Donahue
FTDNA: B99579, BigY2: B99579MDKA Birth:
IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA B99579 | BigY2 B99579 |
|---|---|---|---|---|---|---|---|---|
| hg38:Y:10683616-A-C | A+ | |||||||
| hg38:Y:10683654-C-A | A+ | |||||||
| hg38:Y:10683655-C-A | A+ | |||||||
| hg38:Y:10683657-C-T | A+ | |||||||
| hg38:Y:10683665-C-T | A+ | |||||||
| hg38:Y:10683680-C-A | A+ | |||||||
| hg19:Y:19811360-C-T hg38:Y:17699480-C-T | P5_Prx | *** | A* | |||||
| hg19:Y:22304641-G-A hg38:Y:20142755-G-A | DYZ19 | *** | A* | |||||
| hg19:Y:8568465-G-T hg38:Y:8700424-G-T | BY48367 | Y | Y | 22×T | + | + | ||
| hg19:Y:22473642-G-C hg38:Y:20311756-G-C | BY21255 | DYZ19 | + | |||||
| hg19:Y:22475824-G-A hg38:Y:20313938-G-A | BY223436 | DYZ19 | *** | + | ||||
| hg19:Y:18028728-C-T hg38:Y:15916848-C-T | BY23441 | BY24103 | Y | + | + | |||
| hg19:Y:2690084-T-C hg38:Y:2822043-T-C | BY55812 | Y | Y | + | + | |||
| hg19:Y:7526502-G-T hg38:Y:7658461-G-T | BY65649 | Y | Y | + | + | |||
| hg19:Y:9437903-G-A hg38:Y:9600294-G-A | BY79395 | Y | Y | + | + | |||
| hg19:Y:13668751-G-A hg38:Y:11513075-G-A | FGC56983 | DYZ17 | + | + | ||||
| hg19:Y:13816825-A-C hg38:Y:11696119-A-C | BY90430 | DYZ17 | + | + | ||||
| hg19:Y:15764702-A-G hg38:Y:13652822-A-G | BY103915 | Y | Y | + | + | |||
| hg19:Y:15765599-T-C hg38:Y:13653719-T-C | BY103932 | Y | Y | + | + | |||
| hg19:Y:18236103-T-C hg38:Y:16124223-T-C | BY121077 | Y | + | + | ||||
| hg19:Y:19115029-A-G hg38:Y:17003149-A-G | BY126395 | Y | Y | + | + | |||
| hg19:Y:19298916-A-C hg38:Y:17187036-A-C | BY128058 | Y | ** | + | ||||
| hg19:Y:19445984-T-A hg38:Y:17334104-T-A | BY129106 | Y | Y | + | + | |||
| hg19:Y:22010092-G-T hg38:Y:19848206-G-T | BY137074 | Y | Y | + | + | |||
| hg19:Y:22086307-A-G hg38:Y:19924421-A-G | Y108351 | Y | Y | + | + | |||
| hg19:Y:22472342-T-G hg38:Y:20310456-T-G | A2047 | DYZ19 | + | ** | ||||
| hg19:Y:24519465-C-T hg38:Y:22373318-C-T | A5972 | + | + | |||||
| hg19:Y:22237727-T-A hg38:Y:20075841-T-A | DYZ19 | *** | * | |||||
| hg19:Y:8491157-A-AC hg38:Y:8623116-A-AC | 9×C | *** | * | |||||
| hg19:Y:15558491-TAGATAGAT-T,TAGACAGAC hg38:Y:13446611-TAGATAGAT-T,TAGACAGAC | * | |||||||
| hg19:Y:13719258-A-T hg38:Y:11563582-A-T | DYZ17 | * | ||||||
| hg19:Y:13719258-AG-A hg38:Y:11563582-AG-A | DYZ17 | * | ||||||
| hg19:Y:13223639-AGAGG-A hg38:Y:11067963-AGAGG-A | ** | |||||||
| hg19:Y:22473503-C-T hg38:Y:20311617-C-T | FGC1728 | DYZ19 | ** | |||||
| hg19:Y:18687704-CAAA-C hg38:Y:16575824-CAAA-C | 14×A | ** | ||||||
| hg19:Y:25173622-G-A hg38:Y:23027475-G-A | BY184332 | g1 | ** | |||||
| hg19:Y:22472328-C-A hg38:Y:20310442-C-A | BY202408 | A2045 | DYZ19 | ** | ** | |||
| hg19:Y:6768884-G-T hg38:Y:6900843-G-T | ** | |||||||
| hg19:Y:27792016-A-T hg38:Y:25645869-A-T | P1_Y2 | ** | ||||||
| hg19:Y:20326069-G-T hg38:Y:18164183-G-T | P5_Dst | ** | ||||||
| hg19:Y:20340166-A-G hg38:Y:18178280-A-G | P5_Dst | ** | ||||||
| hg19:Y:27585939-G-T hg38:Y:25439792-G-T | P1_Y2 | ** | ||||||
| hg19:Y:6786909-A-T hg38:Y:6918868-A-T | ** | |||||||
| hg19:Y:6768879-C-G hg38:Y:6900838-C-G | ** | |||||||
| hg19:Y:22486304-T-G hg38:Y:20324418-T-G | DYZ19 | ** | ||||||
| hg19:Y:26376486-C-A hg38:Y:24230339-C-A | P1_Y1 | ** | ||||||
| hg19:Y:22472332-A-G hg38:Y:20310446-A-G | BY202408 | A2046 | DYZ19 | ** | ** | |||
| hg19:Y:22475774-A-C hg38:Y:20313888-A-C | DYZ19 | ** | ||||||
| hg19:Y:14589365-C-T hg38:Y:12477565-C-T | ** | |||||||
| hg38:Y:11022033-C-T | ** | |||||||
| hg19:Y:2773691-T-TAA hg38:Y:2905650-T-TAA | 19×A | ** | ||||||
| hg38:Y2:13464-T-C | ** | |||||||
| hg19:Y:14538713-C-A hg38:Y:12426914-C-A | ** | |||||||
| hg19:Y:21464513-C-A hg38:Y:19302627-C-A | ** | |||||||
| hg19:Y:19183847-G-A hg38:Y:17071967-G-A | ** | |||||||
| hg19:Y:4302830-G-T hg38:Y:4434789-G-T | FT402872 | ** | ||||||
| hg38:Y:10841089-C-T | ** | |||||||
| hg19:Y:15940305-TCA-T hg38:Y:13828425-TCA-T | ** | |||||||
| hg38:Y2:13465-G-A | ** | |||||||
| hg38:Y:10808960-T-C | ** | |||||||
| hg38:Y:10808976-C-G | ** | |||||||
| hg38:Y:10808986-T-TCCGCA | ** | |||||||
| hg38:Y:10808993-C-A | ** | |||||||
| hg19:Y:13926903-T-C hg38:Y:11806197-T-C | ** | |||||||
| hg19:Y:5022028-T-C hg38:Y:5153987-T-C | ** | |||||||
| hg38:Y:10971240-C-A | ** | |||||||
| hg38:Y:10989141-C-T | ** | |||||||
| hg38:Y:56830267-C-T | ** | |||||||
| hg38:Y:56830278-C-T | ** | |||||||
| hg19:Y:10008116-C-A hg38:Y:10170507-C-A | ** | |||||||
| hg19:Y:7256114-A-G hg38:Y:7388073-A-G | ** | |||||||
| hg19:Y:19732412-C-CG hg38:Y:17620532-C-CG | P5_Prx | ** | ||||||
| hg19:Y:14424019-G-T hg38:Y:12303294-G-T | ** | |||||||
| hg19:Y:9956357-C-A hg38:Y:10118748-C-A | ** | |||||||
| hg19:Y:15964642-CTTT-C hg38:Y:13852762-CTTT-C | 14×T | ** | ||||||
| hg38:Y:10828177-C-CGGATG | ** | |||||||
| hg38:Y:10954378-C-A | ** | |||||||
| hg38:Y:10850552-GTCCATTCCAT-G | ** | |||||||
| hg19:Y:5022023-AG-A hg38:Y:5153982-AG-A | ** | |||||||
| hg38:Y:10841084-C-T | ** | |||||||
| hg38:Y:10841088-A-T | ** | |||||||
| hg38:Y:10841101-C-A | ** | |||||||
| hg19:Y:17122279-G-A hg38:Y:15010399-G-A | ** | |||||||
| hg19:Y:3535949-A-G hg38:Y:3667908-A-G | ** | |||||||
| hg38:Y:10939602-C-T | ** | |||||||
| hg38:Y:10796110-T-A | ** | |||||||
| hg38:Y:10796128-G-C | ** | |||||||
| hg38:Y:10796133-G-A | ** | |||||||
| hg38:Y:10796134-T-C | ** | |||||||
| hg38:Y:10796140-T-A | ** | |||||||
| hg38:Y:10760465-A-T | ** | |||||||
| hg38:Y:10760470-T-A | ** | |||||||
| hg38:Y:10760471-A-T | ** | |||||||
| hg38:Y:10760482-G-C | ** | |||||||
| hg38:Y:10760484-A-C | ** | |||||||
| hg38:Y:10760487-C-A | ** | |||||||
| hg38:Y:10760488-T-G | ** | |||||||
| hg19:Y:21408322-C-A hg38:Y:19246436-C-A | ** | |||||||
| hg19:Y:21979946-T-A hg38:Y:19818060-T-A | ** | |||||||
| hg19:Y:27417741-T-A hg38:Y:25271594-T-A | P1_g3 | ** | ||||||
| hg19:Y:16172228-G-T hg38:Y:14060348-G-T | ** | |||||||
| hg38:Y:10988855-TATTCC-T | ** | |||||||
| hg19:Y:23204510-C-A hg38:Y:21042624-C-A | ** | |||||||
| hg19:Y:8389597-G-A hg38:Y:8521556-G-A | ** | |||||||
| hg19:Y:18645961-C-A hg38:Y:16534081-C-A | ** | |||||||
| hg38:Y:10797906-A-T | ** | |||||||
| hg38:Y:10760459-A-G | ** | |||||||
| hg38:Y:10760340-C-CACTCT | ** | |||||||
| hg38:Y:10669544-C-G | ** | |||||||
| hg19:Y:19745021-A-T hg38:Y:17633141-A-T | P5_Prx | ** | ||||||
| hg19:Y:15936718-C-A hg38:Y:13824838-C-A | ** | |||||||
| hg19:Y:7237275-G-GA hg38:Y:7369234-G-GA | 9×A | ** | ||||||
| hg19:Y:8690237-TGA-T hg38:Y:8822196-TGA-T | ** | |||||||
| hg19:Y:8216423-G-TT hg38:Y:8348382-G-TT | ** | |||||||
| hg38:Y:11034940-C-G | ** | |||||||
| hg19:Y:13461087-C-G hg38:Y:11305411-C-G | ** | |||||||
| hg19:Y:8167885-C-A hg38:Y:8299844-C-A | ** | |||||||
| hg19:Y:28687863-G-T hg38:Y:26541716-G-T | ** | |||||||
| hg19:Y:18972852-G-T hg38:Y:16860972-G-T | ** | |||||||
| hg19:Y:15370262-G-T hg38:Y:13258382-G-T | ** | |||||||
| hg19:Y:27647569-C-A hg38:Y:25501422-C-A | P1_Y2 | ** | ||||||
| hg38:Y:10828163-A-T | ** | |||||||
| hg38:Y:10828176-C-A | ** | |||||||
| hg38:Y:10797892-T-C | ** | |||||||
| hg19:Y:27546766-C-G hg38:Y:25400619-C-G | P1_Y2 | ** | ||||||
| hg19:Y:6901107-C-A hg38:Y:7033066-C-A | ** | |||||||
| hg19:Y:13445179-C-A hg38:Y:11289503-C-A | ** | |||||||
| hg38:Y:11022024-T-G | ** | |||||||
| hg19:Y:14743147-T-A hg38:Y:12631215-T-A | ** | |||||||
| hg38:Y:10797976-A-C | ** | |||||||
| hg38:Y:10926550-C-G | ** | |||||||
| hg38:Y:10926560-T-G | ** | |||||||
| hg38:Y:10943300-C-A | ** | |||||||
| hg38:Y:10796927-C-T | ** | |||||||
| hg19:Y:21212243-C-A hg38:Y:19050357-C-A | ** | |||||||
| hg19:Y:5577233-C-A hg38:Y:5709192-C-A | ** | |||||||
| hg38:Y:56830287-C-CCTTTA | ** | |||||||
| hg38:Y:56830293-C-A | ** | |||||||
| hg38:Y:10970656-TCACTC-T | ** | |||||||
| hg19:Y:7256112-T-G hg38:Y:7388071-T-G | ** | |||||||
| hg19:Y:28759544-C-A hg38:Y:26613397-C-A | ** | |||||||
| hg19:Y:6352004-A-G hg38:Y:6483963-A-G | ** | |||||||
| hg19:Y:15698535-C-A hg38:Y:13586655-C-A | ** | |||||||
| hg38:Y:56830309-A-G | ** | |||||||
| hg19:Y:15700379-C-A hg38:Y:13588499-C-A | ** | |||||||
| hg19:Y:17804437-C-A hg38:Y:15692557-C-A | ** | |||||||
| hg19:Y:15642834-C-A hg38:Y:13530954-C-A | ** | |||||||
| hg19:Y:9996031-C-A hg38:Y:10158422-C-A | ** | |||||||
| hg19:Y:16427332-C-A hg38:Y:14315452-C-A | ** | |||||||
| hg38:Y:10776840-C-A | ** | |||||||
| hg38:Y:10885391-T-C | ** | |||||||
| hg38:Y:10885396-C-T | ** | |||||||
| hg38:Y:10885423-T-C | ** | |||||||
| hg38:Y:10885428-C-G | ** | |||||||
| hg19:Y:13872777-C-A hg38:Y:11752071-C-A | ** | |||||||
| hg19:Y:5606696-A-C hg38:Y:5738655-A-C | ** | |||||||
| hg19:Y:14352924-C-A hg38:Y:12232219-C-A | ** | |||||||
| hg19:Y:26170415-T-A hg38:Y:24024268-T-A | P1_Y1 | ** | ||||||
| hg19:Y:14076142-G-A hg38:Y:11955436-G-A | ** | |||||||
| hg38:Y:10883751-C-T | ** | |||||||
| hg19:Y:28772936-C-A hg38:Y:26626789-C-A | ** | |||||||
| hg38:Y:10929258-G-T | ** | |||||||
| hg19:Y:28632728-C-T hg38:Y:26486581-C-T | ** | |||||||
| hg38:Y:11011462-ACATTC-A | ** | |||||||
| hg38:Y:10889786-A-C | ** | |||||||
| hg19:Y:3990662-C-A hg38:Y:4122621-C-A | ** | |||||||
| hg19:Y:9426729-C-A hg38:Y:9589120-C-A | ** | |||||||
| hg19:Y:23848632-G-T hg38:Y:21686746-G-T | ** | |||||||
| hg19:Y:19252944-G-T hg38:Y:17141064-G-T | ** | |||||||
| hg19:Y:3626433-T-A hg38:Y:3758392-T-A | ** | |||||||
| hg19:Y:9075897-C-A hg38:Y:9238288-C-A | ** | |||||||
| hg19:Y:13898821-G-T hg38:Y:11778115-G-T | ** | |||||||
| hg19:Y:13898785-G-T hg38:Y:11778079-G-T | ** | |||||||
| hg38:Y:11022023-C-T | ** | |||||||
| hg19:Y:9830883-C-A hg38:Y:9993274-C-A | ** | |||||||
| hg38:Y:10797970-C-T | ** | |||||||
| hg19:Y:15402957-C-A hg38:Y:13291077-C-A | ** | |||||||
| hg19:Y:21858256-T-A hg38:Y:19696370-T-A | ** | |||||||
| hg38:Y:11664440-C-A | DYZ17 | ** | ||||||
| hg19:Y:7020259-C-A hg38:Y:7152218-C-A | ** | |||||||
| hg19:Y:4679297-A-G hg38:Y:4811256-A-G | ** | |||||||
| hg19:Y:18050625-C-A hg38:Y:15938745-C-A | ** | |||||||
| hg38:Y:10685743-A-G | FT91561 | ** | ||||||
| hg19:Y:19252922-G-T hg38:Y:17141042-G-T | ** | |||||||
| hg38:Y:10985193-C-A | ** | |||||||
| hg38:Y:10797992-C-A | ** | |||||||
| hg38:Y:10889775-C-T | ** | |||||||
| hg38:Y:10889802-T-G | ** | |||||||
| hg19:Y:19202848-C-A hg38:Y:17090968-C-A | ** | |||||||
| hg38:Y:10865775-T-C | ** | |||||||
| hg19:Y:6280425-G-A hg38:Y:6412384-G-A | IR3_Dst | 9×A | ** | |||||
| hg19:Y:27570915-G-T hg38:Y:25424768-G-T | P1_Y2 | ** | ||||||
| hg38:Y:10846661-C-A | ** | |||||||
| hg19:Y:5022039-T-A hg38:Y:5153998-T-A | ** | |||||||
| hg38:Y:11657352-CGAATG-C | DYZ17 | ** | ||||||
| hg19:Y:22615204-C-A hg38:Y:20453318-C-A | ** | |||||||
| hg19:Y:23205345-A-G hg38:Y:21043459-A-G | ** | |||||||
| hg19:Y:19677906-C-G hg38:Y:17566026-C-G | P5_Prx | ** | ||||||
| hg19:Y:15109819-C-A hg38:Y:12997906-C-A | ** | |||||||
| hg19:Y:6280433-A-G hg38:Y:6412392-A-G | IR3_Dst | ** | ||||||
| hg19:Y:27570919-C-T hg38:Y:25424772-C-T | P1_Y2 | ** | ||||||
| hg38:Y:10828171-C-A | ** | |||||||
| hg19:Y:14495724-C-A hg38:Y:12383921-C-A | ** | |||||||
| hg19:Y:5412029-C-A hg38:Y:5543988-C-A | ** | |||||||
| hg38:Y:21754424-G-T | ** | |||||||
| hg19:Y:19375510-A-C hg38:Y:17263630-A-C | ** | |||||||
| hg19:Y:3853678-A-T hg38:Y:3985637-A-T | ** | |||||||
| hg19:Y:27398407-T-A hg38:Y:25252260-T-A | P1_g3 | ** | ||||||
| hg19:Y:19391114-TTTG-T hg38:Y:17279234-TTTG-T | ** | |||||||
| hg19:Y:2758832-G-A hg38:Y:2890791-G-A | ** | |||||||
| hg19:Y:27917661-G-A hg38:Y:25771514-G-A | P1_Y2 | ** | ||||||
| hg19:Y:19047873-C-A hg38:Y:16935993-C-A | FT347918 | ** | ||||||
| hg19:Y:15686939-C-A hg38:Y:13575059-C-A | ** | |||||||
| hg19:Y:16437969-C-A hg38:Y:14326089-C-A | ** | |||||||
| hg19:Y:7105160-C-A hg38:Y:7237119-C-A | ** | |||||||
| hg19:Y:16904585-C-A hg38:Y:14792705-C-A | ** | |||||||
| hg19:Y:23439143-C-A hg38:Y:21277257-C-A | ** | |||||||
| hg38:Y:10797952-T-G | ** | |||||||
| hg38:Y:10797960-C-CTCTCT | ** | |||||||
| hg38:Y:10798010-C-T | ** | |||||||
| hg19:Y:19793879-T-TC hg38:Y:17681999-T-TC | P5_Prx | ** | ||||||
| hg38:Y:10669547-T-A | ** | |||||||
| hg19:Y:15198730-T-A hg38:Y:13086816-T-A | ** | |||||||
| hg38:Y:10760340-C-A | ** | |||||||
| hg19:Y:14068461-C-T hg38:Y:11947755-C-T | ** | |||||||
| hg19:Y:23277076-AT-A hg38:Y:21115190-AT-A | 9×T | ** | ||||||
| hg19:Y:14352940-C-A hg38:Y:12232235-C-A | ** | |||||||
| hg19:Y:16309536-C-A hg38:Y:14197656-C-A | ** | |||||||
| hg19:Y:21875802-T-C hg38:Y:19713916-T-C | ** | |||||||
| hg19:Y:13229522-C-A hg38:Y:11073846-C-A | FT230008 | ** | ||||||
| hg19:Y:16309550-C-A hg38:Y:14197670-C-A | ** | |||||||
| hg19:Y:8274111-C-A hg38:Y:8406070-C-A | ** | |||||||
| hg19:Y:19546103-C-A hg38:Y:17434223-C-A | ** | |||||||
| hg19:Y:2649700-G-A hg38:Y:2781659-G-A | ** | |||||||
| hg19:Y:2682313-C-A hg38:Y:2814272-C-A | ** | |||||||
| hg19:Y:2682370-T-A hg38:Y:2814329-T-A | ** | |||||||
| hg19:Y:2752627-G-A hg38:Y:2884586-G-A | ** | |||||||
| hg19:Y:3003193-C-A hg38:Y:3135152-C-A | ** | |||||||
| hg19:Y:3016297-G-A hg38:Y:3148256-G-A | ** | |||||||
| hg19:Y:3032977-G-C hg38:Y:3164936-G-C | ** | |||||||
| hg19:Y:3051383-T-C hg38:Y:3183342-T-C | ** | |||||||
| hg19:Y:3218427-G-C hg38:Y:3350386-G-C | ** | |||||||
| hg19:Y:3252565-C-G hg38:Y:3384524-C-G | ** | |||||||
| hg19:Y:3252876-C-A hg38:Y:3384835-C-A | ** | |||||||
| hg19:Y:3368182-A-G hg38:Y:3500141-A-G | ** | |||||||
| hg19:Y:3389860-T-A hg38:Y:3521819-T-A | ** | |||||||
| hg19:Y:3853679-T-C hg38:Y:3985638-T-C | ** | |||||||
| hg19:Y:3906562-T-A hg38:Y:4038521-T-A | ** | |||||||
| hg19:Y:4053600-G-T hg38:Y:4185559-G-T | ** | |||||||
| hg19:Y:4101077-T-C hg38:Y:4233036-T-C | ** | |||||||
| hg19:Y:4229993-C-A hg38:Y:4361952-C-A | ** | |||||||
| hg19:Y:4270861-C-G hg38:Y:4402820-C-G | ** | |||||||
| hg19:Y:4509136-A-T hg38:Y:4641095-A-T | ** | |||||||
| hg19:Y:4587550-T-C hg38:Y:4719509-T-C | ** | |||||||
| hg19:Y:4601507-T-C hg38:Y:4733466-T-C | ** | |||||||
| hg19:Y:4703027-G-A hg38:Y:4834986-G-A | ** | |||||||
| hg19:Y:4703135-T-G hg38:Y:4835094-T-G | ** | |||||||
| hg19:Y:4755766-A-G hg38:Y:4887725-A-G | ** | |||||||
| hg19:Y:4787273-C-A hg38:Y:4919232-C-A | ** | |||||||
| hg19:Y:4804518-A-T hg38:Y:4936477-A-T | ** | |||||||
| hg19:Y:4863315-C-A hg38:Y:4995274-C-A | ** | |||||||
| hg19:Y:4959434-A-G hg38:Y:5091393-A-G | ** | |||||||
| hg19:Y:5094893-G-T hg38:Y:5226852-G-T | ** | |||||||
| hg19:Y:5189174-A-G hg38:Y:5321133-A-G | ** | |||||||
| hg19:Y:5202107-C-T hg38:Y:5334066-C-T | ** | |||||||
| hg19:Y:5242316-T-C hg38:Y:5374275-T-C | FT80566 | ** | ||||||
| hg19:Y:5248726-C-T hg38:Y:5380685-C-T | ** | |||||||
| hg19:Y:5428324-A-G hg38:Y:5560283-A-G | ** | |||||||
| hg19:Y:5468015-G-C hg38:Y:5599974-G-C | ** | |||||||
| hg19:Y:5502977-T-C hg38:Y:5634936-T-C | ** | |||||||
| hg19:Y:5808418-A-C hg38:Y:5940377-A-C | ** | |||||||
| hg19:Y:5808433-T-A hg38:Y:5940392-T-A | ** | |||||||
| hg19:Y:5905811-A-G hg38:Y:6037770-A-G | ** | |||||||
| hg19:Y:5969836-A-C hg38:Y:6101795-A-C | ** | |||||||
| hg19:Y:6029042-G-A hg38:Y:6161001-G-A | ** | |||||||
| hg19:Y:6086043-G-C hg38:Y:6218002-G-C | ** | |||||||
| hg19:Y:6090842-T-A hg38:Y:6222801-T-A | ** | |||||||
| hg19:Y:6245774-T-C hg38:Y:6377733-T-C | IR3_Dst | ** | ||||||
| hg19:Y:6280443-A-C hg38:Y:6412402-A-C | IR3_Dst | ** | ||||||
| hg19:Y:6365115-C-A hg38:Y:6497074-C-A | ** | |||||||
| hg19:Y:6473204-C-A hg38:Y:6605163-C-A | ** | |||||||
| hg19:Y:6473321-A-T hg38:Y:6605280-A-T | ** | |||||||
| hg19:Y:6651778-TA-T hg38:Y:6783737-TA-T | ** | |||||||
| hg19:Y:6732406-TGTTACGCAG-T hg38:Y:6864365-TGTTACGCAG-T | ** | |||||||
| hg19:Y:6786904-C-T hg38:Y:6918863-C-T | ** | |||||||
| hg19:Y:6888585-C-A hg38:Y:7020544-C-A | ** | |||||||
| hg19:Y:6901080-C-T hg38:Y:7033039-C-T | ** | |||||||
| hg19:Y:6929633-T-C hg38:Y:7061592-T-C | ** | |||||||
| hg19:Y:7101169-C-G hg38:Y:7233128-C-G | ** | |||||||
| hg19:Y:7183608-T-C hg38:Y:7315567-T-C | ** | |||||||
| hg19:Y:7222190-T-A hg38:Y:7354149-T-A | ** | |||||||
| hg19:Y:7228304-T-C hg38:Y:7360263-T-C | ** | |||||||
| hg19:Y:7360445-G-C hg38:Y:7492404-G-C | ** | |||||||
| hg19:Y:7375068-C-G hg38:Y:7507027-C-G | FT174084 | ** | ||||||
| hg19:Y:7443998-A-G hg38:Y:7575957-A-G | ** | |||||||
| hg19:Y:7469551-C-A hg38:Y:7601510-C-A | IR1_L | ** | ||||||
| hg19:Y:7650440-C-T hg38:Y:7782399-C-T | ** | |||||||
| hg19:Y:7896974-G-T hg38:Y:8028933-G-T | ** | |||||||
| hg19:Y:8076717-A-G hg38:Y:8208676-A-G | ** | |||||||
| hg19:Y:8167711-T-C hg38:Y:8299670-T-C | ** | |||||||
| hg19:Y:8987689-A-C hg38:Y:9150080-A-C | ** | |||||||
| hg38:Y:10617970-T-A | FT427778 | ** | ||||||
| hg38:Y:10647732-C-A | ** | |||||||
| hg38:Y:10661086-C-T | ** | |||||||
| hg38:Y:10673015-T-C | ** | |||||||
| hg38:Y:10694116-A-C | ** | |||||||
| hg38:Y:10784845-G-T | ** | |||||||
| hg38:Y:10786489-T-A | ** | |||||||
| hg38:Y:10792617-C-T | FT431404 | ** | ||||||
| hg38:Y:10797951-A-T | ** | |||||||
| hg38:Y:10827851-G-T | ** | |||||||
| hg38:Y:10858993-T-C | ** | |||||||
| hg38:Y:10868070-A-T | ** | |||||||
| hg38:Y:10889787-T-TTTGAG | ** | |||||||
| hg38:Y:10916286-T-A | ** | |||||||
| hg38:Y:10933640-C-T | ** | |||||||
| hg38:Y:10959552-T-A | ** | |||||||
| hg38:Y:10959571-C-T | ** | |||||||
| hg38:Y:10967317-A-T | ** | |||||||
| hg38:Y:10974850-T-C | ** | |||||||
| hg38:Y:10985202-TCCA-T | ** | |||||||
| hg38:Y:10985236-C-CCAT | ** | |||||||
| hg38:Y:10987235-T-A | ** | |||||||
| hg38:Y:10993997-C-A | ** | |||||||
| hg38:Y:11002181-A-C | ** | |||||||
| hg38:Y:11002187-C-T | ** | |||||||
| hg38:Y:11038131-A-ATTTCG | ** | |||||||
| hg19:Y:13229892-G-T hg38:Y:11074216-G-T | ** | |||||||
| hg19:Y:13248585-C-T hg38:Y:11092909-C-T | ** | |||||||
| hg19:Y:13313054-T-G hg38:Y:11157378-T-G | ** | |||||||
| hg19:Y:13349496-C-A hg38:Y:11193820-C-A | ** | |||||||
| hg19:Y:13474831-G-T hg38:Y:11319155-G-T | ** | |||||||
| hg19:Y:13482873-T-C hg38:Y:11327197-T-C | ** | |||||||
| hg19:Y:13487745-CCCA-C hg38:Y:11332069-CCCA-C | ** | |||||||
| hg19:Y:13543172-T-G hg38:Y:11387496-T-G | ** | |||||||
| hg19:Y:13614272-T-A hg38:Y:11458596-T-A | ** | |||||||
| hg19:Y:13641037-T-G hg38:Y:11485361-T-G | ** | |||||||
| hg19:Y:13705486-G-C hg38:Y:11549810-G-C | DYZ17 | ** | ||||||
| hg19:Y:13705496-G-GGGTTTCAT hg38:Y:11549820-G-GGGTTTCAT | DYZ17 | ** | ||||||
| hg38:Y:11644469-A-G | DYZ17 | ** | ||||||
| hg38:Y:11653392-G-A | DYZ17 | ** | ||||||
| hg38:Y:11672005-A-C | DYZ17 | ** | ||||||
| hg19:Y:13824670-C-A hg38:Y:11703964-C-A | DYZ17 | ** | ||||||
| hg19:Y:13828351-A-T hg38:Y:11707645-A-T | DYZ17 | ** | ||||||
| hg19:Y:13898827-C-T hg38:Y:11778121-C-T | ** | |||||||
| hg19:Y:13945819-G-T hg38:Y:11825113-G-T | ** | |||||||
| hg19:Y:13963424-G-A hg38:Y:11842718-G-A | ** | |||||||
| hg19:Y:14220881-A-T hg38:Y:12100175-A-T | ** | |||||||
| hg19:Y:14224421-C-A hg38:Y:12103715-C-A | ** | |||||||
| hg19:Y:14313665-A-T hg38:Y:12192959-A-T | ** | |||||||
| hg19:Y:14474487-T-A hg38:Y:12353756-T-A | ** | |||||||
| hg19:Y:14495723-T-G hg38:Y:12383920-T-G | ** | |||||||
| hg19:Y:14584517-G-C hg38:Y:12472717-G-C | ** | |||||||
| hg19:Y:14683727-G-T hg38:Y:12571793-G-T | ** | |||||||
| hg19:Y:14784781-C-T hg38:Y:12672851-C-T | ** | |||||||
| hg19:Y:14994395-A-G hg38:Y:12882480-A-G | ** | |||||||
| hg19:Y:15114724-AT-A hg38:Y:13002811-AT-A | ** | |||||||
| hg19:Y:15117622-C-A hg38:Y:13005709-C-A | ** | |||||||
| hg19:Y:15127180-G-T hg38:Y:13015267-G-T | ** | |||||||
| hg19:Y:15172706-C-A hg38:Y:13060792-C-A | ** | |||||||
| hg19:Y:15215962-A-C hg38:Y:13104048-A-C | ** | |||||||
| hg19:Y:15280176-A-T hg38:Y:13168275-A-T | ** | |||||||
| hg19:Y:15431615-A-G hg38:Y:13319735-A-G | ** | |||||||
| hg19:Y:15490729-C-A hg38:Y:13378849-C-A | ** | |||||||
| hg19:Y:15500663-T-G hg38:Y:13388783-T-G | ** | |||||||
| hg19:Y:15565968-A-T hg38:Y:13454088-A-T | ** | |||||||
| hg19:Y:15688397-T-C hg38:Y:13576517-T-C | ** | |||||||
| hg19:Y:16047902-A-C hg38:Y:13936022-A-C | ** | |||||||
| hg19:Y:16279039-C-T hg38:Y:14167159-C-T | ** | |||||||
| hg19:Y:16413622-G-A hg38:Y:14301742-G-A | FT175846 | ** | ||||||
| hg19:Y:16666988-A-C hg38:Y:14555108-A-C | ** | |||||||
| hg19:Y:16676569-T-C hg38:Y:14564689-T-C | ** | |||||||
| hg19:Y:16701807-G-T hg38:Y:14589927-G-T | FGC35119 | ** | ||||||
| hg19:Y:16876797-C-G hg38:Y:14764917-C-G | ** | |||||||
| hg19:Y:16905866-ATCTC-A hg38:Y:14793986-ATCTC-A | ** | |||||||
| hg19:Y:17029151-T-C hg38:Y:14917271-T-C | ** | |||||||
| hg19:Y:17093867-A-G hg38:Y:14981987-A-G | ** | |||||||
| hg19:Y:17157549-A-T hg38:Y:15045669-A-T | ** | |||||||
| hg19:Y:17165502-G-A hg38:Y:15053622-G-A | ** | |||||||
| hg19:Y:17170307-A-G hg38:Y:15058427-A-G | ** | |||||||
| hg19:Y:17307383-C-G hg38:Y:15195503-C-G | ** | |||||||
| hg19:Y:17385417-A-T hg38:Y:15273537-A-T | ** | |||||||
| hg19:Y:17605624-C-A hg38:Y:15493744-C-A | ** | |||||||
| hg19:Y:17673161-A-G hg38:Y:15561281-A-G | ** | |||||||
| hg19:Y:17741305-A-T hg38:Y:15629425-A-T | ** | |||||||
| hg19:Y:17863461-G-T hg38:Y:15751581-G-T | ** | |||||||
| hg19:Y:17882879-C-A hg38:Y:15770999-C-A | ** | |||||||
| hg19:Y:17998676-G-A hg38:Y:15886796-G-A | P7_Gap | ** | ||||||
| hg19:Y:18093255-C-A hg38:Y:15981375-C-A | ** | |||||||
| hg19:Y:18127938-T-A hg38:Y:16016058-T-A | ** | |||||||
| hg19:Y:18128045-T-A hg38:Y:16016165-T-A | ** | |||||||
| hg19:Y:18185135-A-G hg38:Y:16073255-A-G | ** | |||||||
| hg19:Y:18564897-A-G hg38:Y:16453017-A-G | ** | |||||||
| hg19:Y:18593504-A-G hg38:Y:16481624-A-G | ** | |||||||
| hg19:Y:18726711-T-A hg38:Y:16614831-T-A | ** | |||||||
| hg19:Y:18737497-T-A hg38:Y:16625617-T-A | ** | |||||||
| hg19:Y:18837536-T-A hg38:Y:16725656-T-A | ** | |||||||
| hg19:Y:19252928-A-T hg38:Y:17141048-A-T | ** | |||||||
| hg19:Y:19252934-G-C hg38:Y:17141054-G-C | ** | |||||||
| hg19:Y:19267285-A-C hg38:Y:17155405-A-C | ** | |||||||
| hg19:Y:19337661-A-T hg38:Y:17225781-A-T | ** | |||||||
| hg19:Y:19361264-T-A hg38:Y:17249384-T-A | ** | |||||||
| hg19:Y:19375490-G-C hg38:Y:17263610-G-C | ** | |||||||
| hg19:Y:19377435-GAAGGAAGA-G hg38:Y:17265555-GAAGGAAGA-G | ** | |||||||
| hg19:Y:19411690-A-T hg38:Y:17299810-A-T | ** | |||||||
| hg19:Y:19415350-G-A hg38:Y:17303470-G-A | ** | |||||||
| hg19:Y:19522740-C-A hg38:Y:17410860-C-A | ** | |||||||
| hg19:Y:19657987-T-TA hg38:Y:17546107-T-TA | P5_Prx | ** | ||||||
| hg19:Y:19677913-C-GT hg38:Y:17566033-C-GT | P5_Prx | ** | ||||||
| hg19:Y:19721244-G-T hg38:Y:17609364-G-T | P5_Prx | ** | ||||||
| hg19:Y:19721410-A-C hg38:Y:17609530-A-C | P5_Prx | ** | ||||||
| hg19:Y:19732322-G-T hg38:Y:17620442-G-T | P5_Prx | ** | ||||||
| hg19:Y:19849216-G-T hg38:Y:17737336-G-T | P5_Prx | ** | ||||||
| hg19:Y:20128362-G-T hg38:Y:18016482-G-T | P5_Dst | ** | ||||||
| hg19:Y:20712200-T-C hg38:Y:18550314-T-C | P4_Prx | ** | ||||||
| hg19:Y:20723342-T-C hg38:Y:18561456-T-C | P4_Prx | ** | ||||||
| hg19:Y:21012137-C-A hg38:Y:18850251-C-A | P4_Dst | ** | ||||||
| hg19:Y:21148422-C-A hg38:Y:18986536-C-A | ** | |||||||
| hg19:Y:21211281-T-C hg38:Y:19049395-T-C | 13×A | ** | ||||||
| hg19:Y:21317014-C-A hg38:Y:19155128-C-A | ** | |||||||
| hg19:Y:21323520-T-A hg38:Y:19161634-T-A | ** | |||||||
| hg19:Y:21379977-C-A hg38:Y:19218091-C-A | ** | |||||||
| hg19:Y:21775129-A-T hg38:Y:19613243-A-T | ** | |||||||
| hg19:Y:21819923-T-G hg38:Y:19658037-T-G | ** | |||||||
| hg19:Y:22060350-C-A hg38:Y:19898464-C-A | ** | |||||||
| hg19:Y:22122227-C-G hg38:Y:19960341-C-G | ** | |||||||
| hg19:Y:22260540-A-C hg38:Y:20098654-A-C | DYZ19 | ** | ||||||
| hg19:Y:22273538-A-AT hg38:Y:20111652-A-AT | DYZ19 | ** | ||||||
| hg19:Y:22447589-T-G hg38:Y:20285703-T-G | DYZ19 | ** | ||||||
| hg19:Y:22535960-A-G hg38:Y:20374074-A-G | ** | |||||||
| hg19:Y:22855375-A-C hg38:Y:20693489-A-C | ** | |||||||
| hg19:Y:22884256-T-C hg38:Y:20722370-T-C | ** | |||||||
| hg19:Y:22963655-G-A hg38:Y:20801769-G-A | ** | |||||||
| hg19:Y:23293654-A-G hg38:Y:21131768-A-G | FT182685 | ** | ||||||
| hg19:Y:23460558-C-G hg38:Y:21298672-C-G | ** | |||||||
| hg19:Y:23491008-C-G hg38:Y:21329122-C-G | ** | |||||||
| hg19:Y:23531724-C-T hg38:Y:21369838-C-T | ** | |||||||
| hg19:Y:23952920-T-C hg38:Y:21806773-T-C | ** | |||||||
| hg19:Y:24403465-G-T hg38:Y:22257318-G-T | ** | |||||||
| hg19:Y:24449926-G-C hg38:Y:22303779-G-C | ** | |||||||
| hg19:Y:25972278-A-G hg38:Y:23826131-A-G | P1_Y1 | ** | ||||||
| hg19:Y:25982580-A-AT hg38:Y:23836433-A-AT | P1_Y1 | ** | ||||||
| hg19:Y:26067514-T-TAA hg38:Y:23921367-T-TAA | P1_Y1 | ** | ||||||
| hg19:Y:26320718-G-T hg38:Y:24174571-G-T | P1_Y1 | ** | ||||||
| hg19:Y:27127899-G-C hg38:Y:24981752-G-C | P1_g3 | ** | ||||||
| hg19:Y:27398405-T-A hg38:Y:25252258-T-A | P1_g3 | ** | ||||||
| hg19:Y:27417745-C-T hg38:Y:25271598-C-T | P1_g3 | ** | ||||||
| hg19:Y:27546776-C-G hg38:Y:25400629-C-G | P1_Y2 | ** | ||||||
| hg19:Y:27647583-C-A hg38:Y:25501436-C-A | P1_Y2 | ** | ||||||
| hg19:Y:27791980-G-GCAT hg38:Y:25645833-G-GCAT | P1_Y2 | 9×CTT | ** | |||||
| hg19:Y:27792057-T-A hg38:Y:25645910-T-A | P1_Y2 | ** | ||||||
| hg19:Y:28062445-A-T hg38:Y:25916298-A-T | P1_Y2 | ** | ||||||
| hg19:Y:28062607-A-T hg38:Y:25916460-A-T | P1_Y2 | ** | ||||||
| hg19:Y:28243494-A-G hg38:Y:26097347-A-G | P1_b4 | ** | ||||||
| hg19:Y:28532735-A-G hg38:Y:26386588-A-G | FT158413 | ** | ||||||
| hg19:Y:28544429-T-G hg38:Y:26398282-T-G | ** | |||||||
| hg19:Y:28629600-T-G hg38:Y:26483453-T-G | ** | |||||||
| hg19:Y:28629612-T-A hg38:Y:26483465-T-A | ** | |||||||
| hg19:Y:28711991-T-C hg38:Y:26565844-T-C | ** | |||||||
| hg19:Y:28711992-G-A hg38:Y:26565845-G-A | ** | |||||||
| hg19:Y:28711996-G-C hg38:Y:26565849-G-C | ** | |||||||
| hg19:Y:28712001-T-C hg38:Y:26565854-T-C | ** | |||||||
| hg19:Y:28760196-C-T hg38:Y:26614049-C-T | ** | |||||||
| hg38:Y:56837036-T-A | ** | |||||||
| hg19:Y:13138016-C-A hg38:Y:10627502-C-A | *** | |||||||
| hg19:Y:13858572-A-C hg38:Y:11737866-A-C | DYZ17 | *** | ||||||
| hg19:Y:58972900-C-T hg38:Y:56826753-C-T | *** | |||||||
| hg19:Y:13140547-T-A,C hg38:Y:10630033-T-A,C | *** | |||||||
| hg19:Y:19962147-C-T hg38:Y:17850267-C-T | P5_Prx | *** | ||||||
| hg19:Y:22447982-T-G hg38:Y:20286096-T-G | DYZ19 | *** | ||||||
| hg19:Y:22502410-G-C hg38:Y:20340524-G-C | DYZ19 | *** | ||||||
| hg19:Y:24929196-A-T hg38:Y:22783049-A-T | g1 | *** | ||||||
| hg19:Y:25012135-T-G hg38:Y:22865988-T-G | g1 | *** | ||||||
| hg19:Y:25324392-G-C hg38:Y:23178245-G-C | P2_r1 | *** | ||||||
| hg19:Y:22829644-CAAAA-C hg38:Y:20667758-CAAAA-C | 18×A | *** | ||||||
| hg38:Y:10807250-C-A | *** | |||||||
| hg19:Y:15969937-T-A hg38:Y:13858057-T-A | *** | |||||||
| hg38:Y2:13461-C-T | *** | |||||||
| hg19:Y:4959568-C-A hg38:Y:5091527-C-A | *** | |||||||
| hg38:Y:10965613-CCATTC-C,CCATTA | *** | |||||||
| hg19:Y:14109316-CTT-C,CT hg38:Y:11988610-CTT-C,CT | 14×T | *** | ||||||
| hg19:Y:8019413-GA-G hg38:Y:8151372-GA-G | 10×A | *** | ||||||
| hg19:Y:17004633-G-A hg38:Y:14892753-G-A | 9×A | *** | ||||||
| hg19:Y:21773937-C-A hg38:Y:19612051-C-A | *** | |||||||
| hg19:Y:2686599-C-A hg38:Y:2818558-C-A | *** | |||||||
| hg19:Y:14394456-G-A hg38:Y:12273752-G-A | *** | |||||||
| hg19:Y:9852658-C-A hg38:Y:10015049-C-A | *** | |||||||
| hg19:Y:16288185-ATTTT-A hg38:Y:14176305-ATTTT-A | 16×T | *** | ||||||
| hg19:Y:8705695-A-T hg38:Y:8837654-A-T | *** | |||||||
| hg38:Y:10746940-T-C | *** | |||||||
| hg38:Y:10997469-C-A | *** | |||||||
| hg19:Y:13446671-A-C hg38:Y:11290995-A-C | *** | |||||||
| hg38:Y:10825693-A-T | *** | |||||||
| hg19:Y:15396751-C-A hg38:Y:13284871-C-A | *** | |||||||
| hg19:Y:13454696-C-A hg38:Y:11299020-C-A | *** | |||||||
| hg19:Y:27339704-G-T hg38:Y:25193557-G-T | P1_g3 | *** | ||||||
| hg19:Y:14359923-GAAAA-G hg38:Y:12239218-GAAAA-G | 14×A | *** | ||||||
| hg19:Y:22489662-A-G hg38:Y:20327776-A-G | DYZ19 | *** | ||||||
| hg38:Y:56833250-C-A | *** | |||||||
| hg19:Y:28798763-C-A hg38:Y:26652616-C-A | *** | |||||||
| hg19:Y:18793549-G-T hg38:Y:16681669-G-T | *** | |||||||
| hg19:Y:2763793-ACC-A,CC hg38:Y:2895752-ACC-A,CC | *** | |||||||
| hg38:Y:56834246-TCCG-T,TCCATTCCG | *** | |||||||
| hg19:Y:14541221-C-A hg38:Y:12429422-C-A | *** | |||||||
| hg38:Y:10661330-C-CCCATCCCATCCCATTCCATT | *** | |||||||
| hg19:Y:15911996-C-A hg38:Y:13800116-C-A | *** | |||||||
| hg19:Y:2960023-C-A hg38:Y:3091982-C-A | *** | |||||||
| hg19:Y:18570181-C-A hg38:Y:16458301-C-A | *** | |||||||
| hg38:Y:56836764-C-A | *** | |||||||
| hg19:Y:15427304-C-A hg38:Y:13315424-C-A | *** | |||||||
| hg19:Y:17014728-C-A hg38:Y:14902848-C-A | *** | |||||||
| hg19:Y:7605339-TA-T hg38:Y:7737298-TA-T | 9×A | *** | ||||||
| hg19:Y:15718104-C-A hg38:Y:13606224-C-A | *** | |||||||
| hg19:Y:14761540-C-A hg38:Y:12649609-C-A | *** | |||||||
| hg19:Y:6697239-C-A hg38:Y:6829198-C-A | *** | |||||||
| hg19:Y:7163426-C-G hg38:Y:7295385-C-G | *** | |||||||
| hg19:Y:7866990-C-A hg38:Y:7998949-C-A | *** | |||||||
| hg19:Y:8172687-CTTTTTTTTT-C hg38:Y:8304646-CTTTTTTTTT-C | 22×T | *** | ||||||
| hg38:Y:10825337-C-T | *** | |||||||
| hg38:Y:10852008-C-T | *** | |||||||
| hg38:Y:10978116-A-T | *** | |||||||
| hg19:Y:14464165-ATTTTT-A,AT hg38:Y:12343438-ATTTTT-A,AT | 18×T | *** | ||||||
| hg19:Y:14488394-C-CA hg38:Y:12367663-C-CA | *** | |||||||
| hg19:Y:14657665-G-A hg38:Y:12545730-G-A | *** | |||||||
| hg19:Y:15382784-A-T hg38:Y:13270904-A-T | *** | |||||||
| hg19:Y:16640097-C-A hg38:Y:14528217-C-A | *** | |||||||
| hg19:Y:17046249-A-T hg38:Y:14934369-A-T | *** | |||||||
| hg19:Y:17086044-GA-G hg38:Y:14974164-GA-G | *** | |||||||
| hg19:Y:17277937-A-G hg38:Y:15166057-A-G | *** | |||||||
| hg19:Y:18089069-A-T hg38:Y:15977189-A-T | *** | |||||||
| hg19:Y:19720732-TG-G,TT hg38:Y:17608852-TG-G,TT | P5_Prx | *** | ||||||
| hg19:Y:21216923-C-A hg38:Y:19055037-C-A | *** | |||||||
| hg19:Y:21905298-AAGG-A,AGG hg38:Y:19743412-AAGG-A,AGG | *** | |||||||
| hg19:Y:22204211-C-A hg38:Y:20042325-C-A | *** | |||||||
| hg19:Y:22655247-T-A hg38:Y:20493361-T-A | *** | |||||||
| hg19:Y:22874622-A-G hg38:Y:20712736-A-G | *** | |||||||
| hg19:Y:23377559-A-G hg38:Y:21215673-A-G | *** | |||||||
| hg19:Y:24417115-A-G hg38:Y:22270968-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: B99579 | 10463870 | 7535139 | 7607034 |
| Kit: B99579 | 9382067 | 7655200 | 7564208 |
| Used in age calculations | 10463870 | 7655200 | 7607034 |
| Counts of SNPs | 12 | 11 |
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