Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > ZP112 > BY23430

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
189765
BigY2
189765
6148714-C-A 6280673-C-A IR3_Dst A*
7558970-T-G 7690929-T-G YYA*
28817647-A-AGGAAT 26671500-A-AGGAAT 9×GGAATA*
28817226-T-G 26671079-T-G A*
22292097-G-C 20130211-G-C DYZ19 ***A*
6186079-G-C 6318038-G-C IR3_Dst ***A*
13687168-C-A 11531492-C-A A*
16111847-C-A 13999967-C-A P8_Prx A*
16503850-T-C 14391970-T-C BY108230 YY++
28813399-G-C 26667252-G-C BY152134 ***+
21813686-A-T 19651800-A-T BY135644 YY++
19213969-C-A 17102089-C-A BY127301 YY++
7073769-T-C 7205728-T-C BY63210 YY++
22422475-T-A 20260589-T-A BY26433 DYZ19 *
22303951-A-G 20142065-A-G DYZ19 *
18096283-G-A 15984403-G-A Z19998 YP4765 YY****
22235240-G-C 20073354-G-C DYZ19 ****
15942760-G-GTAGA 13830880-G-GTAGA 7×TAGA****
10906600-T-C **
10852566-C-A **
10961608-A-C **
10856517-A-C **
10962599-A-AC **
10969796-C-A **
10972827-C-A **
10975089-C-G **
10989595-A-G **
10989611-T-C **
10991037-C-A **
10961257-A-T **
10991957-C-A **
11005520-C-CT **
11009160-C-T **
11013550-T-G **
11014211-A-C **
11018292-C-A **
11019905-G-C **
11022664-C-T **
10902547-A-C **
10902548-C-A **
10955252-A-G **
10958154-T-A **
10904161-G-T **
10920020-C-A **
10870858-A-T **
10928527-T-A **
10928814-C-G **
10929914-C-G **
10936378-A-G **
10937580-C-A **
10939649-G-A **
10866845-T-G **
10941021-C-T **
10917993-T-C **
10944387-G-C **
10950085-C-A **
11023199-T-C **
10878560-C-A **
10903855-T-A **
10900084-A-G **
10950174-T-A **
10858027-C-T **
10950205-A-C **
10899605-A-G **
11037694-A-C **
11023208-G-A **
13946056-G-C 11825350-G-C **
11670788-A-G **
11670800-A-T **
11670805-G-C **
11670821-T-C **
11670823-G-A **
11670833-G-A **
11670864-A-G **
13927063-A-T 11806357-A-T **
13938772-T-A 11818066-T-A **
14042682-G-T 11921976-G-T **
11670781-T-G **
14053361-G-T 11932655-G-T **
14059324-A-G 11938618-A-G **
14074084-G-T 11953378-G-T **
14180655-C-A 12059949-C-A **
14246730-C-A 12126024-C-A **
14251867-C-A 12131161-C-A **
14261719-A-C 12141013-A-C **
14269757-C-T 12149051-C-T **
14272373-A-C 12151667-A-C **
14283309-C-A 12162603-C-A **
11670785-T-A **
11670760-A-C **
11024813-G-T **
13225825-A-G 11070149-A-G **
11026752-C-T **
11032503-C-A **
11032785-A-T **
11032893-T-C **
11035065-A-C **
10850794-G-T **
13196530-C-A 11040854-C-A **
13196570-C-A 11040894-C-A **
13216663-C-A 11060987-C-A **
13252708-C-T 11097032-C-T **
11670751-C-T **
13263373-G-T 11107697-G-T **
13264700-C-A 11109024-C-A **
13612980-C-A 11457304-C-A **
13726158-A-C 11570482-A-C **
13726178-G-C 11570502-G-C **
13726184-T-C 11570508-T-C **
11652061-G-A **
11656658-G-T **
11663683-C-A **
11670140-A-G **
10851376-G-A **
10841893-C-G **
10846898-C-T **
8749070-G-T 8881029-G-T **
7433990-G-T 7565949-G-T **
7784490-T-G 7916449-T-G **
7784520-T-G 7916479-T-G **
7898093-C-A 8030052-C-A **
8077011-C-T 8208970-C-T **
8079557-C-A 8211516-C-A **
8214225-A-C 8346184-A-C **
8344408-T-G 8476367-T-G **
8345857-C-A 8477816-C-A **
9110717-G-T **
7308332-C-T 7440291-C-T **
9113841-T-G **
9113873-T-G **
9015833-A-C 9178224-A-C **
9040363-T-G 9202754-T-G **
9048060-C-T 9210451-C-T **
9048074-C-G 9210465-C-G **
9048080-A-G 9210471-A-G **
9075168-A-G 9237559-A-G **
9076849-G-C 9239240-G-C **
9077015-T-C 9239406-T-C **
7314590-A-C 7446549-A-C **
7270303-AG-T 7402262-AG-T **
9094337-A-C 9256728-A-C **
6392683-C-T 6524642-C-T **
5670475-T-C 5802434-T-C **
5775615-C-G 5907574-C-G **
5816970-A-C 5948929-A-C **
5841621-G-T 5973580-G-T **
5844950-A-T 5976909-A-T **
5847018-C-A 5978977-C-A **
5851965-G-C 5983924-G-C **
5921611-A-T 6053570-A-T **
6137895-A-G 6269854-A-G IR3_Dst **
6335124-T-A 6467083-T-A IR3_Dst **
6434505-A-T 6566464-A-T **
7257664-T-C 7389623-T-C **
6767760-A-G 6899719-A-G **
6767761-T-C 6899720-T-C **
6770911-C-G 6902870-C-G **
6903655-A-T 7035614-A-T **
7030594-T-A 7162553-T-A **
7030882-C-T 7162841-C-T **
7088502-G-A 7220461-G-A **
7101099-G-T 7233058-G-T **
7138165-T-C 7270124-T-C **
7241863-C-T 7373822-C-T **
9094334-G-A 9256725-G-A **
9094339-C-T 9256730-C-T **
10846823-G-C **
10817610-A-T **
10769696-A-C **
10771217-A-G **
10771593-C-T **
10774789-C-A **
10781153-A-C **
10781392-T-G **
10782064-C-T **
10805504-C-G **
10811523-G-T **
10813088-C-A **
10818005-C-A **
10764002-C-G **
10820453-C-G **
10825402-A-C **
10826583-CCATTT-C **
10838875-C-T **
10840518-A-C **
14390618-C-A 12269914-C-A **
10841904-C-T **
10841930-A-T **
10843546-C-G **
10845767-A-T **
10764052-C-T **
10763928-A-T **
9852838-T-A 10015229-T-A **
10653986-T-C **
9929901-T-A 10092292-T-A **
9941420-A-T 10103811-A-T **
9956361-A-C 10118752-A-C **
9956397-A-T 10118788-A-T **
9956414-A-T 10118805-A-T **
10025164-A-T 10187555-A-T **
10026239-T-A 10188630-T-A **
10026780-T-A 10189171-T-A **
10056519-T-A 10218910-T-A **
10056538-A-C 10218929-A-C **
10664193-C-T **
10763907-C-T **
10686114-A-C **
10690109-T-C **
10690701-C-A **
10750224-C-T **
10753776-G-T **
10757072-C-A **
10757254-C-A **
10758262-T-A **
10762365-C-A **
10763769-T-G **
14372183-C-A 12251479-C-A **
14700811-C-T 12588877-C-T **
14427558-A-G 12306833-A-G **
21999463-T-C 19837577-T-C **
21477112-C-T 19315226-C-T **
21545437-C-A 19383551-C-A **
21588008-A-G 19426122-A-G **
21624652-A-C 19462766-A-C **
21853603-A-T 19691717-A-T **
21935096-T-G 19773210-T-G **
21941053-C-A 19779167-C-A **
21953181-T-C 19791295-T-C **
21984128-C-A 19822242-C-A **
22012404-C-G 19850518-C-G **
21428636-T-G 19266750-T-G **
22012703-G-A 19850817-G-A **
22027764-G-A 19865878-G-A **
22027786-T-C 19865900-T-C **
22028805-A-C 19866919-A-C **
22052724-C-A 19890838-C-A **
22055427-C-A 19893541-C-A **
22137109-C-G 19975223-C-G **
22335178-A-T 20173292-A-T DYZ19 **
22335180-C-A 20173294-C-A DYZ19 **
22335186-A-G 20173300-A-G DYZ19 **
21447694-C-A 19285808-C-A **
21262760-G-T 19100874-G-T **
22521133-C-A 20359247-C-A **
19460125-T-C 17348245-T-C **
18867363-TG-T 16755483-TG-T **
18951577-C-A 16839697-C-A **
18996447-C-T 16884567-C-T **
19040784-C-T 16928904-C-T **
19042495-A-G 16930615-A-G **
19065395-G-A 16953515-G-A **
19183849-GA-G 17071969-GA-G **
19302415-T-C 17190535-T-C **
19318173-AGT-A 17206293-AGT-A **
19463693-T-G 17351813-T-G **
21187418-C-A 19025532-C-A **
19568175-A-G 17456295-A-G P5_Prx **
19604851-A-G 17492971-A-G P5_Prx **
19677905-C-CGA 17566025-C-CGA P5_Prx **
19719342-A-G 17607462-A-G P5_Prx **
19751266-A-C 17639386-A-C P5_Prx **
19982025-G-T 17870145-G-T P5_Prx **
20255103-A-AC 18093217-A-AC P5_Dst **
20570399-A-C 18408513-A-C P5_Dst **
20614693-T-G 18452807-T-G P4_Prx **
20959044-C-T 18797158-C-T P4_Dst **
22335193-T-G 20173307-T-G DYZ19 **
22658527-T-C 20496641-T-C **
18687521-A-T 16575641-A-T **
28556293-T-A 26410146-T-A **
26538857-T-A 24392710-T-A P1_g2 **
26538865-A-AAT 24392718-A-AAT P1_g2 **
27914803-C-T 25768656-C-T P1_Y2 **
28099674-C-A 25953527-C-A P1_Y2 **
28479778-CA-C 26333631-CA-C **
28496036-G-A 26349889-G-A **
28496044-T-A 26349897-T-A **
28496047-T-A 26349900-T-A **
28538892-A-G 26392745-A-G **
28635436-T-C 26489289-T-C **
26100610-A-G 23954463-A-G P1_Y1 **
28645360-C-A 26499213-C-A **
28657796-T-A 26511649-T-A **
28679681-C-A 26533534-C-A **
28742553-G-A 26596406-G-A **
28745099-C-A 26598952-C-A **
28768783-C-A 26622636-C-A **
28778948-A-T 26632801-A-T **
28778959-C-T 26632812-C-T **
56850124-G-T **
56860921-T-G **
26538849-G-C 24392702-G-C P1_g2 **
26100607-A-G 23954460-A-G BY32436 P1_Y1 **
22703581-G-T 20541695-G-T **
23505049-C-A 21343163-C-A **
22703606-A-T 20541720-A-T **
22833800-A-C 20671914-A-C **
22882399-A-G 20720513-A-G **
22882408-A-C 20720522-A-C **
23045954-C-T 20884068-C-T **
23276479-T-C 21114593-T-C **
23459644-G-T 21297758-G-T **
23475633-G-C 21313747-G-C **
23491134-C-A 21329248-C-A **
23505036-G-T 21343150-G-T **
23789587-C-A 21627701-C-A **
26025020-C-A 23878873-C-A P1_Y1 **
24264559-A-T 22118412-A-T P3_b1 **
24502350-C-G 22356203-C-G **
24502356-T-C 22356209-T-C **
24502366-A-G 22356219-A-G **
24502370-C-T 22356223-C-T **
24502379-G-C 22356232-G-C **
24634120-G-C 22487973-G-C P3_t2 **
24634133-A-C 22487986-A-C P3_t2 **
25918866-T-A 23772719-T-A P1_Y1 **
25971178-T-C 23825031-T-C P1_Y1 **
18730531-C-T 16618651-C-T **
18652426-T-C 16540546-T-C **
14483049-C-A 12362318-C-A **
15684167-C-A 13572287-C-A **
15368455-G-T 13256575-G-T **
15399090-T-C 13287210-T-C **
15479967-A-C 13368087-A-C **
15557244-C-A 13445364-C-A **
15608018-C-CA 13496138-C-CA **
15608022-G-A 13496142-G-A **
15608027-A-AT 13496147-A-AT **
15608040-A-G 13496160-A-G **
15658005-C-A 13546125-C-A **
15687677-C-T 13575797-C-T **
15361250-T-C 13249370-T-C **
15728676-T-C 13616796-T-C **
15781881-G-T 13670001-G-T **
15803503-A-G 13691623-A-G **
15903958-T-A 13792078-T-A **
15946522-C-T 13834642-C-T **
15987878-T-A 13875998-T-A **
16013106-T-G 13901226-T-G **
16016888-C-A 13905008-C-A **
16033746-T-G 13921866-T-G **
16050874-C-A 13938994-C-A **
15365328-T-C 13253448-T-C **
15151510-A-C 13039597-A-C **
16117495-T-C 14005615-T-C P8_Prx **
14788852-G-T 12676923-G-T **
14502492-C-A 12390697-C-A **
14515148-C-G 12403353-C-G **
14563546-T-G 12451746-T-G **
14618667-A-T 12506865-A-T **
14700621-C-A 12588687-C-A **
14700782-T-A 12588848-T-A **
5648557-A-G 5780516-A-G **
14714623-T-C 12602690-T-C **
14747422-C-T 12635491-C-T **
14784748-C-G 12672818-C-G **
14788854-T-C 12676925-T-C **
15126783-T-A 13014870-T-A **
14788957-A-T 12677028-A-T **
14799809-C-A 12687880-C-A **
14825860-C-G 12713927-C-G **
14825863-T-C 12713930-T-C **
14888141-A-T 12776207-A-T **
14964108-A-T 12852183-A-T **
14986068-C-A 12874136-C-A **
15012624-A-G 12900712-A-G **
15073302-G-T 12961392-G-T **
15104877-C-G 12992965-C-G **
16062068-T-C 13950188-T-C **
16117574-A-C 14005694-A-C P8_Prx **
18626083-C-T 16514203-C-T **
17848882-C-G 15737002-C-G **
17629769-T-A 15517889-T-A **
17629771-C-T 15517891-C-T **
17713896-C-G 15602016-C-G **
17821978-G-T 15710098-G-T **
17848782-G-C 15736902-G-C **
17848795-T-A 15736915-T-A **
17848840-G-C 15736960-G-C **
17848843-G-T 15736963-G-T **
17848877-A-G 15736997-A-G **
17848899-T-G 15737019-T-G **
17604933-T-TG 15493053-T-TG **
17848900-A-T 15737020-A-T **
17968957-G-A 15857077-G-A **
18053665-T-C 15941785-T-C **
18097756-T-C 15985876-T-C **
18158513-C-T 16046633-C-T **
18189636-C-T 16077756-C-T **
18243894-C-A 16132014-C-A **
18328836-G-T 16216956-G-T P6_Prx **
18544927-T-A 16433047-T-A **
18554359-C-A 16442479-C-A **
17624484-A-G 15512604-A-G **
17560453-T-C 15448573-T-C **
16117579-T-C 14005699-T-C P8_Prx **
16428605-G-C 14316725-G-C **
16117580-C-T 14005700-C-T P8_Prx **
16270835-G-T 14158955-G-T **
16271973-A-G 14160093-A-G **
16305897-C-G 14194017-C-G **
16305905-AC-A 14194025-AC-A **
16305908-G-GT 14194028-G-GT **
16316700-A-T 14204820-A-T **
16384409-C-T 14272529-C-T **
16405492-T-C 14293612-T-C **
16421112-T-G 14309232-T-G **
16598978-T-G 14487098-T-G **
17403836-C-A 15291956-C-A **
16605124-C-T 14493244-C-T **
16709897-T-A 14598017-T-A **
16750031-T-A 14638151-T-A **
16783609-C-T 14671729-C-T **
16888200-T-C 14776320-T-C **
17089013-G-A 14977133-G-A **
17095439-G-T 14983559-G-T **
17164811-A-G 15052931-A-G **
17196398-C-A 15084518-C-A **
17385345-A-G 15273465-A-G **
5648711-T-C 5780670-T-C **
35473-C-G **
5627879-T-G 5759838-T-G **
10876207-A-T **
13501973-C-A 11346297-C-A **
16720832-G-T 14608952-G-T **
18511544-T-A 16399664-T-A P6_Dst **
22703588-T-C 20541702-T-C **
9936464-G-T 10098855-G-T **
9732792-G-T 9895183-G-T IR3_Prx **
11648180-C-A **
17402284-C-A 15290404-C-A **
22188870-C-A 20026984-C-A **
21269328-G-GA 19107442-G-GA 9×A**
16117491-T-C 14005611-T-C P8_Prx **
8077177-C-A 8209136-C-A **
11650651-G-T **
27540970-A-C 25394823-A-C P1_Y2 **
28519645-C-A 26373498-C-A **
20073846-C-T 17961966-C-T P5_Dst **
20073848-C-CAT 17961968-C-CAT P5_Dst **
8314192-G-C 8446151-G-C **
5199621-A-C 5331580-A-C **
9307447-T-G 9469838-T-G **
17385382-T-C 15273502-T-C **
11036222-T-C **
10879995-G-T **
10924324-T-TTCCAC **
15034972-C-A 12923060-C-A **
56850451-T-C **
10789779-C-G **
22765480-C-A 20603594-C-A **
10939754-C-A **
25246431-T-C 23100284-T-C P2_r1 **
10962561-A-C **
16305915-A-G 14194035-A-G **
10846890-T-C **
14297308-C-A 12176602-C-A **
10950214-A-C **
8705698-C-CTT 8837657-C-CTT 16×T**
3275545-G-T 3407504-G-T **
56851064-G-T **
22650960-C-A 20489074-C-A **
10836486-C-T **
5627869-T-A 5759828-T-A **
4840649-C-A 4972608-C-A **
21241984-C-A 19080098-C-A **
21694923-C-A 19533037-C-A **
10895647-T-A **
17137114-C-A 15025234-C-A **
27540972-CAA-C 25394825-CAA-C P1_Y2 **
13883047-C-A 11762341-C-A **
10837082-C-A **
10836491-C-T **
10883869-T-C **
10911379-C-A **
18959215-A-C 16847335-A-C **
16576-T-G **
15394306-C-A 13282426-C-A **
15632014-C-A 13520134-C-A **
22335156-A-G 20173270-A-G DYZ19 **
6862019-C-A 6993978-C-A **
10666708-G-A **
22335160-C-T 20173274-C-T BY217520 DYZ19 **
10846809-G-T **
18687662-TAATA-T 16575782-TAATA-T 5×AATA**
15608048-T-C 13496168-T-C **
11670842-T-G **
15608057-T-A 13496177-T-A **
18511556-T-A 16399676-T-A P6_Dst **
4103258-C-A 4235217-C-A **
6977572-C-A 7109531-C-A **
16351597-C-A 14239717-C-A **
10683474-C-A **
7332905-C-A 7464864-C-A **
20332010-T-A 18170124-T-A P5_Dst **
14359768-C-A 12239063-C-A **
6090484-G-GA 6222443-G-GA 10×A**
3626787-G-T 3758746-G-T **
7135103-C-A 7267062-C-A **
6917059-C-A 7049018-C-A **
6357935-G-T 6489894-G-T **
18856267-A-C 16744387-A-C **
17713888-C-T 15602008-C-T **
7643040-C-A 7774999-C-A **
17848887-T-C 15737007-T-C **
28815231-A-G 26669084-A-G **
5409823-C-A 5541782-C-A **
17842263-C-A 15730383-C-A **
6226075-C-T 6358034-C-T IR3_Dst **
18738141-G-T 16626261-G-T **
10845765-C-G **
14159529-C-CT 12038823-C-CT 10×T**
17667074-C-A 15555194-C-A **
15375981-T-C 13264101-T-C **
7097406-G-T 7229365-G-T **
22520781-T-C 20358895-T-C **
8314175-C-G 8446134-C-G **
19938632-A-T 17826752-A-T P5_Prx **
10950172-A-C **
21146375-C-A 18984489-C-A **
27991627-G-GAT 25845480-G-GAT P1_Y2 **
10756401-T-C **
5904896-C-A 6036855-C-A **
10796585-T-C **
19520825-G-A 17408945-G-A **
13499191-CT-C 11343515-CT-C 10×T**
23098806-G-A 20936920-G-A **
10841897-A-T **
24513601-C-A 22367454-C-A **
10756396-T-A **
9932078-GT-G 10094469-GT-G 10×T**
8314181-C-T 8446140-C-T **
56850916-A-G **
7541277-G-T 7673236-G-T **
10836496-C-T **
17362789-C-A 15250909-C-A **
28656929-C-A 26510782-C-A **
10877810-T-A **
17597689-C-A 15485809-C-A **
10766791-G-T **
14364093-G-T 12243388-G-T **
15189655-T-G 13077741-T-G **
9956378-AAAG-A 10118769-AAAG-A 8×AAG**
10766505-T-C **
23435722-G-T 21273836-G-T **
15608020-T-C 13496140-T-C **
15608021-G-C 13496141-G-C **
20420949-G-T 18259063-G-T P5_Dst **
28644358-C-A 26498211-C-A **
9591035-A-AG 9753426-A-AG IR3_Prx **
28653802-C-T 26507655-C-T **
10824720-C-A **
18511565-C-T 16399685-C-T P6_Dst 20×AT**
24407353-A-C 22261206-A-C **
13223404-G-GAGCA 11067728-G-GAGCA **
2688789-AT-A 2820748-AT-A 8×T**
6090504-A-C 6222463-A-C **
10018024-C-A 10180415-C-A **
14384502-C-T 12263798-C-T **
14717612-G-T 12605680-G-T **
4770484-A-G 4902443-A-G **
10763772-A-G **
19528305-C-A 17416425-C-A **
8970825-G-T 9133216-G-T **
13974046-C-A 11853340-C-A **
5447005-C-A 5578964-C-A **
6663262-C-A 6795221-C-A FGC34784 **
10692817-A-C **
10924336-C-A **
20255095-A-AC 18093209-A-AC P5_Dst **
19482239-C-A 17370359-C-A **
11014171-G-A **
28730074-C-A 26583927-C-A **
11036177-A-T **
4062630-C-A 4194589-C-A **
21515849-C-A 19353963-C-A **
15374440-A-G 13262560-A-G **
11671010-C-A **
56848711-A-T **
56848716-T-C **
11670826-T-A **
19622064-G-A 17510184-G-A P5_Prx **
8269647-C-A 8401606-C-A **
18687528-A-T 16575648-A-T **
18959211-TC-T 16847331-TC-T **
8030027-CATTA-C 8161986-CATTA-C **
13200457-C-T 11044781-C-T **
14041528-C-A 11920822-C-A **
7784528-T-C 7916487-T-C **
19597189-T-TTTA 17485309-T-TTTA P5_Prx **
27585940-A-T 25439793-A-T P1_Y2 **
14054065-C-A 11933359-C-A **
4215329-G-T 4347288-G-T **
11006463-C-A **
2774862-C-G 2906821-C-G **
10846598-C-A **
8124908-C-A 8256867-C-A **
10940803-C-A **
21164659-C-A 19002773-C-A **
21551672-C-T 19389786-C-T M6006 **
22486220-A-T 20324334-A-T DYZ19 **
2774859-T-C 2906818-T-C **
2775225-C-A 2907184-C-A **
4840666-C-A 4972625-C-A **
2784334-A-C 2916293-A-C **
2813709-C-T 2945668-C-T **
2814861-G-A 2946820-G-A **
2852636-C-A 2984595-C-A **
2894629-G-T 3026588-G-T **
2974316-C-A 3106275-C-A **
3105635-A-T 3237594-A-T **
3105655-G-T 3237614-G-T **
14717586-G-T 12605654-G-T **
4351494-T-G 4483453-T-G **
3208745-G-T 3340704-G-T **
22488997-C-T 20327111-C-T Z20186 DYZ19 **
11670843-A-C **
10917965-A-C **
24070739-G-C 21924592-G-C P3_b1 **
14089799-C-A 11969093-C-A **
20326050-C-T 18164164-C-T P5_Dst **
4447560-C-A 4579519-C-A **
18190156-C-A 16078276-C-A **
11670768-C-G **
10846578-C-A **
11670777-T-G **
11670812-A-G **
16220680-C-A 14108800-C-A **
7152761-C-A 7284720-C-A **
17969063-C-A 15857183-C-A **
5212674-C-A 5344633-C-A **
28515227-C-A 26369080-C-A **
22327794-G-T 20165908-G-T DYZ19 **
3109103-G-T 3241062-G-T **
3365138-T-C 3497097-T-C **
10758831-C-A **
9304430-T-G 9466821-T-G **
4446084-G-A 4578043-G-A **
4465151-A-G 4597110-A-G **
4526479-T-TA 4658438-T-TA 8×A**
4537878-C-A 4669837-C-A **
4557520-G-A 4689479-G-A **
4654496-G-T 4786455-G-T **
4773892-G-T 4905851-G-T **
4932099-T-A 5064058-T-A **
4298392-C-A 4430351-C-A FT11858 **
5022657-A-G 5154616-A-G **
5046744-G-T 5178703-G-T **
5047031-G-A 5178990-G-A **
5127654-C-A 5259613-C-A **
5199493-C-A 5331452-C-A **
5264467-C-G 5396426-C-G **
5420662-A-G 5552621-A-G **
5603900-A-G 5735859-A-G **
4365927-G-T 4497886-G-T **
4149354-C-T 4281313-C-T **
3595140-C-A 3727099-C-A **
3839899-T-A 3971858-T-A **
3644773-G-T 3776732-G-T **
3678154-A-G 3810113-A-G **
3706774-C-T 3838733-C-T **
3716853-A-C 3848812-A-C **
3804464-A-G 3936423-A-G **
3828478-G-T 3960437-G-T **
3837743-C-A 3969702-C-A 9×A**
3852297-T-G 3984256-T-G **
4142368-C-A 4274327-C-A **
3883942-T-A 4015901-T-A **
3898143-C-G 4030102-C-G FGC24945 **
3898246-C-A 4030205-C-A **
3943419-C-CTT 4075378-C-CTT 10×T**
4065346-A-G 4197305-A-G **
4067077-C-A 4199036-C-A **
4070083-C-A 4202042-C-A **
4142255-C-T 4274214-C-T **
10041793-C-A 10204184-C-A **
7784531-T-C 7916490-T-C **
23205005-C-A 21043119-C-A **
17446836-A-T 15334956-A-T **
20025733-A-AC 17913853-A-AC P5_Prx **
13586083-C-A 11430407-C-A **
4969228-C-A 5101187-C-A **
15182962-C-A 13071048-C-A **
3659148-G-T 3791107-G-T **
13225798-A-G 11070122-A-G **
22077340-C-A 19915454-C-A **
14825857-G-A 12713924-G-A **
9437234-C-A 9599625-C-A **
23034378-C-A 20872492-C-A **
23808025-C-A 21646139-C-A **
10953374-C-T **
21574006-C-A 19412120-C-A Y106951 **
7338500-G-T 7470459-G-T **
22490517-C-A 20328631-C-A DYZ19 **
10779397-C-A **
17157536-C-A 15045656-C-A **
6580105-C-A 6712064-C-A **
4889439-C-A 5021398-C-A **
11014190-G-C **
7224215-T-A 7356174-T-A **
10654616-T-C **
2888803-G-T 3020762-G-T **
16270392-C-A 14158512-C-A **
18511560-C-A 16399680-C-A P6_Dst **
13976508-C-A 11855802-C-A **
21476451-C-A 19314565-C-A **
10015949-C-A 10178340-C-A **
6642842-C-A 6774801-C-A **
9109303-G-T **
9666471-G-A 9828862-G-A IR3_Prx **
13705480-G-C 11549804-G-C **
15410878-C-A 13298998-C-A **
22301184-G-A 20139298-G-A DYZ19 *****
10685476-A-C **
10852249-G-C **
11016057-C-T **
14825865-A-T 12713932-A-T **
19183870-A-C 17071990-A-C **
16708331-A-G 14596451-A-G **
7314538-C-A 7446497-C-A **
10877772-C-G **
13553114-C-A 11397438-C-A **
10856599-C-A **
18794938-C-A 16683058-C-A **
20326056-A-C 18164170-A-C P5_Dst **
5814507-CT-C 5946466-CT-C **
5212082-C-A 5344041-C-A **
10927722-T-A **
10841869-T-G **
10852238-T-C **
10852241-T-C **
10852246-T-C **
10852258-T-G **
10852264-C-T **
17848836-T-C 15736956-T-C Y27361 **
18778873-C-A 16666993-C-A **
22833858-C-A 20671972-C-A A17675 **
4471657-C-T 4603616-C-T **
11027138-G-C **
13225813-A-G 11070137-A-G **
13225815-A-G 11070139-A-G **
4058550-GATAT-G 4190509-GATAT-G 9×AT**
10881904-A-C **
23127440-T-C 20965554-T-C ***
13820739-G-A 11700033-G-A BY90535 ***
21623838-G-GT 19461952-G-GT ***
25221842-G-A 23075695-G-A P2_r1 ***
23498316-CT-C 21336430-CT-C 10×T***
13430128-A-G 11274452-A-G ***
13430122-G-A 11274446-G-A ***
28797805-G-GTGGAC 26651658-G-GTGGAC ***
9013250-T-C 9175641-T-C ***
9962542-A-G 10124933-A-G ***
10884839-TTCCATTCC-T,TTCCGTTCC ***
22304166-A-G 20142280-A-G DYZ19 ******
13469116-T-A 11313440-T-A ***
24184301-A-G 22038154-A-G P3_b1 ***
22658330-T-C 20496444-T-C ***
21748259-G-T 19586373-G-T ***
56835402-AGTACATTCCACTCCACTCCACTCCT-AGTACGTTCCCCTCCACTCCACTCCA,T ***
27216729-C-A 25070582-C-A P1_g3 ***
22453279-T-C 20291393-T-C DYZ19 ***
5937242-C-CTATA 6069201-C-CTATA 18×TA***
23441187-T-A 21279301-T-A ***
13451185-CTCCT-CTC,T 11295509-CTCCT-CTC,T ***
9944883-T-G 10107274-T-G ***
6989133-T-C 7121092-T-C ***
10809070-C-A ***
10023017-G-T 10185408-G-T ***
13672417-C-T 11516741-C-T Y134852 ***
22461815-T-C 20299929-T-C BY25073 DYZ19 ***
19436726-AAGAAAGAAAGAA-A,AAGAG 17324846-AAGAAAGAAAGAA-A,AAGAG ***
15279220-G-T 13167319-G-T 9×T***
23128865-G-T 20966979-G-T ***
15057757-G-T 12945849-G-T ***
10971046-T-A ***
13860748-T-A,C 11740042-T-A,C ***
22260626-G-A 20098740-G-A DYZ19 ***
10673939-ATTGC-A,ATT ***
13837945-A-T 11717239-A-T ***
56851559-C-A ***
16308510-TTG-T 14196630-TTG-T ***
21323469-A-T 19161583-A-T ***
10975455-G-T ***
2860458-GTT-G,GTTT 2992417-GTT-G,GTTT 18×T***
11020209-C-A ***
10939608-A-C ***
10894253-T-C ***
10943031-G-T ***
10949838-C-T ***
17367870-C-A 15255990-C-A ***
10986677-N-ATTACA,ATTCCA ***
10893522-G-T ***
11020093-TACCTC-CTCCTC,T ***
9798086-C-A 9960477-C-A ***
11032304-C-A ***
16904709-A-C 14792829-A-C ***
11038121-A-C ***
10883910-T-G ***
10883894-TC-T ***
10883862-C-A ***
56827246-C-T ***
15532890-C-A 13421010-C-A ***
6786715-C-A 6918674-C-A ***
16603896-C-A 14492016-C-A ***
22498488-T-G 20336602-T-G FGC39338 DYZ19 ***
7400195-A-C 7532154-A-C ***
8556313-GTT-G,GTTT 8688272-GTT-G,GTTT 17×T***
8704065-G-A 8836024-G-A ***
9822897-CTAAA-C 9985288-CTAAA-C 5×TAAA***
2762480-C-A 2894439-C-A ***
2702360-G-A 2834319-G-A ***
9965532-A-G 10127923-A-G ***
10781845-A-T ***
10685707-C-T ***
10687410-C-A ***
10744481-T-C,CAC ***
10939622-C-T ***
16913177-C-A 14801297-C-A ***
10765397-G-T ***
18993187-C-A 16881307-C-A ***
10975435-C-A ***
11644573-G-T ***
11654642-T-A ***
56850427-T-A ***
14180751-C-A 12060045-C-A ***
3990663-T-C 4122622-T-C ***
16931695-C-G 14819815-C-G ***
17572171-C-A 15460291-C-A ***
23953112-G-T 21806965-G-T ***
10821869-TTCCAC-T ***
14746168-C-A 12634237-C-A ***
17170186-TTTG-G,TTTT 15058306-TTTG-G,TTTT ***
10837274-C-A ***
10751009-T-TATTCC ***
15859437-CTTTTT-C,CT 13747557-CTTTTT-C,CT 17×T***
10778024-C-A ***
19071709-C-T 16959829-C-T ***
19464084-T-C 17352204-T-C ***
19529701-A-G 17417821-A-G ***
10757927-T-C ***
10988820-C-T ***
10988818-T-G ***
10965551-CTCCATTCCAT-C ***
16427971-G-T 14316091-G-T ***
11668302-T-C ***
4995890-C-A 5127849-C-A ***
17503539-G-A 15391659-G-A ***
9843172-T-A 10005563-T-A ***
4701249-G-T 4833208-G-T ***
2693227-C-A 2825186-C-A ***
14352944-A-G 12232239-A-G ***
10843974-G-T ***
21323308-C-A 19161422-C-A ***
10773569-C-A ***
16345206-C-A 14233326-C-A ***
15183665-A-G 13071751-A-G ***
15372137-T-C 13260257-T-C ***
10939634-T-C ***
14245211-A-G 12124505-A-G 13×GAAG***
9908175-A-G 10070566-A-G ***
15581093-CTTT-C,CTT 13469213-CTTT-C,CTT 16×T***
16003158-T-A 13891278-T-A ***
10751673-C-A ***
20629009-CTCCT-C 18467123-CTCCT-C P4_Prx 17×TCCT***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 1897651064097577224667809550
Kit: 189765977702578811107756281
Used in age calculations1064097578811107809550
Counts of SNPs66
Variant counts last updated 2019-05-04 11:23:58.



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