Gordon
FTDNA: 8300, BigY2: 8300Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 8300 | BigY2 8300 |
---|---|---|---|---|---|---|---|---|---|
18353116-G-GTA | 16241236-G-GTA | P6_Prx | 8×TA | *** | A* | ||||
19857518-A-C | 17745638-A-C | P5_Prx | *** | A* | |||||
23173790-G-C | 21011904-G-C | Y | *** | A* | |||||
28816662-C-A | 26670515-C-A | A* | |||||||
28817717-G-A | 26671570-G-A | A* | |||||||
18150375-A-G | 16038495-A-G | BY55046 | Y | Y | + | + | |||
9877560-G-C | 10039951-G-C | BY81705 | Y | Y | + | + | |||
13599762-A-G | 11444086-A-G | BY54248 | + | + | |||||
15758049-A-C | 13646169-A-C | BY103900 | Y | Y | + | + | |||
16374643-AAGG-A | 14262763-AAGG-A | + | + | ||||||
16857239-G-T | 14745359-G-T | BY110623 | Y | Y | + | + | |||
18403538-C-T | 16291658-C-T | BY121742 | P6_Gap | + | + | ||||
18773958-C-T | 16662078-C-T | BY123789 | Y | Y | + | + | |||
18966516-A-G | 16854636-A-G | BY125161 | Y | Y | + | + | |||
20065853-A-T | 17953973-A-T | FT452545 | P5_Gap | + | + | ||||
21710453-A-T | 19548567-A-T | BY134875 | Y | Y | + | + | |||
21843450-CA-C | 19681564-CA-C | + | + | ||||||
22751934-A-T | 20590048-A-T | BY140548 | Y | Y | + | + | |||
23353517-C-G | 21191631-C-G | BY144780 | Y | Y | + | + | |||
23353929-A-G | 21192043-A-G | BY144789 | Y | Y | + | + | |||
12957-G-C | + | ||||||||
18775-G-T | + | ||||||||
22233755-C-A | 20071869-C-A | DYZ19 | *** | * | |||||
22300251-T-A | 20138365-T-A | DYZ19 | *** | * | |||||
8702809-TG-T | 8834768-TG-T | ** | |||||||
7591215-T-A | 7723174-T-A | YP1098 ZS1764 | ** | ||||||
9654304-A-G | 9816695-A-G | BY31700 | IR3_Prx | ** | |||||
24595389-T-A | 22449242-T-A | P3_t2 | ** | ||||||
15158636-T-A | 13046722-T-A | ** | |||||||
17569226-G-A | 15457346-G-A | 25×A | ** | ||||||
21946429-T-A | 19784543-T-A | ** | |||||||
5393343-C-A | 5525302-C-A | ** | |||||||
13697981-T-G | 11542305-T-G | ** | |||||||
5923866-G-T | 6055825-G-T | FT325516 | ** | ||||||
16322193-C-T | 14210313-C-T | Y41 | ** | ||||||
19075524-C-A | 16963644-C-A | ZS1035 | ** | ||||||
22217030-C-G | 20055144-C-G | Y26297 | DYZ19 | ** | |||||
23311200-T-C | 21149314-T-C | M9385 | ** | ||||||
59007450-TG-T | 56861303-TG-T | ** | |||||||
7243145-C-A | 7375104-C-A | ** | |||||||
23435181-G-T | 21273295-G-T | 20×T | ** | ||||||
28798284-G-A | 26652137-G-A | ** | |||||||
22502545-A-G | 20340659-A-G | DYZ19 | ** | ||||||
10804667-G-T | ** | ||||||||
9088821-G-A | 9251212-G-A | Y29868 | ** | ||||||
7123654-C-A | 7255613-C-A | ** | |||||||
6825578-G-T | 6957537-G-T | ** | |||||||
10031281-C-A | 10193672-C-A | ** | |||||||
14359903-C-A | 12239198-C-A | ** | |||||||
24530901-A-AC | 22384754-A-AC | P3_t2 | ** | ||||||
28815229-T-A | 26669082-T-A | ** | |||||||
5815593-TC-T | 5947552-TC-T | ** | |||||||
16316802-C-A | 14204922-C-A | ** | |||||||
22023226-C-G | 19861340-C-G | ** | |||||||
10790190-C-A | ** | ||||||||
10900861-C-T | ** | ||||||||
9351210-C-A | 9513601-C-A | ** | |||||||
8216438-T-C | 8348397-T-C | ** | |||||||
23831304-A-G | 21669418-A-G | ** | |||||||
10986819-T-C | BY84083 | ** | |||||||
10780518-C-T | ** | ||||||||
10780534-A-T | ** | ||||||||
10780537-CCATTATTTTA-C | ** | ||||||||
7768762-C-A | 7900721-C-A | ** | |||||||
10885257-TTTCCA-T | ** | ||||||||
17312026-G-GA | 15200146-G-GA | 9×A | ** | ||||||
24636431-A-T | 22490284-A-T | P3_t2 | ** | ||||||
28617740-A-G | 26471593-A-G | ** | |||||||
10877943-A-C | ** | ||||||||
24296348-CAAA-C | 22150201-CAAA-C | P3_t1 | 17×A | ** | |||||
3405601-C-A | 3537560-C-A | ** | |||||||
19183855-G-T | 17071975-G-T | ** | |||||||
10668743-C-A | ** | ||||||||
3165030-C-T | 3296989-C-T | ** | |||||||
9973554-C-A | 10135945-C-A | FT63731 | ** | ||||||
14515698-CA-C | 12403899-CA-C | 9×A | ** | ||||||
16429652-G-T | 14317772-G-T | ** | |||||||
10903836-A-T | ** | ||||||||
21813757-C-A | 19651871-C-A | FT84047 | ** | ||||||
3275804-C-A | 3407763-C-A | ** | |||||||
10931048-C-A | ** | ||||||||
8399359-C-A | 8531318-C-A | ** | |||||||
6056576-G-T | 6188535-G-T | ** | |||||||
14639064-C-CTT | 12527133-C-CTT | 18×T | ** | ||||||
22164541-C-T | 20002655-C-T | ** | |||||||
20872238-T-TC | 18710352-T-TC | P4_Dst | ** | ||||||
17152935-C-A | 15041055-C-A | ** | |||||||
28617745-G-C | 26471598-G-C | ** | |||||||
20297867-C-CT | 18135981-C-CT | P5_Dst | 9×T | ** | |||||
15882487-A-G | 13770607-A-G | ** | |||||||
14159542-A-T | 12038836-A-T | Y90480 | ** | ||||||
10931028-G-A | ** | ||||||||
10685790-T-G | ** | ||||||||
15041056-A-T | 12929146-A-T | ** | |||||||
3385573-C-A | 3517532-C-A | ** | |||||||
11027288-C-T | ** | ||||||||
11027297-A-C | ** | ||||||||
9940544-C-A | 10102935-C-A | ** | |||||||
10664773-CCCATTCCATT-C | ** | ||||||||
21677357-C-A | 19515471-C-A | ** | |||||||
7534507-A-T | 7666466-A-T | ** | |||||||
3923249-C-A | 4055208-C-A | ** | |||||||
10955267-A-G | ** | ||||||||
10955275-C-CGACAGCCCTT | ** | ||||||||
10955288-C-A | ** | ||||||||
10988744-C-A | ** | ||||||||
14312279-C-A | 12191573-C-A | ** | |||||||
21133530-T-A | 18971644-T-A | ** | |||||||
26057913-A-AT | 23911766-A-AT | P1_Y1 | ** | ||||||
10773271-C-A | ** | ||||||||
13885877-G-TT | 11765171-G-TT | ** | |||||||
20500944-A-AC | 18339058-A-AC | P5_Dst | ** | ||||||
17278273-C-A | 15166393-C-A | 16×GAAA | ** | ||||||
6992573-G-A | 7124532-G-A | ** | |||||||
10677106-G-T | ** | ||||||||
19053436-C-A | 16941556-C-A | ** | |||||||
7371910-C-A | 7503869-C-A | ** | |||||||
10937831-A-T | ** | ||||||||
16479866-T-C | 14367986-T-C | ** | |||||||
25841771-G-A | 23695624-G-A | P1_b3 | ** | ||||||
23397036-C-A | 21235150-C-A | ** | |||||||
10868498-T-A | ** | ||||||||
10956473-T-C | ** | ||||||||
14071398-G-T | 11950692-G-T | ** | |||||||
3550572-C-T | 3682531-C-T | ** | |||||||
18731471-C-A | 16619591-C-A | ** | |||||||
6709018-C-A | 6840977-C-A | ** | |||||||
13217461-A-G | 11061785-A-G | ** | |||||||
2783731-AAAC-A | 2915690-AAAC-A | ** | |||||||
11032550-G-T | ** | ||||||||
21238139-C-A | 19076253-C-A | ** | |||||||
3407348-C-A | 3539307-C-A | ** | |||||||
9732894-T-A | 9895285-T-A | IR3_Prx | ** | ||||||
10970969-C-A | ** | ||||||||
16520989-T-A | 14409109-T-A | ** | |||||||
14071401-A-C | 11950695-A-C | ** | |||||||
21639035-G-T | 19477149-G-T | ** | |||||||
7152754-C-A | 7284713-C-A | ** | |||||||
13244938-G-T | 11089262-G-T | ** | |||||||
22008352-C-A | 19846466-C-A | ** | |||||||
23252481-G-T | 21090595-G-T | ** | |||||||
23206865-C-A | 21044979-C-A | ** | |||||||
7363862-C-A | 7495821-C-A | ** | |||||||
16217950-C-A | 14106070-C-A | ** | |||||||
5409654-C-A | 5541613-C-A | ** | |||||||
13486658-C-A | 11330982-C-A | ** | |||||||
8216436-G-C | 8348395-G-C | ** | |||||||
21709243-A-G | 19547357-A-G | ** | |||||||
28544405-C-A | 26398258-C-A | ** | |||||||
7011592-C-A | 7143551-C-A | ** | |||||||
9591035-A-AC | 9753426-A-AC | IR3_Prx | ** | ||||||
21948941-C-A | 19787055-C-A | ** | |||||||
27521945-C-A | 25375798-C-A | P1_Y2 | ** | ||||||
13217484-A-G | 11061808-A-G | ** | |||||||
23262462-C-A | 21100576-C-A | ** | |||||||
17498896-C-A | 15387016-C-A | ** | |||||||
21924027-C-A | 19762141-C-A | ** | |||||||
3079360-A-C | 3211319-A-C | ** | |||||||
10070105-C-A | 10232496-C-A | ** | |||||||
11028046-A-T | ** | ||||||||
9088823-C-T | 9251214-C-T | ** | |||||||
6402478-C-A | 6534437-C-A | ** | |||||||
9589947-T-TA | 9752338-T-TA | IR3_Prx | ** | ||||||
9551442-T-TG | 9713833-T-TG | IR3_Prx | ** | ||||||
20569376-G-T | 18407490-G-T | P5_Dst | ** | ||||||
10818747-TTTCCA-T | ** | ||||||||
10930997-A-G | ** | ||||||||
10931015-C-T | ** | ||||||||
10931037-A-AC | ** | ||||||||
10931040-CA-C | ** | ||||||||
28462927-C-A | 26316780-C-A | ** | |||||||
10762894-G-T | ** | ||||||||
14184571-C-T | 12063865-C-T | ** | |||||||
4770529-G-T | 4902488-G-T | ** | |||||||
8848089-C-A | 8980048-C-A | ** | |||||||
10658089-C-A | ** | ||||||||
14226693-C-A | 12105987-C-A | ** | |||||||
10938436-G-T | ** | ||||||||
11654788-C-A | ** | ||||||||
8093430-G-C | 8225389-G-C | ** | |||||||
8093431-A-C | 8225390-A-C | ** | |||||||
15251930-T-C | 13140016-T-C | ** | |||||||
19268199-C-T | 17156319-C-T | FT83965 | ** | ||||||
18959206-C-T | 16847326-C-T | ** | |||||||
10803559-A-T | ** | ||||||||
28633595-C-A | 26487448-C-A | ** | |||||||
19125686-C-A | 17013806-C-A | ** | |||||||
6478670-C-A | 6610629-C-A | ** | |||||||
5358971-C-A | 5490930-C-A | ** | |||||||
14380259-A-T | 12259555-A-T | ** | |||||||
16640161-C-A | 14528281-C-A | ** | |||||||
17871924-G-T | 15760044-G-T | ** | |||||||
8216423-G-TTTT | 8348382-G-TTTT | ** | |||||||
16790937-C-A | 14679057-C-A | ** | |||||||
23007045-C-A | 20845159-C-A | ** | |||||||
7418403-C-A | 7550362-C-A | ** | |||||||
20815416-TA-T | 18653530-TA-T | P4_Gap | ** | ||||||
10995677-C-A | ** | ||||||||
15871707-C-T | 13759827-C-T | FT190586 | ** | ||||||
15871730-A-G | 13759850-A-G | ** | |||||||
2693431-C-A | 2825390-C-A | ** | |||||||
19258921-C-A | 17147041-C-A | ** | |||||||
15498189-C-A | 13386309-C-A | ** | |||||||
28544987-C-A | 26398840-C-A | ** | |||||||
22914636-C-A | 20752750-C-A | ** | |||||||
23609472-T-C | 21447586-T-C | ** | |||||||
10851310-C-A | ** | ||||||||
13472233-CG-C | 11316557-CG-C | ** | |||||||
14807289-T-C | 12695360-T-C | ** | |||||||
16278448-C-A | 14166568-C-A | ** | |||||||
20640402-C-A | 18478516-C-A | P4_Prx | ** | ||||||
28635467-C-A | 26489320-C-A | ** | |||||||
19036803-C-A | 16924923-C-A | ** | |||||||
11032269-C-A | ** | ||||||||
23391527-C-T | 21229641-C-T | ** | |||||||
13328778-C-A | 11173102-C-A | ** | |||||||
25356611-C-A | 23210464-C-A | P2_r2 | ** | ||||||
14550110-C-A | 12438311-C-A | ** | |||||||
27862508-C-A | 25716361-C-A | P1_Y2 | ** | ||||||
13217451-T-G | 11061775-T-G | ** | |||||||
2693344-C-A | 2825303-C-A | ** | |||||||
3436300-C-T | 3568259-C-T | ** | |||||||
16340145-G-A | 14228265-G-A | ** | |||||||
18354148-GAA-G | 16242268-GAA-G | P6_Prx | ** | ||||||
7209158-C-A | 7341117-C-A | ** | |||||||
27417815-C-T | 25271668-C-T | P1_g3 | ** | ||||||
13502391-C-A | 11346715-C-A | ** | |||||||
7608408-C-A | 7740367-C-A | ** | |||||||
18660208-C-A | 16548328-C-A | ** | |||||||
16620150-C-A | 14508270-C-A | ** | |||||||
56848836-G-T | ** | ||||||||
15928453-C-T | 13816573-C-T | ** | |||||||
11013068-A-C | ** | ||||||||
18059952-C-A | 15948072-C-A | ** | |||||||
22798047-G-T | 20636161-G-T | ** | |||||||
10938554-C-A | ** | ||||||||
5125780-G-T | 5257739-G-T | ** | |||||||
8677984-C-A | 8809943-C-A | ** | |||||||
14697171-C-A | 12585237-C-A | ** | |||||||
13486654-G-A | 11330978-G-A | ** | |||||||
23391533-C-T | 21229647-C-T | ** | |||||||
3627504-C-A | 3759463-C-A | ** | |||||||
2750839-CAAAAAA-C | 2882798-CAAAAAA-C | 16×A | ** | ||||||
17382506-C-A | 15270626-C-A | ** | |||||||
10844795-A-T | ** | ||||||||
5926824-G-T | 6058783-G-T | ** | |||||||
17327328-C-A | 15215448-C-A | ** | |||||||
15982100-C-A | 13870220-C-A | ** | |||||||
16786214-T-C | 14674334-T-C | ** | |||||||
15302792-T-A | 13190891-T-A | ** | |||||||
10780367-C-A | ** | ||||||||
3851744-C-A | 3983703-C-A | ** | |||||||
17372085-C-A | 15260205-C-A | ** | |||||||
7111927-C-A | 7243886-C-A | ** | |||||||
18569635-C-A | 16457755-C-A | ** | |||||||
8156590-C-A | 8288549-C-A | ** | |||||||
15982115-G-A | 13870235-G-A | ** | |||||||
28632247-C-A | 26486100-C-A | ** | |||||||
10685810-T-A | ** | ||||||||
4416915-C-A | 4548874-C-A | ** | |||||||
28798530-C-A | 26652383-C-A | ** | |||||||
10810936-C-A | ** | ||||||||
17372111-G-A | 15260231-G-A | FT377989 | ** | ||||||
22044210-C-A | 19882324-C-A | ** | |||||||
10998942-C-A | ** | ||||||||
7385309-C-A | 7517268-C-A | ** | |||||||
14168655-C-A | 12047949-C-A | ** | |||||||
3110250-G-T | 3242209-G-T | ** | |||||||
18925507-T-C | 16813627-T-C | ** | |||||||
21318474-T-C | 19156588-T-C | ** | |||||||
10778123-C-A | ** | ||||||||
16519191-C-A | 14407311-C-A | ** | |||||||
10798486-C-A | ** | ||||||||
24359667-G-T | 22213520-G-T | ** | |||||||
16305904-G-C | 14194024-G-C | ** | |||||||
15616777-T-C | 13504897-T-C | ** | |||||||
21750617-G-T | ** | ||||||||
23341957-A-G | 21180071-A-G | ** | |||||||
27714344-G-C | 25568197-G-C | P1_Y2 | ** | ||||||
18462715-C-A | 16350835-C-A | P6_Dst | ** | ||||||
17788919-C-A | 15677039-C-A | ** | |||||||
16635919-C-A | 14524039-C-A | ** | |||||||
13486674-T-C | 11330998-T-C | ** | |||||||
13486742-T-C | 11331066-T-C | ** | |||||||
10972593-C-A | ** | ||||||||
18531099-A-G | 16419219-A-G | P6_Dst | ** | ||||||
4687901-C-A | 4819860-C-A | ** | |||||||
17210939-C-A | 15099059-C-A | ** | |||||||
16790981-C-A | 14679101-C-A | ** | |||||||
18531046-C-A | 16419166-C-A | P6_Dst | ** | ||||||
15585021-C-A | 13473141-C-A | ** | |||||||
18128091-C-A | 16016211-C-A | ** | |||||||
15251912-A-G | 13139998-A-G | ** | |||||||
15251931-G-A | 13140017-G-A | ** | |||||||
10929331-C-A | ** | ||||||||
11013073-C-A | ** | ||||||||
5824282-C-A | 5956241-C-A | ** | |||||||
4302606-C-A | 4434565-C-A | ** | |||||||
15982111-C-A | 13870231-C-A | ** | |||||||
11008496-C-A | ** | ||||||||
14184555-C-T | 12063849-C-T | ** | |||||||
14184561-G-C | 12063855-G-C | ** | |||||||
14184565-C-T | 12063859-C-T | ** | |||||||
18365476-C-A | 16253596-C-A | P6_Prx | ** | ||||||
15143772-C-A | 13031859-C-A | ** | |||||||
8216435-C-T | 8348394-C-T | ** | |||||||
15689107-C-A | 13577227-C-A | ** | |||||||
14555167-C-A | 12443368-C-A | ** | |||||||
23837607-G-T | 21675721-G-T | ** | |||||||
18427692-C-A | 16315812-C-A | P6_Dst | ** | ||||||
17479058-C-A | 15367178-C-A | ** | |||||||
9772169-C-A | 9934560-C-A | ** | |||||||
19183892-A-G | 17072012-A-G | ** | |||||||
14071393-G-T | 11950687-G-T | FT367658 | ** | ||||||
13217474-CAG-C | 11061798-CAG-C | ** | |||||||
13804136-G-A | 11683430-G-A | ** | |||||||
20579297-A-C | 18417411-A-C | P5_Dst | ** | ||||||
2684099-G-C | 2816058-G-C | ** | |||||||
2719070-G-T | 2851029-G-T | ** | |||||||
2793245-C-A | 2925204-C-A | ** | |||||||
2813803-C-A | 2945762-C-A | ** | |||||||
2898090-C-A | 3030049-C-A | ** | |||||||
2898202-A-C | 3030161-A-C | ** | |||||||
2948502-T-G | 3080461-T-G | ** | |||||||
3058805-G-A | 3190764-G-A | ** | |||||||
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11645620-G-A | ** | ||||||||
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21709248-C-T | 19547362-C-T | ** | |||||||
21714765-A-ACAC | 19552879-A-ACAC | ** | |||||||
21828416-C-A | 19666530-C-A | ** | |||||||
21856754-A-G | 19694868-A-G | ** | |||||||
21856821-A-C | 19694935-A-C | ** | |||||||
21874896-A-C | 19713010-A-C | ** | |||||||
21985162-AT-A | 19823276-AT-A | ** | |||||||
21987382-T-C | 19825496-T-C | ** | |||||||
22010349-T-G | 19848463-T-G | ** | |||||||
22021644-G-T | 19859758-G-T | FT84067 | ** | ||||||
22028725-C-A | 19866839-C-A | ** | |||||||
22124292-G-T | 19962406-G-T | ** | |||||||
22124326-G-T | 19962440-G-T | ** | |||||||
22132303-C-A | 19970417-C-A | ** | |||||||
22143114-C-A | 19981228-C-A | ** | |||||||
22366240-A-C | 20204354-A-C | DYZ19 | ** | ||||||
22535955-T-G | 20374069-T-G | ** | |||||||
22703641-A-C | 20541755-A-C | ** | |||||||
22722469-T-G | 20560583-T-G | ** | |||||||
22727374-G-T | 20565488-G-T | ** | |||||||
22783139-A-G | 20621253-A-G | ** | |||||||
22827379-T-A | 20665493-T-A | ** | |||||||
22827384-T-A | 20665498-T-A | ** | |||||||
23199745-G-T | 21037859-G-T | ** | |||||||
23199746-A-G | 21037860-A-G | 11×C | ** | ||||||
23276440-G-T | 21114554-G-T | ** | |||||||
23368728-T-C | 21206842-T-C | ** | |||||||
23412264-A-G | 21250378-A-G | ** | |||||||
23509064-A-T | 21347178-A-T | ** | |||||||
23529017-G-T | 21367131-G-T | ** | |||||||
23803225-CAGAATTTTTTCTTAGTTTTAAAAAT-C | 21641339-CAGAATTTTTTCTTAGTTTTAAAAAT-C | ** | |||||||
23825021-A-T | 21663135-A-T | ** | |||||||
24291383-A-T | 22145236-A-T | P3_t1 | ** | ||||||
24291427-A-C | 22145280-A-C | P3_t1 | ** | ||||||
24291437-C-T | 22145290-C-T | P3_t1 | ** | ||||||
24359642-C-T | 22213495-C-T | ** | |||||||
24359649-C-A | 22213502-C-A | ** | |||||||
24359651-G-A | 22213504-G-A | ** | |||||||
24359659-A-T | 22213512-A-T | ** | |||||||
24359664-G-C | 22213517-G-C | ** | |||||||
24376243-C-A | 22230096-C-A | ** | |||||||
24406941-G-T | 22260794-G-T | ** | |||||||
24406943-G-C | 22260796-G-C | ** | |||||||
24429978-G-A | 22283831-G-A | ** | |||||||
24517966-A-C | 22371819-A-C | ** | |||||||
24877503-CTTTTTTTT-C | 22731356-CTTTTTTTT-C | g1 | 23×T | ** | |||||
25296828-T-C | 23150681-T-C | P2_r1 | ** | ||||||
26133192-G-A | 23987045-G-A | P1_Y1 | ** | ||||||
26345837-C-A | 24199690-C-A | P1_Y1 | ** | ||||||
26413992-G-T | 24267845-G-T | P1_Y1 | ** | ||||||
26716008-C-A | 24569861-C-A | P1_g2 | ** | ||||||
27127902-A-G | 24981755-A-G | P1_g3 | ** | ||||||
27808478-G-A | 25662331-G-A | P1_Y2 | ** | ||||||
28467009-G-T | 26320862-G-T | ** | |||||||
28467066-T-C | 26320919-T-C | ** | |||||||
28531509-G-A | 26385362-G-A | ** | |||||||
28570365-G-T | 26424218-G-T | 8×A | ** | ||||||
28591262-C-G | 26445115-C-G | ** | |||||||
28620841-A-G | 26474694-A-G | ** | |||||||
28699886-C-A | 26553739-C-A | ** | |||||||
28763733-A-G | 26617586-A-G | ** | |||||||
28766203-C-T | 26620056-C-T | ** | |||||||
28772946-A-G | 26626799-A-G | ** | |||||||
28798324-G-T | 26652177-G-T | ** | |||||||
28802777-T-A | 26656630-T-A | ** | |||||||
28805844-A-G | 26659697-A-G | ** | |||||||
28808627-A-T | 26662480-A-T | ** | |||||||
28815172-T-G | 26669025-T-G | ** | |||||||
28815217-T-G | 26669070-T-G | ** | |||||||
56830245-T-A | ** | ||||||||
56876854-G-T | ** | ||||||||
13488507-C-T | 11332831-C-T | *** | |||||||
21468775-C-T | 19306889-C-T | *** | |||||||
9978275-C-T | 10140666-C-T | *** | |||||||
9978280-C-T | 10140671-C-T | *** | |||||||
9240688-A-G | 9403079-A-G | *** | |||||||
28800140-T-A | 26653993-T-A | *** | |||||||
18209106-GTAGA-G,GTAGG | 16097226-GTAGA-G,GTAGG | 12×TAGA | *** | ||||||
28800207-G-GATGGGAAAGC | 26654060-G-GATGGGAAAGC | *** | |||||||
24138632-C-G | 21992485-C-G | P3_b1 | *** | ||||||
16281839-C-A | 14169959-C-A | *** | |||||||
19006136-C-A | 16894256-C-A | A3443 | 21×A | *** | |||||
22231400-G-A | 20069514-G-A | DYZ19 | *** | ||||||
22247855-T-A | 20085969-T-A | DYZ19 | *** | ||||||
22285259-G-C | 20123373-G-C | DYZ19 | *** | ||||||
22311689-T-G | 20149803-T-G | DYZ19 | *** | ||||||
25206059-C-T | 23059912-C-T | g1 | *** | ||||||
25824717-C-A | 23678570-C-A | P1_b3 | *** | ||||||
17189351-C-A | 15077471-C-A | *** | |||||||
15969934-T-G | 13858054-T-G | *** | |||||||
10673896-T-C | *** | ||||||||
16970425-C-A | 14858545-C-A | *** | |||||||
56850970-ACT-A,ACG | *** | ||||||||
19536917-C-A | 17425037-C-A | *** | |||||||
22792681-C-A | 20630795-C-A | *** | |||||||
22902098-G-A | 20740212-G-A | *** | |||||||
14479486-C-A | 12358755-C-A | *** | |||||||
23742046-C-A | 21580160-C-A | *** | |||||||
7608518-T-A | 7740477-T-A | *** | |||||||
14356909-A-T | 12236204-A-T | *** | |||||||
15399501-C-A | 13287621-C-A | *** | |||||||
23792029-C-T | 21630143-C-T | 15×T | *** | ||||||
7986751-G-T | 8118710-G-T | *** | |||||||
15352166-T-A | 13240285-T-A | *** | |||||||
16612800-A-G | 14500920-A-G | *** | |||||||
8730834-C-A | 8862793-C-A | *** | |||||||
10892554-A-AC | *** | ||||||||
2861526-C-A | 2993485-C-A | *** | |||||||
13453355-A-G | 11297679-A-G | *** | |||||||
56830535-CATTCTGCTGA-C,CATTCT | *** | ||||||||
17478430-C-A | 15366550-C-A | *** | |||||||
8473803-CTT-C | 8605762-CTT-C | 12×T | *** | ||||||
10974192-C-A | *** | ||||||||
21891153-C-A | 19729267-C-A | *** | |||||||
11649227-C-A | *** | ||||||||
10802353-A-T | *** | ||||||||
11676798-C-A | *** | ||||||||
27053715-G-T | 24907568-G-T | P1_r4 | *** | ||||||
2752404-C-A | 2884363-C-A | *** | |||||||
8235483-G-T | 8367442-G-T | *** | |||||||
16275755-C-A | 14163875-C-A | *** | |||||||
17729928-C-A | 15618048-C-A | *** | |||||||
24503093-C-A | 22356946-C-A | *** | |||||||
22588051-C-A | 20426165-C-A | *** | |||||||
21438482-C-A | 19276596-C-A | *** | |||||||
15633013-C-A | 13521133-C-A | *** | |||||||
21651815-C-A | 19489929-C-A | *** | |||||||
24502942-C-A | 22356795-C-A | *** | |||||||
15761301-A-T | 13649421-A-T | *** | |||||||
15699948-C-A | 13588068-C-A | *** | |||||||
6825666-G-T | 6957625-G-T | *** | |||||||
8078643-G-T | 8210602-G-T | *** | |||||||
16519283-C-A | 14407403-C-A | *** | |||||||
2791251-G-C | 2923210-G-C | *** | |||||||
3279758-G-A | 3411717-G-A | *** | |||||||
3345933-C-A | 3477892-C-A | *** | |||||||
3626078-C-A | 3758037-C-A | *** | |||||||
6144737-G-A | 6276696-G-A | IR3_Dst | 12×A | *** | |||||
6347502-A-T | 6479461-A-T | *** | |||||||
6734893-C-A | 6866852-C-A | *** | |||||||
6741449-T-A | 6873408-T-A | *** | |||||||
7134908-G-A | 7266867-G-A | *** | |||||||
7396527-C-A | 7528486-C-A | *** | |||||||
7645600-T-A | 7777559-T-A | *** | |||||||
7768872-G-A | 7900831-G-A | *** | |||||||
7868799-C-A | 8000758-C-A | *** | |||||||
10664649-C-A | *** | ||||||||
10667029-C-CGGTTA | *** | ||||||||
10764566-A-G,T | *** | ||||||||
10786505-G-T | *** | ||||||||
10906779-T-C | *** | ||||||||
11669606-A-G | *** | ||||||||
14440145-A-G | 12319418-A-G | *** | |||||||
14464518-G-T | 12343791-G-T | *** | |||||||
14843990-T-C | 12732056-T-C | *** | |||||||
14940073-CAAAA-C,CAA | 12828147-CAAAA-C,CAA | 15×A | *** | ||||||
15171226-CTTT-C,CTTTT | 13059312-CTTT-C,CTTTT | 19×T | *** | ||||||
15338519-C-A | 13226637-C-A | *** | |||||||
15677933-CAAAAA-C,CA | 13566053-CAAAAA-C,CA | 21×A | *** | ||||||
15747464-C-A | 13635584-C-A | *** | |||||||
16019439-G-T | 13907559-G-T | *** | |||||||
16134314-A-G | 14022434-A-G | *** | |||||||
16719835-C-A | 14607955-C-A | *** | |||||||
17585608-C-A | 15473728-C-A | *** | |||||||
17781563-A-T | 15669683-A-T | *** | |||||||
18084084-C-A | 15972204-C-A | *** | |||||||
18827901-T-G | 16716021-T-G | *** | |||||||
18934014-C-A | 16822134-C-A | *** | |||||||
19113582-C-T | 17001702-C-T | *** | |||||||
19187381-C-A | 17075501-C-A | *** | |||||||
19546300-A-G | 17434420-A-G | *** | |||||||
19564566-C-A | 17452686-C-A | *** | |||||||
20829799-C-A | 18667913-C-A | P4_Gap | *** | ||||||
21515152-G-A | 19353266-G-A | *** | |||||||
21648227-C-A | 19486341-C-A | *** | |||||||
21653865-C-A | 19491979-C-A | *** | |||||||
21989032-C-A | 19827146-C-A | *** | |||||||
22200355-CAAAA-C,CA | 20038469-CAAAA-C,CA | 13×A | *** | ||||||
22601706-G-A | 20439820-G-A | *** | |||||||
22919325-GTTT-G,GTT | 20757439-GTTT-G,GTT | 20×T | *** | ||||||
23381837-C-A | 21219951-C-A | *** | |||||||
23854916-GA-G | 21693030-GA-G | *** | |||||||
24409361-TG-T | 22263214-TG-T | *** | |||||||
28635397-C-A | 26489250-C-A | *** | |||||||
28768580-A-G | 26622433-A-G | *** | |||||||
28804045-A-G | 26657898-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.