O'Hanlon

FTDNA: 300242, BigY2: 300242

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > FGC11134 > FGC12055 > A353 > Z3026 > Z16250 > A114 > CTS4466/S1136 > S1115 > Z3023 > FGC84010 > A541 > S1121 > Z16251 > A159 > Z17981 > Z3006

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
300242		BigY2
300242
28790490-G-T 26644343-G-T A*
13694954-C-T 11539278-C-T DYZ17 A*
13451827-C-A 11296151-C-A A*
8126343-T-C 8258302-T-C YY++
22833697-C-T 20671811-C-T CTS10916 YY+
8168832-G-A 8300791-G-A BY20126FGC66784 BY20126 YY++
15589371-C-A 13477491-C-A YY++
16365124-G-T 14253244-G-T BY107248 YY++
16411626-C-T 14299746-C-T YY++
17533174-A-G 15421294-A-G YY++
18669363-C-G 16557483-C-G YY++
18884324-C-T 16772444-C-T Y55006 YY++
18921738-G-T 16809858-G-T YY++
19402443-T-C 17290563-T-C BY128799 YY++
22298304-A-C 20136418-A-C BY216661 DYZ19 ***+
23873751-G-C 21711865-G-C Y++
28660276-C-T 26514129-C-T **+
23552895-C-CA 21391009-C-CA 11×A****
18804948-T-TAC 16693068-T-TAC 12×AC****
3152180-A-G 3284139-A-G BY41572 **
16172191-C-G 14060311-C-G CTS5264 FGC2043 ****
13322814-G-A 11167138-G-A **
13722731-A-T 11567055-A-T DYZ17 **
19202765-C-A 17090885-C-A 17×A**
13962138-A-T 11841432-A-T **
27952093-A-G 25805946-A-G P1_Y2 **
15658086-GTA-G 13546206-GTA-G **
21554490-TG-T 19392604-TG-T **
23109543-T-C 20947657-T-C CTS11430 M5558 PF1891 **
58995859-A-G 56849712-A-G **
26098021-A-G 23951874-A-G P1_Y1 **
15143645-G-C 13031732-G-C Z356 **
15658069-C-T 13546189-C-T FT301208 **
21863870-C-A 19701984-C-A **
20280146-TC-T 18118260-TC-T P5_Dst **
9221731-C-A 9384122-C-A Y8279 **
20440388-C-A 18278502-C-A P5_Dst **
2683262-T-C 2815221-T-C **
4063900-C-A 4195859-C-A **
9979215-C-A 10141606-C-A **
22300851-T-A 20138965-T-A DYZ19 **
15622701-A-G 13510821-A-G **
13709299-T-A 11553623-T-A DYZ17 *****
13709673-T-C 11553997-T-C DYZ17 *****
13709674-G-T 11553998-G-T DYZ17 *****
22803994-A-T 20642108-A-T 10×T**
16227993-A-G 14116113-A-G **
19436785-A-T 17324905-A-T **
58834005-T-A 56756866-A-T **
10895835-C-CTATTG **
10895839-T-TCA **
10895841-CAT-C **
10895857-A-G **
10945385-A-C **
14549309-C-A 12437510-C-A 16×A**
9702932-G-A 9865323-G-A IR3_Prx **
17584182-A-C 15472302-A-C **
19054342-CTTTT-C 16942462-CTTTT-C 16×T**
10940322-A-C **
10940327-C-T **
10672699-C-A **
15364049-G-A 13252169-G-A **
10926695-T-TCCGA **
15604346-C-A 13492466-C-A **
17946945-A-T 15835065-A-T **
27872569-C-G 25726422-C-G P1_Y2 **
10814829-G-C **
7135218-C-A 7267177-C-A **
10760737-G-C **
18346573-C-A 16234693-C-A P6_Prx **
10814844-C-A **
15065984-T-G 12954076-T-G **
3991898-C-A 4123857-C-A **
10842254-A-C **
28633537-C-A 26487390-C-A **
56841071-C-A **
15882073-T-A 13770193-T-A **
21152512-CTT-C 18990626-CTT-C 14×T**
11030160-A-ATTCCAT **
8109853-G-A 8241812-G-A **
8109860-T-C 8241819-T-C **
8109866-T-C 8241825-T-C **
13922452-C-A 11801746-C-A **
10976949-A-G FT230078 **
6038786-G-T 6170745-G-T **
11024579-A-T **
11024593-T-A **
11024609-A-T FT213946 **
11024637-C-G **
7217193-G-T 7349152-G-T **
8776573-A-G 8908532-A-G **
23825103-A-C 21663217-A-C **
15049314-TTTTG-T 12937405-TTTTG-T 4×TTTG**
10782668-A-C **
25524730-A-C 23378583-A-C P1_gr1 **
22268524-A-G 20106638-A-G DYZ19 **
7174339-C-A 7306298-C-A **
10802634-C-T **
10802636-T-A **
10802640-C-A **
13486675-T-A 11330999-T-A **
10806361-T-A **
10806375-T-A **
11673446-C-A DYZ17 **
10998937-C-A **
28542477-C-A 26396330-C-A **
4929378-C-A 5061337-C-A **
16528284-G-GA 14416404-G-GA 9×A**
10782669-T-A **
16305781-C-T 14193901-C-T **
10946617-T-A **
18738140-A-T 16626260-A-T **
10832452-T-A **
2842994-C-A 2974953-C-A **
10659256-G-T **
15324966-C-A 13213084-C-A **
10760729-A-C **
10760739-A-G **
10945376-G-C **
3834976-C-A 3966935-C-A **
7186804-AT-A 7318763-AT-A 9×T**
15866241-C-A 13754361-C-A **
6147436-G-T 6279395-G-T IR3_Dst **
18480346-G-A 16368466-G-A P6_Dst **
10946636-C-T **
7860163-C-A 7992122-C-A **
5645026-C-A 5776985-C-A **
13880766-C-A 11760060-C-A **
2683252-T-C 2815211-T-C **
22615442-C-A 20453556-C-A **
10956134-C-A **
19979174-A-C 17867294-A-C P5_Prx **
17707356-G-A 15595476-G-A **
10814841-T-C **
10814884-C-A **
24614210-G-A 22468063-G-A P3_t2 **
16305769-CA-C 14193889-CA-C **
16305805-G-A 14193925-G-A **
10785362-G-C **
23825294-A-C 21663408-A-C **
25524734-A-C 23378587-A-C P1_gr1 **
10962730-T-C **
10962747-T-C **
15606917-C-A 13495037-C-A **
19523575-C-A 17411695-C-A **
15733854-T-G 13621974-T-G **
16516405-C-A 14404525-C-A **
6765634-T-G 6897593-T-G **
14361957-C-A 12241252-C-A **
11016723-G-C **
19677913-C-CA 17566033-C-CA P5_Prx **
10776469-T-C **
10946631-C-T **
18756160-C-A 16644280-C-A **
19059385-C-A 16947505-C-A **
21147926-C-A 18986040-C-A FT274913 **
13856230-C-A 11735524-C-A DYZ17 **
10814855-T-A **
56850956-G-T **
23460486-G-T 21298600-G-T **
15739806-C-A 13627926-C-A **
24636393-C-T 22490246-C-T FT460981 P3_t2 **
19145421-C-A 17033541-C-A **
23825105-T-C 21663219-T-C **
24296350-A-AC 22150203-A-AC P3_t1 **
23832962-T-A 21671076-T-A **
16227989-A-G 14116109-A-G **
17158616-C-A 15046736-C-A **
23342074-G-T 21180188-G-T **
11011462-A-ACATTC **
10832406-A-T **
10832410-C-T **
10832437-A-T **
10832442-A-C **
10832449-T-A **
10832450-C-T **
15477288-T-A 13365408-T-A **
10828102-G-T **
10961390-C-G **
14871365-C-A 12759435-C-A **
5586119-C-A 5718078-C-A **
5059685-A-G 5191644-A-G **
10926718-C-T **
6944942-T-G 7076901-T-G **
17505662-C-A 15393782-C-A **
10961428-C-T **
26260636-A-ATT 24114489-A-ATT P1_Y1 11×T**
23264111-C-A 21102225-C-A **
13215557-C-A 11059881-C-A **
10814792-C-T **
14313706-C-A 12193000-C-A **
10976944-G-A FT438872 **
22092988-C-A 19931102-C-A **
19532456-C-A 17420576-C-A **
20326037-GCA-G 18164151-GCA-G P5_Dst **
10948411-C-A **
24416978-C-A 22270831-C-A **
10690782-G-T **
13471973-G-T 11316297-G-T **
17942164-C-A 15830284-C-A **
23291372-C-A 21129486-C-A **
18847735-C-A 16735855-C-A **
19256354-C-A 17144474-C-A **
16601481-G-A 14489601-G-A **
24673313-G-T 22527166-G-T P3_b2 **
17813536-C-A 15701656-C-A **
10990873-G-T **
15161291-T-A 13049377-T-A **
10936014-C-A **
14555000-C-A 12443201-C-A **
13885977-A-T 11765271-A-T **
10851802-G-C **
22529534-G-A 20367648-G-A **
28062611-A-C 25916464-A-C P1_Y2 **
16036280-G-T 13924400-G-T **
13643495-C-A 11487819-C-A **
10851733-T-C **
15866233-T-A 13754353-T-A **
20635502-A-G 18473616-A-G P4_Prx **
3012159-G-T 3144118-G-T **
17714705-C-A 15602825-C-A **
56858137-A-G **
23104371-T-C 20942485-T-C **
15358692-T-A 13246811-T-A **
28701801-C-A 26555654-C-A **
13316100-C-A 11160424-C-A **
4878246-C-A 5010205-C-A 18×A**
5022254-T-A 5154213-T-A **
6948136-A-T 7080095-A-T **
10010613-G-T 10173004-G-T **
16601473-C-T 14489593-C-T **
10934721-C-T **
18346517-G-A 16234637-G-A P6_Prx **
8127997-C-A 8259956-C-A **
7176972-C-A 7308931-C-A **
28755738-C-A 26609591-C-A **
16485795-C-A 14373915-C-A **
4918974-G-T 5050933-G-T **
56858157-A-AATAC **
15452585-C-A 13340705-C-A **
11019148-C-A **
22936314-G-T 20774428-G-T **
13468207-C-G 11312531-C-G **
17944900-C-A 15833020-C-A **
15109918-C-A 12998005-C-A **
6010342-C-A 6142301-C-A **
7103359-C-A 7235318-C-A **
14826539-G-T 12714606-G-T **
14398307-A-G 12277603-A-G **
15612293-C-A 13500413-C-A **
10814801-C-T **
23304489-C-A 21142603-C-A **
23954011-C-A 21807864-C-A **
7099925-C-A 7231884-C-A **
14815268-C-A 12703339-C-A **
28505594-C-A 26359447-C-A **
22936324-C-T 20774438-C-T **
13608634-C-A 11452958-C-A **
21953182-C-A 19791296-C-A **
10657565-C-A **
11003518-C-A **
21836184-C-A 19674298-C-A **
4875331-G-T 5007290-G-T **
10934716-C-T **
14079716-C-A 11959010-C-A **
28650640-C-A 26504493-C-A **
16305815-C-T 14193935-C-T **
10850525-C-A **
10678546-C-A **
21766754-A-AC **
24407117-T-C 22260970-T-C **
16305840-G-A 14193960-G-A **
22541091-C-A 20379205-C-A **
5817959-G-T 5949918-G-T **
14992398-C-A 12880483-C-A **
16676596-C-A 14564716-C-A **
13902914-G-A 11782208-G-A **
18636641-G-T 16524761-G-T YFS287772 **
14588928-G-T 12477128-G-T **
19398174-C-A 17286294-C-A **
5189670-C-A 5321629-C-A **
19563337-C-A 17451457-C-A **
21136854-T-C 18974968-T-C **
15728787-G-A 13616907-G-A **
17713968-C-A 15602088-C-A **
8575984-TGC-T 8707943-TGC-T **
10945358-A-T **
21974676-T-C 19812790-T-C **
9310592-ACC-A 9472983-ACC-A **
9310601-C-T 9472992-C-T **
10835436-C-A **
17346433-C-A 15234553-C-A **
11018230-T-C **
23954197-C-A 21808050-C-A **
14050775-C-A 11930069-C-A **
7329277-C-A 7461236-C-A **
11653281-C-A DYZ17 **
18723957-C-T 16612077-C-T **
14953535-G-A 12841609-G-A **
16085757-C-A 13973877-C-A **
11656647-C-A DYZ17 **
21752694-G-T **
7324743-C-A 7456702-C-A **
10929581-C-A **
16707453-G-T 14595573-G-T **
17353170-C-A 15241290-C-A **
19873758-C-A 17761878-C-A P5_Prx **
14551560-C-A 12439761-C-A **
11002195-C-A **
28650012-C-A 26503865-C-A **
10974923-A-C **
28567501-C-A 26421354-C-A **
9426681-C-A 9589072-C-A **
14264411-C-A 12143705-C-A **
2683263-G-A 2815222-G-A **
2708012-A-T 2839971-A-T **
2860090-C-A 2992049-C-A **
2885871-C-A 3017830-C-A **
2959899-G-A 3091858-G-A **
2959900-G-A 3091859-G-A **
2965392-G-T 3097351-G-T **
3006823-G-T 3138782-G-T **
3089653-G-T 3221612-G-T **
3103568-A-G 3235527-A-G **
3109077-T-C 3241036-T-C **
3109094-G-C 3241053-G-C **
3285004-A-C 3416963-A-C **
3380102-C-A 3512061-C-A **
3500581-A-G 3632540-A-G FT80364 **
3506889-A-G 3638848-A-G **
3668553-G-T 3800512-G-T **
3716189-C-A 3848148-C-A **
3716220-C-T 3848179-C-T **
3749663-T-C 3881622-T-C **
3821009-C-A 3952968-C-A **
3872539-G-T 4004498-G-T **
3987721-C-A 4119680-C-A **
4036059-G-A 4168018-G-A **
4080512-C-T 4212471-C-T **
4094214-G-T 4226173-G-T **
4138475-C-T 4270434-C-T **
4221222-C-T 4353181-C-T **
4244670-A-G 4376629-A-G **
4449921-C-A 4581880-C-A **
4549916-C-A 4681875-C-A **
4766204-C-A 4898163-C-A **
4781144-G-C 4913103-G-C **
4902605-C-A 5034564-C-A **
4920869-T-C 5052828-T-C **
5022026-G-T 5153985-G-T **
5022337-G-C 5154296-G-C **
5040679-A-C 5172638-A-C **
5204590-T-A 5336549-T-A **
5207663-C-A 5339622-C-A **
5246784-A-T 5378743-A-T **
5339687-A-T 5471646-A-T **
5448790-AT-A 5580749-AT-A **
5534042-C-A 5666001-C-A **
5597445-G-A 5729404-G-A **
5755251-C-T 5887210-C-T **
5791302-C-A 5923261-C-A **
5809156-A-G 5941115-A-G **
5814223-C-A 5946182-C-A **
5924317-T-C 6056276-T-C **
5942896-C-T 6074855-C-T **
5960729-G-T 6092688-G-T **
6085921-G-A 6217880-G-A **
6144668-G-T 6276627-G-T IR3_Dst **
6147467-AG-A 6279426-AG-A IR3_Dst **
6350754-C-A 6482713-C-A **
6367558-T-C 6499517-T-C **
6492691-A-G 6624650-A-G **
6666290-C-A 6798249-C-A **
6698969-C-T 6830928-C-T **
6700876-G-A 6832835-G-A **
6720229-T-G 6852188-T-G **
6720251-G-C 6852210-G-C **
6776340-C-A 6908299-C-A FT253296 **
6808742-C-A 6940701-C-A **
6858687-C-T 6990646-C-T **
6882035-C-A 7013994-C-A **
6922414-A-G 7054373-A-G **
6954811-G-T 7086770-G-T **
6976654-G-T 7108613-G-T **
7045543-A-G 7177502-A-G **
7075899-C-A 7207858-C-A **
7108471-C-A 7240430-C-A **
7177067-G-A 7309026-G-A **
7240183-C-A 7372142-C-A **
7240222-G-A 7372181-G-A **
7243779-A-G 7375738-A-G **
7247982-C-A 7379941-C-A **
7255455-C-T 7387414-C-T **
7269394-T-A 7401353-T-A **
7303817-G-T 7435776-G-T **
7314596-T-G 7446555-T-G **
7430428-C-A 7562387-C-A **
7453533-T-G 7585492-T-G IR1_L **
7462629-G-T 7594588-G-T IR1_L **
7463905-G-A 7595864-G-A IR1_L **
7572782-C-A 7704741-C-A **
7640788-T-G 7772747-T-G **
7780741-T-A 7912700-T-A 11×A**
7853128-C-T 7985087-C-T **
7970401-T-C 8102360-T-C **
7990189-C-A 8122148-C-A **
7990194-A-C 8122153-A-C **
8090988-A-T 8222947-A-T **
8109861-G-T 8241820-G-T **
8213588-T-C 8345547-T-C **
8290733-TTTTTAATA-T 8422692-TTTTTAATA-T **
8575983-T-G 8707942-T-G **
8702863-A-T 8834822-A-T **
8751332-C-A 8883291-C-A **
8807150-C-A 8939109-C-A **
8848425-C-T 8980384-C-T **
8911995-G-T 9043954-G-T **
8976411-C-A 9138802-C-A **
9030193-A-C 9192584-A-C **
9055402-G-T 9217793-G-T **
9075279-T-A 9237670-T-A **
9417002-G-T 9579393-G-T **
9456682-A-T 9619073-A-T **
9654623-T-G 9817014-T-G IR3_Prx **
9830631-G-T 9993022-G-T **
9899451-A-C 10061842-A-C **
9937818-G-A 10100209-G-A **
10005951-T-G 10168342-T-G **
10015062-G-C 10177453-G-C **
10074659-T-C 10237050-T-C **
10659228-T-G **
10660995-TC-T **
10663579-C-A **
10678572-C-A **
10687892-C-A **
10751105-A-C **
10760500-G-T **
10789703-A-T **
10791657-C-A **
10792941-A-C **
10795434-C-A **
10798035-C-A **
10802662-C-A **
10806344-C-T **
10806350-C-T **
10806351-A-T **
10806379-C-T **
10806799-TC-T **
10814817-T-C **
10814818-C-A **
10814819-C-G **
10814826-C-T FT432393 **
10814858-CAATTT-C **
10814873-CCACTT-C **
10814894-C-A **
10815396-C-A **
10817675-A-C **
10832490-A-C **
10840156-A-T **
10842215-G-T **
10843847-CA-C **
10845082-G-T **
10846146-C-A **
10848192-C-A **
10868860-CTCCAT-C **
10873109-A-G **
10874290-G-T **
10886895-C-A **
10934737-TTTCTA-T **
10936005-A-C **
10938296-C-A **
10945132-A-C **
10945364-T-A **
10945377-A-T **
10945378-T-C **
10945386-C-T **
10946633-C-G **
10955269-T-C **
10955454-T-G **
10956071-A-G **
10961424-T-G **
10964709-A-T **
10977785-C-A **
10977838-C-A **
10979773-G-C **
10979776-A-C **
10979783-G-C **
10979795-T-C **
10979800-T-C **
10987371-C-A **
11001626-T-G **
11021574-C-A **
11022771-A-C FT393989 **
11027515-C-A **
11031629-T-A **
11031647-G-A **
11034310-A-C **
13205329-T-G 11049653-T-G **
13256044-G-T 11100368-G-T 12×T**
13291864-T-A 11136188-T-A **
13307212-C-A 11151536-C-A **
13308200-C-A 11152524-C-A **
13326297-T-G 11170621-T-G **
13326300-C-G 11170624-C-G **
13327791-C-A 11172115-C-A **
13330427-T-G 11174751-T-G **
13349848-GA-C 11194172-GA-C **
13572405-T-A 11416729-T-A **
13577938-G-C 11422262-G-C **
13586133-G-T 11430457-G-T **
13594501-A-C 11438825-A-C **
13596443-G-T 11440767-G-T **
13608633-G-C 11452957-G-C **
13690266-A-G 11534590-A-G DYZ17 **
11648508-A-G DYZ17 **
11653274-A-C DYZ17 **
11653296-C-T DYZ17 **
11660304-C-A DYZ17 **
11669574-G-T DYZ17 **
11673301-G-T DYZ17 **
11674975-T-C DYZ17 **
13828288-A-T 11707582-A-T DYZ17 **
13919333-G-T 11798627-G-T **
13964996-C-A 11844290-C-A **
13966798-G-A 11846092-G-A FTB3018 **
14017068-A-C 11896362-A-C **
14022847-T-C 11902141-T-C **
14038184-T-C 11917478-T-C **
14097889-C-A 11977183-C-A **
14151496-C-A 12030790-C-A **
14161689-G-A 12040983-G-A **
14176428-C-A 12055722-C-A **
14184361-G-A 12063655-G-A **
14228913-C-A 12108207-C-A **
14235927-T-C 12115221-T-C **
14310311-C-A 12189605-C-A **
14363448-G-T 12242743-G-T **
14392868-A-C 12272164-A-C **
14392895-T-A 12272191-T-A **
14423346-C-T 12302621-C-T FT80814 **
14430644-C-A 12309917-C-A **
14609798-TCA-T 12498000-TCA-T **
14610662-C-A 12498864-C-A **
14620648-A-G 12508846-A-G **
14620658-A-G 12508856-A-G **
14736047-C-A 12624115-C-A **
14807281-C-T 12695352-C-T **
14807310-C-A 12695381-C-A **
14807311-C-G 12695382-C-G **
14815247-T-C 12703318-T-C **
14990170-G-C 12878255-G-C **
15111474-G-C 12999561-G-C **
15132109-C-A 13020196-C-A **
15140606-C-A 13028693-C-A **
15171544-T-C 13059630-T-C **
15193378-C-A 13081464-C-A **
15201594-C-A 13089680-C-A **
15238916-G-A 13127002-G-A **
15288073-A-C 13176172-A-C **
15315423-G-A 13203528-G-A **
15333426-T-C 13221544-T-C **
15336568-A-G 13224686-A-G **
15358684-A-G 13246803-A-G **
15358690-A-G 13246809-A-G **
15365939-T-C 13254059-T-C **
15366397-C-A 13254517-C-A **
15366598-G-T 13254718-G-T **
15435317-T-G 13323437-T-G **
15581161-G-A 13469281-G-A **
15589571-C-A 13477691-C-A **
15593157-T-C 13481277-T-C **
15641847-G-A 13529967-G-A A6185 **
15641853-G-A 13529973-G-A **
15641856-C-T 13529976-C-T **
15660930-C-A 13549050-C-A **
15684189-T-C 13572309-T-C **
15712301-A-C 13600421-A-C **
15733848-T-A 13621968-T-A **
15743161-G-T 13631281-G-T **
15761786-T-G 13649906-T-G **
15821461-T-A 13709581-T-A **
15892182-T-G 13780302-T-G **
15904938-G-T 13793058-G-T **
15904985-A-T 13793105-A-T **
15909497-C-A 13797617-C-A **
15916184-A-G 13804304-A-G **
15924138-C-A 13812258-C-A **
15969930-C-A 13858050-C-A **
15999773-G-A 13887893-G-A **
16060664-G-A 13948784-G-A **
16073002-A-G 13961122-A-G **
16096481-G-T 13984601-G-T P8_Prx **
16184445-C-A 14072565-C-A **
16196219-C-A 14084339-C-A **
16305784-G-GTA 14193904-G-GTA **
16305786-GTA-G 14193906-GTA-G **
16305794-G-T 14193914-G-T **
16305806-T-A 14193926-T-A **
16405294-AT-A 14293414-AT-A **
16413426-C-A 14301546-C-A **
16425505-G-A 14313625-G-A **
16425509-A-G 14313629-A-G **
16471548-C-A 14359668-C-A **
16524931-C-A 14413051-C-A **
16588459-T-C 14476579-T-C **
16601461-C-A 14489581-C-A **
16609502-T-G 14497622-T-G **
16609509-C-G 14497629-C-G **
16665045-A-C 14553165-A-C **
16848669-TG-T 14736789-TG-T **
17238444-C-T 15126564-C-T **
17317761-C-A 15205881-C-A **
17340810-T-C 15228930-T-C **
17340812-C-A 15228932-C-A **
17372132-C-A 15260252-C-A **
17479850-T-C 15367970-T-C **
17501913-T-G 15390033-T-G **
17513813-A-C 15401933-A-C **
17638533-T-G 15526653-T-G **
17645618-C-A 15533738-C-A **
17645621-C-A 15533741-C-A **
17645636-G-A 15533756-G-A **
17672179-T-A 15560299-T-A FT80907 **
17697043-C-A 15585163-C-A **
17714993-T-A 15603113-T-A **
17718256-T-C 15606376-T-C **
17832454-C-A 15720574-C-A **
17871762-T-C 15759882-T-C **
17920839-G-A 15808959-G-A **
17952634-T-C 15840754-T-C BY118691 **
18042937-GGGGGAGGGGGGA-G 15931057-GGGGGAGGGGGGA-G **
18071980-C-A 15960100-C-A **
18174660-G-T 16062780-G-T **
18187074-C-T 16075194-C-T **
18190816-T-C 16078936-T-C **
18646074-A-T 16534194-A-T **
18698735-T-C 16586855-T-C **
18717872-G-T 16605992-G-T **
18723945-A-G 16612065-A-G **
18723949-C-T 16612069-C-T BZ1316 **
18723952-G-C 16612072-G-C **
18747177-A-T 16635297-A-T **
18763778-C-A 16651898-C-A **
18816926-C-A 16705046-C-A **
18856948-C-A 16745068-C-A **
18864901-T-G 16753021-T-G **
18972700-A-G 16860820-A-G **
18972777-G-A 16860897-G-A **
19007848-A-C 16895968-A-C **
19012493-A-T 16900613-A-T **
19054382-C-A 16942502-C-A **
19068039-A-C 16956159-A-C **
19143136-T-A 17031256-T-A **
19256346-GT-G 17144466-GT-G **
19302417-C-A 17190537-C-A **
19415614-C-T 17303734-C-T **
19449169-T-C 17337289-T-C **
19461161-T-G 17349281-T-G **
19462565-C-G 17350685-C-G **
19462579-T-C 17350699-T-C **
19462580-T-C 17350700-T-C **
19462592-G-A 17350712-G-A **
19465902-C-A 17354022-C-A **
19498032-AG-A 17386152-AG-A **
19523566-C-T 17411686-C-T **
19530499-T-C 17418619-T-C **
19563294-TA-T 17451414-TA-T **
19609573-A-G 17497693-A-G P5_Prx **
19744911-G-T 17633031-G-T P5_Prx **
19770062-A-T 17658182-A-T P5_Prx **
19770144-T-C 17658264-T-C P5_Prx **
19827451-T-C 17715571-T-C P5_Prx **
20066733-A-G 17954853-A-G P5_Dst **
20424784-G-T 18262898-G-T P5_Dst **
20567711-T-G 18405825-T-G P5_Dst **
20579299-CAT-C 18417413-CAT-C P5_Dst **
20685339-C-A 18523453-C-A P4_Prx **
20769923-C-A 18608037-C-A P4_Prx **
20897724-GGT-G 18735838-GGT-G P4_Dst **
20897740-T-G 18735854-T-G P4_Dst **
20897744-T-TG 18735858-T-TG P4_Dst **
21061719-G-A 18899833-G-A **
21061825-A-C 18899939-A-C **
21090897-A-G 18929011-A-G **
21111628-C-A 18949742-C-A **
21149622-C-A 18987736-C-A **
21182578-T-C 19020692-T-C **
21219660-G-A 19057774-G-A **
21371120-A-C 19209234-A-C **
21450799-T-A 19288913-T-A **
21472202-A-C 19310316-A-C **
21554497-C-T 19392611-C-T **
21554499-G-A 19392613-G-A **
21615939-C-A 19454053-C-A **
21625231-A-G 19463345-A-G **
21635355-T-A 19473469-T-A **
21690951-T-G 19529065-T-G **
21905353-C-G 19743467-C-G **
21934633-C-A 19772747-C-A **
21946503-T-A 19784617-T-A **
22059100-C-A 19897214-C-A **
22063841-C-A 19901955-C-A **
22079851-T-A 19917965-T-A **
22079865-A-T 19917979-A-T **
22079922-A-T 19918036-A-T **
22164264-G-C 20002378-G-C **
22165117-G-A 20003231-G-A **
22268529-T-A 20106643-T-A DYZ19 **
22268536-C-CTTA 20106650-C-CTTA DYZ19 **
22268539-TACG-T 20106653-TACG-T DYZ19 **
22359696-T-G 20197810-T-G DYZ19 **
22529500-G-A 20367614-G-A **
22587133-G-T 20425247-G-T **
22593867-T-A 20431981-T-A **
22689841-A-C 20527955-A-C **
22776863-C-A 20614977-C-A **
22843810-C-T 20681924-C-T **
22881448-G-A 20719562-G-A **
22881472-C-A 20719586-C-A **
22936315-A-T 20774429-A-T **
22949786-C-A 20787900-C-A **
23264228-A-T 21102342-A-T **
23433611-A-C 21271725-A-C **
23439891-ATTTTGTTTTTTTTGTTTTTTTTT-A 21278005-ATTTTGTTTTTTTTGTTTTTTTTT-A **
23440527-T-A 21278641-T-A **
23459610-G-A 21297724-G-A **
23471056-A-G 21309170-A-G **
23475537-A-C 21313651-A-C **
23476255-A-G 21314369-A-G **
23529616-C-A 21367730-C-A **
23579136-A-G 21417250-A-G **
23579147-T-A 21417261-T-A **
23625586-A-G 21463700-A-G **
23625590-T-C 21463704-T-C **
23773874-T-C 21611988-T-C **
23773875-G-C 21611989-G-C **
23832956-C-T 21671070-C-T **
23954267-T-C 21808120-T-C **
24221224-T-C 22075077-T-C P3_b1 **
24235434-T-G 22089287-T-G P3_b1 **
24517643-C-A 22371496-C-A **
24878380-C-A 22732233-C-A g1 **
26002575-T-G 23856428-T-G P1_Y1 **
26133117-T-G 23986970-T-G P1_Y1 **
26170611-G-T 24024464-G-T P1_Y1 **
26422493-G-A 24276346-G-A P1_Y1 **
26514936-C-CAT 24368789-C-CAT P1_Y1 **
26699129-C-A 24552982-C-A P1_g2 **
27637132-A-T 25490985-A-T P1_Y2 **
27823876-A-G 25677729-A-G P1_Y2 **
27883649-T-A 25737502-T-A P1_Y2 **
27996128-A-AC 25849981-A-AC P1_Y2 **
28033130-A-C 25886983-A-C P1_Y2 **
28033134-A-AG 25886987-A-AG P1_Y2 **
28549910-G-T 26403763-G-T **
28568009-A-C 26421862-A-C **
28619421-C-A 26473274-C-A **
28619431-G-A 26473284-G-A **
28619432-A-G 26473285-A-G **
28632269-C-A 26486122-C-A **
28742049-T-C 26595902-T-C **
28758119-A-G 26611972-A-G **
28793805-A-G 26647658-A-G **
56835200-A-C **
56845698-A-G **
56847525-T-C **
56858148-T-C **
56858152-C-T **
56860327-ATGCT-A **
13815543-A-C 11694837-A-C FGC52777 DYZ17 ***
28800099-A-G 26653952-A-G ***
13678581-T-C 11522905-T-C DYZ17 ***
13707964-G-C 11552288-G-C BY25130 DYZ17 ***
13859368-T-A 11738662-T-A DYZ17 ***
6753384-T-C 6885343-T-C L1064 ******
13466476-G-A 11310800-G-A ***
22005300-CTT-C 19843414-CTT-C 13×T***
13447314-T-C 11291638-T-C 8×TCCAC***
58978571-G-A 56832424-G-A ***
13466420-A-G 11310744-A-G ***
13493905-T-C 11338229-T-C ***
14331156-TGC-T 12210450-TGC-T ***
23196651-T-G 21034765-T-G ***
10016313-T-A 10178704-T-A ***
13686882-G-A 11531206-G-A DYZ17 ***
3012765-CAT-C 3144724-CAT-C ***
13846668-C-T 11725962-C-T F11172 DYZ17 ***
13447330-T-TTCACG 11291654-T-TTCACG ***
13140511-T-C 10629997-T-C ***
25380934-G-C 23234787-G-C P2_r2 ***
13472672-G-T 11316996-G-T ***
13472682-G-A 11317006-G-A BY47625 ***
13472717-C-A 11317041-C-A ***
13809751-A-T 11689045-A-T DYZ17 ***
13450104-CTCCACTCCACCCCATCCCATCCCATTCTATTCCAT-C,CTCCATTCCACCCCATTCCATTCCTTTCCATTCCAT 11294428-CTCCACTCCACCCCATCCCATCCCATTCTATTCCAT-C,CTCCATTCCACCCCATTCCATTCCTTTCCATTCCAT ***
16679134-A-G 14567254-A-G ***
6753387-A-G 6885346-A-G L250 ******
14168640-TAA-T,TAAA 12047934-TAA-T,TAAA 12×A******
19910616-C-T 17798736-C-T P5_Prx ***
21291218-C-A 19129332-C-A ***
22236925-C-G 20075039-C-G DYZ19 ***
22422105-G-C 20260219-G-C DYZ19 ***
24168705-T-C 22022558-T-C P3_b1 ***
15405313-C-A 13293433-C-A ***
22919315-C-A 20757429-C-A Y110122 ***
7179760-G-T 7311719-G-T ***
10973984-G-A,T ***
17038241-ATT-A 14926361-ATT-A 13×T***
10755392-AT-A,TG ***
10746953-C-T ***
11014453-A-T ***
13578034-CAAA-C 11422358-CAAA-C 14×A***
14771683-G-T 12659752-G-T ***
56742724-A-G ***
18709290-CA-C 16597410-CA-C 10×A***
4930682-C-A 5062641-C-A ***
15956866-CTTTT-C 13844986-CTTTT-C 15×T***
21773948-C-A 19612062-C-A ***
19337654-TTG-T 17225774-TTG-T ***
10958348-C-CCACTG ***
5829135-C-A 5961094-C-A ***
14231997-T-G 12111291-T-G ***
11019416-TTCCAC-T ***
21235209-C-A 19073323-C-A FT383389 ***
8056073-G-T 8188032-G-T ***
16271807-GAAAA-G,GAAA 14159927-GAAAA-G,GAAA 19×A***
18740721-C-A 16628841-C-A ***
22729245-GA-G,GAA 20567359-GA-G,GAA 13×A***
19124960-G-T 17013080-G-T ***
25995094-G-A 23848947-G-A P1_Y1 ***
17584173-C-T 15472293-C-T ***
17503374-C-A 15391494-C-A Y99343 ***
21446246-G-T 19284360-G-T ***
20001304-G-A 17889424-G-A P5_Prx ***
22295290-G-T 20133404-G-T DYZ19 ***
15066488-C-A 12954579-C-A ***
28714489-C-A 26568342-C-A ***
10983874-C-A ***
21235211-C-A 19073325-C-A ***
5603500-C-A 5735459-C-A ***
56828701-T-G ***
19529077-C-A 17417197-C-A Y30016 ***
7098893-G-T 7230852-G-T ***
14458558-CAAAAAAAA-C 12337831-CAAAAAAAA-C 21×A***
9944082-G-T 10106473-G-T ***
58979508-C-T 56833361-C-T ***
14376958-C-A 12256254-C-A ***
26024712-GT-G 23878565-GT-G P1_Y1 10×T***
10958334-C-CT ***
7775865-C-A 7907824-C-A ***
56827376-C-A ***
17038315-G-T 14926435-G-T ***
9952224-C-A 10114615-C-A ***
10847046-T-A ***
10673432-C-A ***
8140243-C-A 8272202-C-A ***
10832467-T-C ***
21549200-TA-A,T 19387314-TA-A,T ***
15512642-TAA-T 13400762-TAA-T 13×A***
7082561-C-A 7214520-C-A ***
10668285-C-A ***
17170194-A-C 15058314-A-C ***
56828671-T-A ***
56828678-C-A ***
56828679-C-G ***
56828709-C-T ***
56828710-A-T ***
56828723-C-T ***
15140644-C-A 13028731-C-A ***
10954921-C-A ***
15223032-C-A 13111118-C-A ***
17631020-C-A 15519140-C-A ***
14513374-C-A 12401579-C-A ***
2798954-T-C 2930913-T-C ***
2798961-A-G 2930920-A-G ***
2892552-T-C 3024511-T-C ***
3152262-ATTTTATTTTAT-A,ATTTTATTTTA 3284221-ATTTTATTTTAT-A,ATTTTATTTTA ***
5200011-C-A 5331970-C-A ***
6368856-G-T 6500815-G-T ***
7146104-C-A 7278063-C-A ***
7163487-C-A 7295446-C-A ***
7255065-T-C 7387024-T-C ***
7329458-A-T 7461417-A-T ***
8096742-C-A 8228701-C-A ***
8470549-C-CAA 8602508-C-CAA 22×A***
9735917-A-G 9898308-A-G IR3_Prx ***
9820401-G-T 9982792-G-T ***
9821547-T-A 9983938-T-A ***
9856029-C-A 10018420-C-A FT260230 ***
9934306-C-A 10096697-C-A ***
10693991-A-AATTCCATTCCGTTCCATTCC ***
10751573-C-A ***
11001708-C-A ***
11011417-C-A ***
11018804-C-A ***
13446480-G-T 11290804-G-T ***
11669734-T-C DYZ17 ***
13866799-G-T 11746093-G-T DYZ17 ***
14060245-A-C 11939539-A-C ***
14340851-G-T 12220146-G-T ***
14591813-C-A 12480013-C-A 12×T***
14816106-G-A 12704177-G-A ***
15722636-C-T 13610756-C-T ***
16274404-C-A 14162524-C-A ***
16365124-G-GAT 14253244-G-GAT ***
16830461-C-A 14718581-C-A ***
17515256-C-A 15403376-C-A ***
17685626-TAAAAA-T 15573746-TAAAAA-T 9×A***
17685638-G-C 15573758-G-C 8×A***
18031343-C-A 15919463-C-A ***
18242085-C-A 16130205-C-A ***
18723911-C-T 16612031-C-T ***
18806191-A-T 16694311-A-T ***
19479747-T-C 17367867-T-C ***
19536231-T-C 17424351-T-C ***
21929580-A-ATG 19767694-A-ATG 10×TG***
22047796-C-A 19885910-C-A ***
23127414-CAAAAA-C,CA 20965528-CAAAAA-C,CA 24×A***
23564752-G-T 21402866-G-T ***
24446701-G-T 22300554-G-T ***
27637198-TCA-T,TCACACA 25491051-TCA-T,TCACACA P1_Y2 17×CA***
56838412-G-A,T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.