Shore
FTDNA: 408061, BigY2: 408061Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 408061 | BigY2 408061 |
---|---|---|---|---|---|---|---|---|---|
20779640-G-A | 18617754-G-A | P4_Prx | *** | A* | |||||
26161328-C-T | 24015181-C-T | P1_Y1 | *** | A* | |||||
15799177-CTCTT-C | 13687297-CTCTT-C | 13×TCTT | * | ||||||
22301854-A-T | 20139968-A-T | DYZ19 | *** | * | |||||
13908740-C-A | 11788034-C-A | ** | |||||||
14159614-C-A | 12038908-C-A | ** | |||||||
14153020-C-A | 12032314-C-A | ** | |||||||
14118323-T-C | 11997617-T-C | ** | |||||||
14073491-T-G | 11952785-T-G | ** | |||||||
14055583-C-A | 11934877-C-A | ** | |||||||
14054965-A-G | 11934259-A-G | ** | |||||||
14054095-A-G | 11933389-A-G | ** | |||||||
14017412-C-T | 11896706-C-T | ** | |||||||
13988781-C-A | 11868075-C-A | ** | |||||||
13932924-C-A | 11812218-C-A | ** | |||||||
13929230-C-A | 11808524-C-A | ** | |||||||
13861059-G-T | 11740353-G-T | ** | |||||||
14266340-A-T | 12145634-A-T | ** | |||||||
11657966-T-G | ** | ||||||||
11654865-A-G | ** | ||||||||
11654343-G-A | ** | ||||||||
11650711-A-G | ** | ||||||||
11650708-A-G | ** | ||||||||
11650703-C-A | ** | ||||||||
11650697-G-A | ** | ||||||||
11650693-A-C | ** | ||||||||
11650681-A-G | ** | ||||||||
11650674-C-A | ** | ||||||||
11650671-A-T | ** | ||||||||
11650661-G-C | ** | ||||||||
11650659-A-T | ** | ||||||||
14160384-CT-C | 12039678-CT-C | ** | |||||||
10244-A-C | ** | ||||||||
14297094-C-A | 12176388-C-A | ** | |||||||
14986541-C-A | 12874609-C-A | ** | |||||||
15637978-G-T | 13526098-G-T | ** | |||||||
15431978-C-A | 13320098-C-A | ** | |||||||
15420123-A-C | 13308243-A-C | ** | |||||||
15402300-C-A | 13290420-C-A | ** | |||||||
15380343-G-T | 13268463-G-T | ** | |||||||
15370661-T-C | 13258781-T-C | ** | |||||||
15230974-C-A | 13119060-C-A | ** | |||||||
15218587-C-A | 13106673-C-A | ** | |||||||
15211028-T-C | 13099114-T-C | ** | |||||||
15210757-T-C | 13098843-T-C | ** | |||||||
15184268-A-G | 13072354-A-G | ** | |||||||
15177514-G-T | 13065600-G-T | ** | |||||||
15103280-C-A | 12991368-C-A | ** | |||||||
14786434-C-A | 12674504-C-A | ** | |||||||
11650654-A-G | ** | ||||||||
14757257-C-A | 12645326-C-A | ** | |||||||
14742685-C-A | 12630753-C-A | FTB28561 | ** | ||||||
14667897-C-A | 12555963-C-A | ** | |||||||
14550205-C-A | 12438406-C-A | ** | |||||||
14502035-C-A | 12390240-C-A | ** | |||||||
14502007-T-G | 12390212-T-G | ** | |||||||
12379463-G-A | FT242750 | ** | |||||||
14483265-G-T | 12362534-G-T | ** | |||||||
14470288-C-A | 12349557-C-A | ** | |||||||
14422681-T-G | 12301956-T-G | ** | |||||||
14355134-C-A | 12234429-C-A | ** | |||||||
14351077-C-A | 12230372-C-A | ** | |||||||
14324950-C-T | 12204244-C-T | ** | |||||||
11650656-G-T | ** | ||||||||
11648948-T-G | ** | ||||||||
11650639-ATGG-A | ** | ||||||||
9956433-C-A | 10118824-C-A | ** | |||||||
10824167-C-A | ** | ||||||||
10807046-T-A | ** | ||||||||
10783635-T-C | ** | ||||||||
10779368-C-G | ** | ||||||||
10777787-A-G | ** | ||||||||
10776474-T-C | ** | ||||||||
10759950-C-A | ** | ||||||||
10756839-C-A | ** | ||||||||
10662908-C-T | ** | ||||||||
10653284-C-A | ** | ||||||||
10645887-A-T | ** | ||||||||
10624373-C-A | ** | ||||||||
9940692-T-C | 10103083-T-C | ** | |||||||
10825275-C-G | ** | ||||||||
9924436-T-C | 10086827-T-C | ** | |||||||
9672611-T-A | 9835002-T-A | IR3_Prx | ** | ||||||
9077889-G-A | 9240280-G-A | ** | |||||||
8974285-T-C | 9136676-T-C | ** | |||||||
8790185-CA-C | 8922144-CA-C | ** | |||||||
8723659-GT-G | 8855618-GT-G | ** | |||||||
8385537-G-T | 8517496-G-T | Y39484 | ** | ||||||
8343080-T-C | 8475039-T-C | ** | |||||||
8288748-T-A | 8420707-T-A | ** | |||||||
8138105-A-T | 8270064-A-T | ** | |||||||
7832372-T-G | 7964331-T-G | ** | |||||||
7436097-T-TAA | 7568056-T-TAA | 10×A | ** | ||||||
10824192-CA-C | ** | ||||||||
10830189-C-A | ** | ||||||||
11650635-AGG-A | ** | ||||||||
13241594-C-A | 11085918-C-A | ** | |||||||
15729089-C-A | 13617209-C-A | ** | |||||||
13745784-G-T | 11590108-G-T | ** | |||||||
13671365-G-C | 11515689-G-C | ** | |||||||
13630841-T-C | 11475165-T-C | ** | |||||||
13578728-G-A | 11423052-G-A | ** | |||||||
13510060-C-A | 11354384-C-A | ** | |||||||
13488963-A-G | 11333287-A-G | ** | |||||||
13480098-A-T | 11324422-A-T | ** | |||||||
13410610-C-A | 11254934-C-A | ** | |||||||
13384464-C-A | 11228788-C-A | ** | |||||||
13315669-C-T | 11159993-C-T | ** | |||||||
13301096-C-A | 11145420-C-A | ** | |||||||
13225665-T-C | 11069989-T-C | ** | |||||||
10847579-T-C | ** | ||||||||
11012224-G-T | ** | ||||||||
11009691-C-T | ** | ||||||||
11004770-A-G | ** | ||||||||
10997591-GCATTC-G | ** | ||||||||
10995817-T-G | ** | ||||||||
10991303-G-T | ** | ||||||||
10989052-C-A | ** | ||||||||
10973614-T-TTAAAC | ** | ||||||||
10964769-T-A | ** | ||||||||
10956854-C-A | ** | ||||||||
10933996-C-A | ** | ||||||||
10912730-C-A | ** | ||||||||
10848062-C-CGATTAGGTGG | ** | ||||||||
15712110-C-A | 13600230-C-A | ** | |||||||
15795308-G-T | 13683428-G-T | ** | |||||||
15747330-C-A | 13635450-C-A | ** | |||||||
22077235-C-G | 19915349-C-G | ** | |||||||
23126651-C-A | 20964765-C-A | ** | |||||||
23007795-G-T | 20845909-G-T | ** | |||||||
22954606-T-C | 20792720-T-C | ** | |||||||
22893267-G-C | 20731381-G-C | ** | |||||||
22629723-C-A | 20467837-C-A | ** | |||||||
22447616-T-G | 20285730-T-G | DYZ19 | ** | ||||||
22230705-A-G | 20068819-A-G | DYZ19 | ** | ||||||
22211970-C-A | 20050084-C-A | ** | |||||||
22204421-A-C | 20042535-A-C | ** | |||||||
22134999-A-G | 19973113-A-G | ** | |||||||
22134956-G-A | 19973070-G-A | ** | |||||||
22132879-A-G | 19970993-A-G | ** | |||||||
22077192-C-A | 19915306-C-A | ** | |||||||
23204348-C-A | 21042462-C-A | ** | |||||||
22076260-C-A | 19914374-C-A | ** | |||||||
22044082-C-A | 19882196-C-A | ** | |||||||
22013323-A-T | 19851437-A-T | ** | |||||||
21895610-A-G | 19733724-A-G | ** | |||||||
21890997-G-T | 19729111-G-T | ** | |||||||
21697181-C-A | 19535295-C-A | ** | |||||||
21488831-GA-G | 19326945-GA-G | ** | |||||||
21464552-A-AAG | 19302666-A-AAG | ** | |||||||
21456116-C-A | 19294230-C-A | ** | |||||||
21410186-A-T | 19248300-A-T | ** | |||||||
21371692-C-A | 19209806-C-A | ** | |||||||
21368447-A-C | 19206561-A-C | ** | |||||||
23186021-C-A | 21024135-C-A | ** | |||||||
23212237-C-A | 21050351-C-A | ** | |||||||
21325916-A-G | 19164030-A-G | Y76247 | ** | ||||||
28467848-C-G | 26321701-C-G | ** | |||||||
56872650-C-A | ** | ||||||||
56840182-G-T | ** | ||||||||
56839386-CT-C | ** | ||||||||
56839385-A-C | ** | ||||||||
56835325-T-A | ** | ||||||||
28741266-C-A | 26595119-C-A | ** | |||||||
28697629-A-T | 26551482-A-T | ** | |||||||
28643746-A-T | 26497599-A-T | ** | |||||||
28633670-C-A | 26487523-C-A | ** | |||||||
28580485-C-T | 26434338-C-T | ** | |||||||
28537055-C-A | 26390908-C-A | ** | |||||||
28483591-C-A | 26337444-C-A | ** | |||||||
28464996-C-A | 26318849-C-A | ** | |||||||
23434546-C-A | 21272660-C-A | ** | |||||||
28398256-T-TC | 26252109-T-TC | P1_gr2 | ** | ||||||
28048518-C-A | 25902371-C-A | P1_Y2 | ** | ||||||
28048413-C-A | 25902266-C-A | P1_Y2 | ** | ||||||
27877635-A-G | 25731488-A-G | P1_Y2 | ** | ||||||
27022194-T-C | 24876047-T-C | P1_r4 | ** | ||||||
26740571-C-G | 24594424-C-G | P1_g2 | ** | ||||||
25354257-T-C | 23208110-T-C | P2_r1 | ** | ||||||
24485811-C-A | 22339664-C-A | ** | |||||||
24407140-T-C | 22260993-T-C | ** | |||||||
23848793-G-T | 21686907-G-T | ** | |||||||
23825665-A-G | 21663779-A-G | ** | |||||||
23623328-G-T | 21461442-G-T | ** | |||||||
23460256-C-A | 21298370-C-A | ** | |||||||
21338279-A-G | 19176393-A-G | ** | |||||||
21307266-C-A | 19145380-C-A | ** | |||||||
15776202-T-C | 13664322-T-C | ** | |||||||
16980008-T-C | 14868128-T-C | ** | |||||||
17944958-A-G | 15833078-A-G | ** | |||||||
17734586-A-T | 15622706-A-T | ** | |||||||
17730533-A-T | 15618653-A-T | ** | |||||||
17693726-C-A | 15581846-C-A | ** | |||||||
17454109-C-T | 15342229-C-T | ** | |||||||
17385571-C-A | 15273691-C-A | ** | |||||||
17375955-C-A | 15264075-C-A | ** | |||||||
17372020-C-A | 15260140-C-A | ** | |||||||
17157584-A-G | 15045704-A-G | ** | |||||||
17144089-T-C | 15032209-T-C | ** | |||||||
17014396-C-A | 14902516-C-A | ** | |||||||
16987034-C-A | 14875154-C-A | ** | |||||||
16930011-C-A | 14818131-C-A | ** | |||||||
17968987-A-G | 15857107-A-G | ** | |||||||
16926715-G-C | 14814835-G-C | ** | |||||||
16720123-C-A | 14608243-C-A | ** | |||||||
16620302-C-A | 14508422-C-A | ** | |||||||
16507106-C-A | 14395226-C-A | ** | |||||||
16351450-C-A | 14239570-C-A | ** | |||||||
16196307-C-A | 14084427-C-A | ** | |||||||
16057931-T-C | 13946051-T-C | ** | |||||||
16007095-C-T | 13895215-C-T | FGC37856 | ** | ||||||
15946676-G-A | 13834796-G-A | ** | |||||||
15941364-C-A | 13829484-C-A | ** | |||||||
15937294-A-T | 13825414-A-T | ** | |||||||
15922952-G-A | 13811072-G-A | ** | |||||||
7347773-C-A | 7479732-C-A | ** | |||||||
17944986-A-G | 15833106-A-G | ** | |||||||
18153604-T-G | 16041724-T-G | ** | |||||||
21136709-T-G | 18974823-T-G | ** | |||||||
19201003-A-G | 17089123-A-G | ** | |||||||
21037337-G-C | 18875451-G-C | ** | |||||||
20629687-A-G | 18467801-A-G | P4_Prx | ** | ||||||
20352366-A-G | 18190480-A-G | P5_Dst | ** | ||||||
19925967-C-A | 17814087-C-A | P5_Prx | ** | ||||||
19925904-A-C | 17814024-A-C | P5_Prx | ** | ||||||
19884266-A-AG | 17772386-A-AG | P5_Prx | ** | ||||||
19755025-C-A | 17643145-C-A | P5_Prx | ** | ||||||
19609497-C-A | 17497617-C-A | P5_Prx | ** | ||||||
19482216-C-A | 17370336-C-A | ** | |||||||
19459400-C-A | 17347520-C-A | ** | |||||||
19416739-A-G | 17304859-A-G | ** | |||||||
19275326-C-A | 17163446-C-A | ** | |||||||
19155172-G-T | 17043292-G-T | ** | |||||||
18155801-C-A | 16043921-C-A | ** | |||||||
19135216-G-T | 17023336-G-T | ** | |||||||
19081314-G-A | 16969434-G-A | ** | |||||||
19071750-TCTTTATTTCTATGC-T | 16959870-TCTTTATTTCTATGC-T | ** | |||||||
18987326-A-G | 16875446-A-G | ** | |||||||
18987201-C-A | 16875321-C-A | ** | |||||||
18976660-G-A | 16864780-G-A | ** | |||||||
18953052-GGA-G | 16841172-GGA-G | ** | |||||||
18789678-C-T | 16677798-C-T | ** | |||||||
18577980-T-A | 16466100-T-A | ** | |||||||
18406998-AG-A | 16295118-AG-A | P6_Gap | ** | ||||||
18190476-T-G | 16078596-T-G | ** | |||||||
18186237-C-A | 16074357-C-A | FTA48887 | ** | ||||||
18174779-C-A | 16062899-C-A | ** | |||||||
7368990-C-A | 7500949-C-A | ** | |||||||
8977950-T-C | 9140341-T-C | ** | |||||||
7336308-C-A | 7468267-C-A | ** | |||||||
5864807-C-A | 5996766-C-A | ** | |||||||
14660442-A-T | 12548507-A-T | ** | |||||||
10946165-G-T | ** | ||||||||
16471503-C-A | 14359623-C-A | ** | |||||||
13329262-G-T | 11173586-G-T | ** | |||||||
2729690-C-T | 2861649-C-T | ** | |||||||
22164402-G-C | 20002516-G-C | ** | |||||||
16971302-A-G | 14859422-A-G | ** | |||||||
7183842-T-G | 7315801-T-G | ** | |||||||
13237689-C-A | 11082013-C-A | ** | |||||||
9753976-T-TC | 9916367-T-TC | ** | |||||||
10821902-C-CATTCA | ** | ||||||||
10821898-A-ATTCCC | ** | ||||||||
13489447-G-A | 11333771-G-A | ** | |||||||
13594263-C-A | 11438587-C-A | ** | |||||||
13884954-C-A | 11764248-C-A | ** | |||||||
10843683-T-G | ** | ||||||||
10766436-T-C | ** | ||||||||
22097268-CT-C | 19935382-CT-C | 9×T | ** | ||||||
3640658-A-T | 3772617-A-T | ** | |||||||
7236651-C-A | 7368610-C-A | ** | |||||||
3725904-C-A | 3857863-C-A | ** | |||||||
13202762-C-A | 11047086-C-A | ** | |||||||
13855657-C-A | 11734951-C-A | ** | |||||||
10973597-C-A | ** | ||||||||
21283320-C-A | 19121434-C-A | ** | |||||||
15684664-C-A | 13572784-C-A | FT76450 | ** | ||||||
22914651-T-C | 20752765-T-C | ** | |||||||
28570641-C-A | 26424494-C-A | ** | |||||||
7243200-C-A | 7375159-C-A | ** | |||||||
17503844-AT-A | 15391964-AT-A | ** | |||||||
2708175-T-A | 2840134-T-A | ** | |||||||
11015811-C-A | ** | ||||||||
14286906-G-T | 12166200-G-T | ** | |||||||
9374710-C-A | 9537101-C-A | ** | |||||||
6688723-C-A | 6820682-C-A | ** | |||||||
24403281-C-A | 22257134-C-A | ** | |||||||
10624410-C-A | ** | ||||||||
8110705-C-A | 8242664-C-A | ** | |||||||
3131776-G-T | 3263735-G-T | ** | |||||||
8907673-A-G | 9039632-A-G | FT153457 | 18×TG | ** | |||||
17929171-C-A | 15817291-C-A | ** | |||||||
9639228-G-T | 9801619-G-T | IR3_Prx | ** | ||||||
7319804-C-A | 7451763-C-A | ** | |||||||
21775238-C-A | 19613352-C-A | ** | |||||||
8901045-A-T | 9033004-A-T | ** | |||||||
5852352-C-A | 5984311-C-A | ** | |||||||
16277685-C-A | 14165805-C-A | ** | |||||||
18520569-G-T | 16408689-G-T | P6_Dst | ** | ||||||
13855310-T-A | 11734604-T-A | ** | |||||||
56728188-G-C | ** | ||||||||
22164545-C-A | 20002659-C-A | ** | |||||||
10848048-A-C | ** | ||||||||
7019199-C-A | 7151158-C-A | ** | |||||||
14697004-C-A | 12585070-C-A | ** | |||||||
14550714-G-C | 12438915-G-C | ** | |||||||
5698827-G-T | 5830786-G-T | ** | |||||||
5844403-G-GA | 5976362-G-GA | 9×A | ** | ||||||
13971579-G-A | 11850873-G-A | ** | |||||||
2885454-C-A | 3017413-C-A | ** | |||||||
20659365-C-T | 18497479-C-T | BY22886 | P4_Prx | ** | |||||
10825295-C-G | ** | ||||||||
10974810-C-T | ** | ||||||||
10974804-G-C | ** | ||||||||
10974775-C-A | ** | ||||||||
18564994-T-A | 16453114-T-A | ** | |||||||
22997565-C-A | 20835679-C-A | ** | |||||||
10974783-T-A | ** | ||||||||
2790303-C-T | 2922262-C-T | 15×T | ** | ||||||
9921849-G-GTT | 10084240-G-GTT | ** | |||||||
20998279-T-G | 18836393-T-G | P4_Dst | ** | ||||||
9700804-T-A | 9863195-T-A | IR3_Prx | ** | ||||||
58997021-G-A | 56850874-G-A | ** | |||||||
19128579-T-G | 17016699-T-G | Z17906 | ** | ||||||
56850849-C-A | ** | ||||||||
16623881-G-C | 14512001-G-C | K256 | ** | ** | |||||
16029078-C-A | 13917198-C-A | ** | |||||||
9398040-AG-A | 9560431-AG-A | ** | |||||||
6074774-T-TTA | 6206733-T-TTA | ** | |||||||
4187839-C-A | 4319798-C-A | ** | |||||||
4614461-T-A | 4746420-T-A | FT132810 | ** | ||||||
3640681-TCTCC-T | 3772640-TCTCC-T | ** | |||||||
19271589-C-A | 17159709-C-A | ** | |||||||
14846865-G-A | 12734931-G-A | FT296311 | ** | ||||||
14610673-A-C | 12498875-A-C | ** | |||||||
13480364-C-T | 11324688-C-T | ** | |||||||
3640538-TC-T | 3772497-TC-T | ** | |||||||
10825295-C-CAATTA | ** | ||||||||
9934196-C-A | 10096587-C-A | ** | |||||||
22871412-C-A | 20709526-C-A | ** | |||||||
13480363-C-T | 11324687-C-T | BY86056 | ** | ||||||
13239871-G-T | 11084195-G-T | ** | |||||||
9980606-C-A | 10142997-C-A | ** | |||||||
4547629-C-A | 4679588-C-A | ** | |||||||
10671971-C-A | ** | ||||||||
10821934-T-C | ** | ||||||||
20791852-G-A | 18629966-G-A | BY51856 | P4_Prx | ** | |||||
28653379-G-A | 26507232-G-A | ** | |||||||
24880324-C-A | 22734177-C-A | g1 | ** | ||||||
10819826-TTTCCA-T | ** | ||||||||
11650631-A-G | ** | ||||||||
8051857-C-A | 8183816-C-A | ** | |||||||
2729681-A-G | 2861640-A-G | ** | |||||||
10995944-C-T | ** | ||||||||
26593011-C-A | 24446864-C-A | P1_g2 | ** | ||||||
14340806-AT-A | 12220101-AT-A | ** | |||||||
11022899-C-CTCAAT | ** | ||||||||
9891056-C-T | 10053447-C-T | ** | |||||||
10807122-C-T | ** | ||||||||
10807119-G-A | ** | ||||||||
10807110-T-TTACAC | ** | ||||||||
16545410-T-C | 14433530-T-C | ** | |||||||
7504604-C-A | 7636563-C-A | IR1_L | ** | ||||||
5458669-C-A | 5590628-C-A | ** | |||||||
21267925-C-A | 19106039-C-A | ** | |||||||
10824208-A-T | ** | ||||||||
3640676-T-C | 3772635-T-C | ** | |||||||
2813701-C-A | 2945660-C-A | ** | |||||||
13463549-C-A | 11307873-C-A | ** | |||||||
2953216-T-C | 3085175-T-C | ** | |||||||
5535158-TATATATATATA-T | 5667117-TATATATATATA-T | ** | |||||||
5844502-A-T | 5976461-A-T | ** | |||||||
5829593-C-A | 5961552-C-A | ** | |||||||
3178201-T-C | 3310160-T-C | ** | |||||||
5813672-C-A | 5945631-C-A | ** | |||||||
5742109-G-T | 5874068-G-T | ** | |||||||
5718560-G-T | 5850519-G-T | ** | |||||||
5668988-C-A | 5800947-C-A | ** | |||||||
5635545-C-A | 5767504-C-A | ** | |||||||
5627496-C-A | 5759455-C-A | ** | |||||||
5457249-C-T | 5589208-C-T | ** | |||||||
5935279-C-A | 6067238-C-A | ** | |||||||
5394099-G-T | 5526058-G-T | ** | |||||||
5319749-A-G | 5451708-A-G | ** | |||||||
5241757-G-T | 5373716-G-T | ** | |||||||
5190056-AT-A | 5322015-AT-A | ** | |||||||
5141962-G-T | 5273921-G-T | ** | |||||||
5091487-G-T | 5223446-G-T | ** | |||||||
5061783-G-T | 5193742-G-T | ** | |||||||
5005900-C-A | 5137859-C-A | ** | |||||||
4957790-G-T | 5089749-G-T | ** | |||||||
5868538-T-C | 6000497-T-C | ** | |||||||
6012870-G-T | 6144829-G-T | ** | |||||||
4918244-T-C | 5050203-T-C | ** | |||||||
7008813-C-A | 7140772-C-A | ** | |||||||
7309880-G-T | 7441839-G-T | ** | |||||||
7256993-G-T | 7388952-G-T | ** | |||||||
7221717-G-A | 7353676-G-A | ** | |||||||
7183859-T-G | 7315818-T-G | ** | |||||||
7174430-T-C | 7306389-T-C | ** | |||||||
7165376-A-T | 7297335-A-T | ** | |||||||
7109381-T-A | 7241340-T-A | ** | |||||||
7081274-A-T | 7213233-A-T | ** | |||||||
7042850-C-A | 7174809-C-A | ** | |||||||
7001728-A-T | 7133687-A-T | ** | |||||||
6375723-G-T | 6507682-G-T | ** | |||||||
6992518-A-G | 7124477-A-G | ** | |||||||
6926973-C-A | 7058932-C-A | ** | |||||||
6787046-T-C | 6919005-T-C | ** | |||||||
6699097-C-A | 6831056-C-A | ** | |||||||
6646873-C-A | 6778832-C-A | ** | |||||||
6623165-C-A | 6755124-C-A | FGC25354 YP2460 | ** | ||||||
6622887-C-A | 6754846-C-A | ** | |||||||
6609122-C-A | 6741081-C-A | ** | |||||||
6441048-C-A | 6573007-C-A | ** | |||||||
6434557-G-A | 6566516-G-A | ** | |||||||
4951629-C-G | 5083588-C-G | ** | |||||||
5824212-G-A | 5956171-G-A | FT18050 | ** | ||||||
4896929-G-T | 5028888-G-T | ** | |||||||
4085909-G-T | 4217868-G-T | ** | |||||||
4350419-G-GA | 4482378-G-GA | 9×A | ** | ||||||
4337562-C-A | 4469521-C-A | ** | |||||||
4308454-C-A | 4440413-C-A | ** | |||||||
3275882-C-A | 3407841-C-A | ** | |||||||
4240211-C-A | 4372170-C-A | ** | |||||||
4215898-T-G | 4347857-T-G | ** | |||||||
4144178-T-C | 4276137-T-C | ** | |||||||
4138424-G-T | 4270383-G-T | ** | |||||||
4103178-T-G | 4235137-T-G | ** | |||||||
4094086-C-A | 4226045-C-A | ** | |||||||
3436309-C-T | 3568268-C-T | ** | |||||||
4371074-C-A | 4503033-C-A | ** | |||||||
4062632-C-A | 4194591-C-A | ** | |||||||
3890510-A-C | 4022469-A-C | ** | |||||||
3890474-A-C | 4022433-A-C | ** | |||||||
3493063-G-T | 3625022-G-T | ** | |||||||
3608691-G-T | 3740650-G-T | ** | |||||||
3875788-A-AT | 4007747-A-AT | 8×T | ** | ||||||
4892439-C-A | 5024398-C-A | ** | |||||||
3670709-C-A | 3802668-C-A | ** | |||||||
3684630-A-T | 3816589-A-T | ** | |||||||
3838964-G-T | 3970923-G-T | ** | |||||||
4361390-C-A | 4493349-C-A | ** | |||||||
4187891-C-A | 4319850-C-A | ** | |||||||
4401681-G-T | 4533640-G-T | ** | |||||||
4604404-A-G | 4736363-A-G | ** | |||||||
3218526-T-C | 3350485-T-C | ** | |||||||
4766429-C-A | 4898388-C-A | ** | |||||||
4690917-G-T | 4822876-G-T | FT184076 | ** | ||||||
4469406-C-G | 4601365-C-G | ** | |||||||
4604434-A-G | 4736393-A-G | ** | |||||||
3239435-G-T | 3371394-G-T | ** | |||||||
4604409-C-A | 4736368-C-A | ** | |||||||
4614498-T-C | 4746457-T-C | ** | |||||||
4495700-C-A | 4627659-C-A | ** | |||||||
4473879-T-C | 4605838-T-C | FTA4159 | ** | ||||||
4557188-A-T | 4689147-A-T | ** | |||||||
3252055-C-A | 3384014-C-A | ** | |||||||
58976949-C-T | 56830802-C-T | *** | |||||||
56841133-T-A,C | *** | ||||||||
24459206-A-G | 22313059-A-G | *** | |||||||
7020281-C-A | 7152240-C-A | *** | |||||||
24406909-G-T | 22260762-G-T | *** | |||||||
13489553-G-T | 11333877-G-T | *** | |||||||
13404795-G-A | 11249119-G-A | *** | |||||||
56847361-CTGATCAACCAGGT-C | *** | ||||||||
22454975-G-C | 20293089-G-C | DYZ19 | *** | ||||||
58979455-TG-T,TT | 56833308-TG-T,TT | *** | |||||||
9371429-ACT-A | 9533820-ACT-A | *** | |||||||
22296948-T-A | 20135062-T-A | DYZ19 | *** | ||||||
22296949-A-G | 20135063-A-G | DYZ19 | *** | ||||||
7432230-C-A | 7564189-C-A | *** | |||||||
7242529-T-C | 7374488-T-C | *** | |||||||
22364033-G-C | 20202147-G-C | DYZ19 | *** | ||||||
8591755-T-G | 8723714-T-G | *** | |||||||
26130599-AAG-A | 23984452-AAG-A | P1_Y1 | *** | ||||||
8736363-T-C | 8868322-T-C | *** | |||||||
56835655-C-CTCCAG,CTCCTG | *** | ||||||||
13196247-TCACTC-T | 11040571-TCACTC-T | 5×CACTC | *** | ||||||
28146836-C-A | 26000689-C-A | P1_b4 | *** | ||||||
8649461-G-T | 8781420-G-T | *** | |||||||
8427467-C-A | 8559426-C-A | *** | |||||||
10657369-C-A | *** | ||||||||
6953238-GAC-G | 7085197-GAC-G | *** | |||||||
28479016-G-T | 26332869-G-T | FT303069 | *** | ||||||
56831889-ATTCCATTCCT-A,ATTCCATTCCA | *** | ||||||||
8217977-C-A | 8349936-C-A | *** | |||||||
22296973-G-A | 20135087-G-A | DYZ19 | *** | ||||||
22296950-C-T | 20135064-C-T | DYZ19 | *** | ||||||
10657390-C-CATTGT | *** | ||||||||
24106652-AG-A | 21960505-AG-A | P3_b1 | *** | ||||||
16351945-G-T | 14240065-G-T | *** | |||||||
10801698-A-ACCCGGAT | *** | ||||||||
11676710-TG-T | *** | ||||||||
10878294-C-A | *** | ||||||||
10916192-G-T | *** | ||||||||
5313534-C-A | 5445493-C-A | *** | |||||||
11014451-C-T | *** | ||||||||
18253139-AT-A | 16141259-AT-A | *** | |||||||
13314656-T-C | 11158980-T-C | *** | |||||||
2979296-CTTTTT-C | 3111255-CTTTTT-C | 15×T | *** | ||||||
16620421-C-T | 14508541-C-T | *** | |||||||
13485155-A-G | 11329479-A-G | *** | |||||||
13488919-CA-C | 11333243-CA-C | *** | |||||||
13489518-T-A | 11333842-T-A | *** | |||||||
10980665-C-T | *** | ||||||||
13489529-CGCGG-C,CGCAC | 11333853-CGCGG-C,CGCAC | *** | |||||||
13489544-A-T | 11333868-A-T | *** | |||||||
13489557-T-C,G | 11333881-T-C,G | *** | |||||||
22849491-CTTTTTT-C | 20687605-CTTTTTT-C | 20×T | *** | ||||||
6523642-T-C | 6655601-T-C | *** | |||||||
24170134-A-T | 22023987-A-T | P3_b1 | *** | ||||||
10779524-C-A | *** | ||||||||
24330452-C-T | 22184305-C-T | P3_t1 | *** | ||||||
24708547-T-A | 22562400-T-A | P3_b2 | *** | ||||||
24893753-T-C | 22747606-T-C | g1 | *** | ||||||
14986726-A-G | 12874792-A-G | *** | |||||||
9996565-G-A | 10158956-G-A | *** | |||||||
10013593-C-T | 10175984-C-T | *** | |||||||
10033361-C-A | 10195752-C-A | *** | |||||||
6787387-G-T | 6919346-G-T | *** | |||||||
15258616-C-A | 13146700-C-A | *** | |||||||
3889773-C-A | 4021732-C-A | *** | |||||||
10657375-C-G | *** | ||||||||
10657388-T-TCTTTG | *** | ||||||||
10744489-C-T | *** | ||||||||
13484038-G-T | 11328362-G-T | *** | |||||||
13484059-A-G | 11328383-A-G | *** | |||||||
2821377-CAA-C,CA | 2953336-CAA-C,CA | 17×A | *** | ||||||
10755007-AATTTC-A,CATT | *** | ||||||||
22364009-T-A | 20202123-T-A | DYZ19 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 408061 | 10733565 | 7769668 | 7850138 |
Kit: 408061 | 9702507 | 7902929 | 7798428 |
Used in age calculations | 10733565 | 7902929 | 7850138 |
Counts of SNPs | 0 | 0 |
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