Lennon
FTDNA: 326979, BigY2: 326979Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 326979 | BigY2 326979 |
---|---|---|---|---|---|---|---|---|---|
20613210-T-C | 18451324-T-C | P4_Prx | *** | A* | |||||
6773499-TTC-T | 6905458-TTC-T | + | |||||||
16808847-A-T | 14696967-A-T | BY18233 | Y | Y | + | + | |||
20837845-T-A | 18675959-T-A | Y105262 | P4_Gap | + | + | ||||
22475376-TG-T | 20313490-TG-T | DYZ19 | + | + | |||||
22511827-T-C | 20349941-T-C | BY225780 | DYZ19 | *** | + | ||||
22718910-T-C | 20557024-T-C | Y109551 | Y | Y | + | + | |||
22440131-A-T | 20278245-A-T | BY46362 | DYZ19 | *** | * | ||||
13455059-GCATTCCATTCCATTC-G | 11299383-GCATTCCATTCCATTC-G | 9×CATTC | * | ||||||
22312564-T-A | 20150678-T-A | FT455645 | DYZ19 | *** | * | ||||
22462360-A-C | 20300474-A-C | DYZ19 | *** | * | |||||
9958341-GGGAGCACATTTAA-G,GGGATCACATTTAA | 10120732-GGGAGCACATTTAA-G,GGGATCACATTTAA | * | |||||||
8075929-A-T | 8207888-A-T | ** | |||||||
13919225-AG-A | 11798519-AG-A | ** | |||||||
21297390-C-A | 19135504-C-A | Y4974 FGC18291 | ** | ||||||
15530159-C-T | 13418279-C-T | PR5558 | ** | ||||||
8075934-G-T | 8207893-G-T | FT228620 | ** | ||||||
7195245-G-A | 7327204-G-A | ** | |||||||
15823850-C-A | 13711970-C-A | ** | |||||||
20975190-T-G | 18813304-T-G | P4_Dst | ** | ||||||
23199777-C-A | 21037891-C-A | ** | |||||||
18573547-C-A | 16461667-C-A | ** | |||||||
4703711-C-A | 4835670-C-A | ** | |||||||
14390665-C-T | 12269961-C-T | ** | |||||||
15176488-C-A | 13064574-C-A | ** | |||||||
7645429-C-A | 7777388-C-A | ** | |||||||
18959204-G-A | 16847324-G-A | ** | |||||||
10985079-T-C | ** | ||||||||
10803959-T-A | ** | ||||||||
10837808-ATCCATTCCAT-A | ** | ||||||||
11007294-C-A | ** | ||||||||
17218285-G-T | 15106405-G-T | ** | |||||||
17218287-A-T | 15106407-A-T | ** | |||||||
28711953-C-G | 26565806-C-G | ** | |||||||
28711955-G-A | 26565808-G-A | ** | |||||||
3158901-C-A | 3290860-C-A | ** | |||||||
17199497-AT-A | 15087617-AT-A | 8×T | ** | ||||||
14727351-T-G | 12615419-T-G | ** | |||||||
16017686-C-A | 13905806-C-A | ** | |||||||
7702010-C-A | 7833969-C-A | ** | |||||||
14553218-C-A | 12441419-C-A | ** | |||||||
21672256-C-A | 19510370-C-A | ** | |||||||
25990664-C-T | 23844517-C-T | P1_Y1 | ** | ||||||
14441967-C-A | 12321240-C-A | ** | |||||||
15333525-G-T | 13221643-G-T | ** | |||||||
17504952-C-A | 15393072-C-A | FT425448 | ** | ||||||
10018091-C-A | 10180482-C-A | ** | |||||||
9968366-G-A | 10130757-G-A | ** | |||||||
14926452-G-A | 12814517-G-A | ** | |||||||
6454563-C-A | 6586522-C-A | ** | |||||||
17775074-C-A | 15663194-C-A | ** | |||||||
19979866-T-TG | 17867986-T-TG | P5_Prx | ** | ||||||
20840788-A-G | 18678902-A-G | P4_Gap | ** | ||||||
9979253-C-A | 10141644-C-A | ** | |||||||
10654114-T-C | ** | ||||||||
2665622-C-A | 2797581-C-A | ** | |||||||
18059781-C-A | 15947901-C-A | ** | |||||||
28658399-C-A | 26512252-C-A | ** | |||||||
10792997-T-C | FT431422 | ** | |||||||
13213957-A-G | 11058281-A-G | ** | |||||||
3033106-A-AT | 3165065-A-AT | 9×T | ** | ||||||
8314319-A-AT | 8446278-A-AT | ** | |||||||
10860261-C-A | ** | ||||||||
3033052-C-A | 3165011-C-A | ** | |||||||
21138616-C-A | 18976730-C-A | ** | |||||||
18959293-T-A | 16847413-T-A | ** | |||||||
11656879-A-C | DYZ17 | ** | |||||||
14513970-C-A | 12402175-C-A | ** | |||||||
7200557-A-T | 7332516-A-T | ** | |||||||
5316887-C-A | 5448846-C-A | ** | |||||||
23185980-C-T | 21024094-C-T | 13×T | ** | ||||||
23272284-G-T | 21110398-G-T | ** | |||||||
4887880-C-A | 5019839-C-A | ** | |||||||
13973219-C-A | 11852513-C-A | ** | |||||||
10977093-C-T | ** | ||||||||
23185976-G-T | 21024090-G-T | ** | |||||||
16244910-C-A | 14133030-C-A | ** | |||||||
10981403-C-A | ** | ||||||||
56861718-A-G | ** | ||||||||
56861732-G-A | ** | ||||||||
16220708-C-A | 14108828-C-A | FTA18966 | ** | ||||||
16471522-C-A | 14359642-C-A | ** | |||||||
5601045-C-A | 5733004-C-A | ** | |||||||
26440618-A-T | 24294471-A-T | P1_Y1 | ** | ||||||
6293373-G-GT | 6425332-G-GT | IR3_Dst | ** | ||||||
7275083-C-A | 7407042-C-A | ** | |||||||
8739060-C-A | 8871019-C-A | ** | |||||||
9765915-A-C | 9928306-A-C | ** | |||||||
14754095-G-TT | 12642164-G-TT | ** | |||||||
3409857-C-A | 3541816-C-A | ** | |||||||
21488859-C-A | 19326973-C-A | ** | |||||||
21769953-C-A | 19608067-C-A | ** | |||||||
23475765-T-C | 21313879-T-C | ** | |||||||
16437387-C-A | 14325507-C-A | ** | |||||||
15612245-T-A | 13500365-T-A | ** | |||||||
17584177-C-T | 15472297-C-T | ** | |||||||
19961804-T-TG | 17849924-T-TG | P5_Prx | ** | ||||||
10986506-C-A | ** | ||||||||
7409448-C-T | 7541407-C-T | ** | |||||||
15131962-C-A | 13020049-C-A | ** | |||||||
6626840-C-A | 6758799-C-A | ** | |||||||
20433660-G-T | 18271774-G-T | P5_Dst | ** | ||||||
21522201-A-G | 19360315-A-G | ** | |||||||
13612009-C-T | 11456333-C-T | ** | |||||||
8902027-C-A | 9033986-C-A | ** | |||||||
13258558-C-T | 11102882-C-T | 20×T | ** | ||||||
6576643-C-A | 6708602-C-A | ** | |||||||
28779760-C-A | 26633613-C-A | ** | |||||||
8902035-C-A | 9033994-C-A | ** | |||||||
10840014-A-C | ** | ||||||||
28774447-C-A | 26628300-C-A | ** | |||||||
11653736-G-A | DYZ17 | ** | |||||||
6646863-C-A | 6778822-C-A | ** | |||||||
21617661-C-A | 19455775-C-A | ** | |||||||
5358667-C-A | 5490626-C-A | ** | |||||||
10037931-C-A | 10200322-C-A | ** | |||||||
10671752-C-A | ** | ||||||||
4261812-C-A | 4393771-C-A | ** | |||||||
9474121-G-T | 9636512-G-T | ** | |||||||
15648760-C-A | 13536880-C-A | ** | |||||||
5846953-C-A | 5978912-C-A | ** | |||||||
20280159-CT-C | 18118273-CT-C | P5_Dst | ** | ||||||
9482223-C-A | 9644614-C-A | ** | |||||||
24389925-C-A | 22243778-C-A | ** | |||||||
56838911-T-A | ** | ||||||||
56838954-A-C | ** | ||||||||
56838964-A-G | ** | ||||||||
56839002-G-A | ** | ||||||||
56839008-GT-G | ** | ||||||||
56839017-C-A | ** | ||||||||
22855085-A-T | 20693199-A-T | ** | |||||||
21919402-TTC-T | 19757516-TTC-T | ** | |||||||
15431631-C-A | 13319751-C-A | ** | |||||||
10770695-C-A | ** | ||||||||
6690244-C-A | 6822203-C-A | ** | |||||||
3995209-A-C | 4127168-A-C | ** | |||||||
10057921-C-G | 10220312-C-G | ** | |||||||
17465099-C-A | 15353219-C-A | YP3214 FGC26876 | ** | ||||||
7335760-G-A | 7467719-G-A | ** | |||||||
9927590-G-A | 10089981-G-A | ** | |||||||
27585943-G-A | 25439796-G-A | P1_Y2 | ** | ||||||
13234594-C-A | 11078918-C-A | ** | |||||||
10969105-A-C | ** | ||||||||
2928442-C-A | 3060401-C-A | ** | |||||||
2970087-T-A | 3102046-T-A | ** | |||||||
3015910-G-A | 3147869-G-A | ** | |||||||
3130598-C-A | 3262557-C-A | ** | |||||||
3327807-A-G | 3459766-A-G | ** | |||||||
3329192-A-C | 3461151-A-C | ** | |||||||
3389620-C-T | 3521579-C-T | ** | |||||||
3561020-A-T | 3692979-A-T | ** | |||||||
3612769-G-T | 3744728-G-T | ** | |||||||
3706393-C-A | 3838352-C-A | ** | |||||||
3912925-A-G | 4044884-A-G | ** | |||||||
3993130-C-A | 4125089-C-A | ** | |||||||
4069450-T-G | 4201409-T-G | ** | |||||||
4107871-A-G | 4239830-A-G | ** | |||||||
4136539-C-T | 4268498-C-T | ** | |||||||
4138545-G-T | 4270504-G-T | ** | |||||||
4168252-C-A | 4300211-C-A | FT387679 | ** | ||||||
4173629-C-A | 4305588-C-A | ** | |||||||
4212476-C-A | 4344435-C-A | ** | |||||||
4244565-C-T | 4376524-C-T | ** | |||||||
4271311-G-T | 4403270-G-T | ** | |||||||
4272528-G-C | 4404487-G-C | ** | |||||||
4295532-T-G | 4427491-T-G | ** | |||||||
4466748-C-A | 4598707-C-A | ** | |||||||
4538396-TA-T | 4670355-TA-T | ** | |||||||
4687557-G-A | 4819516-G-A | ** | |||||||
4898470-T-C | 5030429-T-C | FT141718 | ** | ||||||
4898622-C-A | 5030581-C-A | ** | |||||||
5100114-C-A | 5232073-C-A | ** | |||||||
5107928-A-G | 5239887-A-G | ** | |||||||
5205767-T-A | 5337726-T-A | ** | |||||||
5216475-A-G | 5348434-A-G | ** | |||||||
5216612-T-C | 5348571-T-C | ** | |||||||
5220957-C-A | 5352916-C-A | ** | |||||||
5274350-C-T | 5406309-C-T | ** | |||||||
5335275-T-A | 5467234-T-A | ** | |||||||
5358964-G-T | 5490923-G-T | ** | |||||||
5409512-G-A | 5541471-G-A | FT379109 | ** | ||||||
5459275-G-A | 5591234-G-A | ** | |||||||
5524542-C-T | 5656501-C-T | ** | |||||||
5525861-G-T | 5657820-G-T | ** | |||||||
5586644-G-C | 5718603-G-C | FGC67460 | ** | ||||||
5644480-C-A | 5776439-C-A | ** | |||||||
5645132-T-C | 5777091-T-C | ** | |||||||
5760342-A-G | 5892301-A-G | ** | |||||||
5844601-A-C | 5976560-A-C | ** | |||||||
5873560-C-A | 6005519-C-A | ** | |||||||
5969689-G-C | 6101648-G-C | ** | |||||||
6040241-G-A | 6172200-G-A | ** | |||||||
6064073-T-A | 6196032-T-A | ** | |||||||
6130202-G-A | 6262161-G-A | ** | |||||||
6130203-A-G | 6262162-A-G | ** | |||||||
6356204-C-A | 6488163-C-A | ** | |||||||
6444492-C-A | 6576451-C-A | ** | |||||||
6454631-A-C | 6586590-A-C | ** | |||||||
6471735-G-T | 6603694-G-T | ** | |||||||
6492554-G-C | 6624513-G-C | ** | |||||||
6510810-T-G | 6642769-T-G | ** | |||||||
6626766-T-C | 6758725-T-C | ** | |||||||
6654584-C-A | 6786543-C-A | ** | |||||||
6694142-C-A | 6826101-C-A | ** | |||||||
6773140-C-A | 6905099-C-A | ** | |||||||
6775211-C-A | 6907170-C-A | ** | |||||||
6799122-G-A | 6931081-G-A | ** | |||||||
6806783-T-C | 6938742-T-C | ** | |||||||
6833330-C-A | 6965289-C-A | ** | |||||||
6892204-C-G | 7024163-C-G | ** | |||||||
7001425-G-C | 7133384-G-C | ** | |||||||
7038629-T-C | 7170588-T-C | ** | |||||||
7052825-G-A | 7184784-G-A | Y83237 | ** | ||||||
7053800-T-C | 7185759-T-C | ** | |||||||
7081678-A-C | 7213637-A-C | ** | |||||||
7085551-C-T | 7217510-C-T | FTA35620 | ** | ||||||
7085599-C-T | 7217558-C-T | ** | |||||||
7098497-C-A | 7230456-C-A | ** | |||||||
7140497-G-A | 7272456-G-A | ** | |||||||
7155369-TG-T | 7287328-TG-T | ** | |||||||
7157985-C-A | 7289944-C-A | ** | |||||||
7165614-T-C | 7297573-T-C | ** | |||||||
7165701-A-T | 7297660-A-T | ** | |||||||
7165716-C-T | 7297675-C-T | ** | |||||||
7254812-C-T | 7386771-C-T | ** | |||||||
7288170-T-A | 7420129-T-A | ** | |||||||
7306695-A-G | 7438654-A-G | ** | |||||||
7330248-C-A | 7462207-C-A | ** | |||||||
7339836-A-G | 7471795-A-G | ** | |||||||
7428251-C-A | 7560210-C-A | ** | |||||||
7670919-A-T | 7802878-A-T | ** | |||||||
7670960-G-C | 7802919-G-C | ** | |||||||
7699204-G-A | 7831163-G-A | ** | |||||||
7706368-C-A | 7838327-C-A | ** | |||||||
7723479-A-G | 7855438-A-G | ** | |||||||
7757158-G-T | 7889117-G-T | ** | |||||||
7821147-C-A | 7953106-C-A | ** | |||||||
7970293-C-A | 8102252-C-A | ** | |||||||
8668391-C-A | 8800350-C-A | ** | |||||||
8673785-C-A | 8805744-C-A | ** | |||||||
8811268-T-C | 8943227-T-C | ** | |||||||
9112872-T-C | ** | ||||||||
8980061-G-T | 9142452-G-T | ** | |||||||
9063389-C-T | 9225780-C-T | ** | |||||||
9482145-C-A | 9644536-C-A | ** | |||||||
9509690-C-A | 9672081-C-A | ** | |||||||
9822749-AGT-A | 9985140-AGT-A | ** | |||||||
9885106-C-A | 10047497-C-A | ** | |||||||
9956804-A-T | 10119195-A-T | ** | |||||||
10050886-T-C | 10213277-T-C | ** | |||||||
10069425-C-T | 10231816-C-T | ** | |||||||
10653055-A-C | ** | ||||||||
10744203-A-T | ** | ||||||||
10744589-C-G | ** | ||||||||
10748064-TCCATTGC-T | ** | ||||||||
10760561-T-G | ** | ||||||||
10774933-A-C | ** | ||||||||
10774936-A-T | ** | ||||||||
10778065-C-A | ** | ||||||||
10791267-A-T | ** | ||||||||
10795052-C-A | ** | ||||||||
10803492-A-T | ** | ||||||||
10803956-C-A | ** | ||||||||
10804761-A-T | ** | ||||||||
10834981-T-C | ** | ||||||||
10834983-T-C | ** | ||||||||
10840015-T-C | ** | ||||||||
10842121-T-C | ** | ||||||||
10861577-C-A | ** | ||||||||
10861642-C-A | ** | ||||||||
10878149-C-A | ** | ||||||||
10884440-T-G | FT435494 | ** | |||||||
10884671-C-A | ** | ||||||||
10929120-T-A | ** | ||||||||
10929311-C-A | ** | ||||||||
10936350-T-C | ** | ||||||||
10940710-T-C | ** | ||||||||
10954370-C-A | ** | ||||||||
10974882-C-A | ** | ||||||||
10985759-T-C | ** | ||||||||
10989036-C-A | ** | ||||||||
11014844-A-G | ** | ||||||||
11018082-C-A | ** | ||||||||
11037802-G-C | ** | ||||||||
13206871-G-T | 11051195-G-T | ** | |||||||
13222073-A-G | 11066397-A-G | ** | |||||||
13227241-T-TA | 11071565-T-TA | ** | |||||||
13227249-C-CA | 11071573-C-CA | ** | |||||||
13236306-G-T | 11080630-G-T | ** | |||||||
13259165-G-T | 11103489-G-T | ** | |||||||
13309656-C-A | 11153980-C-A | ** | |||||||
13323390-G-A | 11167714-G-A | ** | |||||||
13476329-C-G | 11320653-C-G | ** | |||||||
11670178-C-A | DYZ17 | ** | |||||||
11673773-A-G | DYZ17 | ** | |||||||
13902912-CA-C | 11782206-CA-C | ** | |||||||
13919231-T-A | 11798525-T-A | ** | |||||||
13927108-C-T | 11806402-C-T | ** | |||||||
13945206-C-A | 11824500-C-A | ** | |||||||
13952612-C-A | 11831906-C-A | ** | |||||||
13960908-C-A | 11840202-C-A | ** | |||||||
13960914-T-A | 11840208-T-A | ** | |||||||
13989053-A-G | 11868347-A-G | ** | |||||||
14036164-T-C | 11915458-T-C | ** | |||||||
14067028-G-A | 11946322-G-A | ** | |||||||
14093564-C-A | 11972858-C-A | FT350735 | ** | ||||||
14153193-C-A | 12032487-C-A | ** | |||||||
14216248-C-A | 12095542-C-A | ** | |||||||
14219515-A-G | 12098809-A-G | ** | |||||||
14242002-A-C | 12121296-A-C | ** | |||||||
14261390-T-C | 12140684-T-C | ** | |||||||
14284706-T-C | 12164000-T-C | ** | |||||||
14380180-C-A | 12259476-C-A | ** | |||||||
14430538-A-AG | 12309811-A-AG | ** | |||||||
14474725-G-T | 12353994-G-T | ** | |||||||
14501843-T-A | 12390048-T-A | ** | |||||||
14531112-A-G | 12419313-A-G | ** | |||||||
14569892-A-G | 12458092-A-G | ** | |||||||
14589143-C-T | 12477343-C-T | ** | |||||||
14610635-T-C | 12498837-T-C | 5×CTC | ** | ||||||
14613831-C-A | 12502029-C-A | ** | |||||||
14712392-G-T | 12600459-G-T | ** | |||||||
15041134-C-A | 12929224-C-A | ** | |||||||
15059766-C-A | 12947858-C-A | ** | |||||||
15060452-C-A | 12948544-C-A | ** | |||||||
15113643-C-A | 13001730-C-A | ** | |||||||
15131996-T-C | 13020083-T-C | ** | |||||||
15132006-T-C | 13020093-T-C | ** | |||||||
15137893-A-G | 13025980-A-G | ** | |||||||
15137956-G-T | 13026043-G-T | ** | |||||||
15172630-C-A | 13060716-C-A | ** | |||||||
15410570-C-A | 13298690-C-A | ** | |||||||
15410582-C-T | 13298702-C-T | ** | |||||||
15468461-G-A | 13356581-G-A | ** | |||||||
15496869-C-G | 13384989-C-G | ** | |||||||
15530111-A-T | 13418231-A-T | ** | |||||||
15530163-A-T | 13418283-A-T | ** | |||||||
15622654-C-A | 13510774-C-A | ** | |||||||
15630481-C-A | 13518601-C-A | ** | |||||||
15742381-T-A | 13630501-T-A | ** | |||||||
15755237-C-A | 13643357-C-A | ** | |||||||
15770781-C-A | 13658901-C-A | ** | |||||||
15773910-C-A | 13662030-C-A | FT67970 | ** | ||||||
15816433-A-G | 13704553-A-G | ** | |||||||
15923033-C-A | 13811153-C-A | ** | |||||||
15928542-A-G | 13816662-A-G | ** | |||||||
15944168-C-A | 13832288-C-A | ** | |||||||
15986679-T-C | 13874799-T-C | ** | |||||||
15995197-T-C | 13883317-T-C | ** | |||||||
16003275-G-T | 13891395-G-T | ** | |||||||
16027443-T-C | 13915563-T-C | ** | |||||||
16037434-C-T | 13925554-C-T | ** | |||||||
16058816-A-G | 13946936-A-G | ** | |||||||
16177150-A-C | 14065270-A-C | ** | |||||||
16211145-G-A | 14099265-G-A | ** | |||||||
16411345-C-A | 14299465-C-A | ** | |||||||
16427290-C-A | 14315410-C-A | ** | |||||||
16432754-C-T | 14320874-C-T | ** | |||||||
16467155-G-T | 14355275-G-T | ** | |||||||
16490844-A-G | 14378964-A-G | ** | |||||||
16506756-G-A | 14394876-G-A | ** | |||||||
16506765-TCA-T | 14394885-TCA-T | ** | |||||||
16526661-C-A | 14414781-C-A | ** | |||||||
16573801-A-G | 14461921-A-G | ** | |||||||
16777910-A-G | 14666030-A-G | ** | |||||||
17042935-T-C | 14931055-T-C | ** | |||||||
17043070-T-C | 14931190-T-C | ** | |||||||
17213254-C-A | 15101374-C-A | ** | |||||||
17374684-T-C | 15262804-T-C | ** | |||||||
17382459-C-A | 15270579-C-A | ** | |||||||
17644357-G-C | 15532477-G-C | ** | |||||||
17741394-T-C | 15629514-T-C | ** | |||||||
17903030-G-A | 15791150-G-A | ** | |||||||
17913028-C-A | 15801148-C-A | ** | |||||||
17923546-G-C | 15811666-G-C | ** | |||||||
17933696-T-A | 15821816-T-A | ** | |||||||
18159816-C-T | 16047936-C-T | FTB11990 | ** | ||||||
18271017-A-T | 16159137-A-T | FT6710 | ** | ||||||
18566034-T-C | 16454154-T-C | ** | |||||||
18682668-T-C | 16570788-T-C | ** | |||||||
18725053-C-G | 16613173-C-G | ** | |||||||
18753340-G-T | 16641460-G-T | ** | |||||||
18855836-G-T | 16743956-G-T | ** | |||||||
18864793-C-A | 16752913-C-A | FT210301 | ** | ||||||
18924907-C-A | 16813027-C-A | ** | |||||||
18948001-C-A | 16836121-C-A | ** | |||||||
19121874-T-G | 17009994-T-G | ** | |||||||
19129077-C-A | 17017197-C-A | ** | |||||||
19172918-AT-A | 17061038-AT-A | ** | |||||||
19202916-A-G | 17091036-A-G | ** | |||||||
19270576-C-A | 17158696-C-A | ** | |||||||
19436892-G-A | 17325012-G-A | ** | |||||||
19438606-G-A | 17326726-G-A | ** | |||||||
19575974-A-T | 17464094-A-T | P5_Prx | ** | ||||||
19732323-C-T | 17620443-C-T | P5_Prx | ** | ||||||
20568375-TA-T | 18406489-TA-T | P5_Dst | ** | ||||||
20568386-A-C | 18406500-A-C | P5_Dst | ** | ||||||
20568391-A-AT | 18406505-A-AT | P5_Dst | ** | ||||||
20840761-T-C | 18678875-T-C | P4_Gap | ** | ||||||
20840774-C-G | 18678888-C-G | P4_Gap | ** | ||||||
20840786-A-G | 18678900-A-G | P4_Gap | ** | ||||||
20840800-T-C | 18678914-T-C | P4_Gap | ** | ||||||
21048219-T-A | 18886333-T-A | ** | |||||||
21096162-C-A | 18934276-C-A | ** | |||||||
21208491-G-A | 19046605-G-A | ** | |||||||
21244188-G-C | 19082302-G-C | ** | |||||||
21276237-C-A | 19114351-C-A | ** | |||||||
21375713-C-A | 19213827-C-A | ** | |||||||
21495660-G-A | 19333774-G-A | ** | |||||||
21522216-C-T | 19360330-C-T | ** | |||||||
21624542-G-T | 19462656-G-T | ** | |||||||
21665666-C-A | 19503780-C-A | ** | |||||||
21888349-G-A | 19726463-G-A | FT89664 | ** | ||||||
21972266-G-T | 19810380-G-T | ** | |||||||
22130277-A-T | 19968391-A-T | ** | |||||||
22183060-G-A | 20021174-G-A | ** | |||||||
22204393-C-T | 20042507-C-T | ** | |||||||
22211524-C-A | 20049638-C-A | ** | |||||||
22436815-G-C | 20274929-G-C | DYZ19 | ** | ||||||
22535820-C-A | 20373934-C-A | ** | |||||||
22564693-A-G | 20402807-A-G | ** | |||||||
22602189-C-T | 20440303-C-T | ** | |||||||
22624848-G-T | 20462962-G-T | ** | |||||||
22689999-T-C | 20528113-T-C | ** | |||||||
22855103-G-C | 20693217-G-C | ** | |||||||
23029949-A-G | 20868063-A-G | ** | |||||||
23058552-T-A | 20896666-T-A | ** | |||||||
23206760-T-C | 21044874-T-C | ** | |||||||
23305765-A-G | 21143879-A-G | ** | |||||||
23439938-G-C | 21278052-G-C | ** | |||||||
23569982-C-A | 21408096-C-A | ** | |||||||
23773671-G-A | 21611785-G-A | ** | |||||||
23786584-A-T | 21624698-A-T | ** | |||||||
23818841-C-G | 21656955-C-G | ** | |||||||
21753355-T-C | ** | ||||||||
21754326-T-A | ** | ||||||||
21754402-C-G | ** | ||||||||
24264678-A-AC | 22118531-A-AC | P3_b1 | ** | ||||||
24364034-C-A | 22217887-C-A | ** | |||||||
24553586-T-C | 22407439-T-C | P3_t2 | ** | ||||||
25733089-A-T | 23586942-A-T | P1_b3 | ** | ||||||
26228723-A-G | 24082576-A-G | P1_Y1 | ** | ||||||
26400430-A-C | 24254283-A-C | P1_Y1 | ** | ||||||
26409895-A-G | 24263748-A-G | P1_Y1 | ** | ||||||
26440608-T-C | 24294461-T-C | P1_Y1 | ** | ||||||
26440619-G-C | 24294472-G-C | P1_Y1 | ** | ||||||
26440621-T-A | 24294474-T-A | P1_Y1 | ** | ||||||
26440629-C-G | 24294482-C-G | P1_Y1 | ** | ||||||
27762781-A-AAC | 25616634-A-AAC | P1_Y2 | ** | ||||||
27862506-A-C | 25716359-A-C | P1_Y2 | ** | ||||||
28591707-C-A | 26445560-C-A | ** | |||||||
28594404-C-A | 26448257-C-A | ** | |||||||
28622019-T-C | 26475872-T-C | ** | |||||||
28623558-C-A | 26477411-C-A | ** | |||||||
28660565-A-C | 26514418-A-C | ** | |||||||
28674893-T-C | 26528746-T-C | ** | |||||||
28711959-T-C | 26565812-T-C | ** | |||||||
28711960-G-A | 26565813-G-A | ** | |||||||
28711965-A-T | 26565818-A-T | ** | |||||||
28711976-T-C | 26565829-T-C | ** | |||||||
28719375-A-G | 26573228-A-G | ** | |||||||
28720753-T-A | 26574606-T-A | ** | |||||||
28778960-C-A | 26632813-C-A | ** | |||||||
56728151-T-A | ** | ||||||||
56835572-T-C | ** | ||||||||
56835800-T-C | ** | ||||||||
56851034-C-T | ** | ||||||||
22269543-C-G | 20107657-C-G | BY46810 | DYZ19 | *** | *** | ||||
22274187-C-G | 20112301-C-G | BY13980 | DYZ19 | *** | |||||
13846490-G-A | 11725784-G-A | DYZ17 | *** | ||||||
13478097-C-A | 11322421-C-A | *** | |||||||
13298541-T-A | 11142865-T-A | *** | |||||||
22353574-C-G | 20191688-C-G | DYZ19 | *** | ||||||
18653707-T-G | 16541827-T-G | M4666 | *** | ||||||
16290839-G-A | 14178959-G-A | *** | |||||||
22254585-C-A | 20092699-C-A | DYZ19 | *** | ||||||
58982063-CTCAAT-C,CTCCAT | 56835916-CTCAAT-C,CTCCAT | *** | |||||||
20019762-A-T | 17907882-A-T | P5_Prx | *** | ||||||
22426493-T-G | 20264607-T-G | DYZ19 | *** | ||||||
22440113-A-G | 20278227-A-G | BY52562 | DYZ19 | *** | |||||
22462367-A-G | 20300481-A-G | DYZ19 | *** | *** | |||||
25053728-A-G | 22907581-A-G | g1 | *** | ||||||
25205455-A-G | 23059308-A-G | g1 | *** | ||||||
28157496-G-A | 26011349-G-A | P1_b4 | *** | ||||||
28234453-C-A | 26088306-C-A | P1_b4 | *** | ||||||
9771931-C-T | 9934322-C-T | *** | |||||||
21624404-C-A | 19462518-C-A | *** | |||||||
15479963-TG-G,TT | 13368083-TG-G,TT | *** | |||||||
10809508-G-T | *** | ||||||||
8119045-C-T | 8251004-C-T | *** | |||||||
7241796-G-T | 7373755-G-T | *** | |||||||
16719790-C-A | 14607910-C-A | *** | |||||||
7534425-TG-T | 7666384-TG-T | *** | |||||||
4357726-G-T | 4489685-G-T | YFS510018 | *** | ||||||
21663277-AG-AA,G | 19501391-AG-AA,G | *** | |||||||
21972427-C-A | 19810541-C-A | *** | |||||||
14144091-T-C | 12023385-T-C | *** | |||||||
21985237-G-GA | 19823351-G-GA | 8×A | *** | ||||||
3688516-G-T | 3820475-G-T | *** | |||||||
13468271-G-C | 11312595-G-C | *** | |||||||
15151531-C-A | 13039618-C-A | *** | |||||||
10691118-C-A | *** | ||||||||
22849488-A-T | 20687602-A-T | *** | |||||||
15379519-C-A | 13267639-C-A | *** | |||||||
15750502-CTTTT-C | 13638622-CTTTT-C | 18×T | *** | ||||||
10677303-C-A | *** | ||||||||
9521243-C-A | 9683634-C-A | *** | |||||||
3991966-ACACTCT-A | 4123925-ACACTCT-A | *** | |||||||
4547711-T-A | 4679670-T-A | *** | |||||||
6356320-AT-A | 6488279-AT-A | *** | |||||||
7669304-C-A | 7801263-C-A | *** | |||||||
10033064-C-A | 10195455-C-A | *** | |||||||
10686688-C-G | *** | ||||||||
10689011-TC-T | *** | ||||||||
10764548-TT-C,T | *** | ||||||||
10809502-A-G | *** | ||||||||
10932749-C-G | *** | ||||||||
13468655-C-A | 11312979-C-A | *** | |||||||
11656120-C-A | DYZ17 | *** | |||||||
14741492-C-A | 12629560-C-A | *** | |||||||
15352730-C-A | 13240849-C-A | *** | |||||||
18108499-C-A | 15996619-C-A | *** | |||||||
21156845-T-A | 18994959-T-A | *** | |||||||
21276365-A-G | 19114479-A-G | *** | |||||||
21362098-G-A | 19200212-G-A | *** | |||||||
23516381-T-C | 21354495-T-C | *** | |||||||
26435141-G-A | 24288994-G-A | P1_Y1 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.