686326-A-C | ** | |||||||
23848536-C-A | 21686650-C-A | ** | |||||||
24047567-G-T | 21901420-G-T | ** | |||||||
24407471-C-A | 22261324-C-A | ** | |||||||
24890839-G-T | 22744692-G-T | g1 | ** | ||||||
24407474-A-T | 22261327-A-T | ** | |||||||
24407528-G-T | 22261381-G-T | ** | |||||||
24541893-C-A | 22395746-C-A | P3_t2 | ** | ||||||
24541923-T-A | 22395776-T-A | P3_t2 | ** | ||||||
24541937-C-A | 22395790-C-A | P3_t2 | ** | ||||||
24600695-T-G | 22454548-T-G | P3_t2 | ** | ||||||
24639663-A-T | 22493516-A-T | P3_t2 | ** | ||||||
24869973-C-A | 22723826-C-A | IR1_R | ** | ||||||
24870023-C-A | 22723876-C-A | IR1_R | ** | ||||||
28234308-T-G | 26088161-T-G | P1_b4 | ** | ||||||
28401909-C-A | 26255762-C-A | P1_gr2 | ** | ||||||
23306004-T-A | 21144118-T-A | ** | |||||||
56838675-C-A | ** | ||||||||
28794271-T-A | 26648124-T-A | ** | |||||||
28797053-G-T | 26650906-G-T | ** | |||||||
28797066-G-T | 26650919-G-T | ** | |||||||
28812530-A-T | 26666383-A-T | ** | |||||||
28818980-A-T | 26672833-A-T | ** | |||||||
28819278-A-G | 26673131-A-G | ** | |||||||
56728173-G-T | ** | ||||||||
56763499-A-T | ** | ||||||||
56841511-T-C | ** | ||||||||
28730255-G-T | 26584108-G-T | ** | |||||||
56844851-A-T | ** | ||||||||
56847687-A-T | ** | ||||||||
56847695-C-A | ** | ||||||||
56848838-CA-C | ** | ||||||||
56854428-A-G | ** | ||||||||
56858669-C-A | ** | ||||||||
56873166-A-T | ** | ||||||||
6910-A-G | ** | ||||||||
31513-A-T | ** | ||||||||
28771725-T-A | 26625578-T-A | ** | |||||||
28720132-C-A | 26573985-C-A | 24×T | ** | ||||||
28441865-T-G | 26295718-T-G | P1_gr2 | ** | ||||||
28542329-T-G | 26396182-T-G | ** | |||||||
28474784-G-A | 26328637-G-A | ** | |||||||
28475464-C-A | 26329317-C-A | ** | |||||||
28477310-C-A | 26331163-C-A | ** | |||||||
28477471-C-A | 26331324-C-A | ** | |||||||
28483578-C-A | 26337431-C-A | ** | |||||||
28485883-G-T | 26339736-G-T | FT240956 | FT244477 | ** | |||||
28518912-C-A | 26372765-C-A | ** | |||||||
28529731-T-A | 26383584-T-A | ** | |||||||
28548949-G-T | 26402802-G-T | ** | |||||||
28663589-C-A | 26517442-C-A | ** | |||||||
28593465-A-C | 26447318-A-C | ** | |||||||
28593549-A-C | 26447402-A-C | ** | |||||||
28609273-C-A | 26463126-C-A | ** | |||||||
28610353-C-A | 26464206-C-A | ** | |||||||
28610361-C-A | 26464214-C-A | ** | |||||||
28610364-A-T | 26464217-A-T | ** | |||||||
28610380-T-A | 26464233-T-A | ** | |||||||
28625273-G-T | 26479126-G-T | ** | |||||||
28627288-A-C | 26481141-A-C | ** | |||||||
23337270-T-G | 21175384-T-G | ** | |||||||
23285379-C-A | 21123493-C-A | ** | |||||||
17210911-A-T | 15099031-A-T | ** | |||||||
19071844-C-A | 16959964-C-A | ** | |||||||
18701998-T-A | 16590118-T-A | ** | |||||||
18730767-C-A | 16618887-C-A | ** | |||||||
18735674-CTTTT-C | 16623794-CTTTT-C | 24×T | ** | ||||||
18795095-C-A | 16683215-C-A | ** | |||||||
18859602-T-A | 16747722-T-A | ** | |||||||
18988902-C-A | 16877022-C-A | ** | |||||||
19016971-A-T | 16905091-A-T | ** | |||||||
19055578-A-T | 16943698-A-T | ** | |||||||
19125532-A-G | 17013652-A-G | ** | |||||||
18627478-C-A | 16515598-C-A | ** | |||||||
19125535-A-T | 17013655-A-T | ** | |||||||
19138749-A-T | 17026869-A-T | ** | |||||||
19246822-A-C | 17134942-A-C | ** | |||||||
19250103-T-G | 17138223-T-G | ** | |||||||
19301870-G-T | 17189990-G-T | ** | |||||||
19312393-C-A | 17200513-C-A | ** | |||||||
19339968-A-ATT | 17228088-A-ATT | 13×T | ** | ||||||
19464045-G-T | 17352165-G-T | ** | |||||||
18682738-C-A | 16570858-C-A | ** | |||||||
18625002-G-T | 16513122-G-T | ** | |||||||
19551830-C-A | 17439950-C-A | ** | |||||||
17724092-C-A | 15612212-C-A | ** | |||||||
17279327-A-C | 15167447-A-C | ** | |||||||
17379904-A-T | 15268024-A-T | ** | |||||||
17490211-C-A | 15378331-C-A | ** | |||||||
17535504-A-T | 15423624-A-T | ** | |||||||
17568152-C-A | 15456272-C-A | ** | |||||||
10859522-T-C | ** | ||||||||
17644327-T-G | 15532447-T-G | ** | |||||||
17664806-G-A | 15552926-G-A | ** | |||||||
17724152-G-C | 15612272-G-C | ** | |||||||
18622165-G-T | 16510285-G-T | ** | |||||||
17883786-T-A | 15771906-T-A | ** | |||||||
17928160-C-A | 15816280-C-A | ** | |||||||
17929081-GA-G | 15817201-GA-G | ** | |||||||
18080414-A-C | 15968534-A-C | ** | |||||||
18187146-C-A | 16075266-C-A | ** | |||||||
18241940-A-G | 16130060-A-G | ** | |||||||
18303634-T-TA | 16191754-T-TA | P6_Prx | ** | ||||||
18577811-T-A | 16465931-T-A | ** | |||||||
18584029-A-G | 16472149-A-G | ** | |||||||
19492288-C-A | 17380408-C-A | ** | |||||||
19552040-C-A | 17440160-C-A | ** | |||||||
23019878-C-A | 20857992-C-A | ** | |||||||
22248622-T-A | 20086736-T-A | DYZ19 | ** | ||||||
21911140-T-G | 19749254-T-G | ** | |||||||
21922106-A-C | 19760220-A-C | ** | |||||||
21935163-C-A | 19773277-C-A | ** | |||||||
21955004-C-A | 19793118-C-A | ** | |||||||
21963812-T-G | 19801926-T-G | ** | |||||||
22080970-A-C | 19919084-A-C | ** | |||||||
22155449-C-A | 19993563-C-A | ** | |||||||
22248613-T-A | 20086727-T-A | DYZ19 | ** | ||||||
22248627-T-A | 20086741-T-A | DYZ19 | ** | ||||||
21587994-A-C | 19426108-A-C | ** | |||||||
22248644-G-T | 20086758-G-T | DYZ19 | ** | ||||||
22422857-C-A | 20260971-C-A | DYZ19 | ** | ||||||
22535974-A-T | 20374088-A-T | ** | |||||||
22641659-C-A | 20479773-C-A | ** | |||||||
22782733-A-C | 20620847-A-C | ** | |||||||
22799609-T-A | 20637723-T-A | ** | |||||||
22851521-C-A | 20689635-C-A | ** | |||||||
22885116-C-A | 20723230-C-A | ** | |||||||
22916981-T-G | 20755095-T-G | ** | |||||||
21850128-G-T | 19688242-G-T | ** | |||||||
21582464-G-T | 19420578-G-T | ** | |||||||
19586696-T-TG | 17474816-T-TG | P5_Prx | ** | ||||||
20314000-G-T | 18152114-G-T | P5_Dst | ** | ||||||
19758923-G-T | 17647043-G-T | P5_Prx | ** | ||||||
19758930-G-T | 17647050-G-T | P5_Prx | ** | ||||||
19758938-A-T | 17647058-A-T | P5_Prx | ** | ||||||
19781525-T-G | 17669645-T-G | P5_Prx | ** | ||||||
19792673-T-TA | 17680793-T-TA | P5_Prx | ** | ||||||
19827422-A-C | 17715542-A-C | P5_Prx | ** | ||||||
19949582-T-G | 17837702-T-G | P5_Prx | ** | ||||||
20062614-T-TC | 17950734-T-TC | P5_Prx | ** | ||||||
20314016-T-A | 18152130-T-A | P5_Dst | ** | ||||||
21247908-C-A | 19086022-C-A | ** | |||||||
20314020-T-A | 18152134-T-A | P5_Dst | ** | ||||||
20314036-G-T | 18152150-G-T | P5_Dst | ** | ||||||
20359444-G-T | 18197558-G-T | P5_Dst | ** | ||||||
20500932-A-C | 18339046-A-C | P5_Dst | ** | ||||||
21056220-G-T | 18894334-G-T | ** | |||||||
21107342-G-A | 18945456-G-A | FT97038 | ** | ||||||
21107431-G-T | 18945545-G-T | ** | |||||||
21149578-TTAGG-T | 18987692-TTAGG-T | ** | |||||||
21153739-A-T | 18991853-A-T | ** | |||||||
10859524-C-T | ** | ||||||||
10845620-C-A | ** | ||||||||
10847592-A-C | ** | ||||||||
5999476-C-A | 6131435-C-A | ** | |||||||
23350624-G-A | 21188738-G-A | ** | |||||||
22422863-A-T | 20260977-A-T | DYZ19 | ** | ||||||
56876096-C-A | ** | ||||||||
4094997-C-A | 4226956-C-A | ** | |||||||
10754126-G-T | ** | ||||||||
27466713-G-GAAA | 25320566-G-GAAA | P1_Y2 | 21×A | ** | |||||
11003680-T-A | ** | ||||||||
28437293-A-AG | 26291146-A-AG | P1_gr2 | ** | ||||||
10841967-TC-T | ** | ||||||||
10920447-C-A | FT436576 | ** | |||||||
7757129-GT-G | 7889088-GT-G | 9×T | ** | ||||||
13595684-G-T | 11440008-G-T | ** | |||||||
10669374-C-T | ** | ||||||||
18188177-C-A | 16076297-C-A | ** | |||||||
16114249-A-AAT | 14002369-A-AAT | P8_Prx | ** | ||||||
17869652-C-A | 15757772-C-A | ** | |||||||
10973940-C-T | ** | ||||||||
22165201-T-A | 20003315-T-A | ** | |||||||
27499335-A-AT | 25353188-A-AT | P1_Y2 | ** | ||||||
15491941-G-T | 13380061-G-T | 19×TA | ** | ||||||
13708819-C-T | 11553143-C-T | ** | |||||||
17098761-C-A | 14986881-C-A | ** | |||||||
10808953-C-A | ** | ||||||||
11014139-A-C | ** | ||||||||
23455-G-A | ** | ||||||||
10945173-C-T | ** | ||||||||
5426328-C-A | 5558287-C-A | ** | |||||||
10993985-T-C | ** | ||||||||
6930844-C-A | 7062803-C-A | ** | |||||||
10993992-A-C | ** | ||||||||
10994016-C-T | FT439587 | ** | |||||||
10994022-T-G | ** | ||||||||
56844855-A-T | ** | ||||||||
7039859-C-A | 7171818-C-A | ** | |||||||
27570924-C-A | 25424777-C-A | P1_Y2 | ** | ||||||
23786494-C-A | 21624608-C-A | ** | |||||||
16177078-A-C | 14065198-A-C | ** | |||||||
10971970-T-C | ** | ||||||||
56823109-A-C | ** | ||||||||
3229627-T-G | 3361586-T-G | ** | |||||||
2950136-C-A | 3082095-C-A | ** | |||||||
2970708-C-A | 3102667-C-A | ** | |||||||
3011623-C-A | 3143582-C-A | ** | |||||||
3023196-A-C | 3155155-A-C | ** | |||||||
3146720-C-A | 3278679-C-A | ** | |||||||
3146731-T-A | 3278690-T-A | ** | |||||||
3165156-G-T | 3297115-G-T | ** | |||||||
3279461-T-G | 3411420-T-G | ** | |||||||
2856807-GA-T | 2988766-GA-T | ** | |||||||
3279489-T-G | 3411448-T-G | ** | |||||||
3329141-T-C | 3461100-T-C | ** | |||||||
3346213-T-A | 3478172-T-A | ** | |||||||
3366503-C-A | 3498462-C-A | FT349428 | ** | ||||||
3374140-G-T | 3506099-G-T | ** | |||||||
3452204-T-G | 3584163-T-G | ** | |||||||
3454827-G-T | 3586786-G-T | ** | |||||||
2923761-A-C | 3055720-A-C | ** | |||||||
2856493-G-T | 2988452-G-T | ** | |||||||
10781863-C-A | ** | ||||||||
6516629-C-A | 6648588-C-A | ** | |||||||
21617629-T-A | 19455743-T-A | ** | |||||||
3146718-T-A | 3278677-T-A | ** | |||||||
23475649-C-A | 21313763-C-A | ** | |||||||
10693828-C-A | ** | ||||||||
18297877-T-TG | 16185997-T-TG | P6_Prx | ** | ||||||
10793257-C-T | ** | ||||||||
56842022-C-A | ** | ||||||||
10881997-C-T | ** | ||||||||
2856483-T-A | 2988442-T-A | ** | |||||||
10861056-C-A | ** | ||||||||
26146923-A-C | 24000776-A-C | P1_Y1 | ** | ||||||
14530847-A-AAT | 12419048-A-AAT | ** | |||||||
10744608-G-C | ** | ||||||||
10847532-A-C | ** | ||||||||
2745862-TCAAA-T | 2877821-TCAAA-T | ** | |||||||
2785980-TC-T | 2917939-TC-T | ** | |||||||
3550645-C-A | 3682604-C-A | ** | |||||||
10955309-T-A | ** | ||||||||
3501273-A-C | 3633232-A-C | ** | |||||||
11035635-T-G | ** | ||||||||
10794301-T-TTCCAA | ** | ||||||||
15785989-ATT-A | 13674109-ATT-A | 11×T | ** | ||||||
56848846-T-C | ** | ||||||||
7211268-C-A | 7343227-C-A | ** | |||||||
10841931-T-C | ** | ||||||||
10767769-C-T | ** | ||||||||
11035628-C-A | ** | ||||||||
11035639-G-C | ** | ||||||||
19235284-C-A | 17123404-C-A | ** | |||||||
11035644-C-T | ** | ||||||||
28747705-A-ATT | 26601558-A-ATT | 27×T | ** | ||||||
4077693-C-A | 4209652-C-A | ** | |||||||
22882197-A-C | 20720311-A-C | ** | |||||||
10848394-T-G | ** | ||||||||
10940084-T-C | ** | ||||||||
13460699-C-A | 11305023-C-A | ** | |||||||
10794275-A-C | ** | ||||||||
10940323-C-T | ** | ||||||||
14986419-C-A | 12874487-C-A | ** | |||||||
17071135-C-CGAAG | 14959255-C-CGAAG | 5×GAAG | ** | ||||||
9940976-A-T | 10103367-A-T | ** | |||||||
24278461-AAC-A | 22132314-AAC-A | P3_b1 | ** | ||||||
13708771-C-A | 11553095-C-A | ** | |||||||
27902194-A-T | 25756047-A-T | P1_Y2 | ** | ||||||
2772512-CAA-C | 2904471-CAA-C | 25×A | ** | ||||||
13331412-C-A | 11175736-C-A | ** | |||||||
8333620-T-A | 8465579-T-A | ** | |||||||
13708719-T-G | 11553043-T-G | ** | |||||||
10954922-C-A | ** | ||||||||
59002886-CAATA-C | 56856739-CAATA-C | ** | |||||||
24541915-AAAAG-A | 22395768-AAAAG-A | P3_t2 | ** | ||||||
58862694-C-T | 56728177-G-A | ** | |||||||
9847289-ATTTTTTT-A | 10009680-ATTTTTTT-A | 28×T | ** | ||||||
16426620-C-A | 14314740-C-A | ** | ** | ||||||
18398222-T-C | 16286342-T-C | A3434 | P6_Gap | ** | ** | ||||
5521648-C-A | 5653607-C-A | ** | |||||||
10834057-A-T | ** | ||||||||
10972257-C-T | ** | ||||||||
25246445-T-A | 23100298-T-A | P2_r1 | ** | ||||||
28556257-A-T | 26410110-A-T | ** | |||||||
13460743-G-T | 11305067-G-T | ** | |||||||
10673725-C-A | ** | ||||||||
10758593-T-C | ** | ||||||||
10758599-T-C | ** | ||||||||
10832452-T-A | ** | ||||||||
4261915-C-A | 4393874-C-A | ** | |||||||
9669971-G-T | 9832362-G-T | IR3_Prx | ** | ||||||
5186956-C-A | 5318915-C-A | ** | |||||||
13460728-C-T | 11305052-C-T | ** | |||||||
10689175-A-T | ** | ||||||||
10992355-C-A | ** | ||||||||
10689147-C-A | ** | ||||||||
10959285-A-G | ** | ||||||||
26120292-T-A | 23974145-T-A | P1_Y1 | ** | ||||||
11034725-A-T | ** | ||||||||
10927270-C-A | ** | ||||||||
13460729-G-C | 11305053-G-C | ** | |||||||
19739347-A-AACG | 17627467-A-AACG | P5_Prx | ** | ||||||
14986399-C-A | 12874467-C-A | ** | |||||||
11007465-CTTCATTCTAT-C | ** | ||||||||
15221204-C-A | 13109290-C-A | ** | |||||||
14267149-C-A | 12146443-C-A | ** | |||||||
10889635-C-A | ** | ||||||||
10841959-C-T | ** | ||||||||
4389482-C-A | 4521441-C-A | ** | |||||||
5292796-C-A | 5424755-C-A | ** | |||||||
10940331-C-A | ** | ||||||||
10793282-T-A | ** | ||||||||
10982564-TTCATTCCATTCCATTCTACTTCACT-A | ** | ||||||||
10997524-T-G | ** | ||||||||
15177632-C-A | 13065718-C-A | ** | |||||||
56728188-G-A | ** | ||||||||
10927257-G-C | ** | ||||||||
3550698-C-A | 3682657-C-A | ** | |||||||
10759376-TGCA-T | ** | ||||||||
20793542-CA-C | 18631656-CA-C | P4_Prx | ** | ||||||
28006407-G-T | 25860260-G-T | P1_Y2 | ** | ||||||
3491093-C-A | 3623052-C-A | ** | |||||||
14361683-C-A | 12240978-C-A | ** | |||||||
3622304-C-A | 3754263-C-A | ** | |||||||
10685359-T-G | ** | ||||||||
3630389-G-T | 3762348-G-T | ** | |||||||
10655132-T-A | ** | ||||||||
10657422-T-G | ** | ||||||||
10658757-G-T | ** | ||||||||
10667894-C-A | ** | ||||||||
10683342-C-G | ** | ||||||||
10685828-A-T | ** | ||||||||
9824064-A-C | 9986455-A-C | ** | |||||||
10685948-C-A | ** | ||||||||
10689089-A-G | ** | ||||||||
10689098-C-A | ** | ||||||||
10689134-A-T | ** | ||||||||
10744601-C-T | ** | ||||||||
10747785-G-T | ** | ||||||||
10748033-T-TTCCAG | ** | ||||||||
9991333-T-G | 10153724-T-G | ** | |||||||
9765890-A-C | 9928281-A-C | ** | |||||||
10751654-C-A | ** | ||||||||
8790294-C-A | 8922253-C-A | ** | |||||||
7868069-A-C | 8000028-A-C | ** | |||||||
7886503-G-T | 8018462-G-T | ** | |||||||
7924786-A-G | 8056745-A-G | ** | |||||||
8112550-G-T | 8244509-G-T | ** | |||||||
8660358-C-A | 8792317-C-A | FT204130 | ** | ||||||
8661153-A-T | 8793112-A-T | ** | |||||||
8733625-G-T | 8865584-G-T | ** | |||||||
9079605-T-A | 9241996-T-A | ** | |||||||
9765884-T-G | 9928275-T-G | ** | |||||||
9211555-C-A | 9373946-C-A | ** | |||||||
9482349-A-T | 9644740-A-T | ** | |||||||
9618359-G-T | 9780750-G-T | IR3_Prx | ** | ||||||
9694774-A-T | 9857165-A-T | IR3_Prx | ** | ||||||
9694787-T-A | 9857178-T-A | IR3_Prx | ** | ||||||
9694799-C-A | 9857190-C-A | IR3_Prx | ** | ||||||
9694815-C-A | 9857206-C-A | IR3_Prx | ** | ||||||
10749607-C-A | ** | ||||||||
10761551-T-G | ** | ||||||||
7723998-C-A | 7855957-C-A | ** | |||||||
10835749-T-G | ** | ||||||||
10830018-C-A | FT433108 | ** | |||||||
10830020-G-C | ** | ||||||||
10830059-C-T | ** | ||||||||
10830081-G-A | ** | ||||||||
10830083-CCATTG-C | ** | ||||||||
10832453-C-A | ** | ||||||||
10832473-T-C | ** | ||||||||
10838954-C-A | ** | ||||||||
10829339-T-G | ** | ||||||||
10839719-T-G | ** | ||||||||
10841271-C-A | ** | ||||||||
10844472-C-A | ** | ||||||||
10845595-C-T | ** | ||||||||
10845608-C-T | ** | ||||||||
10845623-T-G | ** | ||||||||
10846078-C-A | ** | ||||||||
10830016-T-C | ** | ||||||||
10829334-T-G | ** | ||||||||
10762948-T-G | ** | ||||||||
10787862-C-A | ** | ||||||||
10768762-G-T | ** | ||||||||
10768868-C-T | ** | ||||||||
10769777-A-C | ** | ||||||||
10770103-T-C | ** | ||||||||
10773537-C-A | ** | ||||||||
10776825-C-A | ** | ||||||||
10778897-C-A | ** | ||||||||
10790755-TCTTTA-T | ** | ||||||||
10827614-C-A | ** | ||||||||
10792248-A-G | ** | ||||||||
10793249-C-G | ** | ||||||||
10793269-C-A | ** | ||||||||
10793517-C-A | ** | ||||||||
10799615-C-A | ** | ||||||||
10818489-G-A | ** | ||||||||
10818665-C-T | ** | ||||||||
7861146-A-C | 7993105-A-C | ** | |||||||
10655091-T-G | ** | ||||||||
7572982-A-C | 7704941-A-C | ** | |||||||
5502284-T-A | 5634243-T-A | ** | |||||||
5036893-C-A | 5168852-C-A | ** | |||||||
5112970-C-A | 5244929-C-A | ** | |||||||
5186511-T-A | 5318470-T-A | ** | |||||||
5213927-C-A | 5345886-C-A | ** | |||||||
5213928-T-G | 5345887-T-G | ** | |||||||
7476677-T-A | 7608636-T-A | IR1_L | ** | ||||||
5491909-G-T | 5623868-G-T | ** | |||||||
5502227-C-A | 5634186-C-A | ** | |||||||
5569437-G-T | 5701396-G-T | ** | |||||||
4969307-C-A | 5101266-C-A | ** | |||||||
5593329-C-A | 5725288-C-A | ** | |||||||
5603711-C-A | 5735670-C-A | ** | |||||||
5629026-G-T | 5760985-G-T | ** | |||||||
5650103-G-T | 5782062-G-T | ** | |||||||
5755213-C-A | 5887172-C-A | ** | |||||||
5777109-C-A | 5909068-C-A | ** | |||||||
5809068-A-G | 5941027-A-G | ** | |||||||
5866973-T-G | 5998932-T-G | ** | |||||||
5011523-C-A | 5143482-C-A | ** | |||||||
4957036-T-A | 5088995-T-A | ** | |||||||
5988830-G-T | 6120789-G-T | ** | |||||||
4348162-A-C | 4480121-A-C | ** | |||||||
3696750-T-G | 3828709-T-G | ** | |||||||
3726537-T-A | 3858496-T-A | ** | |||||||
3726552-T-A | 3858511-T-A | ** | |||||||
3743917-A-G | 3875876-A-G | ** | |||||||
3763094-A-AT | 3895053-A-AT | 8×T | ** | ||||||
3951639-T-C | 4083598-T-C | ** | |||||||
4049080-A-C | 4181039-A-C | ** | |||||||
4080584-G-T | 4212543-G-T | ** | |||||||
4368185-A-C | 4500144-A-C | ** | |||||||
4950874-T-G | 5082833-T-G | ** | |||||||
4460707-C-A | 4592666-C-A | ** | |||||||
4558262-G-T | 4690221-G-T | ** | |||||||
4559535-T-A | 4691494-T-A | ** | |||||||
4761293-G-T | 4893252-G-T | ** | |||||||
4792654-C-A | 4924613-C-A | ** | |||||||
4804589-C-A | 4936548-C-A | ** | |||||||
4896251-T-G | 5028210-T-G | ** | |||||||
4929341-C-A | 5061300-C-A | ** | |||||||
5898266-G-T | 6030225-G-T | ** | |||||||
5393447-C-A | 5525406-C-A | ** | |||||||
7186570-A-C | 7318529-A-C | ** | |||||||
6654707-C-A | 6786666-C-A | ** | |||||||
6445240-C-A | 6577199-C-A | ** | |||||||
6461007-A-T | 6592966-A-T | ** | |||||||
6466335-G-T | 6598294-G-T | ** | |||||||
6640459-T-G | 6772418-T-G | ** | |||||||
7142901-C-A | 7274860-C-A | ** | |||||||
7170636-T-A | 7302595-T-A | ** | |||||||
6654717-T-C | 6786676-T-C | ** | |||||||
7139271-G-C | 7271230-G-C | ** | |||||||
6654724-C-A | 6786683-C-A | ** | |||||||
7299475-C-A | 7431434-C-A | ** | |||||||
6654795-A-T | 6786754-A-T | ** | |||||||
6751356-A-C | 6883315-A-C | ** | |||||||
6808149-A-G | 6940108-A-G | ** | |||||||
7295995-T-G | 7427954-T-G | ** | |||||||
6436840-AT-A | 6568799-AT-A | ** | |||||||
7341415-G-A | 7473374-G-A | ** | |||||||
7363862-C-A | 7495821-C-A | ** | |||||||
6259192-A-T | 6391151-A-T | IR3_Dst | ** | ||||||
6009203-A-C | 6141162-A-C | ** | |||||||
6092143-C-A | 6224102-C-A | FT391406 | ** | ||||||
7418569-C-A | 7550528-C-A | ** | |||||||
6369401-G-T | 6501360-G-T | ** | |||||||
6329942-G-T | 6461901-G-T | IR3_Dst | ** | ||||||
6177938-C-A | 6309897-C-A | IR3_Dst | ** | ||||||
6436699-G-T | 6568658-G-T | ** | |||||||
6259207-T-G | 6391166-T-G | IR3_Dst | ** | ||||||
13859361-A-T | 11738655-A-T | *** | |||||||
15480111-ATTTT-A | 13368231-ATTTT-A | 21×T | *** | ||||||
10018359-G-A | 10180750-G-A | *** | |||||||
19416510-G-T | 17304630-G-T | *** | |||||||
13402691-CT-C | 11247015-CT-C | *** | |||||||
19429727-C-A | 17317847-C-A | *** | |||||||
13310679-A-G | 11155003-A-G | *** | |||||||
17264843-CTTATTATTA-C,CTTA | 15152963-CTTATTATTA-C,CTTA | 15×TTA | *** | ||||||
9979655-T-C | 10142046-T-C | *** | |||||||
23425201-G-T | 21263315-G-T | *** | |||||||
10031352-G-C | 10193743-G-C | *** | |||||||
13402662-T-A | 11246986-T-A | *** | |||||||
13323360-G-A | 11167684-G-A | *** | |||||||
13402652-T-C | 11246976-T-C | *** | |||||||
10031354-A-G | 10193745-A-G | *** | |||||||
13828400-G-T | 11707694-G-T | *** | |||||||
10031349-A-G | 10193740-A-G | *** | |||||||
13706510-G-C | 11550834-G-C | BY1009 | *** | ||||||
13322740-C-A | 11167064-C-A | *** | |||||||
13454577-C-A | 11298901-C-A | *** | |||||||
22344085-T-G | 20182199-T-G | DYZ19 | *** | ||||||
13706508-T-G | 11550832-T-G | BY25126 | *** | ||||||
13706502-C-G | 11550826-C-G | BY25125 | *** | ||||||
9944188-G-C | 10106579-G-C | *** | |||||||
13324699-A-C | 11169023-A-C | *** | |||||||
13324741-A-T | 11169065-A-T | *** | |||||||
13310683-T-C | 11155007-T-C | *** | |||||||
18738114-CTTT-C | 16626234-CTTT-C | 19×T | *** | ||||||
11007485-C-T | *** | ||||||||
11007492-C-T | *** | ||||||||
11028115-T-C | *** | ||||||||
10763287-A-ATTACT | *** | ||||||||
10673826-T-A | *** | ||||||||
10689145-C-T | *** | ||||||||
10668962-C-A | *** | ||||||||
10691359-T-C | *** | ||||||||
10984475-T-A | *** | ||||||||
10984473-A-C | *** | ||||||||
17301267-G-T | 15189387-G-T | 8×A | *** | ||||||
10796674-T-C | *** | ||||||||
9865143-G-T | 10027534-G-T | *** | |||||||
11650849-A-G | *** | ||||||||
25229429-G-A | 23083282-G-A | P2_r1 | *** | ||||||
13310685-TTG-T | 11155009-TTG-T | *** | |||||||
24313222-G-A | 22167075-G-A | P3_t1 | *** | ||||||
22449610-G-T | 20287724-G-T | DYZ19 | *** | ||||||
21373616-C-A | 19211730-C-A | *** | |||||||
13324760-C-T | 11169084-C-T | *** | |||||||
13324751-G-C | 11169075-G-C | *** | |||||||
23465797-G-T | 21303911-G-T | *** | |||||||
13324720-A-G | 11169044-A-G | *** | |||||||
13324714-C-T | 11169038-C-T | *** | |||||||
13324710-G-C | 11169034-G-C | *** | |||||||
13324709-T-C | 11169033-T-C | *** | |||||||
13315127-C-T | 11159451-C-T | *** | |||||||
9211247-AAC-A | 9373638-AAC-A | 18×AC | *** | ||||||
9962083-A-T | 10124474-A-T | *** | |||||||
13310692-C-T | 11155016-C-T | *** | |||||||
13488176-A-G | 11332500-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 671978 | 10757532 | 7991092 | 8104874 |
Kit: 671978 | 10140402 | 8212895 | 8047048 |
Used in age calculations | 10757532 | 8212895 | 8104874 |
Counts of SNPs | 8 | 8 |
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