Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > S1026 > BY23442

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
B1584
BigY2
B1584
22224415-A-C 20062529-A-C DYZ19 ***A*
19671233-C-T 17559353-C-T P5_Prx ***A*
25976582-A-C 23830435-A-C P1_Y1 ***A*
26102176-G-A 23956029-G-A BY22163 P1_Y1 ***A*
22291090-T-G 20129204-T-G DYZ19 ***A*
22232852-T-A 20070966-T-A DYZ19 ***A*
28817423-A-T 26671276-A-T A*
20704952-C-T 18543066-C-T P4_Prx ***A*
6143352-C-T 6275311-C-T IR3_Dst ***A*
16311144-GATGAT-G 14199264-GATGAT-G +
16311150-A-T 14199270-A-T YY+
16450856-T-G 14338976-T-G BY107896 YY++
16712716-C-T 14600836-C-T BY109559 YY++
17151050-G-GT 15039170-G-GT ++
17190284-TA-T 15078404-TA-T ++
18385473-T-C 16273593-T-C BY121529 P6_Gap **+
22487391-T-A 20325505-T-A BY224963 DYZ19 ++
18769271-C-G 16657391-C-G BY123747 YY++
15757637-C-A 13645757-C-A BY103897 YY++
22228841-T-A 20066955-T-A DYZ19 ++
22739385-A-T 20577499-A-T BY140439 YY10×T++
23155889-T-A 20994003-T-A BY143446 YY++
23375201-C-G 21213315-C-G BY144893 YY++
24398539-C-T 22252392-C-T Z42133 Y++
26325126-A-G 24178979-A-G BY226758 P1_Y1 ***+
16170952-C-T 14059072-C-T BY105713 Y**+
18631219-C-G 16519339-C-G BY122694 YY++
14319287-G-A 12198581-G-A BY94817 YY++
2914223-T-G 3046182-T-G BY57292 Y++
17208504-TTC-T 15096624-TTC-T ++
21571938-C-T 19410052-C-T M3022 Z4323 YY++
13677557-T-C 11521881-T-C BY88084 ++
13831691-C-T 11710985-C-T BY54512 +
8688392-G-T 8820351-G-T BY75219 YY++
7852698-A-G 7984657-A-G BY68235 YY++
7647501-A-C 7779460-A-C BY66523 YY++
7513296-T-C 7645255-T-C BY65529 Y++
6932051-G-C 7064010-G-C Y35349 YY++
6900773-T-C 7032732-T-C BY62087 YY++
6672557-A-G 6804516-A-G BY60657 YY++
2913955-CCCA-C 3045914-CCCA-C ++
22432302-A-G 20270416-A-G DYZ19 ****
22302066-C-G 20140180-C-G BY50085 DYZ19 ****
14042746-G-A 11922040-G-A **
22982053-G-A 20820167-G-A **
14573093-C-A 12461293-C-A **
14557993-C-A 12446194-C-A **
14527059-G-T 12415260-G-T **
14506970-C-A 12395175-C-A **
14495594-G-T 12383791-G-T **
12376069-A-T **
12375217-G-T **
14483009-C-A 12362278-C-A **
14480153-C-A 12359422-C-A **
13809953-G-A 11689247-G-A **
22993172-C-A 20831286-C-A **
22198897-T-A 20037011-T-A **
22200377-A-G 20038491-A-G **
13962196-C-A 11841490-C-A **
22200695-T-C 20038809-T-C **
22488986-C-A 20327100-C-A DYZ19 **
13934374-C-A 11813668-C-A **
22902015-C-A 20740129-C-A **
14247636-A-G 12126930-A-G **
22127927-C-T 19966041-C-T **
14226318-C-A 12105612-C-A **
14219759-G-A 12099053-G-A **
14200645-C-A 12079939-C-A **
14035254-C-G 11914548-C-G **
22926840-C-A 20764954-C-A **
14192080-C-A 12071374-C-A **
14143913-C-A 12023207-C-A **
14136265-C-A 12015559-C-A **
13890989-C-T 11770283-C-T **
13896433-C-A 11775727-C-A **
22169786-T-A 20007900-T-A **
20629-A-G **
14588918-A-G 12477118-A-G **
15070622-A-G 12958713-A-G **
14916716-C-A 12804783-C-A **
22032743-C-A 19870857-C-A **
14981011-C-A 12869087-C-A **
15035029-T-C 12923117-T-C **
21945503-A-G 19783617-A-G **
21923891-G-A 19762005-G-A **
15126414-G-A 13014501-G-A FT157160 **
14807410-CAT-C 12695481-CAT-C **
15131567-C-T 13019654-C-T **
15132064-C-A 13020151-C-A **
21923890-G-C 19762004-G-C **
15197421-T-C 13085507-T-C **
15209443-A-G 13097529-A-G **
15239161-C-A 13127247-C-A **
14842470-G-A 12730536-G-A FT121846 **
14807409-C-G 12695480-C-G **
14594285-A-C 12482485-A-C **
14658430-T-C 12546495-T-C **
14598014-C-A 12486214-C-A **
22113162-T-G 19951276-T-G **
14643600-T-C 12531669-T-C **
14645124-C-A 12533193-C-A **
14658401-A-AG 12546466-A-AG **
14658410-G-C 12546475-G-C **
14658431-T-G 12546496-T-G **
22036457-C-A 19874571-C-A **
14661681-GA-G 12549746-GA-G 8×A**
14671906-C-A 12559972-C-A **
14717780-T-C 12605848-T-C **
14747483-C-A 12635552-C-A **
23006796-CA-C 20844910-CA-C **
22085954-A-C 19924068-A-C **
23006787-G-A 20844901-G-A **
11023037-A-T **
11675280-C-A **
10862826-C-T **
10918459-A-C **
23439987-T-A 21278101-T-A **
10898233-C-A **
10898225-C-A **
10895967-A-C **
10895167-T-C **
10881013-C-T **
10881010-T-C **
23468433-G-A 21306547-G-A **
10877841-T-C **
10877840-T-A **
10871197-C-T **
10866902-C-A **
10862854-T-C **
10859141-A-T **
23439978-C-A 21278092-C-A **
10774084-C-A **
23528848-CTTTA-C 21366962-CTTTA-C 5×TTTA**
23493539-C-A 21331653-C-A **
23476068-T-G 21314182-T-G **
10772657-A-AT **
10772662-T-TTGCC **
23476052-TCG-T 21314166-TCG-T **
10799616-A-AATCCATTCCG **
10842728-T-A **
10832186-G-A **
10838193-C-A **
10841112-T-C **
10841113-G-A **
10841353-A-C **
10841871-C-A **
10940112-C-T **
10950024-C-A **
23098804-G-T 20936918-G-T **
13624258-A-T 11468582-A-T **
13271777-A-T 11116101-A-T **
13327153-T-G 11171477-T-G **
13482909-G-A 11327233-G-A **
13493999-T-C 11338323-T-C **
13565796-A-G 11410120-A-G **
13596571-C-A 11440895-C-A **
11644259-A-G **
13217960-C-T 11062284-C-T **
11648984-G-T **
11654487-T-A **
11663554-A-G **
11667419-C-G **
11670376-T-C **
11670802-C-A **
23256312-C-A 21094426-C-A **
23279546-C-A 21117660-C-A **
10956516-A-C **
10989339-C-A **
10960917-G-C **
10970957-A-C **
10970958-C-T **
10976800-C-A **
10978209-G-T **
10987587-T-C **
10997519-T-C **
11026373-C-A **
16229898-C-T 14118018-C-T A14079A14079 **
23371922-C-A 21210036-C-A **
23311434-A-C 21149548-A-C **
11023033-A-T **
21923875-G-A 19761989-G-A **
11023038-A-G **
15358744-G-A 13246863-G-A **
16008200-G-T 13896320-G-T **
15412971-A-G 13301091-A-G **
18145799-C-A 16033919-C-A **
18959200-G-C 16847320-G-C **
18923337-AGGCTGTTTTTTTTTTTTTTTTTTGGTTG-A 16811457-AGGCTGTTTTTTTTTTTTTTTTTTGGTTG-A **
18895714-A-AT 16783834-A-AT **
20943511-GTAAGT-G 18781625-GTAAGT-G P4_Dst **
18801900-C-A 16690020-C-A **
18754696-C-A 16642816-C-A **
18723924-C-A 16612044-C-A **
18709238-C-A 16597358-C-A **
20943521-TG-T 18781635-TG-T P4_Dst **
18528864-G-T 16416984-G-T P6_Dst **
18454879-C-A 16342999-C-A P6_Dst **
18226903-A-G 16115023-A-G **
18206690-C-A 16094810-C-A **
18174814-G-A 16062934-G-A **
18128127-G-A 16016247-G-A **
19057930-T-G 16946050-T-G **
17599035-G-A 15487155-G-A FGC63119 **
17575547-G-T 15463667-G-T **
17591257-AG-A 15479377-AG-A **
17591383-C-A 15479503-C-A **
17599023-A-T 15487143-A-T **
17599027-G-T 15487147-G-T FT157583 **
17599030-T-C 15487150-T-C **
17750994-C-A 15639114-C-A **
18128122-T-A 16016242-T-A **
20962009-G-A 18800123-G-A P4_Dst **
17885158-C-A 15773278-C-A **
17887689-G-A 15775809-G-A **
17896208-C-A 15784328-C-A **
20948163-C-A 18786277-C-A P4_Dst **
18019133-C-A 15907253-C-A **
18964127-C-A 16852247-C-A **
19059442-C-A 16947562-C-A **
17546124-C-A 15434244-C-A **
19447499-C-G 17335619-C-G **
19447476-A-ACT 17335596-A-ACT **
19447486-G-A 17335606-G-A **
19447489-A-T 17335609-A-T **
19447491-C-G 17335611-C-G **
19447492-A-G 17335612-A-G Y75356 **
19447497-T-C 17335617-T-C **
19447501-G-C 17335621-G-C **
20611305-G-T 18449419-G-T P5_Dst **
19447509-T-C 17335629-T-C **
19447523-G-A 17335643-G-A **
19447525-C-T 17335645-C-T **
19451933-C-A 17340053-C-A FT213318 **
19465903-A-G 17354023-A-G **
20366787-G-T 18204901-G-T P5_Dst **
19447468-G-A 17335588-G-A **
19391751-G-T 17279871-G-T **
19109943-A-G 16998063-A-G **
19274814-A-C 17162934-A-C **
19109985-C-G 16998105-C-G **
20943503-T-G 18781617-T-G P4_Dst **
19135098-G-A 17023218-G-A **
20943498-T-G 18781612-T-G P4_Dst **
19168495-T-C 17056615-T-C **
20801718-C-T 18639832-C-T P4_Prx **
19280889-ATGAGTGAG-A 17169009-ATGAGTGAG-A **
19362682-C-A 17250802-C-A **
20715260-A-G 18553374-A-G P4_Prx **
19304648-C-T 17192768-C-T **
19333482-T-C 17221602-T-C **
19333489-A-C 17221609-A-C **
19337404-C-A 17225524-C-A **
19358661-C-A 17246781-C-A **
17550739-A-T 15438859-A-T **
17502814-G-A 15390934-G-A **
15412976-G-A 13301096-G-A **
16077007-C-T 13965127-C-T **
21462594-C-A 19300708-C-A **
9890558-G-A 10052949-G-A **
16028991-T-C 13917111-T-C **
16048015-C-T 13936135-C-T **
16048091-A-G 13936211-A-G **
16049090-T-A 13937210-T-A **
16104400-A-T 13992520-A-T P8_Prx **
21563203-C-G 19401317-C-G **
16104403-C-T 13992523-C-T P8_Prx **
16181444-G-T 14069564-G-T **
16201021-T-C 14089141-T-C **
16229905-T-C 14118025-T-C **
16229908-A-G 14118028-A-G **
16229924-T-G 14118044-T-G **
15963943-C-A 13852063-C-A **
21569966-A-T 19408080-A-T **
21394279-C-A 19232393-C-A **
15641825-A-G 13529945-A-G **
15412977-A-G 13301097-A-G **
15426199-CAGG-C 13314319-CAGG-C **
15556974-T-A 13445094-T-A **
15556979-T-A 13445099-T-A **
15568486-C-T 13456606-C-T BY102589 **
15636747-A-T 13524867-A-T **
21884427-T-C 19722541-T-C **
15866049-G-A 13754169-G-A **
15687597-C-A 13575717-C-A **
15746813-A-G 13634933-A-G **
21818848-A-T 19656962-A-T **
15764325-C-A 13652445-C-A **
21761152-A-G 19599266-A-G **
15866047-G-A 13754167-G-A **
21394791-T-C 19232905-T-C **
16278929-A-G 14167049-A-G **
17494637-C-A 15382757-C-A **
17383537-C-A 15271657-C-A **
17048266-C-A 14936386-C-A **
17195015-T-C 15083135-T-C **
21084374-T-A 18922488-T-A **
17243835-G-A 15131955-G-A **
17264344-TG-A 15152464-TG-A **
17342758-C-A 15230878-C-A **
17386684-A-G 15274804-A-G **
21139671-A-G 18977785-A-G **
17386686-A-G 15274806-A-G **
17414369-A-T 15302489-A-T **
21012294-C-A 18850408-C-A P4_Dst **
17449238-C-T 15337358-C-T **
17449292-C-A 15337412-C-A **
17465169-C-A 15353289-C-A **
21093498-C-A 18931612-C-A **
21140955-T-C 18979069-T-C **
21370298-C-A 19208412-C-A **
16531013-G-A 14419133-G-A **
16295619-C-A 14183739-C-A **
16362369-C-A 14250489-C-A **
16417524-T-A 14305644-T-A **
21353412-A-G 19191526-A-G **
16486746-G-T 14374866-G-T **
16503872-C-T 14391992-C-T FT236963 **
21294990-C-A 19133104-C-A **
21140964-G-T 18979078-G-T **
16588473-G-T 14476593-G-T **
16612422-C-A 14500542-C-A **
16648147-GA-T 14536267-GA-T **
21265358-A-G 19103472-A-G **
21248552-C-A 19086666-C-A **
16836708-C-A 14724828-C-A **
9907519-G-T 10069910-G-T **
19476592-AC-A 17364712-AC-A **
9873723-G-T 10036114-G-T **
28562288-C-A 26416141-C-A **
9438151-A-C 9600542-A-C **
25520738-G-T 23374591-G-T P1_gr1 **
8665787-T-G 8797746-T-G **
11666024-C-A **
21090980-T-A 18929094-T-A **
4208901-C-A 4340860-C-A **
6700863-T-G 6832822-T-G **
19447485-A-G 17335605-A-G **
22810210-C-A 20648324-C-A **
21382170-C-A 19220284-C-A **
7092498-C-A 7224457-C-A **
3492630-C-A 3624589-C-A **
19226457-C-A 17114577-C-A **
10877765-C-T **
9438140-C-T 9600531-C-T **
11023029-T-C **
2666619-T-TA 2798578-T-TA **
25990588-C-G 23844441-C-G P1_Y1 **
10956534-C-A **
10956542-T-TCCATA **
18687874-C-A 16575994-C-A **
8124903-C-A 8256862-C-A **
7155326-C-A 7287285-C-A **
18092922-C-A 15981042-C-A **
20650560-T-TC 18488674-T-TC P4_Prx **
13459320-GCATTC-G 11303644-GCATTC-G 5×CATTC**
8140217-C-A 8272176-C-A **
7083918-C-A 7215877-C-A **
8016980-C-A 8148939-C-A **
21176901-C-A 19015015-C-A **
25533168-ATATCCTCACCAAT-A 23387021-ATATCCTCACCAAT-A P1_gr1 **
10961409-T-C **
17692227-C-A 15580347-C-A **
2666626-A-G 2798585-A-G **
22113180-T-C 19951294-T-C **
4219393-C-A 4351352-C-A **
3880509-G-T 4012468-G-T **
3915863-GA-G 4047822-GA-G 10×A**
4010969-CT-C 4142928-CT-C 8×T**
4108109-AT-A 4240068-AT-A **
4163724-G-T 4295683-G-T **
4178404-A-G 4310363-A-G **
4262572-A-C 4394531-A-C **
3831371-C-T 3963330-C-T **
4262669-G-T 4394628-G-T **
24502968-T-G 22356821-T-G **
4371812-C-A 4503771-C-A **
4479370-C-A 4611329-C-A **
4557473-T-C 4689432-T-C **
23544875-G-T 21382989-G-T **
3849060-A-T 3981019-A-T **
3804155-AT-A 3936114-AT-A **
2799626-C-A 2931585-C-A **
2960094-A-T 3092053-A-T **
2807038-A-C 2938997-A-C **
2853250-T-A 2985209-T-A **
2853664-T-C 2985623-T-C **
2859622-C-A 2991581-C-A **
25246404-C-G 23100257-C-G P2_r1 **
24886397-A-G 22740250-A-G g1 **
3183139-C-A 3315098-C-A **
3804140-C-A 3936099-C-A **
3208363-G-A 3340322-G-A **
3208378-A-G 3340337-A-G **
3405610-C-A 3537569-C-A **
3409889-T-C 3541848-T-C **
3678901-C-A 3810860-C-A **
3725878-C-A 3857837-C-A **
10956521-C-T **
9926839-C-A 10089230-C-A **
4665442-C-A 4797401-C-A **
28547266-G-A 26401119-G-A **
28722270-T-C 26576123-T-C **
28611690-GT-G 26465543-GT-G 8×T**
28587637-C-A 26441490-C-A **
28555688-C-G 26409541-C-G **
27273721-C-T 25127574-C-T P1_g3 **
19447514-A-T 17335634-A-T **
14000631-C-A 11879925-C-A **
22359679-G-C 20197793-G-C DYZ19 *****
28465745-T-A 26319598-T-A **
20645885-C-T 18483999-C-T P4_Prx **
28234424-A-ATC 26088277-A-ATC P1_b4 **
3581531-G-T 3713490-G-T **
28099521-C-A 25953374-C-A P1_Y2 **
10921524-T-A **
28783325-C-A 26637178-C-A **
28783339-C-A 26637192-C-A **
4969252-G-T 5101211-G-T **
28801423-G-T 26655276-G-T **
4613558-TAC-T 4745517-TAC-T **
23734347-GGCA-G 21572461-GGCA-G 5×GCA**
21140946-A-G 18979060-A-G F565 M1687 ****
56849145-T-A **
56823329-C-A **
56756857-T-G **
28798113-G-C 26651966-G-C **
28791171-TAG-T 26645024-TAG-T **
28798110-G-A 26651963-G-A **
14658408-C-T 12546473-C-T PR1532 ****
28798097-GAACTA-G 26651950-GAACTA-G **
28791182-A-ATT 26645035-A-ATT **
28791181-C-A 26645034-C-A **
28791178-G-T 26645031-G-T **
10921524-T-TCCATC **
7179770-C-T 7311729-C-T **
18191290-C-A 16079410-C-A **
26078795-G-T 23932648-G-T P1_Y1 **
3286768-C-A 3418727-C-A **
15746780-C-A 13634900-C-A **
7401140-A-ATT 7533099-A-ATT 14×T**
10946603-C-A **
9945889-C-A 10108280-C-A **
16229922-A-C 14118042-A-C **
19022318-C-A 16910438-C-A **
21375523-C-A 19213637-C-A **
19022321-CA-C 16910441-CA-C **
14286816-G-A 12166110-G-A **
14539215-C-A 12427416-C-A **
9778875-C-A 9941266-C-A **
10994363-A-T **
25990610-T-A 23844463-T-A P1_Y1 **
11013183-C-A **
10918457-T-C **
11016084-C-A **
28090299-G-C 25944152-G-C P1_Y2 **
8379466-C-A 8511425-C-A **
24904696-A-T 22758549-A-T g1 **
14458556-T-C 12337829-T-C **
18738149-C-T 16626269-C-T **
14274804-C-A 12154098-C-A **
15584963-C-A 13473083-C-A **
27917468-T-A 25771321-T-A P1_Y2 **
26138753-C-A 23992606-C-A P1_Y1 **
10885281-C-A **
6633141-G-T 6765100-G-T **
26440619-G-T 24294472-G-T P1_Y1 **
26248056-C-A 24101909-C-A P1_Y1 **
6915851-A-G 7047810-A-G **
26153808-C-A 24007661-C-A P1_Y1 **
4656066-A-C 4788025-A-C **
4588764-TAACTGGTTTG-T 4720723-TAACTGGTTTG-T **
4695962-G-T 4827921-G-T FT7581 **
7649334-A-ATTTTATTTTATT 7781293-A-ATTTTATTTTATT **
8135194-C-A 8267153-C-A **
8129988-C-A 8261947-C-A **
8076296-C-A 8208255-C-A **
8040077-G-T 8172036-G-T **
8040075-A-G 8172034-A-G **
8040073-A-G 8172032-A-G FT263736 **
8040070-C-G 8172029-C-G **
8002076-T-C 8134035-T-C **
7996015-T-G 8127974-T-G **
7925361-G-C 8057320-G-C **
7904876-C-A 8036835-C-A **
7750722-G-C 7882681-G-C **
7750718-G-A 7882677-G-A **
7699995-C-T 7831954-C-T **
7649329-G-A 7781288-G-A **
8281576-C-A 8413535-C-A **
7432518-C-A 7564477-C-A **
7339775-T-C 7471734-T-C **
4770796-T-C 4902755-T-C **
7376508-C-A 7508467-C-A **
7401157-A-T 7533116-A-T **
7418712-G-T 7550671-G-T **
7422163-C-A 7554122-C-A **
7543871-A-T 7675830-A-T **
7649328-T-C 7781287-T-C **
7562269-C-A 7694228-C-A **
7588858-G-A 7720817-G-A **
7635960-C-G 7767919-C-G **
7640926-G-A 7772885-G-A **
7649314-C-T 7781273-C-T **
7649315-A-G 7781274-A-G **
24013856-TATATATATATATA-T 21867709-TATATATATATATA-T **
23991955-T-C 21845808-T-C FT48411 **
7281095-C-A 7413054-C-A **
9456158-T-A 9618549-T-A **
9438129-TG-T 9600520-TG-T **
9438133-A-T 9600524-A-T **
9438138-G-T 9600529-G-T **
9438141-T-C 9600532-T-C Y65056 **
9438162-A-G 9600553-A-G **
9456153-G-A 9618544-G-A **
9456163-A-C 9618554-A-C **
9373079-C-A 9535470-C-A **
9500136-A-G 9662527-A-G **
23609478-C-T 21447592-C-T **
23560852-C-A 21398966-C-A **
9619684-C-A 9782075-C-A IR3_Prx **
9700758-G-T 9863149-G-T IR3_Prx **
9702922-A-T 9865313-A-T IR3_Prx **
20306062-G-T 18144176-G-T P5_Dst **
9223128-T-C 9385519-T-C **
8314114-C-A 8446073-C-A **
8751359-CTTAT-C 8883318-CTTAT-C **
8466222-T-A 8598181-T-A **
8665786-A-G 8797745-A-G **
8665791-A-AT 8797750-A-AT **
8665800-A-T 8797759-A-T **
8665805-T-A 8797764-T-A **
8665809-T-G 8797768-T-G **
8774470-C-A 8906429-C-A **
23802368-C-G 21640482-C-G **
8854141-C-A 8986100-C-A **
23807923-C-A 21646037-C-A **
8992894-G-T 9155285-G-T **
9074059-C-G 9236450-C-G **
9091665-T-C 9254056-T-C **
9091666-G-A 9254057-G-A **
7312634-A-C 7444593-A-C 5×AGGG**
7340236-C-T 7472195-C-T **
7254613-C-A 7386572-C-A **
6693542-A-G 6825501-A-G **
5690206-C-A 5822165-C-A **
6791287-T-A 6923246-T-A **
6791286-C-T 6923245-C-T **
6791282-G-A 6923241-G-A **
5819913-C-A 5951872-C-A **
6782654-A-T 6914613-A-T **
7247967-G-A 7379926-G-A **
6780858-A-T 6912817-A-T **
6700865-A-G 6832824-A-G **
6700859-G-A 6832818-G-A **
24502967-C-T 22356820-C-T **
6700858-T-C 6832817-T-C **
6700851-A-G 6832810-A-G **
6653935-C-A 6785894-C-A **
6277344-C-A 6409303-C-A IR3_Dst **
6541219-T-C 6673178-T-C **
24502946-A-G 22356799-A-G **
6491270-C-A 6623229-C-A **
6491204-G-A 6623163-G-A **
5997536-C-A 6129495-C-A **
6475329-T-A 6607288-T-A **
6374081-GC-G 6506040-GC-G **
6293316-G-A 6425275-G-A IR3_Dst **
6012705-C-A 6144664-C-A **
6277361-C-CAA 6409320-C-CAA IR3_Dst **
6277354-G-T 6409313-G-T IR3_Dst **
6277334-T-TCC 6409293-T-TCC IR3_Dst **
6277332-ATTT-A 6409291-ATTT-A IR3_Dst 8×T**
6855467-C-A 6987426-C-A **
6864588-A-G 6996547-A-G **
5362724-C-A 5494683-C-A **
7058592-G-A 7190551-G-A **
24492438-G-T 22346291-G-T **
4780389-A-G 4912348-A-G **
7224021-G-A 7355980-G-A **
7221795-G-A 7353754-G-A **
7192043-C-A 7324002-C-A **
7187640-A-G 7319599-A-G **
7179828-G-A 7311787-G-A **
7142262-C-A 7274221-C-A **
7141114-C-A 7273073-C-A **
7130714-C-A 7262673-C-A **
7113187-C-A 7245146-C-A **
4903153-G-T 5035112-G-T **
7088459-A-G 7220418-A-G **
7031205-A-G 7163164-A-G **
6881596-C-A 7013555-C-A **
7029994-C-A 7161953-C-A **
7021957-C-A 7153916-C-A **
6971831-G-T 7103790-G-T **
5050992-G-T 5182951-G-T **
6952511-A-G 7084470-A-G **
6952498-C-T 7084457-C-T **
5080996-T-C 5212955-T-C **
6952491-T-C 7084450-T-C **
6952488-A-G 7084447-A-G **
6948225-C-T 7080184-C-T **
6921885-A-G 7053844-A-G **
6917942-T-C 7049901-T-C **
6277353-T-G 6409312-T-G IR3_Dst **
21911890-C-A 19750004-C-A ***
56850971-C-T ***
23432798-C-A 21270912-C-A ***
21875347-C-A 19713461-C-A ***
22046023-C-A 19884137-C-A ***
22106727-A-T 19944841-A-T FGC60828 ***
24508481-T-A 22362334-T-A ***
23822033-T-A 21660147-T-A ***
24001398-C-A 21855251-C-A ***
24383544-A-G 22237397-A-G ***
28076589-T-A 25930442-T-A P1_Y2 ***
23414242-C-A 21252356-C-A ***
24429266-C-A 22283119-C-A ***
23310694-A-G 21148808-A-G ***
21323319-G-A 19161433-G-A ***
21251093-C-A 19089207-C-A ***
23061633-C-A 20899747-C-A ***
23620939-C-T 21459053-C-T ***
13853705-G-T 11732999-G-T ***
19504035-C-A 17392155-C-A ***
8162012-CA-C 8293971-CA-C ***
19240791-G-T 17128911-G-T ***
56734781-C-A ***
9111595-G-T 9273986-G-T ***
2908159-C-A 3040118-C-A ***
2912622-C-A 3044581-C-A ***
3650920-TA-T 3782879-TA-T ***
4357061-A-G 4489020-A-G ***
5911765-C-A 6043724-C-A ***
6519711-C-A 6651670-C-A ***
7247686-TAA-T 7379645-TAA-T 11×A***
7896706-C-A 8028665-C-A ***
8142891-C-A 8274850-C-A ***
8151510-G-T 8283469-G-T ***
8290542-C-A 8422501-C-A ***
23438262-T-A 21276376-T-A ***
8406225-C-A 8538184-C-A ***
8913161-C-A 9045120-C-A ***
9133646-C-T 9296037-C-T ***
9404541-G-T 9566932-G-T ***
9504467-G-T 9666858-G-T ***
9512127-C-A 9674518-C-A ***
9777950-C-A 9940341-C-A ***
10032877-C-A 10195268-C-A ***
10665795-G-T ***
10673889-A-ACTAAACTTCT ***
10773166-C-G ***
10878206-A-G ***
10900000-C-A ***
10825290-C-CGGATTA ***
16679143-C-T 14567263-C-T ***
10965214-C-A ***
22346591-T-C 20184705-T-C DYZ19 ***
13859377-ATGACATGGAG-A 11738671-ATGACATGGAG-A ***
10012587-G-A 10174978-G-A ***
58976264-C-A 56830117-C-A ***
13457683-TTCCAA-T,TTCCAT 11302007-TTCCAA-T,TTCCAT ***
13469886-C-A 11314210-C-A ***
13600608-C-A 11444932-C-A ******
13699933-T-G 11544257-T-G ***
13814095-T-A 11693389-T-A BY90353 ***
20682169-C-T 18520283-C-T P4_Prx ***
22227510-G-T 20065624-G-T DYZ19 ***
22244036-T-C 20082150-T-C DYZ19 ***
22264314-T-C 20102428-T-C DYZ19 ***
22287375-G-C 20125489-G-C DYZ19 ***
22430482-G-A 20268596-G-A DYZ19 ******
9382377-C-A 9544768-C-A ***
23177362-TGGTACCTTCTGCCTGAGTATCACTCA-T 21015476-TGGTACCTTCTGCCTGAGTATCACTCA-T ***
25054927-G-A 22908780-G-A g1 ***
25731567-A-G 23585420-A-G P1_b3 ***
27007892-C-T 24861745-C-T P1_r4 ***
13487742-CT-G 11332066-CT-G ***
19071534-C-A 16959654-C-A ***
15029515-A-T 12917603-A-T ***
22030077-C-A 19868191-C-A ***
8034473-A-AT 8166432-A-AT 10×T***
8874970-CTT-C,CT 9006929-CTT-C,CT 17×T***
13465943-A-T 11310267-A-T ***
17864201-C-A 15752321-C-A ***
17678657-C-A 15566777-C-A ***
10944566-C-G ***
10999968-G-A FT255301 ***
19476394-TAGAAATTTTAAGCAA-T 17364514-TAGAAATTTTAAGCAA-T ***
16868459-C-A 14756579-C-A ***
15865651-C-A 13753771-C-A ***
15922281-G-T 13810401-G-T ***
15950254-A-C 13838374-A-C ***
15966081-C-A 13854201-C-A ***
16234848-A-G 14122968-A-G ***
16240994-G-A 14129114-G-A ***
16282368-C-A 14170488-C-A ***
16483677-C-A 14371797-C-A ***
16520827-A-T 14408947-A-T ***
16564398-A-G 14452518-A-G Y32452 ***
16669278-C-A 14557398-C-A ***
16707351-G-T 14595471-G-T ***
16745433-C-A 14633553-C-A ***
16910566-T-C 14798686-T-C ***
15689603-C-A 13577723-C-A ***
17041948-C-A 14930068-C-A ***
17047918-A-C 14936038-A-C ***
17209990-C-A 15098110-C-A ***
17448295-C-A 15336415-C-A ***
17882956-C-A 15771076-C-A ***
18007589-T-A 15895709-T-A P7_Gap ***
18630127-C-A 16518247-C-A ***
18864944-T-A 16753064-T-A ***
19128461-C-A 17016581-C-A ***
19161901-C-A 17050021-C-A ***
19241593-C-A 17129713-C-A ***
19300487-C-A 17188607-C-A ***
19405047-C-A 17293167-C-A ***
15747357-C-A 13635477-C-A ***
15665846-C-A 13553966-C-A ***
11000497-C-A ***
14250225-G-T 12129519-G-T ***
11023023-T-TATCCG ***
11030203-C-A,T ***
13194254-G-T 11038578-G-T ***
13231553-C-A 11075877-C-A ***
11672625-C-A ***
11676816-G-A ***
13801026-A-C 11680320-A-C ***
13801110-CATCGA-C,CATGGA 11680404-CATCGA-C,CATGGA ***
13828324-A-G 11707618-A-G ***
13828325-A-G 11707619-A-G FT195813 ***
13855548-AT-A 11734842-AT-A ***
13921166-C-A 11800460-C-A ***
14070248-C-A 11949542-C-A ***
14262364-C-A 12141658-C-A ***
15470809-TA-T 13358929-TA-T ***
14266622-A-G 12145916-A-G ***
14576429-C-A 12464629-C-A ***
14587905-C-A 12476105-C-A ***
14600818-C-A 12489018-C-A ***
14745065-G-A 12633134-G-A ***
14747961-C-T 12636030-C-T 22×T***
14779785-T-C 12667855-T-C ***
14800118-C-A 12688189-C-A ***
14925178-C-A 12813243-C-A ***
15048484-T-G 12936575-T-G ***
15051797-A-G 12939888-A-G ***
15156412-A-G 13044499-A-G ***
15410751-C-A 13298871-C-A ***
11000468-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: B15841000581371586847219577
Kit: B1584885743172361467175266
Used in age calculations1000581372361467219577
Counts of SNPs2018
Variant counts last updated 2020-10-09 03:00:24.



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