Big Tree: Person Data

Tree Position

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Names	Region	McDonald BED	combBED	STR	FTDNA E21000	BigY2 E21000
6313486-C-T	6445445-C-T		IR3_Dst				***	A*
6321885-T-C	6453844-T-C		IR3_Dst				***	A*
6273132-C-T	6405091-C-T		IR3_Dst				***	A*
20658232-G-A	18496346-G-A		P4_Prx				***	A*
18351758-G-A	16239878-G-A		P6_Prx				***	A*
22314108-T-C	20152222-T-C		DYZ19					A*
28759090-A-C	26612943-A-C				Y		+	+
15976413-G-T	13864533-G-T			Y	Y		+	+
14196643-ACTCT-A	12075937-ACTCT-A						+	+
14769654-G-A	12657723-G-A			Y	Y		+	+
14811227-T-C	12699298-T-C			Y	Y		+	+
14940345-C-T	12828419-C-T			Y	Y		+	+
14984786-T-A	12872854-T-A			Y	Y		+	+
15050910-C-T	12939001-C-T			Y	Y		+	+
15466730-A-C	13354850-A-C			Y	Y		+	+
15966650-AAG-A	13854770-AAG-A						***	+
17514541-G-A	15402661-G-A			Y	Y		+	+
16409809-G-C	14297929-G-C			Y	Y		+	+
13803594-A-G	11682888-A-G						+	+
17514542-G-T	15402662-G-T			Y	Y		+	+
17550632-G-A	15438752-G-A			Y	Y		+	+
17651942-C-G	15540062-C-G			Y	Y		+	+
17910331-C-G	15798451-C-G			Y	Y		+	+
21513377-A-AT	19351491-A-AT						+	+
21696269-T-C	19534383-T-C			Y	Y		+	+
22595148-G-C	20433262-G-C			Y	Y		+	+
22700153-G-A	20538267-G-A			Y	Y		+	+
22824116-G-T	20662230-G-T			Y	Y		+	+
23543537-T-C	21381651-T-C			Y	Y		+	+
23554156-T-C	21392270-T-C			Y	Y		+	+
23770833-A-G	21608947-A-G				Y		+	+
13872374-GAAAT-G	11751668-GAAAT-G						**	+
15023570-A-C	12911658-A-C			Y	Y		+	+
9405229-G-A	9567620-G-A			Y	Y		+	+
22467677-A-G	20305791-A-G	BY21626	DYZ19				+
7959601-C-A	8091560-C-A			Y	Y		+	+
7446588-G-C	7578547-G-C		IR1_L				+	+
7316863-C-A	7448822-C-A			Y	Y		+	+
6716075-C-T	6848034-C-T			Y	Y		+	+
6715027-C-T	6846986-C-T			Y	Y		+	+
22467643-A-C	20305757-A-C	FGC1246	DYZ19				+	**
5999909-G-A	6131868-G-A						+	+
22267175-A-T	20105289-A-T		DYZ19					+
8982089-A-T	9144480-A-T				Y		+	+
9147153-A-G	9309544-A-G				Y		+	+
9147152-T-C	9309543-T-C	BY875			Y		+	+
18667929-T-TC	16556049-T-TC					9×C	***	*
22316907-C-G	20155021-C-G		DYZ19				***	*
14610880-GATACATAC-G	12499082-GATACATACATAC-G					9×ATAC	***	*
15893825-C-A	13781945-C-A							**
16134567-C-A	14022687-C-A	Y95496						**
15330794-C-A	13218912-C-A							**
15777961-C-A	13666081-C-A							**
15803380-C-A	13691500-C-A							**
15865590-T-C	13753710-T-C							**
15457956-A-T	13346076-A-T							**
15969921-C-A	13858041-C-A							**
15352811-CT-C	13240930-CT-C							**
16000101-G-T	13888221-G-T							**
16045860-C-A	13933980-C-A							**
16057405-C-A	13945525-C-A							**
16063087-C-G	13951207-C-G							**
16134288-C-A	14022408-C-A							**
15334405-C-A	13222523-C-A							**
15369084-C-A	13257204-C-A							**
15360788-G-A	13248908-G-A							**
15455053-C-A	13343173-C-A							**
15742411-C-A	13630531-C-A							**
15740926-A-C	13629046-A-C							**
15740823-C-A	13628943-C-A							**
15722548-C-A	13610668-C-A							**
15714354-C-A	13602474-C-A							**
15690147-T-C	13578267-T-C							**
15497505-C-A	13385625-C-A	Y93941						**
15497532-C-A	13385652-C-A							**
15382803-TA-T	13270923-TA-T					8×A		**
15393947-C-A	13282067-C-A							**
15399445-G-T	13287565-G-T							**
15400161-G-A	13288281-G-A							**
15433520-C-A	13321640-C-A							**
15595013-C-T	13483133-C-T							**
16691414-C-A	14579534-C-A							**
16170541-C-A	14058661-C-A							**
17330313-A-G	15218433-A-G							**
17128143-G-A	15016263-G-A							**
17157550-C-A	15045670-C-A							**
17192587-A-G	15080707-A-G							**
17330290-G-T	15218410-G-T							**
17330296-A-C	15218416-A-C							**
17330306-A-T	15218426-A-T							**
17330321-C-T	15218441-C-T							**
16867564-A-T	14755684-A-T							**
17330322-A-G	15218442-A-G							**
17338968-C-A	15227088-C-A							**
17347574-C-A	15235694-C-A							**
17536698-C-A	15424818-C-A							**
17539939-A-T	15428059-A-T							**
17622705-G-T	15510825-G-T							**
17023372-C-A	14911492-C-A							**
16750050-C-A	14638170-C-A							**
16226544-C-A	14114664-C-A							**
16430108-G-A	14318228-G-A							**
16246119-A-T	14134239-A-T							**
16298450-A-C	14186570-A-C							**
16363973-C-G	14252093-C-G							**
16364035-G-A	14252155-G-A							**
16424327-G-T	14312447-G-T							**
16428158-T-C	14316278-T-C							**
16463480-T-C	14351600-T-C							**
15276782-C-A	13164871-C-A							**
16479832-T-G	14367952-T-G							**
16539564-TG-T	14427684-TG-T							**
16540524-G-A	14428644-G-A							**
16571887-T-C	14460007-T-C							**
16577574-C-A	14465694-C-A							**
16592380-A-G	14480500-A-G							**
15321424-G-C	13209542-G-C							**
14506953-C-A	12395158-C-A							**
15198804-A-G	13086890-A-G							**
13484497-C-A	11328821-C-A							**
14225544-C-A	12104838-C-A							**
14108566-C-A	11987860-C-A							**
14027249-C-A	11906543-C-A							**
14022878-C-A	11902172-C-A							**
13997595-A-C	11876889-A-C							**
13885885-G-A	11765179-G-A							**
13878568-A-G	11757862-A-G							**
13838394-G-T	11717688-G-T							**
13805231-C-A	11684525-C-A							**
	11659450-T-A							**
	11655830-G-T							**
	11648274-A-T							**
13573165-C-A	11417489-C-A							**
13487513-A-G	11331837-A-G							**
13484096-T-C	11328420-T-C							**
14228935-C-A	12108229-C-A							**
13483130-G-C	11327454-G-C							**
13454695-T-C	11299019-T-C							**
13462370-C-G	11306694-C-G							**
13480066-A-T	11324390-A-T							**
13483104-G-C	11327428-G-C							**
13483109-A-G	11327433-A-G							**
13483128-T-A	11327452-T-A							**
13483138-G-C	11327462-G-C							**
13484082-C-A	11328406-C-A							**
13483151-T-C	11327475-T-C							**
13483184-G-C	11327508-G-C							**
13483196-C-A	11327520-C-A							**
13483199-G-A	11327523-G-A							**
13483960-C-T	11328284-C-T							**
13484075-A-C	11328399-A-C							**
14228200-C-A	12107494-C-A							**
14230298-T-G	12109592-T-G							**
15190155-C-A	13078241-C-A							**
14867141-C-A	12755211-C-A							**
14743970-C-A	12632039-C-A							**
14779477-T-C	12667547-T-C							**
14779481-A-T	12667551-A-T							**
14842433-C-A	12730499-C-A							**
14844937-C-A	12733003-C-A							**
14862984-C-A	12751050-C-A							**
14879785-ATT-A	12767855-ATT-A					11×T		**
14561240-C-A	12449441-C-A							**
14884535-C-A	12772601-C-A							**
14894002-C-A	12782068-C-A							**
14943603-A-G	12831677-A-G							**
14988691-C-A	12876757-C-A							**
15044143-C-A	12932233-C-A							**
15180804-C-A	13068890-C-A							**
14616566-C-T	12504764-C-T							**
14549576-G-T	12437777-G-T							**
14230313-G-C	12109607-G-C							**
14384930-G-T	12264226-G-T							**
14253100-A-G	12132394-A-G							**
14313552-G-T	12192846-G-T							**
14362620-C-A	12241915-C-A							**
14363419-C-A	12242714-C-A							**
14373695-GT-G	12252991-GT-G							**
14383479-G-A	12262775-G-A							**
14390133-T-C	12269429-T-C							**
14546865-T-C	12435066-T-C							**
14397344-A-G	12276640-A-G							**
14397351-A-C	12276647-A-C					10×T		**
14504529-C-A	12392734-C-A							**
17663107-C-T	15551227-C-T							**
14518306-C-A	12406507-C-A							**
14520912-C-A	12409113-C-A							**
17637767-C-T	15525887-C-T							**
18795012-G-A	16683132-G-A							**
17755902-G-C	15644022-G-C							**
22527281-C-A	20365395-C-A							**
23419244-C-A	21257358-C-A							**
23058517-G-A	20896631-G-A							**
23044158-G-A	20882272-G-A							**
22965237-G-T	20803351-G-T							**
22965000-C-T	20803114-C-T							**
22893422-C-A	20731536-C-A							**
22888590-C-A	20726704-C-A							**
22800650-A-G	20638764-A-G							**
22739656-C-A	20577770-C-A							**
22730340-AAGTCTC-A	20568454-AAGTCTC-A							**
22577079-C-A	20415193-C-A							**
22564968-C-A	20403082-C-A							**
22542503-C-A	20380617-C-A							**
22537515-A-G	20375629-A-G							**
22515261-C-A	20353375-C-A							**
23842593-G-T	21680707-G-T							**
21815178-C-A	19653292-C-A							**
21546163-A-G	19384277-A-G							**
21546186-G-T	19384300-G-T							**
21555663-C-A	19393777-C-A							**
21623787-C-A	19461901-C-A							**
21772519-C-A	19610633-C-A							**
21813857-C-A	19651971-C-A							**
21863966-C-G	19702080-C-G							**
22489461-C-A	20327575-C-A		DYZ19					**
21902697-G-T	19740811-G-T							**
21969531-A-G	19807645-A-G							**
21972346-A-T	19810460-A-T							**
22161574-C-A	19999688-C-A							**
22253143-A-G	20091257-A-G		DYZ19					**
22470732-C-A	20308846-C-A		DYZ19					**
23831288-T-A	21669402-T-A							**
24331307-G-T	22185160-G-T		P3_t1					**
21444718-A-T	19282832-A-T							**
27546760-TTGAG-T	25400613-TTGAG-T		P1_Y2					**
	56850873-G-T							**
	56849076-T-C							**
58982181-G-T	56836034-G-T							**
	56832132-C-A							**
	56828807-T-C							**
28815130-A-G	26668983-A-G							**
28732987-G-T	26586840-G-T							**
28617751-T-C	26471604-T-C							**
28588864-C-A	26442717-C-A							**
28588430-T-C	26442283-T-C							**
28481862-C-A	26335715-C-A							**
27967322-CTGTG-C	25821175-CTGTG-C		P1_Y2					**
27756506-C-A	25610359-C-A		P1_Y2					**
27637237-T-C	25491090-T-C		P1_Y2					**
26204659-T-G	24058512-T-G		P1_Y1					**
24342197-A-G	22196050-A-G		P3_t1					**
24421835-C-T	22275688-C-T							**
24381988-C-A	22235841-C-A							**
24406507-C-A	22260360-C-A							**
24406573-A-T	22260426-A-T							**
24407046-A-G	22260899-A-G							**
24409206-G-T	22263059-G-T							**
24416862-C-A	22270715-C-A							**
24523510-C-A	22377363-C-A							**
26153575-T-A	24007428-T-A		P1_Y1					**
24875620-G-T	22729473-G-T		g1					**
24878299-C-A	22732152-C-A		g1					**
24878811-A-G	22732664-A-G		g1					**
25096443-G-A	22950296-G-A		g1					**
25885709-A-G	23739562-A-G		P1_Y1					**
26101477-A-T	23955330-A-T		P1_Y1					**
21511144-C-A	19349258-C-A							**
21435488-C-A	19273602-C-A							**
17804297-C-A	15692417-C-A							**
18636735-C-A	16524855-C-A							**
19202770-A-AG	17090890-A-AG							**
19159873-C-A	17047993-C-A							**
19012402-T-A	16900522-T-A							**
19000269-G-T	16888389-G-T							**
18925351-A-G	16813471-A-G							**
18915102-T-C	16803222-T-C							**
18911033-T-G	16799153-T-G							**
18856350-C-A	16744470-C-A							**
13313093-C-A	11157417-C-A							**
18794999-A-G	16683119-A-G							**
18769535-C-A	16657655-C-A							**
18688447-G-T	16576567-G-T							**
18673780-C-A	16561900-C-A							**
18672471-T-C	16560591-T-C							**
18628081-G-T	16516201-G-T							**
19286430-C-A	17174550-C-A							**
18085291-C-A	15973411-C-A							**
17864911-C-A	15753031-C-A							**
17876240-C-A	15764360-C-A							**
17928942-C-A	15817062-C-A							**
18071494-C-A	15959614-C-A							**
18072622-C-T	15960742-C-T							**
18082906-A-T	15971026-A-T							**
18087829-C-T	15975949-C-T							**
18611526-C-A	16499646-C-A							**
18155675-G-A	16043795-G-A							**
18179523-C-A	16067643-C-A							**
18239022-C-A	16127142-C-A							**
18262502-C-G	16150622-C-G							**
18405975-G-A	16294095-G-A		P6_Gap					**
18425230-G-GT	16313350-G-GT		P6_Gap					**
19271553-A-AG	17159673-A-AG							**
19295516-C-A	17183636-C-A							**
21388647-C-T	19226761-C-T							**
21221334-C-A	19059448-C-A							**
21136831-G-A	18974945-G-A							**
21136916-T-C	18975030-T-C							**
21147889-C-A	18986003-C-A							**
21164754-C-A	19002868-C-A							**
21182526-G-A	19020640-G-A							**
21212763-A-G	19050877-A-G							**
21237812-C-A	19075926-C-A							**
21095731-C-A	18933845-C-A							**
21308380-C-A	19146494-C-A							**
21318437-C-A	19156551-C-A							**
21320031-AG-A	19158145-AG-A							**
21323799-G-T	19161913-G-T							**
21353376-C-A	19191490-C-A							**
21380631-C-A	19218745-C-A							**
21104514-C-A	18942628-C-A							**
21088714-T-A	18926828-T-A							**
19318313-C-A	17206433-C-A							**
19482257-T-C	17370377-T-C							**
19376255-G-A	17264375-G-A							**
19376278-C-A	17264398-C-A							**
19399771-C-A	17287891-C-A							**
19414922-C-A	17303042-C-A							**
19439618-C-A	17327738-C-A	Y104732						**
19448523-C-A	17336643-C-A							**
19517792-G-T	17405912-G-T							**
20326087-A-T	18164201-A-T		P5_Dst					**
19537953-G-A	17426073-G-A							**
19609385-G-C	17497505-G-C		P5_Prx					**
19675461-T-C	17563581-T-C		P5_Prx					**
19706669-C-T	17594789-C-T		P5_Prx					**
19721355-AT-A	17609475-AT-A		P5_Prx					**
19770244-A-T	17658364-A-T		P5_Prx					**
13483229-C-T	11327553-C-T							**
13329247-T-A	11173571-T-A							**
	56887108-C-A							**
4094685-T-G	4226644-T-G							**
5172151-C-A	5304110-C-A							**
5172124-C-A	5304083-C-A							**
5085787-A-G	5217746-A-G							**
5084368-T-C	5216327-T-C							**
4949181-G-GT	5081140-G-GT					12×T		**
4874341-C-T	5006300-C-T							**
4700436-C-A	4832395-C-A							**
4479939-T-C	4611898-T-C							**
4443895-C-A	4575854-C-A							**
4399057-C-A	4531016-C-A							**
4239658-G-T	4371617-G-T							**
4229924-C-A	4361883-C-A							**
4178963-G-T	4310922-G-T							**
4070702-A-C	4202661-A-C							**
5185498-C-A	5317457-C-A							**
4049840-C-A	4181799-C-A							**
3833972-C-A	3965931-C-A							**
3804556-C-A	3936515-C-A							**
3640393-C-A	3772352-C-A							**
3590184-G-T	3722143-G-T							**
3507730-G-A	3639689-G-A							**
3418684-C-G	3550643-C-G							**
3328843-C-A	3460802-C-A							**
3194367-A-T	3326326-A-T							**
3012465-G-T	3144424-G-T							**
3006904-G-T	3138863-G-T							**
2948418-A-T	3080377-A-T							**
2895046-C-A	3027005-C-A							**
2852510-C-A	2984469-C-A							**
5180560-A-T	5312519-A-T							**
5204620-T-A	5336579-T-A							**
2806188-C-T	2938147-C-T							**
6012849-T-A	6144808-T-A							**
7061777-A-T	7193736-A-T							**
7030454-A-G	7162413-A-G							**
7029922-G-GGAGA	7161881-G-GGAGA					10×GA		**
6959824-C-A	7091783-C-A							**
6948344-A-T	7080303-A-T							**
6905517-T-C	7037476-T-C							**
6882442-C-A	7014401-C-A							**
6647940-C-A	6779899-C-A							**
6516853-C-A	6648812-C-A							**
6437534-C-A	6569493-C-A							**
6381807-G-T	6513766-G-T							**
6268755-G-A	6400714-G-A		IR3_Dst					**
6245781-C-A	6377740-C-A		IR3_Dst					**
6040198-T-C	6172157-T-C							**
5967643-G-A	6099602-G-A							**
5247624-C-G	5379583-C-G							**
5962422-C-A	6094381-C-A							**
5936682-G-T	6068641-G-T							**
5911820-G-A	6043779-G-A							**
5800220-A-G	5932179-A-G							**
5793755-G-T	5925714-G-T							**
5771763-C-G	5903722-C-G							**
5755227-C-A	5887186-C-A							**
5688357-A-G	5820316-A-G							**
5562487-C-A	5694446-C-A							**
5522293-G-T	5654252-G-T							**
5522180-ACCAG-A	5654139-ACCAG-A							**
5446940-C-A	5578899-C-A							**
5367729-A-C	5499688-A-C							**
5335464-C-A	5467423-C-A							**
2842951-C-T	2974910-C-T							**
2805388-G-A	2937347-G-A							**
7125067-GT-G	7257026-GT-G							**
	56850912-G-T							**
	10744864-C-A							**
7142760-C-A	7274719-C-A							**
	10988443-C-T							**
15399440-C-A	13287560-C-A							**
3550568-A-C	3682527-A-C							**
6356284-C-A	6488243-C-A							**
5022000-G-A	5153959-G-A							**
20840248-C-A	18678362-C-A		P4_Gap					**
15209257-C-A	13097343-C-A							**
18867266-C-A	16755386-C-A							**
6791734-A-C	6923693-A-C							**
	10972648-C-T							**
22277837-T-C	20115951-T-C		DYZ19					**
14033895-C-A	11913189-C-A							**
15049432-C-A	12937523-C-A							**
18924972-C-A	16813092-C-A							**
22467684-G-A	20305798-G-A	BY15703	DYZ19				**
22467682-A-G	20305796-A-G		DYZ19				**
15604668-C-A	13492788-C-A						**	**
15410598-C-A	13298718-C-A							**
14512963-C-A	12401168-C-A							**
13868658-T-A	11747952-T-A							**
6268765-T-A	6400724-T-A		IR3_Dst					**
16172237-G-C	14060357-G-C	CTS5265					**	**
3112253-C-T	3244212-C-T							**
19537901-C-A	17426021-C-A					17×A		**
13602280-G-A	11446604-G-A							**
14635720-C-A	12523789-C-A						**
6268767-C-A	6400726-C-A		IR3_Dst			16×A		**
27872567-G-A	25726420-G-A		P1_Y2					**
2775381-C-A	2907340-C-A							**
2785950-A-G	2917909-A-G							**
27872565-G-A	25726418-G-A		P1_Y2					**
2746044-C-T	2878003-C-T	FGC24108						**
2690812-TAG-T	2822771-TAG-T							**
15712041-C-A	13600161-C-A							**
15712052-C-A	13600172-C-A							**
3606329-C-A	3738288-C-A							**
22864502-A-G	20702616-A-G							**
23476336-G-A	21314450-G-A							**
4371929-C-A	4503888-C-A							**
5868203-C-A	6000162-C-A							**
22979325-C-A	20817439-C-A							**
8119312-C-A	8251271-C-A							**
	10987276-A-T							**
	10987244-T-TACA							**
7152977-C-A	7284936-C-A							**
15764268-C-A	13652388-C-A							**
15198636-C-A	13086722-C-A							**
24013847-CTATATATATATATATATATATATATA-C	21867700-CTATATATATATATATATATATATATA-C					21×TA		**
18928831-C-A	16816951-C-A							**
21308876-C-A	19146990-C-A							**
28623225-C-A	26477078-C-A							**
9810942-C-A	9973333-C-A							**
16920101-T-G	14808221-T-G							**
17038319-C-T	14926439-C-T					13×T		**
17158997-GAC-G	15047117-GAC-G							**
22703594-TCAA-T	20541708-TCAA-T							**
14376256-C-A	12255552-C-A							**
16831045-C-A	14719165-C-A							**
15424344-A-G	13312464-A-G							**
	10893797-C-A							**
	10987242-CTTT-C							**
7080160-C-A	7212119-C-A							**
5793571-G-T	5925530-G-T							**
7131391-C-A	7263350-C-A							**
8812621-G-T	8944580-G-T							**
7134696-C-A	7266655-C-A							**
9810939-T-A	9973330-T-A	Y31732						**
9735714-A-T	9898105-A-T		IR3_Prx					**
9538052-G-C	9700443-G-C		IR3_Prx					**
	11031535-C-A							**
9519248-C-A	9681639-C-A							**
9465318-C-A	9627709-C-A							**
9424615-GG-A	9587006-GG-A							**
9094627-C-A	9257018-C-A							**
8968487-G-T	9130878-G-T							**
	9124288-G-T							**
8746347-C-A	8878306-C-A							**
9859159-C-A	10021550-C-A							**
8734402-A-G	8866361-A-G							**
8689488-C-A	8821447-C-A							**
8481472-A-G	8613431-A-G							**
8261148-G-A	8393107-G-A							**
8218250-C-A	8350209-C-A							**
8218222-C-A	8350181-C-A							**
8159512-T-A	8291471-T-A							**
8135651-T-A	8267610-T-A							**
8076148-C-A	8208107-C-A							**
8073485-C-G	8205444-C-G							**
8052602-G-A	8184561-G-A							**
9810943-T-C	9973334-T-C							**
	11014524-C-CTCCATTGAAT							**
8008809-A-T	8140768-A-T							**
	10693233-C-A							**
	10872012-T-A							**
	10862064-C-A							**
	10858715-G-T							**
	10821956-C-G							**
	10821942-C-CGGAAG							**
	10769791-C-T							**
	10880175-T-G							**
	10880219-T-C							**
	10746927-C-G							**
	10746920-T-TGACAA							**
	10880703-C-A							**
	10685865-G-T							**
	10996468-C-A							**
	10664632-CTCCAT-C							**
	10662176-G-A							**
	10893801-C-A							**
	10654456-C-T							**
	10626443-C-A							**
	10914807-T-A							**
	10940500-C-A							**
10051307-T-C	10213698-T-C							**
9960036-T-C	10122427-T-C							**
9952176-C-A	10114567-C-A							**
	10943869-C-A							**
8014977-A-G	8146936-A-G							**
8129944-T-A	8261903-T-A							**
7991069-C-A	8123028-C-A							**
7281692-C-A	7413651-C-A							**
7409815-C-A	7541774-C-A							**
7401068-C-T	7533027-C-T	MF3027						**
7400290-G-T	7532249-G-T							**
7396445-C-A	7528404-C-A							**
7390748-C-A	7522707-C-A							**
7342056-G-T	7474015-G-T							**
7316662-A-T	7448621-A-T							**
7285581-A-C	7417540-A-C							**
13224207-G-A	11068531-G-A							**
7282784-C-A	7414743-C-A							**
7275003-C-A	7406962-C-A							**
13216449-C-A	11060773-C-A							**
7258957-A-G	7390916-A-G							**
7248700-C-A	7380659-C-A							**
7201992-T-A	7333951-T-A							**
7201983-T-A	7333942-T-A							**
13235032-C-A	11079356-C-A							**
7185680-C-A	7317639-C-A							**
7172675-C-A	7304634-C-A							**
7163162-C-A	7295121-C-A							**
7153843-C-A	7285802-C-A							**
7136880-A-G	7268839-A-G							**
7418352-A-G	7550311-A-G							**
	10871125-T-C							**
7418361-G-C	7550320-G-C							**
7927919-C-A	8059878-C-A							**
7592377-C-A	7724336-C-A							**
7469837-C-A	7601796-C-A		IR1_L					**
7469809-C-A	7601768-C-A		IR1_L					**
13213621-C-A	11057945-C-A							**
7462641-C-A	7594600-C-A		IR1_L					**
13453892-C-A	11298216-C-A							***
22343744-C-T	20181858-C-T		DYZ19				***
2752707-C-A	2884666-C-A							***
16692050-T-A	14580170-T-A							***
13481043-C-A	11325367-C-A							***
28777991-C-A	26631844-C-A							***
28780405-C-A	26634258-C-A							***
24166837-T-C	22020690-T-C		P3_b1				***
24219437-G-T	22073290-G-T		P3_b1				***
22815525-T-TA	20653639-T-TA						***
13453891-T-A	11298215-T-A							***
24108202-G-A	21962055-G-A		P3_b1				***
13453660-TTCCATTCCATTCCAT-T,TTCCATTCCATTCAAG	11297984-TTCCATTCCATTCCAT-T,TTCCATTCCATTCAAG							***
	10875826-C-A							***
	56834813-T-C							***
13453029-C-A	11297353-C-A							***
13448848-C-A	11293172-C-A							***
13254442-C-A	11098766-C-A							***
13512479-AT-A	11356803-AT-A							***
22768335-C-A	20606449-C-A							***
24770305-G-T	22624158-G-T		P3_b2				***
25099740-C-T	22953593-C-T		g1				***
5785641-T-A	5917600-T-A							***
25189696-G-A	23043549-G-A		g1				***
24050338-G-T	21904191-G-T		P3_b1					***
22248638-T-G	20086752-T-G		DYZ19				***
13202747-C-A	11047071-C-A							***
22262036-A-C	20100150-A-C		DYZ19				***
25829121-G-T	23682974-G-T		P1_b3				***
13194629-C-A	11038953-C-A							***
23503790-C-A	21341904-C-A							***
25356709-C-T	23210562-C-T		P2_r2				***
13469864-C-A	11314188-C-A							***
13467764-C-A	11312088-C-A							***
22303350-C-T	20141464-C-T		DYZ19				***
24972344-C-T	22826197-C-T		g1				***
22469405-C-G	20307519-C-G		DYZ19				***
13450639-T-A	11294963-T-A							***
24770480-C-T	22624333-C-T		P3_b2				***
28514005-C-A	26367858-C-A							***
22972892-G-A	20811006-G-A							***
22277527-C-A	20115641-C-A		DYZ19				***
25115069-G-A	22968922-G-A		g1				***
22283616-T-G	20121730-T-G		DYZ19				***
6948191-A-T	7080150-A-T							***
24071487-G-T	21925340-G-T		P3_b1					***
23188186-G-T	21026300-G-T							***
14816087-C-A	12704158-C-A							***
13652346-C-A	11496670-C-A							***
17630902-C-A	15519022-C-A							***
8020516-C-T	8152475-C-T							***
15320721-G-AGAA	13208839-G-AGAA							***
7857001-C-A	7988960-C-A							***
7760232-G-T	7892191-G-T							***
7754319-C-A	7886278-C-A							***
7754270-C-A	7886229-C-A							***
7648988-C-A	7780947-C-A							***
7452667-G-T	7584626-G-T		IR1_L					***
17951095-A-G	15839215-A-G							***
17913519-C-A	15801639-C-A							***
17755815-A-G	15643935-A-G							***
17718537-G-A	15606657-G-A							***
13298536-C-A	11142860-C-A							***
15742077-G-A	13630197-G-A							***
18708999-C-A	16597119-C-A							***
15791599-C-T	13679719-C-T							***
17313122-C-A	15201242-C-A	BY38454						***
17313119-C-A	15201239-C-A							***
7191784-C-A	7323743-C-A							***
6795122-C-A	6927081-C-A							***
6873167-C-A	7005126-C-A							***
16077484-G-A	13965604-G-A							***
7166763-T-C	7298722-T-C							***
7046101-T-G	7178060-T-G							***
16506577-C-A	14394697-C-A							***
7075954-C-A	7207913-C-A							***
16455339-C-A	14343459-C-A							***
7076702-C-A	7208661-C-A							***
18706859-C-A	16594979-C-A					11×A		***
15012186-A-T	12900274-A-T							***
	11643723-T-TGATTCAACAC							***
18695803-C-A	16583923-C-A							***
9427698-G-T	9590089-G-T							***
22128509-CTTA-C	19966623-CTTA-C					5×TTA		***
23377709-C-A	21215823-C-A							***
4241524-C-A	4373483-C-A							***
13848263-G-A	11727557-G-A							***
13860312-T-C	11739606-T-C							***
	56835477-T-C							***
	10659188-TC-T							***
	10659182-TTCCA-T							***
	10657271-A-ATTCTG							***
21300093-GA-G	19138207-GA-G							***
21300019-G-T	19138133-G-T							***
21200816-C-A	19038930-C-A							***
9941592-T-C	10103983-T-C							***
8094439-C-A	8226398-C-A							***
9874244-G-T	10036635-G-T							***
20839647-T-C	18677761-T-C		P4_Gap					***
20640239-G-T	18478353-G-T		P4_Prx					***
14494599-C-T	12382796-C-T							***
9420475-C-A	9582866-C-A							***
14527348-C-A	12415549-C-A							***
19477471-A-T	17365591-A-T							***
2861524-G-T	2993483-G-T							***
14591755-C-A	12479955-C-A							***
19312152-C-A	17200272-C-A							***
3267555-C-A	3399514-C-A							***
14806127-C-A	12694198-C-A							***
18972987-C-A	16861107-C-A							***
8095522-T-A	8227481-T-A							***
13310205-C-A	11154529-C-A							***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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Gabion

Tree Position

Unique Mutations