Franklin
FTDNA: 558922, BigY2: 558922Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 558922 | BigY2 558922 |
---|---|---|---|---|---|---|---|---|---|
20957958-T-C | 18796072-T-C | P4_Dst | A+ | ||||||
21795111-G-A | 19633225-G-A | Z21211 | ** | ||||||
18565060-TCAAA-T | 16453180-TCAAA-T | ** | |||||||
21262720-C-A | 19100834-C-A | ** | |||||||
5066020-T-A | 5197979-T-A | 10×A | ** | ||||||
13866179-G-A | 11745473-G-A | ** | |||||||
58996159-T-TA | 56850012-T-TA | ** | |||||||
14482194-G-A | 12361463-G-A | P61 | ** | ** | |||||
11025740-C-A | ** | ||||||||
14328152-C-A | 12207446-C-A | ** | |||||||
10842524-C-G | ** | ||||||||
10842531-A-T | ** | ||||||||
10842544-C-A | ** | ||||||||
23465809-G-T | 21303923-G-T | ** | |||||||
10847034-A-T | ** | ||||||||
10847040-C-T | ** | ||||||||
10847054-A-T | ** | ||||||||
10847080-C-CTGCACTCCCT | ** | ||||||||
10847110-T-TTTGTC | ** | ||||||||
18045371-C-T | 15933491-C-T | 18×T | ** | ||||||
6037491-T-C | 6169450-T-C | ** | |||||||
15200256-C-A | 13088342-C-A | ** | |||||||
6780597-C-A | 6912556-C-A | ** | |||||||
10792310-T-C | ** | ||||||||
6341222-CAAA-C | 6473181-CAAA-C | IR3_Dst | 15×A | ** | |||||
11663459-C-A | ** | ||||||||
15733878-TCAA-T | 13621998-TCAA-T | ** | |||||||
16904633-G-A | 14792753-G-A | ** | |||||||
14539179-C-A | 12427380-C-A | ** | |||||||
10775423-C-A | ** | ||||||||
10997981-C-A | ** | ||||||||
16181306-T-A | 14069426-T-A | ** | |||||||
20637632-GT-G | 18475746-GT-G | P4_Prx | ** | ||||||
10999070-T-C | ** | ||||||||
6106108-A-C | 6238067-A-C | ** | |||||||
21335132-G-T | 19173246-G-T | ** | |||||||
7866543-C-A | 7998502-C-A | ** | |||||||
10751053-C-T | ** | ||||||||
18045369-C-A | 15933489-C-A | ** | |||||||
20001327-C-A | 17889447-C-A | P5_Prx | ** | ||||||
10842514-C-G | ** | ||||||||
10787952-C-T | ** | ||||||||
21617760-C-A | 19455874-C-A | ** | |||||||
27872567-GA-G | 25726420-GA-G | P1_Y2 | ** | ||||||
16673108-C-A | 14561228-C-A | ** | |||||||
26248129-T-C | 24101982-T-C | P1_Y1 | ** | ||||||
5755293-T-G | 5887252-T-G | ** | |||||||
14743650-C-A | 12631719-C-A | ** | |||||||
2738740-T-C | 2870699-T-C | ** | |||||||
10692547-C-A | ** | ||||||||
21482782-GA-G | 19320896-GA-G | ** | |||||||
23723538-C-A | 21561652-C-A | ** | |||||||
17597743-T-A | 15485863-T-A | ** | |||||||
17739898-C-A | 15628018-C-A | FT267345 | ** | ||||||
10932451-A-T | ** | ||||||||
4439494-C-A | 4571453-C-A | ** | |||||||
26970926-A-G | 24824779-A-G | P1_r4 | ** | ||||||
7058075-C-T | 7190034-C-T | ** | |||||||
10040723-C-A | 10203114-C-A | ** | |||||||
19043106-C-A | 16931226-C-A | ** | |||||||
17794292-C-A | 15682412-C-A | ** | |||||||
23810631-C-A | 21648745-C-A | ** | |||||||
10898547-G-T | ** | ||||||||
10931026-A-C | ** | ||||||||
9312827-T-G | 9475218-T-G | ** | |||||||
15532588-C-A | 13420708-C-A | ** | |||||||
21515860-CT-C | 19353974-CT-C | ** | |||||||
26970902-G-T | 24824755-G-T | P1_r4 | ** | ||||||
27971709-T-G | 25825562-T-G | P1_Y2 | ** | ||||||
19389745-G-T | 17277865-G-T | ** | |||||||
7753476-C-A | 7885435-C-A | ** | |||||||
15011529-C-A | 12899617-C-A | ** | |||||||
7353131-G-T | 7485090-G-T | ** | |||||||
18725014-G-T | 16613134-G-T | ** | |||||||
16479893-A-G | 14368013-A-G | ** | |||||||
22316243-C-T | 20154357-C-T | DYZ19 | ** | ||||||
18710162-C-A | 16598282-C-A | ** | |||||||
16038103-C-A | 13926223-C-A | ** | |||||||
10982528-C-A | ** | ||||||||
15386333-C-A | 13274453-C-A | ** | |||||||
21503321-C-A | 19341435-C-A | ** | |||||||
17707375-T-C | 15595495-T-C | ** | |||||||
9899551-C-A | 10061942-C-A | ** | |||||||
11013085-C-A | ** | ||||||||
28515296-C-A | 26369149-C-A | ** | |||||||
13542331-C-A | 11386655-C-A | ** | |||||||
27423957-G-A | 25277810-G-A | P1_g3 | ** | ||||||
14581096-G-T | 12469296-G-T | ** | |||||||
10693770-A-G | ** | ||||||||
18753402-G-T | 16641522-G-T | ** | |||||||
13231673-C-A | 11075997-C-A | ** | |||||||
10663064-C-A | ** | ||||||||
14380124-A-G | 12259420-A-G | ** | |||||||
15770627-G-T | 13658747-G-T | ** | |||||||
15202217-G-A | 13090303-G-A | ** | |||||||
20252757-T-A | 18090871-T-A | P5_Dst | ** | ||||||
23096982-A-G | 20935096-A-G | ** | |||||||
28689152-G-T | 26543005-G-T | ** | |||||||
6698878-G-T | 6830837-G-T | ** | |||||||
10776861-C-A | ** | ||||||||
10766521-C-A | ** | ||||||||
10771443-C-A | ** | ||||||||
14029504-A-G | 11908798-A-G | ** | |||||||
23355270-A-G | 21193384-A-G | ** | |||||||
7701885-C-A | 7833844-C-A | ** | |||||||
10993059-CA-C | ** | ||||||||
10993066-C-T | ** | ||||||||
16943532-C-A | 14831652-C-A | ** | |||||||
13597032-C-A | 11441356-C-A | ** | |||||||
10786126-A-G | ** | ||||||||
23885306-A-T | 21723420-A-T | ** | |||||||
7153032-C-A | 7284991-C-A | ** | |||||||
23037233-G-T | 20875347-G-T | ** | |||||||
20790991-T-C | 18629105-T-C | P4_Prx | ** | ||||||
10657652-G-C | ** | ||||||||
14074037-C-A | 11953331-C-A | ** | |||||||
19930478-T-TC | 17818598-T-TC | P5_Prx | ** | ||||||
3116425-C-A | 3248384-C-A | ** | |||||||
27492-G-T | ** | ||||||||
10998459-G-T | ** | ||||||||
10070134-G-T | 10232525-G-T | ** | |||||||
19304619-C-A | 17192739-C-A | ** | |||||||
2684277-T-C | 2816236-T-C | ** | |||||||
21972281-C-A | 19810395-C-A | ** | |||||||
7894556-A-T | 8026515-A-T | ** | |||||||
14844501-C-A | 12732567-C-A | ** | |||||||
3571630-C-A | 3703589-C-A | ** | |||||||
10808495-C-A | ** | ||||||||
10689791-A-T | ** | ||||||||
10767895-C-A | ** | ||||||||
28800844-C-A | 26654697-C-A | Y60073 | ** | ||||||
6996945-C-A | 7128904-C-A | ** | |||||||
5186442-G-T | 5318401-G-T | ** | |||||||
24575878-T-TG | 22429731-T-TG | P3_t2 | ** | ||||||
17158995-GA-T | 15047115-GA-T | ** | |||||||
21954426-C-A | 19792540-C-A | ** | |||||||
10654980-C-A | ** | ||||||||
2926482-C-T | 3058441-C-T | ** | |||||||
19792673-T-TG | 17680793-T-TG | P5_Prx | ** | ||||||
21212762-C-A | 19050876-C-A | ** | |||||||
13228198-C-A | 11072522-C-A | ** | |||||||
17527396-G-T | 15415516-G-T | ** | |||||||
24885623-C-T | 22739476-C-T | g1 | ** | ||||||
7281742-T-C | 7413701-T-C | ** | |||||||
14764334-C-A | 12652403-C-A | ** | |||||||
14384184-G-T | 12263480-G-T | ** | |||||||
6295451-T-G | 6427410-T-G | IR3_Dst | ** | ||||||
15873414-C-A | 13761534-C-A | ** | |||||||
14029064-C-A | 11908358-C-A | ** | |||||||
16246073-C-T | 14134193-C-T | ** | |||||||
10789639-C-A | ** | ||||||||
56858059-C-A | ** | ||||||||
10663143-G-T | ** | ||||||||
18578061-C-A | 16466181-C-A | ** | |||||||
22871969-T-C | 20710083-T-C | ** | |||||||
21515853-A-C | 19353967-A-C | ** | |||||||
5888327-C-A | 6020286-C-A | ** | |||||||
19369375-C-A | 17257495-C-A | ** | |||||||
10995035-C-A | ** | ||||||||
14981963-CTCTT-C | 12870031-CTCTT-C | ** | |||||||
2817707-TACAAAAA-T | 2949666-TACAAAAA-T | ** | |||||||
2825319-C-A | 2957278-C-A | ** | |||||||
2881463-A-G | 3013422-A-G | ** | |||||||
2938392-A-T | 3070351-A-T | ** | |||||||
3006377-A-C | 3138336-A-C | ** | |||||||
3029851-C-T | 3161810-C-T | ** | |||||||
3046448-G-A | 3178407-G-A | ** | |||||||
3054767-C-A | 3186726-C-A | ** | |||||||
3254772-T-A | 3386731-T-A | ** | |||||||
3254803-G-T | 3386762-G-T | ** | |||||||
3254859-T-G | 3386818-T-G | ** | |||||||
3254912-C-A | 3386871-C-A | ** | |||||||
3260862-A-G | 3392821-A-G | ** | |||||||
3260971-C-A | 3392930-C-A | ** | |||||||
3330332-T-A | 3462291-T-A | ** | |||||||
3640671-T-G | 3772630-T-G | ** | |||||||
3686537-A-G | 3818496-A-G | ** | |||||||
3826269-C-A | 3958228-C-A | ** | |||||||
3927889-GA-G | 4059848-GA-G | ** | |||||||
3937519-G-T | 4069478-G-T | ** | |||||||
3987153-G-A | 4119112-G-A | ** | |||||||
4063351-G-T | 4195310-G-T | ** | |||||||
4077579-G-T | 4209538-G-T | ** | |||||||
4113127-A-T | 4245086-A-T | ** | |||||||
4174588-T-A | 4306547-T-A | ** | |||||||
4257551-C-A | 4389510-C-A | ** | |||||||
4357478-A-G | 4489437-A-G | ** | |||||||
4372017-G-A | 4503976-G-A | ** | |||||||
4439400-T-C | 4571359-T-C | ** | |||||||
4538372-T-A | 4670331-T-A | ** | |||||||
4540282-A-G | 4672241-A-G | ** | |||||||
4671681-T-A | 4803640-T-A | ** | |||||||
4740504-T-C | 4872463-T-C | ** | |||||||
4788473-A-G | 4920432-A-G | ** | |||||||
4889884-A-G | 5021843-A-G | ** | |||||||
4902076-T-C | 5034035-T-C | ** | |||||||
5066002-C-T | 5197961-C-T | ** | |||||||
5190087-A-C | 5322046-A-C | ** | |||||||
5190178-G-C | 5322137-G-C | ** | |||||||
5226339-G-T | 5358298-G-T | ** | |||||||
5381236-T-A | 5513195-T-A | ** | |||||||
5388257-C-T | 5520216-C-T | ** | |||||||
5459859-T-G | 5591818-T-G | ** | |||||||
5471942-AAG-A | 5603901-AAG-A | ** | |||||||
5471947-AG-A | 5603906-AG-A | ** | |||||||
5471971-A-AAG | 5603930-A-AAG | ** | |||||||
5742815-T-A | 5874774-T-A | ** | |||||||
5755286-C-T | 5887245-C-T | ** | |||||||
5759328-T-G | 5891287-T-G | ** | |||||||
5798065-G-A | 5930024-G-A | ** | |||||||
5812383-T-C | 5944342-T-C | ** | |||||||
5844632-TACTTTGA-T | 5976591-TACTTTGA-T | ** | |||||||
6040195-A-G | 6172154-A-G | ** | |||||||
6040276-C-G | 6172235-C-G | ** | |||||||
6106125-A-G | 6238084-A-G | ** | |||||||
6106156-T-C | 6238115-T-C | ** | |||||||
6106177-T-C | 6238136-T-C | ** | |||||||
6234412-T-C | 6366371-T-C | IR3_Dst | ** | ||||||
6234448-T-G | 6366407-T-G | IR3_Dst | ** | ||||||
6234463-A-G | 6366422-A-G | IR3_Dst | ** | ||||||
6268772-A-AC | 6400731-A-AC | IR3_Dst | ** | ||||||
6383315-T-C | 6515274-T-C | ** | |||||||
6446334-G-A | 6578293-G-A | ** | |||||||
6446344-A-G | 6578303-A-G | ** | |||||||
6446413-T-A | 6578372-T-A | ** | |||||||
6584425-A-T | 6716384-A-T | ** | |||||||
6642937-T-C | 6774896-T-C | ** | |||||||
6729682-T-G | 6861641-T-G | ** | |||||||
6729686-T-C | 6861645-T-C | ** | |||||||
6771608-T-C | 6903567-T-C | ** | |||||||
6776426-G-A | 6908385-G-A | ** | |||||||
6791196-C-T | 6923155-C-T | ** | |||||||
6888467-C-T | 7020426-C-T | ** | |||||||
6903704-C-A | 7035663-C-A | ** | |||||||
6918368-C-A | 7050327-C-A | ** | |||||||
7058090-A-G | 7190049-A-G | ** | |||||||
7102552-T-A | 7234511-T-A | ** | |||||||
7182252-T-G | 7314211-T-G | ** | |||||||
7207462-T-G | 7339421-T-G | ** | |||||||
7231105-A-T | 7363064-A-T | ** | |||||||
7234939-A-C | 7366898-A-C | ** | |||||||
7235061-A-T | 7367020-A-T | ** | |||||||
7243246-T-C | 7375205-T-C | ** | |||||||
7301540-T-C | 7433499-T-C | ** | |||||||
7314488-A-G | 7446447-A-G | ** | |||||||
7383632-T-G | 7515591-T-G | ** | |||||||
7383644-A-C | 7515603-A-C | ** | |||||||
7383650-A-T | 7515609-A-T | ** | |||||||
7383655-A-G | 7515614-A-G | ** | |||||||
7383663-C-G | 7515622-C-G | FT62777 | ** | ||||||
7383688-T-G | 7515647-T-G | ** | |||||||
7383695-A-G | 7515654-A-G | ** | |||||||
7383723-G-C | 7515682-G-C | FT397879 | ** | ||||||
7383732-A-C | 7515691-A-C | ** | |||||||
7383743-C-G | 7515702-C-G | ** | |||||||
7433451-A-C | 7565410-A-C | ** | |||||||
7433527-T-A | 7565486-T-A | ** | |||||||
7433571-G-T | 7565530-G-T | ** | |||||||
7433577-G-C | 7565536-G-C | ** | |||||||
7470565-T-G | 7602524-T-G | IR1_L | ** | ||||||
7579007-G-C | 7710966-G-C | ** | |||||||
7705082-ACCCT-A | 7837041-ACCCT-A | ** | |||||||
7705144-G-A | 7837103-G-A | ** | |||||||
7861425-G-A | 7993384-G-A | ** | |||||||
7866526-C-T | 7998485-C-T | ** | |||||||
8094507-T-A | 8226466-T-A | ** | |||||||
8130484-A-T | 8262443-A-T | ** | |||||||
8269696-G-C | 8401655-G-C | ** | |||||||
8661688-T-C | 8793647-T-C | ** | |||||||
8673305-T-A | 8805264-T-A | ** | |||||||
8706021-T-G | 8837980-T-G | ** | |||||||
8762114-T-C | 8894073-T-C | ** | |||||||
8850114-G-T | 8982073-G-T | ** | |||||||
8897219-T-C | 9029178-T-C | ** | |||||||
9107842-C-A | ** | ||||||||
8996090-A-G | 9158481-A-G | ** | |||||||
9044122-T-A | 9206513-T-A | ** | |||||||
9048642-G-T | 9211033-G-T | ** | |||||||
9048655-G-C | 9211046-G-C | ** | |||||||
9073916-T-C | 9236307-T-C | ** | |||||||
9312842-G-T | 9475233-G-T | ** | |||||||
9312851-A-C | 9475242-A-C | ** | |||||||
9474639-G-T | 9637030-G-T | ** | |||||||
9524181-T-C | 9686572-T-C | ** | |||||||
9732862-T-C | 9895253-T-C | IR3_Prx | ** | ||||||
9793441-G-A | 9955832-G-A | ** | |||||||
9793445-A-T | 9955836-A-T | 10×T | ** | ||||||
9847343-A-G | 10009734-A-G | ** | |||||||
9885145-A-T | 10047536-A-T | ** | |||||||
9928174-T-C | 10090565-T-C | ** | |||||||
10005987-TC-T | 10168378-TC-T | ** | |||||||
10026340-T-A | 10188731-T-A | ** | |||||||
10046126-C-A | 10208517-C-A | ** | |||||||
10080991-G-T | 10243382-G-T | ** | |||||||
10657677-A-C | ** | ||||||||
10661600-A-C | ** | ||||||||
10662292-A-T | ** | ||||||||
10672150-T-G | ** | ||||||||
10673266-A-T | ** | ||||||||
10678668-C-T | ** | ||||||||
10688614-C-A | ** | ||||||||
10688644-C-A | ** | ||||||||
10692590-TCCATTTATTC-T | ** | ||||||||
10693573-A-G | ** | ||||||||
10693610-T-G | ** | ||||||||
10693760-A-C | ** | ||||||||
10693762-T-A | ** | ||||||||
10744581-T-C | FT183023 | ** | |||||||
10745061-C-A | ** | ||||||||
10751056-C-G | ** | ||||||||
10751903-C-T | ** | ||||||||
10756342-C-G | ** | ||||||||
10764857-C-T | ** | ||||||||
10766728-A-G | ** | ||||||||
10767089-A-C | ** | ||||||||
10767287-G-T | ** | ||||||||
10775396-C-A | ** | ||||||||
10776772-A-G | ** | ||||||||
10778725-A-T | ** | ||||||||
10786180-G-A | ** | ||||||||
10787279-C-T | ** | ||||||||
10788596-A-T | ** | ||||||||
10789636-C-A | ** | ||||||||
10794807-A-T | ** | ||||||||
10818511-C-A | ** | ||||||||
10819242-A-C | ** | ||||||||
10835531-C-CCATTT | ** | ||||||||
10835632-C-A | ** | ||||||||
10852627-T-A | ** | ||||||||
10862789-T-A | ** | ||||||||
10874804-CT-C | ** | ||||||||
10877715-C-A | ** | ||||||||
10881591-A-C | ** | ||||||||
10896062-A-C | ** | ||||||||
10896064-T-C | ** | ||||||||
10896068-CT-C | ** | ||||||||
10906219-ATGATG-A | ** | ||||||||
10911592-C-T | ** | ||||||||
10919100-G-T | ** | ||||||||
10931110-C-G | ** | ||||||||
10932420-A-AT | ** | ||||||||
10932434-C-T | ** | ||||||||
10932444-C-T | ** | ||||||||
10932689-C-G | ** | ||||||||
10938571-T-C | ** | ||||||||
10948225-C-A | ** | ||||||||
10954629-G-C | ** | ||||||||
10955869-T-G | ** | ||||||||
10958039-T-C | ** | ||||||||
10967967-C-G | ** | ||||||||
10969118-T-C | ** | ||||||||
10971604-A-T | ** | ||||||||
10978530-A-T | ** | ||||||||
10979865-T-C | ** | ||||||||
10983990-C-G | ** | ||||||||
10984521-A-G | ** | ||||||||
10987638-C-A | ** | ||||||||
10998377-A-G | ** | ||||||||
10998451-A-C | ** | ||||||||
11000872-C-A | ** | ||||||||
11005325-C-A | ** | ||||||||
11024624-A-G | ** | ||||||||
13218600-G-A | 11062924-G-A | ** | |||||||
13226313-A-T | 11070637-A-T | ** | |||||||
13228142-G-T | 11072466-G-T | ** | |||||||
13235453-A-G | 11079777-A-G | ** | |||||||
13252562-A-C | 11096886-A-C | ** | |||||||
13255442-G-C | 11099766-G-C | ** | |||||||
13259072-C-T | 11103396-C-T | ** | |||||||
13294178-T-C | 11138502-T-C | ** | |||||||
13316138-C-T | 11160462-C-T | ** | |||||||
13355056-G-A | 11199380-G-A | ** | |||||||
13462806-G-A | 11307130-G-A | BY85636 | ** | ||||||
13498180-T-C | 11342504-T-C | ** | |||||||
13498253-A-G | 11342577-A-G | ** | |||||||
13506993-C-G | 11351317-C-G | ** | |||||||
13566641-A-G | 11410965-A-G | ** | |||||||
13566673-C-T | 11410997-C-T | ** | |||||||
13566771-T-C | 11411095-T-C | ** | |||||||
11645534-AT-A | ** | ||||||||
11646449-A-T | ** | ||||||||
11647106-G-C | ** | ||||||||
11669795-G-A | ** | ||||||||
11669818-T-C | ** | ||||||||
13908336-A-T | 11787630-A-T | ** | |||||||
13919273-T-G | 11798567-T-G | ** | |||||||
13932517-T-G | 11811811-T-G | ** | |||||||
13961829-T-A | 11841123-T-A | ** | |||||||
14020225-TAATGTTAAA-T | 11899519-TAATGTTAAA-T | ** | |||||||
14051871-G-T | 11931165-G-T | ** | |||||||
14108905-C-G | 11988199-C-G | ** | |||||||
14123499-A-G | 12002793-A-G | ** | |||||||
14123727-T-G | 12003021-T-G | ** | |||||||
14285011-C-A | 12164305-C-A | ** | |||||||
14286918-G-T | 12166212-G-T | ** | |||||||
14301930-T-C | 12181224-T-C | ** | |||||||
14301936-G-A | 12181230-G-A | ** | |||||||
14302006-T-C | 12181300-T-C | ** | |||||||
14308154-C-T | 12187448-C-T | ** | |||||||
14420493-GTCTATAACC-G | 12299768-GTCTATAACC-G | ** | |||||||
14471725-A-T | 12350994-A-T | ** | |||||||
14471771-A-G | 12351040-A-G | ** | |||||||
14482202-T-C | 12361471-T-C | ** | |||||||
14482204-G-C | 12361473-G-C | ** | |||||||
14482238-C-T | 12361507-C-T | ** | |||||||
12370733-A-G | ** | ||||||||
14506976-A-T | 12395181-A-T | ** | |||||||
14506989-A-C | 12395194-A-C | ** | |||||||
14570750-A-T | 12458950-A-T | ** | |||||||
14639156-C-G | 12527225-C-G | ** | |||||||
14711768-T-C | 12599835-T-C | ** | |||||||
14716695-A-G | 12604763-A-G | ** | |||||||
14748747-C-A | 12636816-C-A | ** | |||||||
14802885-A-T | 12690956-A-T | ** | |||||||
14802958-T-G | 12691029-T-G | ** | |||||||
14825192-T-A | 12713259-T-A | ** | |||||||
14953534-T-G | 12841608-T-G | ** | |||||||
15137817-A-T | 13025904-A-T | ** | |||||||
15172043-G-A | 13060129-G-A | ** | |||||||
15248932-C-A | 13137018-C-A | ** | |||||||
15280705-T-A | 13168804-T-A | ** | |||||||
15301811-T-A | 13189910-T-A | ** | |||||||
15332193-G-A | 13220311-G-A | ** | |||||||
15332200-T-A | 13220318-T-A | ** | |||||||
15341933-G-T | 13230052-G-T | ** | |||||||
15391393-G-A | 13279513-G-A | ** | |||||||
15391409-T-G | 13279529-T-G | ** | |||||||
15391411-A-G | 13279531-A-G | ** | |||||||
15449922-G-T | 13338042-G-T | ** | |||||||
15469290-G-A | 13357410-G-A | ** | |||||||
15536211-A-T | 13424331-A-T | ** | |||||||
15706953-TTACCAGC-T | 13595073-TTACCAGC-T | ** | |||||||
15742408-A-T | 13630528-A-T | ** | |||||||
15742447-T-C | 13630567-T-C | ** | |||||||
15760096-C-A | 13648216-C-A | ** | |||||||
15767039-A-C | 13655159-A-C | ** | |||||||
15767056-C-T | 13655176-C-T | ** | |||||||
15844535-G-C | 13732655-G-C | ** | |||||||
15870401-A-T | 13758521-A-T | FT329784 | ** | ||||||
15870427-A-C | 13758547-A-C | ** | |||||||
15921339-A-G | 13809459-A-G | ** | |||||||
15939300-C-A | 13827420-C-A | ** | |||||||
16002322-C-A | 13890442-C-A | ** | |||||||
16002896-T-C | 13891016-T-C | ** | |||||||
16108701-T-TCTTTC | 13996821-T-TCTTTC | P8_Prx | ** | ||||||
16147491-A-AC | 14035611-A-AC | P8_Dst | ** | ||||||
16177309-G-A | 14065429-G-A | ** | |||||||
16259052-T-C | 14147172-T-C | ** | |||||||
16272380-A-G | 14160500-A-G | ** | |||||||
16354899-T-A | 14243019-T-A | ** | |||||||
16354911-T-C | 14243031-T-C | ** | |||||||
16354946-T-G | 14243066-T-G | ** | |||||||
16354979-A-C | 14243099-A-C | ** | |||||||
16422877-A-G | 14310997-A-G | ** | |||||||
16427690-C-A | 14315810-C-A | ** | |||||||
16429220-A-T | 14317340-A-T | ** | |||||||
16470265-G-T | 14358385-G-T | ** | |||||||
16653011-A-G | 14541131-A-G | ** | |||||||
16789605-T-A | 14677725-T-A | ** | |||||||
16961491-T-G | 14849611-T-G | ** | |||||||
17006169-C-T | 14894289-C-T | ** | |||||||
17079137-A-T | 14967257-A-T | ** | |||||||
17130436-C-A | 15018556-C-A | ** | |||||||
17146570-A-G | 15034690-A-G | ** | |||||||
17188216-A-T | 15076336-A-T | ** | |||||||
17206601-A-C | 15094721-A-C | ** | |||||||
17218220-G-C | 15106340-G-C | ** | |||||||
17257232-T-A | 15145352-T-A | ** | |||||||
17263272-C-G | 15151392-C-G | ** | |||||||
17277313-G-A | 15165433-G-A | ** | |||||||
17277334-A-C | 15165454-A-C | ** | |||||||
17346510-G-A | 15234630-G-A | ** | |||||||
17426296-C-T | 15314416-C-T | ** | |||||||
17466627-G-C | 15354747-G-C | ** | |||||||
17503238-G-T | 15391358-G-T | ** | |||||||
17534685-C-T | 15422805-C-T | ** | |||||||
17567354-C-A | 15455474-C-A | ** | |||||||
17575190-A-G | 15463310-A-G | ** | |||||||
17646870-G-A | 15534990-G-A | ** | |||||||
17737440-C-T | 15625560-C-T | ** | |||||||
17739963-C-G | 15628083-C-G | ** | |||||||
17739964-C-T | 15628084-C-T | ** | |||||||
17739999-T-C | 15628119-T-C | ** | |||||||
17770623-T-C | 15658743-T-C | ** | |||||||
17862651-G-T | 15750771-G-T | ** | |||||||
17870928-T-G | 15759048-T-G | ** | |||||||
17897984-T-G | 15786104-T-G | ** | |||||||
17912990-G-C | 15801110-G-C | ** | |||||||
17952717-A-C | 15840837-A-C | ** | |||||||
18050394-T-A | 15938514-T-A | ** | |||||||
18071512-A-T | 15959632-A-T | ** | |||||||
18151805-T-C | 16039925-T-C | ** | |||||||
18194183-G-C | 16082303-G-C | ** | |||||||
18194212-T-A | 16082332-T-A | ** | |||||||
18329091-A-T | 16217211-A-T | P6_Prx | ** | ||||||
18365606-C-T | 16253726-C-T | P6_Prx | ** | ||||||
18384340-A-G | 16272460-A-G | P6_Gap | ** | ||||||
18511488-T-C | 16399608-T-C | P6_Dst | ** | ||||||
18627667-A-G | 16515787-A-G | ** | |||||||
18654812-A-G | 16542932-A-G | ** | |||||||
18728602-C-A | 16616722-C-A | FT24413 | ** | ||||||
18729023-C-G | 16617143-C-G | ** | |||||||
18729076-C-A | 16617196-C-A | ** | |||||||
18730397-T-A | 16618517-T-A | ** | |||||||
18826594-A-G | 16714714-A-G | ** | |||||||
18831568-C-A | 16719688-C-A | ** | |||||||
18853503-C-G | 16741623-C-G | ** | |||||||
18879963-GGGAAGGAT-G | 16768083-GGGAAGGAT-G | ** | |||||||
18908102-G-A | 16796222-G-A | ** | |||||||
18937258-A-T | 16825378-A-T | ** | |||||||
18937275-A-C | 16825395-A-C | ** | |||||||
18937281-C-G | 16825401-C-G | ** | |||||||
18952998-A-T | 16841118-A-T | ** | |||||||
19031429-T-G | 16919549-T-G | ** | |||||||
19042618-G-A | 16930738-G-A | ** | |||||||
19088069-C-T | 16976189-C-T | ** | |||||||
19183512-A-C | 17071632-A-C | ** | |||||||
19203994-T-C | 17092114-T-C | ** | |||||||
19216627-T-G | 17104747-T-G | ** | |||||||
19233019-C-A | 17121139-C-A | ** | |||||||
19253230-A-G | 17141350-A-G | ** | |||||||
19274741-T-C | 17162861-T-C | ** | |||||||
19274770-G-C | 17162890-G-C | ** | |||||||
19275294-T-G | 17163414-T-G | ** | |||||||
19304636-C-T | 17192756-C-T | ** | |||||||
19339964-C-A | 17228084-C-A | ** | |||||||
19416799-A-G | 17304919-A-G | ** | |||||||
19462633-C-A | 17350753-C-A | ** | |||||||
19498047-A-T | 17386167-A-T | ** | |||||||
19523442-A-C | 17411562-A-C | ** | |||||||
19539587-T-G | 17427707-T-G | ** | |||||||
19611985-T-A | 17500105-T-A | P5_Prx | ** | ||||||
19612001-C-G | 17500121-C-G | P5_Prx | ** | ||||||
19612058-A-AT | 17500178-A-AT | P5_Prx | ** | ||||||
19663384-C-T | 17551504-C-T | P5_Prx | ** | ||||||
19792602-T-A | 17680722-T-A | P5_Prx | ** | ||||||
20049278-A-AC | 17937398-A-AC | P5_Prx | ** | ||||||
20376557-A-C | 18214671-A-C | P5_Dst | ** | ||||||
20376563-T-G | 18214677-T-G | P5_Dst | ** | ||||||
20376570-T-C | 18214684-T-C | P5_Dst | ** | ||||||
20376627-G-A | 18214741-G-A | P5_Dst | ** | ||||||
20376673-G-T | 18214787-G-T | P5_Dst | ** | ||||||
20424728-C-G | 18262842-C-G | P5_Dst | ** | ||||||
20424834-A-T | 18262948-A-T | P5_Dst | ** | ||||||
20611319-T-G | 18449433-T-G | P5_Dst | ** | ||||||
20726881-T-G | 18564995-T-G | P4_Prx | ** | ||||||
20726902-A-G | 18565016-A-G | P4_Prx | ** | ||||||
20751569-A-C | 18589683-A-C | P4_Prx | ** | ||||||
21154101-T-G | 18992215-T-G | ** | |||||||
21208963-A-G | 19047077-A-G | ** | |||||||
21211874-G-A | 19049988-G-A | ** | |||||||
21244087-CAAAAGGT-C | 19082201-CAAAAGGT-C | ** | |||||||
21244898-G-T | 19083012-G-T | ** | |||||||
21297243-G-T | 19135357-G-T | ** | |||||||
21324265-C-A | 19162379-C-A | ** | |||||||
21337402-T-A | 19175516-T-A | ** | |||||||
21337478-G-C | 19175592-G-C | ** | |||||||
21459942-AT-A | 19298056-AT-A | ** | |||||||
21512351-A-G | 19350465-A-G | ** | |||||||
21512363-G-T | 19350477-G-T | ** | |||||||
21623838-GTA-T | 19461952-GTA-T | ** | |||||||
21795159-T-G | 19633273-T-G | ** | |||||||
21795269-G-A | 19633383-G-A | ** | |||||||
21830803-A-C | 19668917-A-C | ** | |||||||
21834007-A-T | 19672121-A-T | ** | |||||||
21834021-T-C | 19672135-T-C | ** | |||||||
21839985-T-A | 19678099-T-A | ** | |||||||
21839994-T-G | 19678108-T-G | ** | |||||||
22011627-T-G | 19849741-T-G | ** | |||||||
22052732-C-A | 19890846-C-A | ** | |||||||
22076863-T-C | 19914977-T-C | ** | |||||||
22092692-G-C | 19930806-G-C | ** | |||||||
22149926-A-C | 19988040-A-C | ** | |||||||
22166676-A-C | 20004790-A-C | ** | |||||||
22269680-G-C | 20107794-G-C | DYZ19 | ** | ||||||
22443357-A-T | 20281471-A-T | DYZ19 | ** | ||||||
22445779-T-A | 20283893-T-A | DYZ19 | ** | ||||||
22458058-C-T | 20296172-C-T | DYZ19 | ** | ||||||
22458785-G-T | 20296899-G-T | DYZ19 | ** | ||||||
22640401-T-C | 20478515-T-C | ** | |||||||
22803957-G-C | 20642071-G-C | ** | |||||||
22803986-A-G | 20642100-A-G | ** | |||||||
22855658-CTGT-C | 20693772-CTGT-C | ** | |||||||
22997034-A-G | 20835148-A-G | ** | |||||||
22997043-T-A | 20835157-T-A | ** | |||||||
23062347-G-C | 20900461-G-C | ** | |||||||
23081983-C-A | 20920097-C-A | ** | |||||||
23202366-T-C | 21040480-T-C | ** | |||||||
23208119-T-A | 21046233-T-A | ** | |||||||
23252568-C-A | 21090682-C-A | ** | |||||||
23355266-T-G | 21193380-T-G | ** | |||||||
23355359-G-T | 21193473-G-T | ** | |||||||
23425179-A-G | 21263293-A-G | ** | |||||||
23425183-A-C | 21263297-A-C | ** | |||||||
23425262-G-T | 21263376-G-T | ** | |||||||
23425264-A-T | 21263378-A-T | ** | |||||||
23425267-C-T | 21263381-C-T | ** | |||||||
23447353-C-A | 21285467-C-A | ** | |||||||
23514471-T-TTC | 21352585-T-TTC | ** | |||||||
23523648-T-C | 21361762-T-C | ** | |||||||
23885310-A-C | 21723424-A-C | ** | |||||||
21753483-G-T | ** | ||||||||
24014313-T-C | 21868166-T-C | ** | |||||||
24014314-A-C | 21868167-A-C | ** | |||||||
24014324-T-C | 21868177-T-C | ** | |||||||
24014328-T-C | 21868181-T-C | ** | |||||||
24014332-G-T | 21868185-G-T | ** | |||||||
24014346-A-T | 21868199-A-T | ** | |||||||
24014354-A-C | 21868207-A-C | ** | |||||||
24014356-C-G | 21868209-C-G | ** | |||||||
24014366-A-T | 21868219-A-T | ** | |||||||
24014369-T-C | 21868222-T-C | ** | |||||||
24014378-T-G | 21868231-T-G | ** | |||||||
24014379-G-T | 21868232-G-T | ** | |||||||
24014381-A-T | 21868234-A-T | ** | |||||||
24014383-A-G | 21868236-A-G | ** | |||||||
24014402-A-C | 21868255-A-C | ** | |||||||
24014413-C-T | 21868266-C-T | ** | |||||||
24014417-G-C | 21868270-G-C | ** | |||||||
24262107-C-CCT | 22115960-C-CCT | P3_b1 | ** | ||||||
24512659-G-C | 22366512-G-C | ** | |||||||
24573442-T-A | 22427295-T-A | P3_t2 | ** | ||||||
24573455-T-C | 22427308-T-C | P3_t2 | ** | ||||||
24573458-C-T | 22427311-C-T | P3_t2 | ** | ||||||
24613956-G-GTA | 22467809-G-GTA | P3_t2 | ** | ||||||
25533394-T-C | 23387247-T-C | P1_gr1 | ** | ||||||
25533396-G-T | 23387249-G-T | P1_gr1 | ** | ||||||
25533452-A-T | 23387305-A-T | P1_gr1 | ** | ||||||
25533466-A-T | 23387319-A-T | P1_gr1 | ** | ||||||
25537676-A-C | 23391529-A-C | P1_gr1 | ** | ||||||
25537687-T-C | 23391540-T-C | P1_gr1 | ** | ||||||
25537705-A-G | 23391558-A-G | P1_gr1 | ** | ||||||
25537723-T-C | 23391576-T-C | P1_gr1 | ** | ||||||
25913332-C-G | 23767185-C-G | P1_Y1 | ** | ||||||
25913357-G-A | 23767210-G-A | P1_Y1 | ** | ||||||
25944747-T-A | 23798600-T-A | P1_Y1 | ** | ||||||
26062835-T-TA | 23916688-T-TA | P1_Y1 | ** | ||||||
26133212-G-T | 23987065-G-T | P1_Y1 | ** | ||||||
26224808-TATA-T | 24078661-TATA-T | P1_Y1 | ** | ||||||
26477994-T-A | 24331847-T-A | P1_Y1 | ** | ||||||
26478046-T-A | 24331899-T-A | P1_Y1 | ** | ||||||
27384151-G-T | 25238004-G-T | P1_g3 | ** | ||||||
27677599-A-T | 25531452-A-T | P1_Y2 | ** | ||||||
27677635-A-C | 25531488-A-C | P1_Y2 | ** | ||||||
27971710-G-A | 25825563-G-A | P1_Y2 | ** | ||||||
28479657-G-A | 26333510-G-A | ** | |||||||
28485346-TTATG-T | 26339199-TTATG-T | ** | |||||||
28486205-A-C | 26340058-A-C | ** | |||||||
28539618-C-A | 26393471-C-A | ** | |||||||
28701419-A-G | 26555272-A-G | ** | |||||||
28728414-T-G | 26582267-T-G | ** | |||||||
28744600-G-T | 26598453-G-T | ** | |||||||
28793787-T-G | 26647640-T-G | ** | |||||||
28797896-T-A | 26651749-T-A | ** | |||||||
56840109-C-A | ** | ||||||||
13041-G-T | ** | ||||||||
16071-A-T | ** | ||||||||
23389568-G-T | 21227682-G-T | BY4114 | BY4129 | *** | |||||
20132205-T-C | 18020325-T-C | BY160914 | P5_Dst | *** | |||||
13141807-T-G | 10631293-T-G | *** | |||||||
23081878-CGCCATGTTGGT-AGCCATGTTGGT,C | 20919992-CGCCATGTTGGT-AGCCATGTTGGT,C | *** | |||||||
9777506-TCAA-T | 9939897-TCAA-T | *** | |||||||
7935839-G-A | 8067798-G-A | *** | |||||||
22190547-C-A | 20028661-C-A | *** | |||||||
23435202-C-CT | 21273316-C-CT | *** | |||||||
8151443-A-ATG | 8283402-A-ATG | *** | |||||||
15396704-C-A | 13284824-C-A | *** | |||||||
17278090-C-A | 15166210-C-A | *** | |||||||
10983490-C-A | *** | ||||||||
17678649-C-T | 15566769-C-T | *** | |||||||
10937502-T-A,C | *** | ||||||||
17014785-C-A | 14902905-C-A | *** | |||||||
13478363-CG-C | 11322687-CG-C | *** | |||||||
18589717-A-G | 16477837-A-G | *** | |||||||
2707419-TAAA-T | 2839378-TAAA-T | 14×A | *** | ||||||
10663163-G-T | *** | ||||||||
11005252-C-A | *** | ||||||||
3251335-A-G | 3383294-A-G | *** | |||||||
3688923-C-A | 3820882-C-A | *** | |||||||
5186809-T-C | 5318768-T-C | *** | |||||||
6040146-A-C | 6172105-A-C | *** | |||||||
7204730-A-G | 7336689-A-G | *** | |||||||
7939186-C-A | 8071145-C-A | *** | |||||||
8736273-A-C | 8868232-A-C | *** | |||||||
8751072-ATGTGTATATATATATAT-A | 8883031-ATGTGTATATATATATAT-A | *** | |||||||
9020534-G-T | 9182925-G-T | *** | |||||||
9318207-G-C | 9480598-G-C | *** | |||||||
9873861-G-T | 10036252-G-T | *** | |||||||
10663176-G-T | *** | ||||||||
10819369-A-G,T | *** | ||||||||
10955073-T-C | *** | ||||||||
10955077-A-T | *** | ||||||||
10971981-C-A,T | *** | ||||||||
11018122-CCA-C | *** | ||||||||
13865787-A-G | 11745081-A-G | *** | |||||||
14143458-T-A | 12022752-T-A | *** | |||||||
14174575-T-C | 12053869-T-C | *** | |||||||
14761214-T-C | 12649283-T-C | *** | |||||||
14808433-C-A | 12696504-C-A | *** | |||||||
15145001-A-G | 13033088-A-G | *** | |||||||
15168780-A-G | 13056866-A-G | *** | |||||||
15178057-G-A | 13066143-G-A | *** | |||||||
15211226-G-T | 13099312-G-T | *** | |||||||
15430527-T-C | 13318647-T-C | *** | |||||||
15669912-A-G | 13558032-A-G | *** | |||||||
16134276-T-C | 14022396-T-C | *** | |||||||
16855191-G-A | 14743311-G-A | *** | |||||||
17386638-T-A | 15274758-T-A | *** | |||||||
17545656-T-C | 15433776-T-C | *** | |||||||
18050091-G-A | 15938211-G-A | *** | |||||||
18177334-G-C | 16065454-G-C | *** | |||||||
18185864-T-A | 16073984-T-A | *** | |||||||
18892279-T-TT,TTA | 16780399-T-TT,TTA | *** | |||||||
18892280-ATT-A,AT | 16780400-ATT-A,AT | *** | |||||||
18925105-A-G | 16813225-A-G | *** | |||||||
19436109-C-A | 17324229-C-A | *** | |||||||
20359544-C-T | 18197658-C-T | P5_Dst | *** | ||||||
20833099-C-A | 18671213-C-A | P4_Gap | *** | ||||||
21773935-T-A | 19612049-T-A | *** | |||||||
22207435-C-A | 20045549-C-A | *** | |||||||
22661072-A-C | 20499186-A-C | *** | |||||||
23081878-C-A | 20919992-C-A | *** | |||||||
23081878-CGCCATGTTGGT-C | 20919992-CGCCATGTTGGT-C | *** | |||||||
23493595-A-T | 21331709-A-T | *** | |||||||
28506836-C-G | 26360689-C-G | *** | |||||||
56850685-C-A | *** | ||||||||
56851221-T-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.