Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF41/S524 > Z43690 > A874 > A875 > A1786

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
467471
BigY2
467471
13687616-G-A 11531940-G-A A*
22310882-C-G 20148996-C-G DYZ19 ***A*
22454261-T-A 20292375-T-A DYZ19 A*
26094786-G-A 23948639-G-A P1_Y1 ***A*
23727661-G-A 21565775-G-A ***A*
19963582-G-A 17851702-G-A P5_Prx ***A*
20651005-T-C 18489119-T-C P4_Prx ***A*
17565327-T-C 15453447-T-C Y99558 YY++
17805210-A-G 15693330-A-G Y100278 YY++
17814003-C-G 15702123-C-G Y100311 YY++
18423413-T-G 16311533-T-G Y101993 P6_Gap ++
19501212-G-A 17389332-G-A Y104969 YY++
22477571-G-C 20315685-G-C DYZ19 ***+
22442379-C-T 20280493-C-T DYZ19 ***+
22476328-T-A 20314442-T-A BY53147 DYZ19 ***+
13818666-T-C 11697960-T-C BY54485 **+
22510778-A-T 20348892-A-T DYZ19 ***+
22711517-T-G 20549631-T-G Y109535 YY++
22805216-A-G 20643330-A-G Y109801 YY++
23032168-T-C 20870282-T-C Y110375 YY++
23150932-T-G 20989046-T-G Y110812 YY++
23466133-C-T 21304247-C-T Y111616 YY++
16654983-G-A 14543103-G-A BY109258 YY++
22463373-G-A 20301487-G-A DYZ19 ++
9966891-C-T 10129282-C-T BY82260 Y++
7395841-T-C 7527800-T-C YY+**
2889476-G-C 3021435-G-C Y81743 YY++
7133122-A-C 7265081-A-C F15623 YY++
22484629-G-A 20322743-G-A DYZ19 ++
7594634-A-C 7726593-A-C Y84395 YY++
17198458-GGAAA-G,GGAGA 15086578-GGAAA-G,GGAGA ****
16243090-T-A 14131210-T-A S6337 **
15904149-C-T 13792269-C-T 20×A**
15905873-C-A 13793993-C-A **
15917465-C-A 13805585-C-A **
15924155-G-T 13812275-G-T **
15392548-C-A 13280668-C-A **
15927684-A-G 13815804-A-G **
15988172-G-T 13876292-G-T **
16006595-T-C 13894715-T-C **
16007260-A-G 13895380-A-G **
16019134-G-A 13907254-G-A **
16038106-G-C 13926226-G-C **
16046394-A-C 13934514-A-C **
16047308-T-G 13935428-T-G **
16051014-C-A 13939134-C-A **
16047310-G-T 13935430-G-T **
16060680-C-A 13948800-C-A **
16066570-A-T 13954690-A-T **
15871691-G-A 13759811-G-A **
16071819-T-A 13959939-T-A **
16175167-T-A 14063287-T-A **
16179876-T-G 14067996-T-G **
16184349-C-T 14072469-C-T **
16184377-A-T 14072497-A-T **
16184381-C-G 14072501-C-G **
16214043-A-C 14102163-A-C **
16226543-C-A 14114663-C-A **
16241821-C-A 14129941-C-A **
16245863-T-C 14133983-T-C **
15894136-C-A 13782256-C-A **
15400034-G-C 13288154-G-C **
15871683-T-C 13759803-T-C **
15761527-A-T 13649647-A-T **
15728273-T-C 13616393-T-C **
15731331-A-C 13619451-A-C **
15684627-C-A 13572747-C-A **
15677229-A-T 13565349-A-T **
15670261-G-T 13558381-G-T **
15653604-A-T 13541724-A-T **
15650651-A-G 13538771-A-G **
15731411-G-T 13619531-G-T **
15735778-A-T 13623898-A-T **
15743140-T-G 13631260-T-G **
15744033-C-A 13632153-C-A **
15746414-C-A 13634534-C-A **
15753265-C-A 13641385-C-A **
15622432-A-C 13510552-A-C **
15871680-T-C 13759800-T-C **
16278428-T-C 14166548-T-C **
15620476-A-G 13508596-A-G **
15616326-A-G 13504446-A-G **
15763152-T-G 13651272-T-G **
15585120-G-T 13473240-G-T **
15496975-T-G 13385095-T-G **
15496962-G-T 13385082-G-T **
15486072-C-G 13374192-C-G **
15486032-C-A 13374152-C-A **
15412802-C-T 13300922-C-T **
15410484-A-C 13298604-A-C **
15781769-C-A 13669889-C-A **
15688495-T-C 13576615-T-C **
15850945-C-A 13739065-C-A **
16253908-G-T 14142028-G-T **
16719670-G-T 14607790-G-T **
16278444-C-A 14166564-C-A **
17369307-TTC-T 15257427-TTC-T **
17103300-G-C 14991420-G-C **
17104279-G-C 14992399-G-C **
17133942-C-G 15022062-C-G **
17137107-T-A 15025227-T-A **
17211254-G-A 15099374-G-A **
17284646-C-A 15172766-C-A **
17300570-C-A 15188690-C-A **
17301139-T-C 15189259-T-C **
17319958-A-T 15208078-A-T **
17319958-A-AG 15208078-A-AG **
17326847-C-A 15214967-C-A **
17334064-CA-C 15222184-CA-C **
17338002-A-G 15226122-A-G **
17382592-C-A 15270712-C-A **
17079148-G-C 14967268-G-C **
17406786-C-G 15294906-C-G **
17425233-T-C 15313353-T-C **
17434149-C-A 15322269-C-A **
17440833-G-T 15328953-G-T **
17464752-C-A 15352872-C-A **
17475257-C-A 15363377-C-A **
17503738-G-C 15391858-G-C **
17535640-C-A 15423760-C-A **
17551621-G-T 15439741-G-T **
17584146-T-TA 15472266-T-TA **
17605036-T-C 15493156-T-C **
17633750-G-C 15521870-G-C **
17633751-G-C 15521871-G-C **
17685720-C-A 15573840-C-A **
17103277-C-T 14991397-C-T **
17071513-A-G 14959633-A-G **
16309569-C-T 14197689-C-T **
16746190-T-C 14634310-T-C **
16312396-C-A 14200516-C-A **
16371790-T-C 14259910-T-C Y96130 **
16402628-T-C 14290748-T-C **
16423766-G-T 14311886-G-T **
16471667-T-G 14359787-T-G **
16485870-C-A 14373990-C-A **
16522971-A-G 14411091-A-G **
16603222-G-C 14491342-G-C **
16612433-C-A 14500553-C-A **
16648181-C-A 14536301-C-A **
16654802-T-A 14542922-T-A **
16656118-T-C 14544238-T-C **
16694355-A-T 14582475-A-T **
15372512-A-G 13260632-A-G **
16760026-C-A 14648146-C-A **
17058523-A-C 14946643-A-C **
16760282-C-A 14648402-C-A **
16765585-G-A 14653705-G-A **
16765590-T-C 14653710-T-C **
16765596-A-AT 14653716-A-AT **
16765606-T-A 14653726-T-A **
16843212-C-T 14731332-C-T **
16847655-C-A 14735775-C-A **
16868494-G-A 14756614-G-A **
16868576-G-A 14756696-G-A **
16897691-A-C 14785811-A-C **
16914288-T-A 14802408-T-A **
16987817-T-G 14875937-T-G **
16989913-G-C 14878033-G-C **
17048092-C-A 14936212-C-A **
15391285-C-A 13279405-C-A **
15172623-C-T 13060709-C-T **
15336686-T-G 13224804-T-G **
14227656-G-T 12106950-G-T **
14050799-T-C 11930093-T-C **
14065303-C-A 11944597-C-A **
14065816-G-T 11945110-G-T **
14065818-C-G 11945112-C-G **
14067845-A-C 11947139-A-C **
14079997-C-A 11959291-C-A **
14080006-A-C 11959300-A-C **
14080350-A-G 11959644-A-G **
14101314-T-C 11980608-T-C **
14107834-C-A 11987128-C-A **
14142462-C-A 12021756-C-A **
14219554-T-C 12098848-T-C **
14219714-CAAAAA-C 12099008-CAAAAA-C 14×A**
14235932-C-A 12115226-C-A **
14034364-G-T 11913658-G-T **
14241347-C-G 12120641-C-G **
14245215-G-A 12124509-G-A **
14253077-A-T 12132371-A-T **
14253157-A-T 12132451-A-T **
14284075-T-A 12163369-T-A **
14286213-G-T 12165507-G-T **
14310441-C-A 12189735-C-A **
14315484-T-A 12194778-T-A **
14316253-G-T 12195547-G-T **
14359918-T-A 12239213-T-A **
14364186-G-T 12243481-G-T **
14366784-C-A 12246079-C-A **
14371161-C-A 12250457-C-A **
14372242-C-G 12251538-C-G **
14035997-T-G 11915291-T-G **
13987377-T-G 11866671-T-G **
14379994-T-G 12259290-T-G **
13899906-CT-C 11779200-CT-C **
11644723-C-A **
11646578-T-G **
11651458-A-G **
11652330-G-T **
11653461-G-T **
11659889-A-T **
13856349-A-G 11735643-A-G **
13858453-C-A 11737747-C-A **
13860504-A-C 11739798-A-C **
13868670-G-A 11747964-G-A **
13872322-T-C 11751616-T-C **
13872324-A-G 11751618-A-G **
13884995-G-A 11764289-G-A **
13917537-G-T 11796831-G-T **
13987370-T-A 11866664-T-A **
13934367-G-A 11813661-G-A **
13934372-A-G 11813666-A-G **
17319949-G-A 15208069-G-A 4×AGAA**
13934463-C-A 11813757-C-A **
13939097-C-A 11818391-C-A **
13939318-C-A 11818612-C-A **
13941024-A-C 11820318-A-C **
13941630-T-G 11820924-T-G **
13942541-C-A 11821835-C-A **
13945272-C-A 11824566-C-A **
13958636-A-T 11837930-A-T **
13987332-T-G 11866626-T-G **
13987365-A-G 11866659-A-G **
13987368-A-G 11866662-A-G **
14376651-T-G 12255947-T-G **
14385022-C-A 12264318-C-A **
15333868-G-T 13221986-G-T **
15115541-A-G 13003628-A-G **
14807347-G-A 12695418-G-A **
14807403-G-T 12695474-G-T **
14810977-G-A 12699048-G-A **
14908248-C-A 12796315-C-A **
14925956-G-A 12814021-G-A **
14931708-T-C 12819773-T-C **
14969113-C-A 12857188-C-A **
15029555-C-A 12917643-C-A **
15029562-C-T 12917650-C-T **
15051353-C-A 12939444-C-A **
15059514-T-C 12947606-T-C **
15059818-C-G 12947910-C-G **
15080935-C-A 12969025-C-A **
15156101-C-G 13044188-C-G **
14771709-C-A 12659778-C-A **
17714095-C-A 15602215-C-A **
15176560-G-T 13064646-G-T **
15197523-C-A 13085609-C-A **
15210930-T-A 13099016-T-A **
15212212-C-A 13100298-C-A **
15235517-G-A 13123603-G-A **
15235546-C-A 13123632-C-A **
15235599-G-T 13123685-G-T **
15242613-T-A 13130699-T-A **
15271038-G-A 13159127-G-A **
15310942-A-G 13199047-A-G **
15323429-C-G 13211547-C-G **
15324089-C-A 13212207-C-A **
15333863-A-G 13221981-A-G **
14785470-G-A 12673540-G-A **
14764843-T-G 12652912-T-G **
14413173-A-T 12292470-A-T **
14571944-T-A 12460144-T-A **
14425697-C-T 12304972-C-T **
14427657-T-A 12306932-T-A **
14444888-C-A 12324161-C-A **
14448305-C-A 12327578-C-A **
14468449-C-A 12347718-C-A **
14468839-C-A 12348108-C-A **
12375584-C-A **
14515601-G-T 12403802-G-T **
14521775-C-A 12409976-C-A **
14522377-C-A 12410578-C-A **
14547256-C-A 12435457-C-A **
14566974-A-T 12455174-A-T **
14567029-A-T 12455229-A-T **
14582367-A-C 12470567-A-C **
14754115-C-A 12642184-C-A **
14592696-C-A 12480896-C-A **
14619401-T-G 12507599-T-G **
14622144-C-G 12510342-C-G **
14629749-C-G 12517818-C-G **
14669272-G-T 12557338-G-T **
14669316-G-T 12557382-G-T **
14669375-G-T 12557441-G-T **
14685735-C-A 12573801-C-A **
14688867-T-G 12576933-T-G **
14715429-G-T 12603496-G-T **
14715663-A-C 12603730-A-C **
14726583-G-T 12614651-G-T **
14726640-T-A 12614708-T-A **
14749180-C-A 12637249-C-A **
17693597-C-A 15581717-C-A **
13934407-C-T 11813701-C-T **
17737425-A-G 15625545-A-G **
22834005-C-A 20672119-C-A **
22200048-T-C 20038162-T-C **
22204530-A-G 20042644-A-G **
22204892-G-C 20043006-G-C **
22309858-G-C 20147972-G-C DYZ19 **
22345988-AGATTTGTCCAGTTTCTTCCTTCTGGAAG-A 20184102-AGATTTGTCCAGTTTCTTCCTTCTGGAAG-A DYZ19 **
22517161-C-A 20355275-C-A **
22524885-C-A 20362999-C-A **
22587138-G-C 20425252-G-C **
22590752-C-T 20428866-C-T **
22598254-A-C 20436368-A-C **
22634942-T-C 20473056-T-C **
22651494-T-G 20489608-T-G **
22675662-T-C 20513776-T-C **
22866341-C-A 20704455-C-A **
22166756-G-T 20004870-G-T **
22871367-T-C 20709481-T-C **
22965213-A-G 20803327-A-G **
22996899-A-G 20835013-A-G **
22996943-C-A 20835057-C-A **
23059488-C-A 20897602-C-A **
23068188-C-A 20906302-C-A **
23120129-A-G 20958243-A-G **
23128825-C-A 20966939-C-A **
23138130-A-C 20976244-A-C **
23141114-C-A 20979228-C-A **
23205835-T-A 21043949-T-A **
23274875-G-T 21112989-G-T **
23309301-C-A 21147415-C-A **
23310567-T-A 21148681-T-A **
22173743-T-C 20011857-T-C **
22132978-C-G 19971092-C-G **
23327398-T-C 21165512-T-C **
21912211-C-A 19750325-C-A **
21671622-G-T 19509736-G-T **
21714193-C-A 19552307-C-A **
21722209-T-A 19560323-T-A **
21738668-C-A 19576782-C-A **
21738703-A-G 19576817-A-G **
21738705-A-G 19576819-A-G **
21771668-T-G 19609782-T-G **
21821499-T-G 19659613-T-G **
21821509-C-T 19659623-C-T **
21823036-A-C 19661150-A-C **
21840933-G-A 19679047-G-A **
21873566-C-A 19711680-C-A 14×A**
21899805-G-T 19737919-G-T **
21921819-C-A 19759933-C-A **
22123152-C-A 19961266-C-A **
21932690-T-C 19770804-T-C **
21935227-C-A 19773341-C-A **
21974922-G-C 19813036-G-C **
21985058-C-T 19823172-C-T **
22032752-G-C 19870866-G-C **
22041580-C-A 19879694-C-A **
22044740-G-A 19882854-G-A **
22045605-T-A 19883719-T-A **
22052634-C-G 19890748-C-G Y108253 **
22055575-T-A 19893689-T-A **
22065400-A-G 19903514-A-G **
22068531-C-A 19906645-C-A **
22076284-T-C 19914398-T-C **
22123099-C-G 19961213-C-G **
23311417-G-T 21149531-G-T **
23372318-C-A 21210432-C-A **
21639030-A-T 19477144-A-T **
28610065-CT-C 26463918-CT-C **
27595838-C-A 25449691-C-A P1_Y2 **
27596003-C-A 25449856-C-A P1_Y2 **
27618222-A-G 25472075-A-G P1_Y2 **
27883219-T-A 25737072-T-A P1_Y2 **
27952159-G-T 25806012-G-T P1_Y2 **
28462173-G-T 26316026-G-T **
28530614-C-A 26384467-C-A **
28537149-C-A 26391002-C-A **
28537654-C-A 26391507-C-A **
28549086-G-T 26402939-G-T **
28562263-T-C 26416116-T-C **
28598476-G-T 26452329-G-T **
28601023-A-G 26454876-A-G **
28612362-A-G 26466215-A-G **
27546708-G-T 25400561-G-T P1_Y2 **
28659391-C-T 26513244-C-T **
28661528-A-G 26515381-A-G **
28688563-G-A 26542416-G-A Y113280 **
28700350-C-A 26554203-C-A **
28701801-C-A 26555654-C-A **
28724434-C-A 26578287-C-A **
28728298-T-G 26582151-T-G **
28741181-C-A 26595034-C-A **
28767302-C-A 26621155-C-A **
28780836-A-G 26634689-A-G **
56823327-C-T **
56828254-G-T **
56843284-G-T **
56851622-A-C **
27585944-A-C 25439797-A-C P1_Y2 **
27461983-T-C 25315836-T-C P1_Y2 **
23397283-C-A 21235397-C-A **
24276361-CACA-C 22130214-CACA-C P3_b1 **
23425470-C-A 21263584-C-A **
23425475-G-T 21263589-G-T **
23427033-C-A 21265147-C-A **
23435970-G-T 21274084-G-T **
23442744-C-A 21280858-C-A **
23526117-A-C 21364231-A-C **
23792455-T-A 21630569-T-A **
23831164-A-G 21669278-A-G **
23833044-A-T 21671158-A-T **
23875122-G-A 21713236-G-A **
21752270-C-A **
23983353-C-T 21837206-C-T **
23983379-CA-C 21837232-CA-C **
24407720-G-T 22261573-G-T **
27007870-C-A 24861723-C-A P1_r4 **
24422077-C-A 22275930-C-A **
24459380-C-T 22313233-C-T **
24466281-C-A 22320134-C-A **
24472626-C-G 22326479-C-G **
24502253-C-A 22356106-C-A **
24892505-G-T 22746358-G-T g1 **
25246474-T-TGTTCTGTG 23100327-T-TGTTCTGTG P2_r1 **
25592917-T-TAC 23446770-T-TAC P1_gr1 **
25722802-C-A 23576655-C-A P1_b3 **
25736939-A-G 23590792-A-G P1_b3 **
25912008-G-T 23765861-G-T P1_Y1 **
26170426-G-A 24024279-G-A P1_Y1 **
26179638-G-T 24033491-G-T P1_Y1 **
26418767-G-T 24272620-G-T P1_Y1 **
21650582-C-A 19488696-C-A **
21617709-G-T 19455823-G-T **
17739785-C-T 15627905-C-T Y100069 **
18708109-A-G 16596229-A-G PH3932 **
18384476-G-A 16272596-G-A P6_Gap **
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13198941-A-G 11043265-A-G **
13198944-A-G 11043268-A-G **
13198953-C-G 11043277-C-G **
13208100-C-A 11052424-C-A **
25885855-G-GAAA 23739708-G-GAAA P1_Y1 **
10775918-T-G **
10794300-A-T **
19302337-C-A 17190457-C-A **
8718916-C-A 8850875-C-A **
8156582-C-A 8288541-C-A **
22506803-G-A 20344917-G-A DYZ19 *****
8279893-C-T 8411852-C-T **
8282475-G-T 8414434-G-T **
8290622-C-T 8422581-C-T **
8333737-TG-T 8465696-TG-T **
8351755-C-A 8483714-C-A **
8407314-C-A 8539273-C-A **
8540590-T-C 8672549-T-C **
8660463-C-A 8792422-C-A **
8698733-C-T 8830692-C-T **
8776511-C-A 8908470-C-A **
8142852-G-T 8274811-G-T **
8846689-T-G 8978648-T-G **
8913390-C-A 9045349-C-A **
9119172-C-A **
8974774-G-T 9137165-G-T **
8981198-A-G 9143589-A-G **
22369005-A-G 20207119-A-G DYZ19 **
8983428-G-T 9145819-G-T **
9044077-C-A 9206468-C-A **
10768991-T-C **
9131294-C-T 9293685-C-T **
9131307-T-G 9293698-T-G **
9131329-T-G 9293720-T-G **
8155763-C-A 8287722-C-A **
8105034-C-A 8236993-C-A **
9351229-C-T 9513620-C-T **
7704594-T-A 7836553-T-A **
7385713-G-T 7517672-G-T **
7385978-C-A 7517937-C-A **
7401137-G-T 7533096-G-T **
7413506-C-G 7545465-C-G **
7425174-T-G 7557133-T-G **
7433491-G-T 7565450-G-T **
7469983-C-A 7601942-C-A IR1_L **
21836708-C-A 19674822-C-A **
7579047-G-T 7711006-G-T **
7579655-C-A 7711614-C-A **
7640913-C-A 7772872-C-A **
7645113-C-A 7777072-C-A **
17885118-A-G 15773238-A-G **
8077770-C-A 8209729-C-A **
7704600-A-C 7836559-A-C **
7704603-T-A 7836562-T-A **
7721202-T-A 7853161-T-A **
7721208-A-G 7853167-A-G **
7758180-C-T 7890139-C-T **
7832238-C-A 7964197-C-A **
7866956-T-A 7998915-T-A **
7270315-G-T 7402274-G-T **
8020549-T-AA 8152508-T-AA **
8056151-C-A 8188110-C-A **
18844010-C-A 16732130-C-A **
8056160-C-A 8188119-C-A **
9214455-G-T 9376846-G-T **
9094613-G-T 9257004-G-T **
9398029-T-A 9560420-T-A **
10660050-C-A **
9942234-T-A 10104625-T-A **
10654369-T-C **
9964235-C-A 10126626-C-A **
10666013-C-A **
10662869-T-A **
10662866-C-G **
10662671-C-A **
9979226-T-C 10141617-T-C **
15595096-C-G 13483216-C-G ****
9941599-T-G 10103990-T-G **
9985953-G-T 10148344-G-T **
10659878-C-A **
14300124-C-A 12179418-C-A **
9986256-C-G 10148647-C-G **
10004443-G-T 10166834-G-T **
10031257-A-G 10193648-A-G **
10653392-C-T **
10656838-C-A **
10653524-T-C **
9942223-ATTT-A 10104614-ATTT-A **
9943580-C-A 10105971-C-A **
9932753-T-C 10095144-T-C **
9666528-A-C 9828919-A-C IR3_Prx **
10767396-C-A **
9398099-G-C 9560490-G-C **
10766594-T-A **
9401786-C-A 9564177-C-A **
9456670-C-A 9619061-C-A **
9577046-G-A 9739437-G-A IR3_Prx **
9577050-T-A 9739441-T-A IR3_Prx **
10685478-C-A **
9618346-G-T 9780737-G-T IR3_Prx **
10654237-TGTCAA-T **
9666559-C-T 9828950-C-T IR3_Prx **
9777176-T-G 9939567-T-G **
9666602-A-C 9828993-A-C IR3_Prx **
9666631-T-G 9829022-T-G IR3_Prx **
9804041-C-G 9966432-C-G **
10744597-T-G **
10694132-A-C **
2885905-C-A 3017864-C-A ***
9075161-C-A 9237552-C-A ***
17923365-C-A 15811485-C-A ***
7244073-G-A 7376032-G-A L477FGC13661 ***
56846992-C-A,T ***
13804507-A-T 11683801-A-T ***
23097168-T-C 20935282-T-C ***
23807407-C-A 21645521-C-A ***
56850158-C-A ***
21572228-GAA-G,GA 19410342-GAA-G,GA 14×A***
56842343-G-T ***
8810858-C-A 8942817-C-A ***
23576565-C-A 21414679-C-A ***
22285436-A-C 20123550-A-C DYZ19 ***
22288732-C-T 20126846-C-T DYZ19 ******
22339500-TC-T 20177614-TC-T DYZ19 ***
22365880-A-G 20203994-A-G DYZ19 ***
23433685-G-T 21271799-G-T ***
23441180-C-A 21279294-C-A ***
22266860-T-G 20104974-T-G DYZ19 ***
21469225-C-T 19307339-C-T ***
23572851-T-C 21410965-T-C ***
22223117-CG-C 20061231-CG-C DYZ19 ***
24082907-A-G 21936760-A-G P3_b1 ***
3593007-C-A 3724966-C-A ***
26192668-G-T 24046521-G-T P1_Y1 ***
24873645-C-A 22727498-C-A g1 ***
23192007-GAAAATTTTCTCCC-G 21030121-GAAAATTTTCTCCC-G ***
56832407-C-A ***
15592546-T-A 13480666-T-A ***
26418513-G-A 24272366-G-A P1_Y1 ***
14288988-C-A 12168282-C-A ***
15160621-C-A 13048707-C-A ***
13138209-CCCATT-C,TCCACT 10627695-CCCATT-C,TCCACT ***
23807408-G-A 21645522-G-A ***
6028883-C-A 6160842-C-A ***
17864205-G-T 15752325-G-T ***
22849729-C-A 20687843-C-A ***
8271322-C-A 8403281-C-A ***
9979672-C-A 10142063-C-A ***
15592548-A-G 13480668-A-G ***
9880835-C-A 10043226-C-A ***
15779811-C-A 13667931-C-A ***
15864313-G-A 13752433-G-A ***
9170130-A-G 9332521-A-G ***
9089208-C-A 9251599-C-A ***
15951512-A-G 13839632-A-G ***
16199780-C-A 14087900-C-A ***
10059574-C-A 10221965-C-A ***
16213687-C-A 14101807-C-A ***
8117470-T-A 8249429-T-A ***
8084126-C-A 8216085-C-A ***
16284318-C-A 14172438-C-A ***
7974555-C-A 8106514-C-A ***
7939140-C-A 8071099-C-A ***
16651433-CTTT-C,CTT 14539553-CTTT-C,CTT 16×T***
7564349-A-G 7696308-A-G ***
16936041-A-G 14824161-A-G ***
15486224-T-C 13374344-T-C ***
15352141-TAAAA-T 13240260-TAAAA-T 13×A***
7244071-G-A 7376030-G-A ***
10877248-C-A ***
13526281-C-A 11370605-C-A ***
13478363-C-G 11322687-C-G ***
13421241-C-A 11265565-C-A ***
14036988-C-A 11916282-C-A BY92505 ***
14042998-CA-C 11922292-CA-C 10×A***
14043788-C-G 11923082-C-G ***
11000399-A-C ***
14339723-C-A 12219018-C-A ***
14702187-A-G 12590253-A-G ***
10658854-C-A ***
14749278-C-A 12637347-C-A ***
14780769-C-A 12668839-C-A ***
14876714-C-A 12764784-C-A ***
14938532-GA-G 12826607-GA-G 9×A***
15090155-C-A 12978244-C-A ***
10770459-C-A ***
10766269-C-T ***
15254927-C-A 13143013-C-A ***
15259067-C-A 13147151-C-A ***
7294869-C-A 7426828-C-A ***
17199319-GTT-G,GTTT 15087439-GTT-G,GTTT 13×T***
14767018-CTTTT-C 12655087-CTTTT-C 14×T***
21692399-C-A 19530513-C-A ***
2690584-T-A 2822543-T-A ***
21394722-C-A 19232836-C-A ***
23276382-C-A 21114496-C-A ***
21202423-C-A 19040537-C-A ***
21326686-C-A 19164800-C-A ***
21346061-A-ATT 19184175-A-ATT 12×T***
13801144-G-T 11680438-G-T ***
23368306-C-A 21206420-C-A ***
10755388-ACTCAT-A,ACTCCT ***
20829708-C-A 18667822-C-A P4_Gap ***
18050180-C-A 15938300-C-A ***
14932120-C-A 12820185-C-A ***
21962273-C-A 19800387-C-A ***
22010461-TC-T 19848575-TC-T ***
5200587-G-T 5332546-G-T ***
22201196-C-T 20039310-C-T ***
22515998-C-A 20354112-C-A ***
22627232-C-A 20465346-C-A ***
22829644-CAA-C,CAAA 20667758-CAA-C,CAAA 18×A***
21084385-ATG-A 18922499-ATG-A ***
2813036-C-G 2944995-C-G ***
17278132-C-A 15166252-C-A ***
18933123-C-A 16821243-C-A ***
17536739-C-A 15424859-C-A ***
17585689-C-A 15473809-C-A ***
9216683-G-C 9379074-G-C ***
18198392-C-A 16086512-C-A ***
18244379-C-A 16132499-C-A ***
18472764-G-T 16360884-G-T P6_Dst ***
18717875-CT-A 16605995-CT-A ***
4862681-C-A 4994640-C-A ***
18776836-C-A 16664956-C-A ***
18991697-C-A 16879817-C-A ***
20640199-C-A 18478313-C-A P4_Prx ***
19107256-C-A 16995376-C-A ***
19223022-C-A 17111142-C-A ***
19289286-C-A 17177406-C-A ***
19345296-AT-A 17233416-AT-A ***
3853920-C-A 3985879-C-A ***
19538240-C-A 17426360-C-A ***
3122756-A-T 3254715-A-T ***
3051709-C-A 3183668-C-A ***
2894738-C-A 3026697-C-A ***
17997313-T-C 15885433-T-C P7_Gap ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 4674711025547073711327436001
Kit: 467471910169874477877380792
Used in age calculations1025547074477877436001
Counts of SNPs1514
Variant counts last updated 2018-06-07 23:51:47.



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