Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > Z2534 > ZZ5 > Z2185 > Z2186 > L1066 > BY15521

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
536042
BigY2
536042
24271088-G-A 22124941-G-A P3_b1 ***A*
22289962-A-C 20128076-A-C DYZ19 ***A*
28816994-A-C 26670847-A-C A*
20715590-A-G 18553704-A-G P4_Prx ***A*
14222-T-G +
13707679-A-G 11552003-A-G BY89331 +
26088542-A-T 23942395-A-T BY44244 P1_Y1 ***+
19314280-A-AT 17202400-A-AT 9×T++
19311196-CTT-C 17199316-CTT-C ++
18181611-A-G 16069731-A-G Y101565 YY++
17307516-TAGATAG-T 15195636-TAGATAG-T +***
7879460-T-C 8011419-T-C BY68420 YY+
9164152-C-T 9326543-C-T BY78689 ++
7879464-T-C 8011423-T-C YY+
7879459-G-GC 8011418-G-GC +
17544665-G-A 15432785-G-A Y99481 YY++
6523355-T-C 6655314-T-C BY42680 **+
8426377-G-GCTTCTTCTTCTT 8558336-G-GCTTCTTCTTCTT 22×CTT****
17307524-TAG-T,TAT 15195644-TAG-T,TAT ****
14297934-C-G 12177228-C-G **
10988672-C-T **
10988684-CGACTT-C **
10993254-A-G **
10994167-C-A **
11000347-T-A **
11008072-C-G **
11008140-A-T **
11021516-C-A **
11021538-A-G **
11025967-C-T **
11024733-A-C **
10977281-T-C **
11025966-TCC-T **
13197790-T-A 11042114-T-A **
13242803-C-A 11087127-C-A **
13242812-T-A 11087136-T-A **
13242931-T-A 11087255-T-A **
13253391-GTTCGGTTTTTTTTTTTTCCTCTGCCCCAGGTGCCTCACCTTTCC-G 11097715-GTTCGGTTTTTTTTTTTTCCTCTGCCCCAGGTGCCTCACCTTTCC-G **
13302028-C-A 11146352-C-A **
13324925-G-C 11169249-G-C **
10977385-T-C **
10969140-G-A **
13421380-C-A 11265704-C-A **
10889640-C-A **
10838971-A-C **
10838981-A-G **
10845548-A-G **
10845575-C-G **
10850771-A-T **
10850777-C-G **
10875992-A-C **
10876284-T-G **
10888967-C-A **
10889571-T-A **
10890125-C-A **
10967417-C-A **
10890135-C-A **
10893620-T-A **
10894253-T-C **
10901564-C-G **
10924848-AT-A **
10932365-A-G **
10936097-C-A **
10936141-C-G **
10940436-C-A **
10941320-A-C **
10952695-C-A **
13412017-T-A 11256341-T-A **
13535781-G-T 11380105-G-T **
13508958-A-T 11353282-A-T **
14023014-A-T 11902308-A-T **
13859225-G-T 11738519-G-T **
13884875-AC-A 11764169-AC-A **
13951499-A-T 11830793-A-T **
13966660-C-A 11845954-C-A **
13974656-A-C 11853950-A-C **
13984297-C-A 11863591-C-A **
13987083-T-C 11866377-T-C **
14019482-T-C 11898776-T-C **
14019483-T-A 11898777-T-A **
14025510-C-A 11904804-C-A **
13855993-C-T 11735287-C-T **
14025587-A-G 11904881-A-G **
14025907-G-A 11905201-G-A **
14067193-C-A 11946487-C-A **
14099806-C-A 11979100-C-A **
14143403-A-G 12022697-A-G **
14178033-C-A 12057327-C-A **
14183223-A-C 12062517-A-C **
14200591-C-A 12079885-C-A **
14212411-C-A 12091705-C-A **
14219628-T-C 12098922-T-C **
13856224-A-G 11735518-A-G **
13855858-T-G 11735152-T-G **
14224174-C-A 12103468-C-A **
13594615-G-T 11438939-G-T **
14555111-A-G 12443312-A-G **
14555078-T-G 12443279-T-G **
14548201-C-A 12436402-C-A **
14526616-T-C 12414817-T-C **
14483524-C-T 12362793-C-T **
14483195-C-A 12362464-C-A **
10812989-C-T **
14463341-G-T 12342614-G-T **
13577128-G-A 11421452-G-A **
14441900-T-G 12321173-T-G **
13855816-A-T 11735110-A-T Y31462 **
14397713-C-T 12277009-C-T **
14372140-C-A 12251436-C-A **
13621769-A-T 11466093-A-T **
13625175-C-A 11469499-C-A **
14319486-T-C 12198780-T-C **
13716693-A-C 11561017-A-C **
11652426-A-G **
11673683-A-C **
11674913-G-A **
11675395-C-A **
10821050-C-A **
10785288-C-CGTTTA **
10812985-A-G **
7204913-G-A 7336872-G-A **
6765888-T-C 6897847-T-C **
6765892-C-G 6897851-C-G **
6765894-T-C 6897853-T-C **
6892514-A-T 7024473-A-T **
6976476-C-A 7108435-C-A **
6977182-A-G 7109141-A-G **
6984616-T-C 7116575-T-C **
7084491-A-G 7216450-A-G **
7109326-A-T 7241285-A-T **
7225533-C-A 7357492-C-A **
6492679-G-T 6624638-G-T **
7316630-G-A 7448589-G-A Y83888 **
7340511-C-G 7472470-C-G Y83945 **
7374476-T-C 7506435-T-C Y84018 **
7422270-T-A 7554229-T-A **
7424822-C-A 7556781-C-A **
7428145-T-G 7560104-T-G **
7579779-T-C 7711738-T-C **
7623469-AAAAAG-A 7755428-AAAAAG-A 5×AAAAG**
7753391-G-T 7885350-G-T **
7897455-T-A 8029414-T-A **
6505796-G-A 6637755-G-A **
6277753-A-ACCG 6409712-A-ACCG IR3_Dst **
8043320-C-T 8175279-C-T **
5335929-TG-T 5467888-TG-T **
4999795-C-T 5131754-C-T **
5107542-C-A 5239501-C-A **
5170495-A-C 5302454-A-C **
5170587-T-C 5302546-T-C **
5171571-C-A 5303530-C-A **
5199689-A-T 5331648-A-T **
5219332-G-GT 5351291-G-GT **
58982322-G-C 56836175-G-C **
5220322-C-A 5352281-C-A **
5275678-G-T 5407637-G-T **
5708432-A-T 5840391-A-T **
6096958-A-C 6228917-A-C **
5779403-G-T 5911362-G-T **
5779427-G-T 5911386-G-T **
5785861-A-G 5917820-A-G **
5829033-A-T 5960992-A-T **
5841982-C-A 5973941-C-A **
5844078-C-A 5976037-C-A **
5864657-G-C 5996616-G-C **
5927201-G-T 6059160-G-T **
5976970-C-A 6108929-C-A **
6029321-A-G 6161280-A-G **
8043208-T-C 8175167-T-C **
8075113-C-A 8207072-C-A **
10804928-T-C **
10771323-C-A **
10758822-T-G **
10758856-T-A **
10758903-C-A **
10760656-C-T **
10763709-TC-T **
10768418-T-A **
10768461-C-A **
10768589-A-C **
10769210-C-A **
10772176-C-G **
10678249-G-A **
10772827-C-T **
10775865-GATTCC-G **
10785010-C-A **
14559898-G-T 12448099-G-T **
10785979-A-T **
10787908-A-G **
10791190-C-T **
10802241-C-T **
10803395-C-A **
10803765-C-A **
10692704-T-C **
10677632-A-G **
8153921-C-A 8285880-C-A **
9925259-T-C 10087650-T-C **
8269795-G-A 8401754-G-A **
8661053-G-A 8793012-G-A **
8674127-A-T 8806086-A-T **
8913374-C-G 9045333-C-G **
9013074-G-T 9175465-G-T **
9402483-C-A 9564874-C-A **
9538061-T-C 9700452-T-C IR3_Prx **
9887245-A-T 10049636-A-T **
9889239-C-A 10051630-C-A **
9889505-A-T 10051896-A-T **
9962624-G-T 10125015-G-T **
10677617-A-G **
10040281-G-T 10202672-G-T **
10648123-ATTCC-A **
10655169-C-A **
10656961-C-A **
10657459-C-A **
10657669-C-A **
10660237-T-C **
10660246-A-G **
10669669-TCCA-T **
10673440-T-C **
14557209-C-A 12445410-C-A **
15288920-A-C 13177019-A-C **
14815538-G-T 12703609-G-T **
20567727-C-A 18405841-C-A P5_Dst **
19775260-T-G 17663380-T-G P5_Prx **
19775273-T-A 17663393-T-A P5_Prx **
20073834-T-TAA 17961954-T-TAA P5_Dst **
20101653-T-C 17989773-T-C P5_Dst **
20101656-A-C 17989776-A-C P5_Dst **
20567704-T-C 18405818-T-C P5_Dst **
20567713-C-T 18405827-C-T P5_Dst **
20567714-T-TG 18405828-T-TG P5_Dst **
20567717-G-A 18405831-G-A P5_Dst **
20727579-T-A 18565693-T-A P4_Prx **
19600472-ATG-A 17488592-ATG-A P5_Prx **
20809631-C-A 18647745-C-A P4_Gap **
20809694-G-T 18647808-G-T P4_Gap **
20888475-T-C 18726589-T-C P4_Dst **
20888563-T-G 18726677-T-G P4_Dst **
21263515-C-A 19101629-C-A **
21383389-C-T 19221503-C-T **
21405804-T-A 19243918-T-A **
21405807-T-G 19243921-T-G **
21405816-T-C 19243930-T-C **
21412301-A-G 19250415-A-G **
19631330-T-A 17519450-T-A P5_Prx **
19522491-A-C 17410611-A-C **
21460008-C-A 19298122-C-A **
19299195-A-T 17187315-A-T **
19071486-T-G 16959606-T-G **
19129642-C-G 17017762-C-G **
19129647-G-A 17017767-G-A **
19146609-T-G 17034729-T-G **
19168769-A-G 17056889-A-G **
19223110-C-A 17111230-C-A **
19259026-C-T 17147146-C-T **
19259151-C-A 17147271-C-A **
19274764-C-T 17162884-C-T **
19274777-T-A 17162897-T-A **
19301735-C-A 17189855-C-A **
19520801-C-A 17408921-C-A **
19302401-A-C 17190521-A-C **
19340340-A-G 17228460-A-G **
19340349-G-A 17228469-G-A **
19340371-C-T 17228491-C-T **
19340382-G-C 17228502-G-C **
19340474-T-A 17228594-T-A **
19382304-GATTATTATT-G 17270424-GATTATTATT-G 7×ATT**
19436904-G-A 17325024-G-A **
19438620-G-A 17326740-G-A **
19448353-C-A 17336473-C-A **
21435131-G-T 19273245-G-T **
21472308-C-A 19310422-C-A **
18956307-T-A 16844427-T-A **
28536157-T-A 26390010-T-A **
26326193-C-A 24180046-C-A P1_Y1 **
27618326-C-A 25472179-C-A P1_Y2 **
27733722-A-G 25587575-A-G P1_Y2 **
27996128-A-AT 25849981-A-AT P1_Y2 **
27996149-T-A 25850002-T-A P1_Y2 **
28441428-A-C 26295281-A-C P1_gr2 **
28479822-C-A 26333675-C-A **
28480270-T-A 26334123-T-A **
28482946-C-A 26336799-C-A **
28594827-A-G 26448680-A-G **
25356676-G-T 23210529-G-T P2_r2 **
28625829-C-A 26479682-C-A **
28629532-G-T 26483385-G-T **
28659525-G-C 26513378-G-C **
28659694-C-A 26513547-C-A **
28660640-T-C 26514493-T-C **
28760123-T-C 26613976-T-C **
28777359-C-A 26631212-C-A **
28815148-G-T 26669001-G-T **
56840869-C-A **
7001-A-T **
26228589-C-A 24082442-C-A P1_Y1 **
24666435-C-A 22520288-C-A P3_b2 **
21582610-T-A 19420724-T-A **
22660850-C-A 20498964-C-A **
21624789-A-G 19462903-A-G **
21673136-C-A 19511250-C-A **
21747703-G-T 19585817-G-T **
21769989-C-A 19608103-C-A **
21827629-C-G 19665743-C-G **
21863311-C-A 19701425-C-A **
22068609-C-A 19906723-C-A **
22130194-A-G 19968308-A-G **
22191688-G-T 20029802-G-T **
22253127-T-C 20091241-T-C DYZ19 **
22777222-T-A 20615336-T-A **
24459979-C-A 22313832-C-A **
22811160-C-A 20649274-C-A **
22884957-A-G 20723071-A-G **
22902089-C-A 20740203-C-A **
23006695-G-A 20844809-G-A **
23006966-T-C 20845080-T-C **
23062236-T-G 20900350-T-G **
23345666-G-C 21183780-G-C **
23426977-C-A 21265091-C-A **
24406416-G-T 22260269-G-T **
24406620-C-T 22260473-C-T **
18966191-T-G 16854311-T-G **
18950681-A-G 16838801-A-G **
15045600-G-C 12933690-G-C **
15999886-G-A 13888006-G-A **
15824124-C-A 13712244-C-A **
15866016-C-G 13754136-C-G **
15866118-C-G 13754238-C-G **
15909509-C-A 13797629-C-A **
15912117-T-C 13800237-T-C **
15912127-T-C 13800247-T-C **
15964724-C-A 13852844-C-A **
15987570-C-A 13875690-C-A **
15999829-C-A 13887949-C-A **
15999909-T-C 13888029-T-C **
15777125-G-T 13665245-G-T **
16008418-G-T 13896538-G-T **
16041318-A-G 13929438-A-G **
16090636-G-T 13978756-G-T **
16116294-A-G 14004414-A-G P8_Prx **
16181256-G-C 14069376-G-C **
16241633-T-C 14129753-T-C **
16270380-T-A 14158500-T-A **
16274296-T-C 14162416-T-C **
16277907-G-T 14166027-G-T **
16319435-C-T 14207555-C-T **
15788242-G-T 13676362-G-T **
15763963-G-A 13652083-G-A **
16480055-A-G 14368175-A-G **
15367136-T-G 13255256-T-G **
15049393-G-A 12937484-G-A **
15070498-C-A 12958589-C-A **
15180155-T-C 13068241-T-C **
15278827-T-C 13166926-T-C **
15278878-T-C 13166977-T-C **
15288904-G-T 13177003-G-T **
4951535-T-C 5083494-T-C **
15288923-C-T 13177022-C-T **
15315480-T-A 13203586-T-A **
15332335-C-A 13220453-C-A **
15419980-A-C 13308100-A-C **
15753171-T-G 13641291-T-G **
15423391-C-T 13311511-C-T **
15427579-A-G 13315699-A-G **
15475049-T-A 13363169-T-A **
15542074-C-A 13430194-C-A **
15605516-A-G 13493636-A-G **
15657231-C-G 13545351-C-G **
15669932-C-A 13558052-C-A **
15684717-C-A 13572837-C-A **
15733701-T-A 13621821-T-A **
15740939-G-T 13629059-G-T **
16342340-A-T 14230460-A-T **
16503318-G-T 14391438-G-T **
18937367-A-G 16825487-A-G **
18554378-G-T 16442498-G-T **
17840463-G-T 15728583-G-T **
17886316-C-A 15774436-C-A **
17916383-A-G 15804503-A-G **
18108689-C-G 15996809-C-G **
18190233-T-G 16078353-T-G **
18223880-A-G 16112000-A-G **
18256216-G-A 16144336-G-A **
18263832-G-A 16151952-G-A **
18328807-G-A 16216927-G-A P6_Prx **
18403233-G-A 16291353-G-A P6_Gap **
18569666-G-T 16457786-G-T **
17620085-C-G 15508205-C-G **
18625972-G-C 16514092-G-C **
18625985-C-T 16514105-C-T **
18628135-G-T 16516255-G-T **
18701808-G-A 16589928-G-A **
18728715-T-C 16616835-T-C **
18752924-C-T 16641044-C-T **
18819238-T-G 16707358-T-G **
18890849-G-T 16778969-G-T **
18905160-C-A 16793280-C-A **
18905455-A-T 16793575-A-T **
17812160-T-C 15700280-T-C **
17572068-C-A 15460188-C-A **
16588197-A-C 14476317-A-C **
16729225-A-T 14617345-A-T **
16588206-G-T 14476326-G-T **
16588341-C-A 14476461-C-A **
16605306-C-A 14493426-C-A **
16621304-G-A 14509424-G-A **
16678464-C-A 14566584-C-A **
16703371-G-T 14591491-G-T **
16703379-G-T 14591499-G-T **
16703889-T-G 14592009-T-G **
16729193-T-G 14617313-T-G **
16729215-A-G 14617335-A-G **
16842945-T-G 14731065-T-G **
17503762-AT-A 15391882-AT-A **
16874916-C-A 14763036-C-A **
17177262-T-G 15065382-T-G **
17215573-C-G 15103693-C-G **
17215665-T-A 15103785-T-A **
17224338-T-G 15112458-T-G **
17310964-A-T 15199084-A-T **
17355641-C-A 15243761-C-A **
17363003-A-C 15251123-A-C **
17374880-C-T 15263000-C-T **
17403839-T-C 15291959-T-C **
4969968-T-C 5101927-T-C **
5219335-GAGT-G 5351294-GAGT-G **
4900940-G-T 5032899-G-T **
11653096-N-A **
11653088-N-G **
11653089-N-C **
11653090-N-C **
11653091-N-T **
11653092-N-T **
11653093-N-G **
11653094-N-G **
11653095-N-A **
11653097-N-T **
11653086-N-G **
11653098-N-C **
11653099-N-A **
11653100-N-A **
11653101-N-A **
11653102-N-TGCTATGTAATCAATTAGAAAGGAAAGGAATGCAATTGAGTGGA **
2738749-C-T 2870708-C-T **
13963918-C-T 11843212-C-T **
16729213-A-T 14617333-A-T **
6541012-C-A 6672971-C-A **
11653087-N-T **
11653085-N-A **
56858744-T-A **
11653072-N-G **
10994388-A-T **
11653065-N-A **
11653066-N-T **
11653067-N-A **
11653068-N-G **
11653069-N-C **
11653070-N-A **
11653071-N-A **
11653073-N-G **
11653084-N-G **
11653074-N-T **
11653075-N-A **
11653077-N-T **
11653078-N-T **
11653079-N-G **
11653080-N-T **
11653081-N-T **
11653082-N-T **
11653083-N-C **
23802428-C-T 21640542-C-T **
5845964-G-T 5977923-G-T **
10943126-G-C **
3649124-GA-G 3781083-GA-G 9×A**
15157887-T-A 13045973-T-A **
18184939-C-A 16073059-C-A **
7306395-C-A 7438354-C-A **
10809292-G-T **
15848742-C-A 13736862-C-A **
11031470-C-A **
7214469-C-A 7346428-C-A **
9013257-C-A 9175648-C-A 18×A**
22113186-TC-T 19951300-TC-T **
21405832-C-G 19243946-C-G 15×A**
10015014-G-A 10177405-G-A **
27966835-G-T 25820688-G-T P1_Y2 **
27889360-C-CCA 25743213-C-CCA P1_Y2 **
16116374-A-AT 14004494-A-AT P8_Prx **
10824211-C-T **
10885261-C-A **
5219323-A-T 5351282-A-T **
3550575-A-C 3682534-A-C **
10827006-G-T **
27507463-G-T 25361316-G-T P1_Y2 **
18997080-C-A 16885200-C-A Y103304 **
27952160-G-T 25806013-G-T P1_Y2 **
15832216-CTTT-C 13720336-CTTT-C 22×T**
21617738-C-A 19455852-C-A **
7016-A-C **
13502038-C-A 11346362-C-A **
13217145-C-A 11061469-C-A **
10664714-C-A **
14835312-A-T 12723379-A-T **
9397993-C-A 9560384-C-A **
19067943-C-A 16956063-C-A **
10677053-T-TTC **
11024391-G-C **
14776923-CAAA-C 12664992-CAAA-C 15×A**
28745111-C-A 26598964-C-A **
27966828-G-T 25820681-G-T P1_Y2 **
6816732-AG-A 6948691-AG-A **
20432868-A-ACT 18270982-A-ACT P5_Dst **
6775255-C-A 6907214-C-A **
19067988-C-A 16956108-C-A FGC27175 **
4863429-A-C 4995388-A-C **
20727693-T-TA 18565807-T-TA P4_Prx **
10994378-G-C **
10879643-C-A **
11018692-T-C **
16729206-G-T 14617326-G-T **
14835327-A-T 12723394-A-T FGC29770 14×T**
13461084-T-G 11305408-T-G **
17019613-GAAAAC-G 14907733-GAAAAC-G 6×AAAAC**
6808134-C-CA 6940093-C-CA 22×A**
4123943-A-AAAGG 4255902-A-AAAGG 8×AAGG**
3679659-A-AAAATAAAT 3811618-A-AAAATAAAT 10×AAAT**
24729735-A-C 22583588-A-C P3_b2 **
28680956-CA-C 26534809-CA-C 14×A**
9799174-C-A 9961565-C-A **
16164473-C-A 14052593-C-A P8_Dst **
4908014-TA-T 5039973-TA-T 9×A**
8854214-C-A 8986173-C-A **
10971978-A-G **
10987989-A-T **
10987991-A-T **
21515846-G-A 19353960-G-A **
10984437-C-T **
10984451-T-A **
10984482-C-A **
10015025-A-C 10177416-A-C **
16164452-C-A 14052572-C-A P8_Dst **
10984514-A-G **
6792647-G-A 6924606-G-A **
13461026-G-A 11305350-G-A **
18108700-C-A 15996820-C-A **
16729194-TGC-T 14617314-TGC-T **
6792655-G-A 6924614-G-A **
10015035-T-C 10177426-T-C **
18086661-AT-A 15974781-AT-A 10×T**
21049270-T-C 18887384-T-C **
5937238-CTCTCTATA-C 6069197-CTCTCTATA-C **
7252391-AC-A 7384350-AC-A **
21515841-C-G 19353955-C-G **
19407593-A-T 17295713-A-T **
23802418-G-A 21640532-G-A **
27877515-T-TTAA 25731368-T-TTAA P1_Y2 11×TAA**
27889347-AGC-A 25743200-AGC-A P1_Y2 **
14311874-TTTA-T 12191168-TTTA-T 6×TTA**
14339093-C-T 12218388-C-T **
15477309-AG-A 13365429-AG-A **
18728720-AG-A 16616840-AG-A **
17597763-C-A 15485883-C-A **
10984486-C-T **
10984540-C-T **
10976193-C-A **
22052621-C-A 19890735-C-A **
10755724-C-T **
15997425-C-A 13885545-C-A **
2805549-AAAG-A 2937508-AAAG-A **
10954085-C-G **
10954098-C-T **
10667024-C-A **
10994377-C-A **
21072378-C-A 18910492-C-A **
10755687-C-G **
10882015-C-CCTTCA **
10755700-A-T **
10755710-T-A **
10755733-A-G **
10846685-T-C **
14294337-T-A 12173631-T-A **
13461062-G-A 11305386-G-A **
20755616-C-A 18593730-C-A P4_Prx **
10094357-C-A 10256748-C-A **
18728703-C-A 16616823-C-A **
10755716-C-T **
21138731-C-A 18976845-C-A **
21863956-C-A 19702070-C-A **
11026036-T-A **
23807562-C-A 21645676-C-A **
10877849-A-T **
13242845-G-A 11087169-G-A **
28632874-C-A 26486727-C-A **
21515858-G-C 19353972-G-C **
19600462-G-A 17488582-G-A P5_Prx **
11025983-C-G **
11026020-C-G **
11026025-C-T **
11026037-C-T **
10667004-C-T **
22703591-GTC-G 20541705-GTC-G **
22783157-T-A 20621271-T-A S24682 **
10954058-C-T **
28555459-C-A 26409312-C-A **
10954051-G-T **
10765650-G-A **
11025974-ATTT-A **
16164442-C-A 14052562-C-A BY46540 P8_Dst **
17295952-C-A 15184072-C-A Y98704 **
10888085-T-A **
14160257-G-T 12039551-G-T **
11018694-G-T **
3651564-G-T 3783523-G-T **
15111461-A-G 12999548-A-G **
15912143-T-C 13800263-T-C **
10959391-A-C **
6776081-C-A 6908040-C-A **
17831061-C-A 15719181-C-A **
10813059-C-A **
23127583-C-A 20965697-C-A **
11018696-C-T **
10879701-T-C **
15081268-C-A 12969358-C-A **
13554593-C-A 11398917-C-A **
19274785-TTA-T 17162905-TTA-T **
14312192-C-A 12191486-C-A **
23426959-C-A 21265073-C-A **
14483542-C-T 12362811-C-T **
10941825-A-T **
10667009-C-GGTTTA **
16228126-A-G 14116246-A-G **
58990783-A-C 56844636-A-C **
10653803-C-A **
3272570-C-A 3404529-C-A **
10845561-C-A **
10845567-C-G **
10976044-T-G **
4282039-C-A 4413998-C-A **
3603369-C-A 3735328-C-A **
14557423-G-T 12445624-G-T **
4070167-A-C 4202126-A-C **
2803632-C-A 2935591-C-A **
5249117-C-A 5381076-C-A **
3783697-G-T 3915656-G-T **
3343181-C-A 3475140-C-A **
10660279-A-T **
56822359-G-T **
4069630-A-C 4201589-A-C **
10982648-T-C **
15174550-TA-T 13062636-TA-T 9×A**
16184327-A-T 14072447-A-T **
4002477-T-G 4134436-T-G **
22023225-A-G 19861339-A-G **
28719357-T-C 26573210-T-C **
13963903-A-T 11843197-A-T **
3436390-C-A 3568349-C-A **
3514076-G-T 3646035-G-T **
2795639-C-A 2927598-C-A **
2810391-A-TT 2942350-A-TT **
2855497-AT-A 2987456-AT-A **
2934095-ATT-A 3066054-ATT-A 15×T**
2948431-T-C 3080390-T-C **
3022578-G-T 3154537-G-T **
3109908-G-T 3241867-G-T **
3183852-G-T 3315811-G-T **
2768360-G-T 2900319-G-T **
3229629-A-T 3361588-A-T **
3274123-G-C 3406082-G-C **
3409169-C-T 3541128-C-T **
3274174-A-T 3406133-A-T **
3274177-A-G 3406136-A-G **
3274210-A-T 3406169-A-T **
3274296-A-T 3406255-A-T **
3287192-G-A 3419151-G-A **
2783648-A-G 2915607-A-G **
3545865-A-T 3677824-A-T **
3650847-C-G 3782806-C-G **
2738748-A-C 2870707-A-C **
16164474-C-CAAA 14052594-C-CAAA P8_Dst 19×A**
14835302-A-T 12723369-A-T **
56822532-G-T **
26834596-A-G 24688449-A-G P1_g2 **
15866807-C-A 13754927-C-A **
3636184-A-G 3768143-A-G **
10775236-C-A **
15070502-C-A 12958593-C-A **
6028347-G-T 6160306-G-T **
2738868-T-A 2870827-T-A **
28561750-G-T 26415603-G-T **
13216430-C-A 11060754-C-A **
3636183-G-C 3768142-G-C **
3636126-A-C 3768085-A-C **
2697607-G-C 2829566-G-C **
3628356-C-A 3760315-C-A **
3624075-G-C 3756034-G-C **
3608434-G-T 3740393-G-T **
14464243-G-T 12343516-G-T **
3367195-C-A 3499154-C-A **
5887592-C-A 6019551-C-A **
14178157-C-A 12057451-C-A **
13461055-G-C 11305379-G-C **
17503800-A-G 15391920-A-G **
13884133-C-A 11763427-C-A **
4426367-A-C 4558326-A-C **
4426282-C-T 4558241-C-T **
15252822-ACT-A 13140908-ACT-A **
10951028-C-G **
4426275-T-C 4558234-T-C **
28623378-C-A 26477231-C-A **
10949299-T-A **
8216571-A-AT 8348530-A-AT 9×T**
23789324-GTTT-G 21627438-GTTT-G 13×T**
21713468-T-C 19551582-T-C **
10967712-G-T **
7042929-C-A 7174888-C-A **
21422161-CA-C 19260275-CA-C **
15986556-C-A 13874676-C-A **
6183318-G-T 6315277-G-T IR3_Dst **
13821466-C-A 11700760-C-A **
10770677-C-G **
4713018-G-T 4844977-G-T **
10787233-C-A **
2810407-C-A 2942366-C-A **
10881864-T-C **
8568498-C-T 8700457-C-T **
11018932-C-A **
4733348-G-T 4865307-G-T **
22703577-G-A 20541691-G-A **
11025992-C-A **
2986438-C-A 3118397-C-A **
10889426-C-A **
10911739-A-T **
4672362-C-A 4804321-C-A **
10911758-G-T **
4618452-G-A 4750411-G-A **
4595669-A-T 4727628-A-T **
4501430-G-T 4633389-G-T **
4439527-A-C 4571486-A-C **
15626513-G-T 13514633-G-T **
4298708-G-T 4430667-G-T **
18243830-C-A 16131950-C-A **
23899408-GT-G 21737522-GT-G **
3736240-AT-A 3868199-AT-A 9×T**
21234819-C-A 19072933-C-A **
4172561-C-A 4304520-C-A **
3804759-AAAT-A 3936718-AAAT-A **
11013288-C-A **
21386302-C-A 19224416-C-A **
16409013-C-T 14297133-C-T 18×T**
28644445-C-A 26498298-C-A **
28555631-G-A 26409484-G-A **
5199684-C-A 5331643-C-A **
15252821-A-C 13140907-A-C **
13218989-A-G 11063313-A-G **
14581030-C-A 12469230-C-A **
4108269-T-C 4240228-T-C **
16041100-C-A 13929220-C-A **
18710228-C-A 16598348-C-A **
7541219-C-A 7673178-C-A **
4138430-C-T 4270389-C-T **
14835297-A-T 12723364-A-T **
24729751-A-C 22583604-A-C P3_b2 **
56828253-T-C **
5393277-A-G 5525236-A-G **
4148369-C-G 4280328-C-G **
14474439-C-A 12353708-C-A **
11653076-N-A **
5336813-G-T 5468772-G-T **
13919227-A-C 11798521-A-C **
7281928-C-A 7413887-C-A **
23350647-TG-T 21188761-TG-T **
13143374-A-C 10632860-A-C ***
13452873-G-GCATTC 11297197-G-GCATTC 14×CATTC***
7307494-T-TAG 7439453-T-TAG 11×AG***
56839045-C-A ***
13194870-C-T 11039194-C-T ***
19048926-T-A 16937046-T-A ***
20001266-C-T 17889386-C-T P5_Prx ******
28789480-A-G 26643333-A-G BY55569 ***
9330605-A-G 9492996-A-G ***
58982953-G-T 56836806-G-T ***
28773581-C-T 26627434-C-T ***
24751507-G-T 22605360-G-T P3_b2 ***
25720205-A-G 23574058-A-G P1_b3 ***
18763554-GTGTA-G 16651674-GTGTA-G 6×TGTA***
23435202-C-CTT 21273316-C-CTT ***
14331156-TGC-T 12210450-TGC-T ***
23855713-C-A 21693827-C-A ***
8182228-C-A 8314187-C-A ***
23869909-G-T 21708023-G-T ***
13143335-C-G 10632821-C-G ***
13487776-G-C 11332100-G-C ***
24373054-C-A 22226907-C-A ***
28588942-C-A 26442795-C-A ***
22100778-G-C 19938892-G-C ***
22463944-A-C 20302058-A-C DYZ19 ***
22252587-G-T 20090701-G-T DYZ19 ***
14392735-CTTTT-C 12272031-CTTTT-C 17×T***
15051575-CATTT-C 12939666-CATTT-C 6×ATTT***
22562476-A-G 20400590-A-G ***
26286053-G-T 24139906-G-T P1_Y1 ***
16427403-C-A 14315523-C-A BY107705 ***
26262615-T-A 24116468-T-A P1_Y1 ***
21617509-C-A 19455623-C-A ***
9959863-T-TAACAA 10122254-T-TAACAA 7×TAA***
13452340-TCCATTCCATTCCATTCCA-T 11296664-TCCATTCCATTCCATTCCA-T ***
13412074-C-A 11256398-C-A ***
15936698-G-T 13824818-G-T ***
16707092-C-A 14595212-C-A ***
13212647-C-A 11056971-C-A ***
10932640-C-T ***
10962890-C-A ***
10967513-C-CATTATGGATG ***
3833642-G-A 3965601-G-A ***
56742698-A-T ***
17479410-T-A 15367530-T-A ***
2970399-C-A 3102358-C-A ***
11030162-CCAAT-C,CCACT ***
7165289-G-T 7297248-G-T ***
10746921-TCC-T,TACAATTC ***
14686027-T-C 12574093-T-C ***
17343815-T-C 15231935-T-C ***
14607809-G-C 12496011-G-C ***
7113228-A-C 7245187-A-C ***
19337658-G-A 17225778-G-A ***
14945826-GT-G 12833900-GT-G 10×T***
14450564-C-A 12329837-C-A ***
14367621-G-A 12246917-G-A ***
14316136-G-T 12195430-G-T ***
14768087-CA-C,CAA 12656156-CA-C,CAA 12×A***
11677618-A-G ***
9313806-C-A 9476197-C-A ***
21265128-C-A 19103242-C-A ***
14102051-T-A 11981345-T-A ***
22896215-G-A 20734329-G-A ***
19321424-C-A 17209544-C-A ***
10835500-A-ACCATT ***
10657401-A-T ***
18039579-G-GT 15927699-G-GT 9×T***
10746965-TTCA-T ***
2882913-C-T 3014872-C-T 12×T***
16909213-G-T 14797333-G-T ***
21324150-T-G 19162264-T-G ***
13939027-C-A 11818321-C-A ***
21244105-C-A 19082219-C-A ***
21201309-CT-C 19039423-CT-C ***
7142600-G-A 7274559-G-A ***
5313421-C-A 5445380-C-A ***
28633534-C-A 26487387-C-A ***
10794339-G-T ***
10895786-A-T ***
2819960-CTTTT-C 2951919-CTTTT-C 17×T***
7879464-T-TC 8011423-T-TC ***
6516394-C-A 6648353-C-A ***
10662394-T-C ***
6979859-C-A 7111818-C-A ***
7991027-C-A 8122986-C-A ***
16424467-C-T 14312587-C-T ***
19271251-C-A 17159371-C-A ***
15956769-A-AT 13844889-A-AT 12×T***
10895838-C-T ***
10973902-C-G ***
9959883-A-AAT 10122274-A-AAT ***
10671485-C-CACTCCACT ***
10677219-C-T ***
11656306-G-T ***
10765731-C-A ***
10967527-C-G ***
10671998-T-A,C ***
8100215-CT-C 8232174-CT-C 11×T******

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 5360421072156277736107856996
Kit: 536042973953279232057812030
Used in age calculations1072156279232057856996
Counts of SNPs44
Variant counts last updated 2018-06-18 21:16:10.



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