Tree Position

R-P312/S116 > Z40481 > FGC84729 > DF99/S11987 > Z29643 > FGC16982 > S23540 > FGC16979 > FGC16997 > BY15473 > BY15478 > BY15479

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
325133
BigY2
325133
14435413-C-G 12314686-C-G Y***A*
28816780-T-A 26670633-T-A A*
15065586-C-T 12953678-C-T BY99533 YY++
22808264-C-T 20646378-C-T BY140915 YY++
13858573-T-A 11737867-T-A DYZ17 **
14582105-C-A 12470305-C-A M1827 **
22258178-C-T 20096292-C-T DYZ19 **
24283294-G-A 22137147-G-A P3_t1 **
22815505-G-T 20653619-G-T 20×T**
24283305-T-A 22137158-T-A P3_t1 **
24283299-G-A 22137152-G-A P3_t1 **
14484961-G-T 12364230-G-T **
9793445-A-AT 9955836-A-AT 10×T**
16016872-C-A 13904992-C-A **
10959744-A-C FT438260 **
10971897-TATTCC-T **
28521114-C-A 26374967-C-A **
19362624-C-A 17250744-C-A **
3706691-C-A 3838650-C-A **
20332031-G-A 18170145-G-A P5_Dst **
17092594-C-A 14980714-C-A **
7263666-C-A 7395625-C-A **
23555899-C-A 21394013-C-A **
18155618-C-A 16043738-C-A **
10861053-C-A **
17950763-C-A 15838883-C-A **
28635926-C-A 26489779-C-A **
7636008-T-A 7767967-T-A **
10023767-C-A 10186158-C-A **
10974816-G-C **
11028101-G-A **
7828981-C-A 7960940-C-A **
15743840-C-A 13631960-C-A **
23258417-C-A 21096531-C-A **
11028114-C-A **
11028151-A-AC **
11028154-C-CAAAT **
21082189-C-A 18920303-C-A **
13856326-T-TCAAAG 11735620-T-TCAAAG DYZ17 **
13856338-G-T 11735632-G-T DYZ17 **
10748177-T-G **
6666378-C-A 6798337-C-A **
22598280-C-A 20436394-C-A **
10959727-A-T **
10744453-A-C **
22205682-C-A 20043796-C-A **
28612196-C-A 26466049-C-A **
17781594-C-A 15669714-C-A **
7132840-T-A 7264799-T-A **
24458704-G-A 22312557-G-A **
15262428-C-A 13150512-C-A **
17755376-C-A 15643496-C-A **
3345880-C-A 3477839-C-A **
17302065-T-A 15190185-T-A **
9385072-C-A 9547463-C-A **
7167622-C-A 7299581-C-A **
5956899-C-A 6088858-C-A **
8501547-C-A 8633506-C-A **
21550069-C-A 19388183-C-A **
7257980-G-A 7389939-G-A **
8052007-C-A 8183966-C-A **
28700357-C-A 26554210-C-A **
18263846-G-A 16151966-G-A **
13858540-G-T 11737834-G-T DYZ17 **
26275950-C-T 24129803-C-T P1_Y1 **
22896116-A-C 20734230-A-C **
24472458-T-C 22326311-T-C **
9231576-G-A 9393967-G-A **
18714096-C-A 16602216-C-A **
56850940-A-T **
56850949-C-G **
23037232-A-T 20875346-A-T **
23037236-G-T 20875350-G-T **
23434510-C-A 21272624-C-A **
15217468-C-A 13105554-C-A **
6869574-G-C 7001533-G-C **
5200587-G-T 5332546-G-T **
6791222-C-A 6923181-C-A **
16962699-C-T 14850819-C-T **
10808478-G-C **
10808497-G-T **
10808499-G-T **
10808506-G-T **
10808515-C-T **
10808526-C-G **
10808534-C-G **
10808546-C-A **
10808552-A-T **
10808562-A-T **
10808566-C-CAT **
2773714-T-A 2905673-T-A **
10651605-T-C **
10651628-G-C **
10651632-T-C **
10651646-G-T **
17517126-C-A 15405246-C-A **
7608520-C-A 7740479-C-A **
22258355-C-A 20096469-C-A DYZ19 **
16665766-A-G 14553886-A-G **
2892568-A-G 3024527-A-G **
17580888-C-T 15469008-C-T **
27714369-A-C 25568222-A-C P1_Y2 **
16623654-G-T 14511774-G-T **
10685316-C-A **
8013364-C-A 8145323-C-A **
15338789-C-A 13226907-C-A **
7635975-T-C 7767934-T-C BY35177BY35178 Y134399 **
9056935-C-A **
10887190-C-A FT435574 **
6330102-A-C 6462061-A-C IR3_Dst **
10745765-A-C **
23360558-C-A 21198672-C-A FT220723 **
10805277-G-T **
11004392-T-C **
21220273-G-C 19058387-G-C **
15280312-C-A 13168411-C-A **
14743928-C-A 12631997-C-A **
18539107-A-C 16427227-A-C **
14566688-T-C 12454888-T-C **
15712015-C-A 13600135-C-A **
24611993-A-AT 22465846-A-AT P3_t2 **
13858532-A-G 11737826-A-G DYZ17 **
13858552-A-T 11737846-A-T DYZ17 **
13858557-A-G 11737851-A-G DYZ17 **
10926748-C-A **
19337404-C-A 17225524-C-A **
13326227-C-A 11170551-C-A **
28499975-C-A 26353828-C-A **
27762780-CA-C 25616633-CA-C P1_Y2 **
13858519-G-A 11737813-G-A DYZ17 **
18803997-C-A 16692117-C-A **
18384482-G-A 16272602-G-A BY121517 P6_Gap **
7313043-C-A 7445002-C-A **
14981705-C-A 12869781-C-A **
10940751-C-A **
10807387-G-T **
8043153-T-C 8175112-T-C **
21677515-C-A 19515629-C-A **
7617689-C-A 7749648-C-A **
18328686-G-T 16216806-G-T P6_Prx **
17330286-C-A 15218406-C-A **
10059509-C-A 10221900-C-A **
6666446-C-A 6798405-C-A **
22815498-C-T 20653612-C-T **
17028811-C-A 14916931-C-A **
6459909-C-A 6591868-C-A FT71762 **
10979657-G-T **
14300698-C-A 12179992-C-A **
10900550-C-A **
6926247-C-A 7058206-C-A **
10661401-C-A **
10778276-C-T **
17933997-C-A 15822117-C-A **
6736357-C-A 6868316-C-A **
9377965-C-T 9540356-C-T **
22598277-G-A 20436391-G-A **
7425269-C-A 7557228-C-A **
16486623-C-A 14374743-C-A **
16464465-C-A 14352585-C-A **
28478846-C-A 26332699-C-A **
16904706-T-A 14792826-T-A **
21493035-G-A 19331149-G-A FT381276 **
7063852-C-G 7195811-C-G **
23397188-C-A 21235302-C-A FTA13452 **
14442992-C-A 12322265-C-A **
19706174-C-A 17594294-C-A P5_Prx **
13856356-T-G 11735650-T-G DYZ17 **
15478808-C-A 13366928-C-A **
7257860-C-A 7389819-C-A **
15220928-C-A 13109014-C-A **
22774688-C-A 20612802-C-A **
22228091-T-C 20066205-T-C DYZ19 **
18793570-G-T 16681690-G-T **
9516767-AG-A 9679158-AG-A **
16104188-G-C 13992308-G-C P8_Prx **
15686870-A-G 13574990-A-G **
8776750-C-A 8908709-C-A **
24371788-C-A 22225641-C-A **
20230154-A-AC 18068268-A-AC P5_Dst **
10850098-G-T **
17716591-C-A 15604711-C-A **
9991803-C-A 10154194-C-A **
10651649-T-C **
10778279-T-C **
24244621-GT-G 22098474-GT-G P3_b1 **
10796945-T-A **
19476777-C-A 17364897-C-A **
23343645-C-A 21181759-C-A **
13236260-T-A 11080584-T-A **
23037225-A-T 20875339-A-T **
28613068-C-A 26466921-C-A **
7871467-AT-A 8003426-AT-A **
14803044-C-A 12691115-C-A **
23045918-C-A 20884032-C-A **
6979793-C-A 7111752-C-A **
7534528-A-T 7666487-A-T **
15280185-C-A 13168284-C-A **
4769527-C-A 4901486-C-A **
10956802-TCCA-T **
14540829-G-T 12429030-G-T **
5359622-G-T 5491581-G-T **
26073037-G-T 23926890-G-T P1_Y1 **
26275953-C-T 24129806-C-T P1_Y1 16×T**
15358753-T-C 13246872-T-C **
18636728-A-G 16524848-A-G **
7437604-C-G 7569563-C-G **
16926932-C-A 14815052-C-A **
10778336-T-C **
7100753-C-A 7232712-C-A **
10804725-G-A **
17713946-C-A 15602066-C-A **
10744438-G-GCACTC **
2888866-G-T 3020825-G-T **
2690600-C-A 2822559-C-A **
2730109-T-G 2862068-T-G **
2753801-C-A 2885760-C-A **
2762721-TA-T 2894680-TA-T **
2767973-C-G 2899932-C-G **
2778517-A-T 2910476-A-T **
2799486-C-A 2931445-C-A **
2810390-GAGA-G 2942349-GAGA-G **
2810399-C-G 2942358-C-G **
2842469-G-A 2974428-G-A FT165324 **
2842469-G-GC 2974428-G-GC **
2852869-C-A 2984828-C-A **
2865866-C-A 2997825-C-A **
2902215-G-C 3034174-G-C **
3012737-TAC-T 3144696-TAC-T **
3123041-C-A 3255000-C-A **
3218049-A-G 3350008-A-G **
3218068-T-C 3350027-T-C **
3272011-C-G 3403970-C-G **
3274201-C-A 3406160-C-A **
3291815-G-T 3423774-G-T **
3334612-G-T 3466571-G-T **
3343721-C-A 3475680-C-A **
3463375-G-T 3595334-G-T **
3659188-G-T 3791147-G-T **
3688651-A-C 3820610-A-C **
3726322-C-T 3858281-C-T **
3815324-A-G 3947283-A-G **
3834878-T-G 3966837-T-G **
3834921-TC-T 3966880-TC-T **
3990639-C-G 4122598-C-G FT319159 **
3991785-A-T 4123744-A-T **
3991863-T-A 4123822-T-A **
4012698-C-A 4144657-C-A **
4069549-T-G 4201508-T-G **
4142420-T-A 4274379-T-A **
4262333-A-G 4394292-A-G **
4372422-C-A 4504381-C-A **
4408728-A-G 4540687-A-G **
4581719-G-T 4713678-G-T **
4652716-G-T 4784675-G-T **
4780423-C-A 4912382-C-A **
5107468-G-A 5239427-G-A **
5204580-G-A 5336539-G-A **
5242428-C-A 5374387-C-A **
5313665-G-C 5445624-G-C **
5409846-A-G 5541805-A-G **
5650663-T-A 5782622-T-A **
5800203-A-T 5932162-A-T **
5818014-C-A 5949973-C-A **
6228201-A-ATG 6360160-A-ATG IR3_Dst **
6231174-G-C 6363133-G-C IR3_Dst **
6295927-C-A 6427886-C-A IR3_Dst **
6330105-T-A 6462064-T-A IR3_Dst **
6330116-A-AT 6462075-A-AT IR3_Dst **
6389887-C-A 6521846-C-A **
6457916-A-G 6589875-A-G **
6461074-A-G 6593033-A-G **
6644967-T-A 6776926-T-A **
6693014-T-C 6824973-T-C **
6748090-T-C 6880049-T-C **
6769793-C-G 6901752-C-G **
6769797-A-C 6901756-A-C **
6775875-C-T 6907834-C-T **
6776493-T-A 6908452-T-A **
6799095-G-T 6931054-G-T **
6805445-C-A 6937404-C-A **
6805455-T-G 6937414-T-G **
6835592-A-C 6967551-A-C **
6862176-A-G 6994135-A-G **
6869568-G-A 7001527-G-A **
6869590-G-A 7001549-G-A **
6915819-GAGA-G 7047778-GAGA-G **
6925703-C-A 7057662-C-A **
6976612-C-A 7108571-C-A **
6979798-G-A 7111757-G-A **
6988463-G-A 7120422-G-A **
6996559-G-T 7128518-G-T **
7028773-C-A 7160732-C-A **
7029995-A-G 7161954-A-G **
7050365-T-A 7182324-T-A **
7101070-G-T 7233029-G-T **
7103494-C-A 7235453-C-A **
7111011-A-G 7242970-A-G **
7126561-A-C 7258520-A-C **
7126562-C-T 7258521-C-T **
7146168-G-A 7278127-G-A **
7172443-G-A 7304402-G-A **
7183169-C-A 7315128-C-A **
7187770-G-T 7319729-G-T **
7207385-TAA-T 7339344-TAA-T **
7211287-C-A 7343246-C-A **
7256138-A-T 7388097-A-T **
7257935-A-G 7389894-A-G **
7270312-C-G 7402271-C-G **
7282547-T-C 7414506-T-C **
7286744-T-C 7418703-T-C **
7294374-C-A 7426333-C-A **
7298330-G-T 7430289-G-T **
7299834-G-T 7431793-G-T **
7336871-C-A 7468830-C-A **
7436055-C-T 7568014-C-T **
7437598-A-G 7569557-A-G **
7437606-G-A 7569565-G-A **
7468089-A-T 7600048-A-T IR1_L **
7468090-C-A 7600049-C-A IR1_L **
7534508-G-A 7666467-G-A **
7536453-G-T 7668412-G-T **
7543809-A-T 7675768-A-T **
7579924-G-A 7711883-G-A **
7580085-G-C 7712044-G-C **
7580092-T-C 7712051-T-C **
7582044-T-C 7714003-T-C **
7635995-G-A 7767954-G-A **
7649300-T-A 7781259-T-A **
7663574-C-A 7795533-C-A **
7670706-C-A 7802665-C-A **
7820944-C-A 7952903-C-A **
7822025-C-A 7953984-C-A **
7824677-C-G 7956636-C-G **
7867074-A-C 7999033-A-C **
7868072-CA-C 8000031-CA-C **
7869266-C-A 8001225-C-A **
8074891-G-T 8206850-G-T **
8125032-G-GAAAC 8256991-G-GAAAC **
8213615-G-A 8345574-G-A **
8232021-C-A 8363980-C-A **
8238191-G-T 8370150-G-T **
8563740-A-G 8695699-A-G **
8563744-GC-G 8695703-GC-G **
8689335-C-A 8821294-C-A **
8705966-A-T 8837925-A-T **
8746475-T-C 8878434-T-C **
8806910-C-A 8938869-C-A **
8832169-C-A 8964128-C-A **
9075274-C-A 9237665-C-A **
9184216-C-A 9346607-C-A **
9446068-G-T 9608459-G-T **
9457125-C-A 9619516-C-A **
9516787-A-C 9679178-A-C **
9517400-T-C 9679791-T-C **
9624866-A-T 9787257-A-T IR3_Prx **
9742608-C-A 9904999-C-A IR3_Prx **
9742609-A-T 9905000-A-T IR3_Prx **
9822854-T-C 9985245-T-C **
9847442-G-T 10009833-G-T **
9877122-T-G 10039513-T-G **
9891179-C-A 10053570-C-A **
10022975-C-A 10185366-C-A **
10651596-T-C **
10655885-A-G **
10661408-C-A **
10661413-T-G **
10665822-G-T **
10666936-C-CTCCAT **
10677167-C-CACACT **
10679232-C-T **
10683048-CATTCG-C **
10684099-C-A **
10687105-T-A **
10754856-C-A **
10755447-C-A **
10766720-T-A **
10768092-A-ACTCCG **
10773379-T-C **
10774759-C-A **
10777244-T-C **
10778216-G-T **
10778234-TC-T **
10778238-C-G **
10778238-C-CTA **
10778240-CA-C **
10778297-C-T **
10778326-C-A **
10781633-C-T **
10783938-G-A **
10800828-T-G **
10804732-CA-C **
10804737-A-AT **
10804751-T-A **
10804752-C-T **
10804785-C-CATTGT **
10804796-A-ACTGAAC **
10804797-T-TCCAC **
10822041-G-C **
10822056-G-C **
10826857-A-C **
10835648-A-T **
10835651-C-A **
10835661-C-A **
10840581-G-T **
10848412-C-A **
10869360-C-A **
10870283-G-T **
10873669-A-T **
10881643-T-C **
10888061-T-C **
10888447-A-G **
10890343-C-A **
10890412-A-C **
10898958-T-C **
10919649-G-T **
10921176-C-T **
10922109-A-G **
10930333-C-A **
10931150-C-A **
10932511-A-C **
10940912-A-G **
10941205-C-G **
10941760-T-G **
10945590-G-T **
10947889-T-A **
10955438-C-A **
10959705-T-C **
10981740-C-T **
10982425-C-A **
11014049-G-A **
11017441-T-A **
11020739-C-T **
11027207-A-G **
11028097-G-CCATAT **
11028199-C-T **
11037960-C-T **
11037964-A-T **
13212849-C-A 11057173-C-A **
13236252-G-A 11080576-G-A **
13236256-T-C 11080580-T-C **
13236268-CAAA-C 11080592-CAAA-C 8×A**
13313977-C-A 11158301-C-A **
13463892-A-T 11308216-A-T **
13484541-G-T 11328865-G-T **
13491112-T-G 11335436-T-G **
13491136-G-A 11335460-G-A **
13493385-A-G 11337709-A-G **
13602703-ACCATGCTTC-A 11447027-ACCATGCTTC-A **
13617936-C-A 11462260-C-A FT70169 **
13643921-C-A 11488245-C-A **
11659394-C-A DYZ17 **
11671518-A-C DYZ17 **
13840609-T-A 11719903-T-A DYZ17 **
13881229-C-A 11760523-C-A **
13900220-C-A 11779514-C-A **
13909295-A-C 11788589-A-C **
13909379-G-T 11788673-G-T **
13919560-T-C 11798854-T-C **
13941501-A-C 11820795-A-C **
13952651-T-C 11831945-T-C **
14000529-C-A 11879823-C-A **
14066908-T-C 11946202-T-C **
14069050-C-T 11948344-C-T **
14136247-G-C 12015541-G-C **
14171840-T-C 12051134-T-C **
14200452-C-A 12079746-C-A **
14214315-T-C 12093609-T-C **
14216485-A-G 12095779-A-G **
14222784-A-T 12102078-A-T **
14238495-A-G 12117789-A-G **
14245230-A-T 12124524-A-T **
14246784-G-T 12126078-G-T **
14250139-G-T 12129433-G-T **
14251742-A-G 12131036-A-G **
14272888-T-A 12152182-T-A **
14283389-A-T 12162683-A-T **
14286206-C-A 12165500-C-A **
14295296-T-A 12174590-T-A **
14299786-C-G 12179080-C-G **
14322828-C-A 12202122-C-A **
14328067-C-T 12207361-C-T **
14353792-C-T 12233087-C-T **
14357700-TG-T 12236995-TG-T **
14379109-A-G 12258405-A-G **
14379367-C-T 12258663-C-T **
14383518-A-G 12262814-A-G **
14389870-A-G 12269166-A-G **
14400224-T-C 12279521-T-C **
14402084-C-A 12281381-C-A **
14449602-A-G 12328875-A-G **
14449609-C-A 12328882-C-A **
14449624-T-C 12328897-T-C **
14450529-G-C 12329802-G-C **
14452198-G-T 12331471-G-T **
14457249-G-C 12336522-G-C **
14465469-C-A 12344742-C-A **
14465522-A-G 12344795-A-G **
14465534-A-G 12344807-A-G **
14465538-C-T 12344811-C-T **
14465539-A-G 12344812-A-G **
14471966-A-T 12351235-A-T **
14527028-G-A 12415229-G-A **
14538649-G-C 12426850-G-C **
14544101-C-A 12432302-C-A **
14566686-C-T 12454886-C-T **
14566687-A-G 12454887-A-G **
14609610-G-T 12497812-G-T **
14611766-C-A 12499972-C-A **
14623482-T-G 12511680-T-G **
14645058-T-G 12533127-T-G **
14743990-C-A 12632059-C-A **
14745118-C-A 12633187-C-A **
14753800-C-A 12641869-C-A **
14769340-C-A 12657409-C-A **
14771703-A-T 12659772-A-T **
14785741-C-A 12673811-C-A **
14789405-G-T 12677476-G-T **
14789506-G-A 12677577-G-A **
14825977-C-A 12714044-C-A **
14831787-T-A 12719854-T-A **
14849033-C-T 12737099-C-T **
14849034-A-G 12737100-A-G **
14885561-C-A 12773627-C-A **
14909686-T-C 12797753-T-C **
14926504-T-C 12814569-T-C **
15049467-T-G 12937558-T-G **
15092295-C-A 12980384-C-A **
15161318-G-A 13049404-G-A Z27081 **
15169228-T-A 13057314-T-A **
15169401-G-T 13057487-G-T **
15170990-A-C 13059076-A-C **
15172074-C-T 13060160-C-T **
15172080-T-C 13060166-T-C **
15201722-A-G 13089808-A-G **
15203236-C-A 13091322-C-A **
15206009-C-T 13094095-C-T **
15209527-A-G 13097613-A-G **
15218517-C-A 13106603-C-A **
15259168-C-T 13147252-C-T **
15305788-C-T 13193887-C-T **
15320781-G-T 13208899-G-T **
15342076-C-G 13230195-C-G **
15367070-A-G 13255190-A-G **
15401415-C-A 13289535-C-A **
15405360-A-G 13293480-A-G **
15410612-C-T 13298732-C-T F19771 **
15468184-T-G 13356304-T-G **
15546073-T-C 13434193-T-C **
15655644-C-A 13543764-C-A **
15657992-A-G 13546112-A-G **
15743586-A-T 13631706-A-T **
15871754-C-T 13759874-C-T **
15957739-A-T 13845859-A-T **
15976499-TTATTTAATATTTCCA-T 13864619-TTATTTAATATTTCCA-T **
15987279-C-T 13875399-C-T **
15991803-T-G 13879923-T-G **
16017819-C-A 13905939-C-A **
16176562-C-A 14064682-C-A **
16223544-C-A 14111664-C-A **
16244363-C-A 14132483-C-A **
16279011-T-A 14167131-T-A **
16279029-G-A 14167149-G-A **
16340173-A-G 14228293-A-G **
16422797-C-A 14310917-C-A **
16441084-A-C 14329204-A-C **
16467550-A-C 14355670-A-C **
16467560-G-C 14355680-G-C **
16503693-T-A 14391813-T-A **
16528918-A-T 14417038-A-T **
16603858-C-T 14491978-C-T **
16629272-G-A 14517392-G-A **
16667848-C-A 14555968-C-A **
16668191-C-A 14556311-C-A **
16700179-A-G 14588299-A-G **
16701604-A-T 14589724-A-T **
16705430-A-C 14593550-A-C **
16707453-G-T 14595573-G-T **
16729957-C-A 14618077-C-A **
16781334-C-A 14669454-C-A **
16827379-T-C 14715499-T-C **
16867519-C-A 14755639-C-A **
16868502-C-A 14756622-C-A **
16868547-C-A 14756667-C-A **
16919998-T-C 14808118-T-C **
16931135-G-T 14819255-G-T **
16936095-CA-C 14824215-CA-C **
16943506-C-A 14831626-C-A FTB41551 **
16962783-C-A 14850903-C-A **
17013310-G-A 14901430-G-A **
17046769-C-A 14934889-C-A **
17057450-T-A 14945570-T-A **
17097561-G-T 14985681-G-T **
17129953-A-G 15018073-A-G **
17187506-C-A 15075626-C-A **
17233393-C-A 15121513-C-A **
17263295-C-A 15151415-C-A **
17280014-T-C 15168134-T-C **
17302151-G-A 15190271-G-A **
17342821-C-A 15230941-C-A **
17377174-A-C 15265294-A-C **
17380100-C-T 15268220-C-T **
17412265-C-A 15300385-C-A **
17465831-C-A 15353951-C-A **
17465868-C-A 15353988-C-A **
17491082-A-G 15379202-A-G **
17497809-C-A 15385929-C-A **
17527205-C-A 15415325-C-A FT353002 **
17580880-C-T 15469000-C-T **
17580895-C-T 15469015-C-T **
17598046-C-A 15486166-C-A **
17634484-C-A 15522604-C-A **
17675560-A-G 15563680-A-G **
17715038-T-G 15603158-T-G **
17737368-C-A 15625488-C-A FTB22055 **
17749321-T-A 15637441-T-A **
17859669-A-G 15747789-A-G **
17913612-C-G 15801732-C-G **
17915069-C-A 15803189-C-A **
17942236-G-T 15830356-G-T **
17946653-T-A 15834773-T-A **
17946654-TTAC-T 15834774-TTAC-T **
17997176-C-A 15885296-C-A P7_Gap **
18108588-G-C 15996708-G-C **
18147651-C-A 16035771-C-A **
18147655-A-G 16035775-A-G FT181381 **
18249848-C-T 16137968-C-T **
18261589-A-G 16149709-A-G **
18280240-T-A 16168360-T-A BY121370 P6_Prx **
18343775-A-C 16231895-A-C P6_Prx **
18382608-C-A 16270728-C-A P6_Gap **
18567831-A-G 16455951-A-G **
18589723-G-A 16477843-G-A **
18589807-C-A 16477927-C-A **
18668055-G-T 16556175-G-T **
18668060-C-A 16556180-C-A **
18682487-C-A 16570607-C-A **
18688237-C-T 16576357-C-T **
18704332-C-A 16592452-C-A **
18718786-C-A 16606906-C-A **
18792881-C-A 16681001-C-A **
18800911-T-C 16689031-T-C **
18814752-C-A 16702872-C-A **
18857688-A-G 16745808-A-G **
18904355-C-A 16792475-C-A **
18986022-T-C 16874142-T-C **
18996466-A-T 16884586-A-T **
19041292-A-T 16929412-A-T **
19041321-C-G 16929441-C-G **
19061364-C-A 16949484-C-A **
19223386-A-T 17111506-A-T **
19231313-TTGTTTC-T 17119433-TTGTTTC-T **
19298716-C-A 17186836-C-A **
19299793-A-T 17187913-A-T **
19362620-C-A 17250740-C-A FGC5466 **
19376256-G-T 17264376-G-T **
19391272-T-G 17279392-T-G **
19403882-T-A 17292002-T-A **
19403885-A-G 17292005-A-G **
19403897-C-G 17292017-C-G **
19403898-A-C 17292018-A-C **
19412374-G-T 17300494-G-T **
19412853-G-T 17300973-G-T **
19423149-C-A 17311269-C-A FTB34073 **
19427296-G-T 17315416-G-T **
19464169-A-T 17352289-A-T **
19476766-G-A 17364886-G-A **
19504198-C-T 17392318-C-T **
19522587-C-A 17410707-C-A **
19527893-T-G 17416013-T-G **
19564584-CAGAGGTCA-C 17452704-CAGAGGTCA-C **
19706122-C-G 17594242-C-G P5_Prx 9×CAT**
19706122-C-CCGT 17594242-C-CCGT P5_Prx 9×CAT**
20001319-C-T 17889439-C-T P5_Prx **
20101794-TG-T 17989914-TG-T P5_Dst **
20132267-A-G 18020387-A-G P5_Dst **
20230257-C-A 18068371-C-A P5_Dst **
20815956-T-C 18654070-T-C P4_Gap **
20840349-T-A 18678463-T-A P4_Gap **
21068199-T-G 18906313-T-G **
21092301-C-G 18930415-C-G **
21149574-T-C 18987688-T-C **
21153274-C-G 18991388-C-G **
21177098-TA-T 19015212-TA-T **
21220276-C-G 19058390-C-G **
21315326-C-T 19153440-C-T **
21332749-C-A 19170863-C-A **
21373690-A-G 19211804-A-G **
21388807-T-G 19226921-T-G **
21389791-C-A 19227905-C-A **
21405895-C-T 19244009-C-T **
21456713-C-T 19294827-C-T **
21522081-C-A 19360195-C-A **
21554392-T-G 19392506-T-G **
21556477-C-A 19394591-C-A **
21639032-T-A 19477146-T-A **
21732663-C-T 19570777-C-T 14×T**
21737903-G-C 19576017-G-C **
21875794-A-T 19713908-A-T **
21904583-C-A 19742697-C-A **
21975319-C-A 19813433-C-A **
21987415-C-A 19825529-C-A **
21990482-C-A 19828596-C-A **
21996386-T-C 19834500-T-C **
22028824-C-G 19866938-C-G **
22047928-C-A 19886042-C-A **
22079432-C-A 19917546-C-A **
22124515-C-G 19962629-C-G **
22215329-C-A 20053443-C-A **
22258180-A-T 20096294-A-T DYZ19 **
22522761-G-T 20360875-G-T **
22527256-C-T 20365370-C-T FT270713 **
22598293-T-A 20436407-T-A **
22611455-T-G 20449569-T-G **
22727308-T-C 20565422-T-C **
22729346-C-A 20567460-C-A **
22756053-A-T 20594167-A-T **
22756055-G-T 20594169-G-T **
22756068-T-C 20594182-T-C **
22774620-C-A 20612734-C-A **
22774900-A-G 20613014-A-G **
22819293-T-C 20657407-T-C **
22833876-AT-A 20671990-AT-A **
22864895-A-T 20703009-A-T **
22864914-A-G 20703028-A-G FT361381 **
22869785-A-G 20707899-A-G **
22914547-C-A 20752661-C-A **
22951476-C-A 20789590-C-A **
22965160-T-A 20803274-T-A **
23037230-C-T 20875344-C-T **
23047708-C-A 20885822-C-A **
23052627-C-T 20890741-C-T **
23134194-A-T 20972308-A-T **
23202974-G-C 21041088-G-C **
23202978-C-A 21041092-C-A **
23208128-C-A 21046242-C-A **
23259285-A-T 21097399-A-T **
23285106-A-T 21123220-A-T **
23293623-T-A 21131737-T-A **
23370732-C-A 21208846-C-A **
23398198-A-T 21236312-A-T **
23411933-T-A 21250047-T-A **
23436019-T-C 21274133-T-C **
23459657-T-A 21297771-T-A **
23464608-C-A 21302722-C-A **
23522574-G-T 21360688-G-T **
23741919-G-T 21580033-G-T **
23779964-C-A 21618078-C-A **
23869855-G-C 21707969-G-C **
23869886-T-G 21708000-T-G **
23983654-G-T 21837507-G-T **
24003098-ACTG-A 21856951-ACTG-A **
24381299-G-A 22235152-G-A **
24422014-AAATCT-A 22275867-AAATCT-A **
24458779-G-C 22312632-G-C **
24474950-C-A 22328803-C-A **
24503072-C-A 22356925-C-A **
24577879-A-AT 22431732-A-AT P3_t2 **
24869445-A-T 22723298-A-T IR1_R **
24883634-T-A 22737487-T-A g1 **
24883653-A-C 22737506-A-C g1 **
25872062-A-C 23725915-A-C P1_Y1 **
25937866-G-C 23791719-G-C P1_Y1 **
25955615-C-A 23809468-C-A P1_Y1 **
25996010-A-C 23849863-A-C P1_Y1 **
26055613-T-C 23909466-T-C P1_Y1 **
26344189-T-G 24198042-T-G P1_Y1 **
26478117-A-AAAGAAAGT 24331970-A-AAAGAAAGT P1_Y1 **
28429661-C-A 26283514-C-A P1_gr2 **
28503136-G-T 26356989-G-T **
28529877-A-C 26383730-A-C **
28589114-A-G 26442967-A-G **
28650131-T-C 26503984-T-C **
28657736-A-G 26511589-A-G **
28719790-C-T 26573643-C-T **
28760271-C-G 26614124-C-G **
28773686-C-A 26627539-C-A **
28775860-G-T 26629713-G-T **
28779227-T-C 26633080-T-C **
28779584-A-G 26633437-A-G **
28798207-A-G 26652060-A-G **
56834943-A-G **
56839003-A-G **
56840375-G-T **
56844737-T-G **
58981847-A-T 56835700-A-T ***
21182165-G-GA 19020279-G-GA 10×A***
13848249-C-A 11727543-C-A FT328716 DYZ17 ***
18947916-C-A 16836036-C-A ***
10016259-G-GA 10178650-G-GA ***
9983834-A-T 10146225-A-T ***
13433489-A-C,T 11277813-A-C,T ***
14143824-C-A 12023118-C-A Z42332 Y24129 ***
9983838-A-G 10146229-A-G ***
9995006-G-C 10157397-G-C ***
13820769-A-G,T 11700063-A-G,T DYZ17 ***
18957220-C-A 16845340-C-A PR2944 ***
25092899-T-C 22946752-T-C g1 ***
17950870-AT-A 15838990-AT-A ***
11672680-C-A DYZ17 ***
10687013-G-T ***
19283747-C-A 17171867-C-A ***
7363613-C-A 7495572-C-A ***
21856017-C-A 19694131-C-A ***
20065109-C-A 17953229-C-A P5_Gap ***
23997570-C-A 21851423-C-A ***
2979318-A-T 3111277-A-T ***
13474050-C-T 11318374-C-T ***
15078102-CTT-C,CT 12966192-CTT-C,CT 14×T***
19104617-G-T 16992737-G-T ***
15059692-C-A 12947784-C-A ***
7360380-C-A 7492339-C-A ***
9944155-G-T 10106546-G-T ***
7134873-T-G 7266832-T-G ***
17760347-CTTT-C,CT 15648467-CTTT-C,CT 14×T***
56839239-G-T ***
22037415-TA-T,TAA 19875529-TA-T,TAA 10×A***
21754285-G-T ***
18685369-C-A 16573489-C-A ***
10801732-C-CTCTCG ***
6345941-C-A 6477900-C-A ***
17664881-C-A 15553001-C-A ***
8217735-C-A 8349694-C-A ***
10876813-G-T ***
10995525-T-C ***
23505549-C-A 21343663-C-A ***
16180147-C-A 14068267-C-A ***
19565634-TAAA-T 17453754-TAAA-T 14×A***
16912636-C-A 14800756-C-A ***
27823801-C-A 25677654-C-A P1_Y2 ***
2690875-C-A 2822834-C-A ***
2695607-T-C 2827566-T-C ***
2842330-T-C 2974289-T-C ***
2855305-CTTT-C,CTT 2987264-CTTT-C,CTT 16×T***
2901921-C-A 3033880-C-A ***
4201234-T-C 4333193-T-C ***
5911595-C-A 6043554-C-A ***
5924254-C-A 6056213-C-A ***
6345906-C-A 6477865-C-A ***
6359626-T-G 6491585-T-G ***
6674489-A-G 6806448-A-G ***
6880259-A-T 7012218-A-T ***
6972704-C-A 7104663-C-A ***
7101660-C-A 7233619-C-A ***
7104230-C-A 7236189-C-A ***
7295727-C-A 7427686-C-A ***
7609323-A-G 7741282-A-G ***
7854597-G-T 7986556-G-T ***
8019103-C-A 8151062-C-A ***
8104751-A-G 8236710-A-G ***
8158059-A-T 8290018-A-T ***
8162573-C-A 8294532-C-A ***
8349324-A-G 8481283-A-G ***
8536175-G-T 8668134-G-T ***
8730859-G-A 8862818-G-A BY75509 ***
8993894-G-T 9156285-G-T ***
9380852-C-A 9543243-C-A ***
9465937-G-T 9628328-G-T ***
9856077-A-G 10018468-A-G ***
9874941-C-A 10037332-C-A ***
10020379-C-A 10182770-C-A ***
10029933-C-T 10192324-C-T ***
10825289-C-CCATTA ***
10888571-C-A ***
10943067-C-A ***
11004509-G-T ***
11026025-C-CTGAAT ***
11026029-A-C ***
13480884-G-A 11325208-G-A ***
11648864-C-A DYZ17 ***
11656643-GA-G DYZ17 ***
13833380-T-C 11712674-T-C DYZ17 ***
14377005-C-A 12256301-C-A ***
14392086-C-A 12271382-C-A ***
14451088-C-A 12330361-C-A ***
14548622-G-A 12436823-G-A ***
14622714-C-A 12510912-C-A ***
14745983-C-A 12634052-C-A ***
14750064-C-A 12638133-C-A ***
14766403-A-T 12654472-A-T ***
14787043-A-G 12675113-A-G ***
14799712-C-A 12687783-C-A ***
14843996-C-A 12732062-C-A ***
14939659-C-A 12827733-C-A ***
15113996-T-C 13002083-T-C FT116977 ***
15114038-C-A 13002125-C-A ***
15160765-A-G 13048851-A-G ***
15160768-C-A 13048854-C-A ***
15182914-C-G 13071000-C-G ***
15182952-C-T 13071038-C-T ***
15321482-C-A 13209600-C-A ***
15404567-C-A 13292687-C-A ***
15411416-A-C 13299536-A-C ***
15411732-T-C 13299852-T-C ***
15483894-C-A 13372014-C-A ***
15572123-C-A 13460243-C-A ***
15747111-A-G 13635231-A-G ***
15980745-T-G 13868865-T-G ***
16054361-C-A 13942481-C-A ***
16085864-T-A 13973984-T-A ***
16177416-C-A 14065536-C-A ***
16279915-C-A 14168035-C-A ***
16541252-G-A 14429372-G-A ***
16716895-A-G 14605015-A-G 9×T***
16740234-C-A 14628354-C-A ***
16888251-AT-A 14776371-AT-A ***
17285370-G-A 15173490-G-A ***
17729899-C-A 15618019-C-A ***
17811179-A-G 15699299-A-G ***
17811953-C-A 15700073-C-A ***
17869493-C-A 15757613-C-A ***
17911161-C-A 15799281-C-A ***
17911955-A-G 15800075-A-G ***
18213499-C-A 16101619-C-A MF4824 ***
18263217-G-T 16151337-G-T ***
18693625-T-C 16581745-T-C ***
19228948-T-A 17117068-T-A ***
19390893-C-A 17279013-C-A ***
19509321-C-T 17397441-C-T ***
19562715-C-A 17450835-C-A ***
21138824-C-A 18976938-C-A ***
21187170-C-A 19025284-C-A ***
21284307-C-A 19122421-C-A ***
21386211-C-A 19224325-C-A ***
21445383-C-A 19283497-C-A ***
21531608-C-A 19369722-C-A ***
21603379-C-A 19441493-C-A ***
21627280-C-A 19465394-C-A ***
21627290-C-A 19465404-C-A ***
21822535-C-A 19660649-C-A ***
21880831-C-T 19718945-C-T ***
21909518-C-T 19747632-C-T ***
21916148-A-T 19754262-A-T ***
21960400-T-A 19798514-T-A ***
21974967-C-A 19813081-C-A ***
21996338-G-T 19834452-G-T ***
22527293-C-A 20365407-C-A ***
22578532-C-A 20416646-C-A ***
22843917-T-C 20682031-T-C ***
22867928-A-C 20706042-A-C ***
22868233-C-A 20706347-C-A ***
22895787-AT-A 20733901-AT-A 10×T***
23125888-G-A 20964002-G-A ***
23125889-A-G 20964003-A-G ***
23125892-C-T 20964006-C-T ***
23274155-A-T 21112269-A-T ***
23359026-C-A 21197140-C-A ***
23429705-A-G 21267819-A-G ***
23449826-C-A 21287940-C-A ***
23493385-C-A 21331499-C-A ***
23886982-C-A 21725096-C-A ***
23954352-C-A 21808205-C-A ***
23991951-C-A 21845804-C-A ***
27883499-C-A 25737352-C-A P1_Y2 ***
28589650-G-A 26443503-G-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.