Zhang
FTDNA: 306539MDKA Birth: China
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 306539 |
---|---|---|---|---|---|---|---|---|
23881876-CAAA-C | 21719990-CAAA-C | 18×A | + | |||||
13703255-T-C | 11547579-T-C | BY3402 | + | |||||
6324570-A-G | 6456529-A-G | IR3_Dst | + | |||||
6513155-C-CT | 6645114-C-CT | + | ||||||
7391411-T-C | 7523370-T-C | Y61993 | Y | Y | + | |||
7643746-C-G | 7775705-C-G | Y62295 | Y | Y | + | |||
8717249-G-T | 8849208-G-T | Y64381 | Y | Y | + | |||
9227726-C-G | 9390117-C-G | A12444 | Y | + | ||||
13289784-A-C | 11134108-A-C | BY85004 | + | |||||
13670038-A-T | 11514362-A-T | BY87771 | + | |||||
14495243-TT-C | 12383440-TT-C | + | ||||||
14906783-G-C | 12794850-G-C | Y67421 | Y | Y | + | |||
15153394-G-A | 13041481-G-A | Y21770 | Y | Y | + | |||
15624554-G-A | 13512674-G-A | BY102979 | Y | Y | + | |||
15799122-T-A | 13687242-T-A | BY48817 | Y | Y | + | |||
16343707-T-C | 14231827-T-C | Y69707 | Y | Y | + | |||
16431133-GC-G | 14319253-GC-G | + | ||||||
16802070-A-G | 14690190-A-G | Y70520 | Y | Y | + | |||
16818683-T-A | 14706803-T-A | BY110377 | Y | Y | + | |||
16986588-T-TC | 14874708-T-TC | + | ||||||
17608135-A-G | 15496255-A-G | Z24625 | Y | Y | + | |||
17789676-G-A | 15677796-G-A | Y72342 | Y | Y | + | |||
17950825-AATATATATATATATATATATATATATATATATATATATAT-A | 15838945-AATATATATATATATATATATATATATATATATATATATAT-A | 27×AT | + | |||||
18030256-G-A | 15918376-G-A | Y72859 | Y | + | ||||
18271680-G-C | 16159800-G-C | BY121358 | P6_Prx | + | ||||
18405476-TA-T | 16293596-TA-T | P6_Gap | 8×A | + | ||||
19250664-GTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-G | 17138784-GTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-G | 45×T | + | |||||
19377488-A-C | 17265608-A-C | BY128600 | Y | Y | + | |||
19389038-G-A | 17277158-G-A | Z24615 | Y | + | ||||
19476828-GAAC-G | 17364948-GAAC-G | + | ||||||
19731001-T-C | 17619121-T-C | P5_Prx | + | |||||
19972507-A-G | 17860627-A-G | BY1640 E461 | P5_Prx | + | ||||
20040939-T-C | 17929059-T-C | K25 | P5_Prx | + | ||||
21756935-G-A | 19595049-G-A | Y77066 | Y | Y | + | |||
22235597-G-T | 20073711-G-T | DYZ19 | + | |||||
22425966-T-A | 20264080-T-A | BY48894 | DYZ19 | + | ||||
22474980-G-A | 20313094-G-A | BY202303 | DYZ19 | + | ||||
23081497-T-TG | 20919611-T-TG | + | ||||||
23872581-T-A | 21710695-T-A | BY148663 | Y | + | ||||
23882564-C-T | 21720678-C-T | Z24566 | Y | + | ||||
24992848-C-T | 22846701-C-T | g1 | + | |||||
27335803-G-A | 25189656-G-A | A12445 | P1_g3 | + | ||||
9941298-T-C | 10103689-T-C | A15633 | ** | |||||
13858990-T-G | 11738284-T-G | ** | ||||||
13858995-C-G | 11738289-C-G | ** | ||||||
13859000-A-G | 11738294-A-G | ** | ||||||
13859005-A-G | 11738299-A-G | ** | ||||||
13859014-C-T | 11738308-C-T | ** | ||||||
13859039-C-G | 11738333-C-G | A17010 | ** | |||||
13859040-T-G | 11738334-T-G | A17011 | ** | |||||
13859050-T-G | 11738344-T-G | ** | ||||||
9941300-A-G | 10103691-A-G | ** | ||||||
26239587-T-C | 24093440-T-C | P1_Y1 | ** | |||||
24625239-C-T | 22479092-C-T | P3_t2 | ** | |||||
10066800-AA-C | 10229191-AA-C | ** | ||||||
10041755-A-T | 10204146-A-T | ** | ||||||
9741121-C-T | 9903512-C-T | IR3_Prx | ** | |||||
20353155-A-AT | 18191269-A-AT | P5_Dst | ** | |||||
22424596-G-C | 20262710-G-C | DYZ19 | ** | |||||
22485115-G-T | 20323229-G-T | Z24619 | DYZ19 | ** | ||||
22507447-A-C | 20345561-A-C | BY53366 | DYZ19 | ** | ||||
23730393-TG-T | 21568507-TG-T | ** | ||||||
24272351-C-G | 22126204-C-G | P3_b1 | ** | |||||
24872377-G-A | 22726230-G-A | BY226142 | IR1_R | ** | ||||
26729791-T-A | 24583644-T-A | P1_g2 | ** | |||||
27216738-G-C | 25070591-G-C | P1_g3 | ** | |||||
28090336-A-C | 25944189-A-C | BY227081 | P1_Y2 | ** | ||||
13447240-C-T | 11291564-C-T | *** | ||||||
13447304-C-T | 11291628-C-T | *** | ||||||
13447311-G-A,C | 11291635-G-A,C | *** | ||||||
13448801-T-C | 11293125-T-C | *** | ||||||
13455477-T-C | 11299801-T-C | *** | ||||||
13674802-C-G | 11519126-C-G | *** | ||||||
13674811-T-A | 11519135-T-A | *** | ||||||
13677918-A-G | 11522242-A-G | BY88097 | *** | |||||
13677919-A-G | 11522243-A-G | *** | ||||||
13813441-A-G | 11692735-A-G | *** | ||||||
13818178-A-G | 11697472-A-G | *** | ||||||
13818705-T-A | 11697999-T-A | *** | ||||||
13837437-T-G | 11716731-T-G | *** | ||||||
13839737-T-A | 11719031-T-A | *** | ||||||
13848007-A-G | 11727301-A-G | *** | ||||||
13857459-T-A | 11736753-T-A | *** | ||||||
13860144-T-G | 11739438-T-G | *** | ||||||
25271772-CA-C | 23125625-CA-C | P2_r1 | 22×A | *** | ||||
27822289-CA-C | 25676142-CA-C | P1_Y2 | 14×A | *** | ||||
13815611-T-A | 11694905-T-A | *** | ||||||
13815619-A-T | 11694913-A-T | *** | ||||||
13847931-G-T | 11727225-G-T | *** | ||||||
13853573-A-G | 11732867-A-G | FGC75062 | *** | |||||
13682940-A-G | 11527264-A-G | *** | ||||||
13682977-A-G | 11527301-A-G | *** | ||||||
13839739-T-A | 11719033-T-A | *** | ||||||
13455640-A-G | 11299964-A-G | *** | ||||||
13661985-G-T | 11506309-G-T | *** | ||||||
13661988-T-A | 11506312-T-A | *** | ||||||
13662055-G-A | 11506379-G-A | *** | ||||||
13662075-G-A | 11506399-G-A | *** | ||||||
13839721-C-G | 11719015-C-G | *** | ||||||
13839723-G-C | 11719017-G-C | *** | ||||||
22296246-A-T | 20134360-A-T | DYZ19 | *** | |||||
25007122-TA-T | 22860975-TA-T | g1 | 13×A | *** | ||||
58873215-G-C | 56717656-C-G | 4×CATTC | *** | |||||
9961008-C-A | 10123399-C-A | *** | ||||||
13406185-C-T | 11250509-C-T | *** | ||||||
13451716-CTCCACTCCAGTCCAT-C,CTCCACTCCACTCCAT | 11296040-CTCCACTCCAGTCCAT-C,CTCCACTCCACTCCAT | *** | ||||||
13843481-T-A | 11722775-T-A | *** | ||||||
13862126-G-A | 11741420-G-A | *** | ||||||
19751616-CA-C | 17639736-CA-C | P5_Prx | 17×A | *** | ||||
13815015-G-C | 11694309-G-C | *** | ||||||
13815667-C-G | 11694961-C-G | *** | ||||||
9944024-T-C | 10106415-T-C | *** | ||||||
13453799-ACTATT-A | 11298123-ACTATT-A | *** | ||||||
13455480-A-G | 11299804-A-G | *** | ||||||
13801473-G-C | 11680767-G-C | *** | ||||||
13801502-T-G | 11680796-T-G | *** | ||||||
13801508-G-A | 11680802-G-A | *** | ||||||
13801690-A-G | 11680984-A-G | BY25790 | *** | |||||
13819105-A-T | 11698399-A-T | *** | ||||||
13819117-G-A | 11698411-G-A | *** | ||||||
13822237-T-G | 11701531-T-G | BY25772 | *** | |||||
13824577-G-T | 11703871-G-T | *** | ||||||
13838026-T-C | 11717320-T-C | *** | ||||||
13839754-A-G | 11719048-A-G | *** | ||||||
13843467-A-C | 11722761-A-C | *** | ||||||
13843469-A-C | 11722763-A-C | *** | ||||||
13860399-G-C | 11739693-G-C | *** | ||||||
13860405-G-A | 11739699-G-A | *** | ||||||
13860418-A-T | 11739712-A-T | *** | ||||||
13863314-A-G | 11742608-A-G | *** | ||||||
14480551-G-T | 12359820-G-T | *** | ||||||
9991742-T-C | 10154133-T-C | *** | ||||||
9991743-G-A | 10154134-G-A | *** | ||||||
9991749-T-C | 10154140-T-C | *** | ||||||
9994884-T-G | 10157275-T-G | *** | ||||||
9994885-C-T | 10157276-C-T | *** | ||||||
13659658-A-T | 11503982-A-T | *** | ||||||
13678599-C-G | 11522923-C-G | *** | ||||||
13799165-C-CGAATGGAATG | 11678459-C-CGAATGGAATG | *** | ||||||
13811987-C-G | 11691281-C-G | *** | ||||||
13818160-T-C | 11697454-T-C | *** | ||||||
13824491-A-G | 11703785-A-G | *** | ||||||
13845475-T-C | 11724769-T-C | *** | ||||||
13847322-T-A | 11726616-T-A | *** | ||||||
13853266-A-T | 11732560-A-T | *** | ||||||
13853324-A-T | 11732618-A-T | *** | ||||||
13854271-A-T | 11733565-A-T | *** | ||||||
13856480-T-A | 11735774-T-A | *** | ||||||
13856604-G-A | 11735898-G-A | *** | ||||||
13866864-G-A | 11746158-G-A | *** | ||||||
22359083-A-C | 20197197-A-C | DYZ19 | *** | |||||
26901125-C-CAT | 24754978-C-CAT | P1_r3 | 11×AT | *** | ||||
26189760-GT-G | 24043613-GT-G | P1_Y1 | 21×T | *** | ||||
28787301-G-A | 26641154-G-A | *** | ||||||
10023990-A-G | 10186381-A-G | *** | ||||||
13658756-G-T | 11503080-G-T | *** | ||||||
13811985-G-A | 11691279-G-A | *** | ||||||
13811992-T-C | 11691286-T-C | *** | ||||||
13853260-G-A | 11732554-G-A | FTB62422 | *** | |||||
13855158-A-T | 11734452-A-T | *** | ||||||
13860449-C-G | 11739743-C-G | FT387094 | *** | |||||
13865843-T-C | 11745137-T-C | *** | ||||||
26224807-T-TTA | 24078660-T-TTA | P1_Y1 | 9×TA | *** | ||||
9982900-C-A | 10145291-C-A | *** | ||||||
13658774-G-A,T | 11503098-G-A,T | *** | ||||||
13658787-A-G,T | 11503111-A-G,T | *** | ||||||
13856598-C-G | 11735892-C-G | *** | ||||||
25971762-G-C | 23825615-G-C | A17171 | P1_Y1 | *** | ||||
25971763-T-A | 23825616-T-A | A17172 | P1_Y1 | *** | ||||
9966326-A-G | 10128717-A-G | *** | ||||||
13812342-T-C | 11691636-T-C | *** | ||||||
13812346-G-T | 11691640-G-T | *** | ||||||
13858642-G-C | 11737936-G-C | *** | ||||||
13865578-A-T | 11744872-A-T | *** | ||||||
13865595-A-G | 11744889-A-G | *** | ||||||
19071418-C-T | 16959538-C-T | CTS9789 | *** | |||||
24223280-G-A | 22077133-G-A | FGC11293 | DC268 | P3_b1 | *** | |||
13406174-A-G | 11250498-A-G | *** | ||||||
13855157-A-T | 11734451-A-T | *** | ||||||
10021535-T-C | 10183926-T-C | *** | ||||||
13437646-C-A | 11281970-C-A | *** | ||||||
10016126-T-G | 10178517-T-G | *** | ||||||
9954021-G-T | 10116412-G-T | *** | ||||||
9954028-G-T | 10116419-G-T | *** | ||||||
13800573-G-C | 11679867-G-C | *** | ||||||
13800582-C-T | 11679876-C-T | *** | ||||||
13800583-A-G | 11679877-A-G | FT451596 | *** | |||||
13802009-T-G | 11681303-T-G | *** | ||||||
13812361-T-A | 11691655-T-A | BY25766 | *** | |||||
13812367-C-G | 11691661-C-G | BY25767 | *** | |||||
13828550-T-C | 11707844-T-C | *** | ||||||
13844533-T-G | 11723827-T-G | *** | ||||||
13867862-C-G | 11747156-C-G | *** | ||||||
28788071-A-T | 26641924-A-T | *** | ||||||
10020446-A-G | 10182837-A-G | *** | ||||||
9980395-A-T | 10142786-A-T | *** | ||||||
9980400-C-T | 10142791-C-T | *** | ||||||
9980409-C-T | 10142800-C-T | *** | ||||||
13801406-C-A | 11680700-C-A | *** | ||||||
13803142-C-T | 11682436-C-T | FGC83210 | *** | |||||
22222168-T-A | 20060282-T-A | DYZ19 | *** | |||||
13801459-G-T | 11680753-G-T | *** | ||||||
13841214-G-T | 11720508-G-T | *** | ||||||
13845589-T-A | 11724883-T-A | *** | ||||||
13676504-C-T | 11520828-C-T | *** | ||||||
22245521-A-T | 20083635-A-T | DYZ19 | *** | |||||
13801949-G-A | 11681243-G-A | *** | ||||||
13803313-G-T | 11682607-G-T | S14524 | *** | |||||
13829457-A-C | 11708751-A-C | *** | ||||||
13845414-G-C | 11724708-G-C | *** | ||||||
13866865-A-G | 11746159-A-G | *** | ||||||
9995103-A-C,G | 10157494-A-C,G | *** | ||||||
13704621-T-A,G | 11548945-T-A,G | *** | ||||||
13828795-T-G | 11708089-T-G | BY25810 | *** | |||||
13841211-C-G | 11720505-C-G | *** | ||||||
13803301-A-C | 11682595-A-C | *** | ||||||
22232616-A-G | 20070730-A-G | S841 | DYZ19 | *** | ||||
9992257-T-C | 10154648-T-C | *** | ||||||
10024145-C-G | 10186536-C-G | *** | ||||||
13860195-G-A | 11739489-G-A | *** | ||||||
13860258-T-A | 11739552-T-A | *** | ||||||
13860259-G-T | 11739553-G-T | *** | ||||||
10031818-C-A | 10194209-C-A | *** | ||||||
13455520-G-T | 11299844-G-T | *** | ||||||
13678543-T-C | 11522867-T-C | 4×GAATG | *** | |||||
13837364-T-A | 11716658-T-A | *** | ||||||
13860446-C-A | 11739740-C-A | FT357569 | *** | |||||
13847911-A-T | 11727205-A-T | *** | ||||||
13855131-C-T | 11734425-C-T | FTA21763 | *** | |||||
13856483-C-G | 11735777-C-G | *** | ||||||
13862357-C-A | 11741651-C-A | *** | ||||||
58975536-GCATTCCATTCGATTC-CTATTCCATTTGATTC,G | 56829389-GCATTCCATTCGATTC-CTATTCCATTTGATTC,G | *** | ||||||
13804184-TC-T | 11683478-TC-T | *** | ||||||
13824604-T-A | 11703898-T-A | *** | ||||||
13824606-T-G | 11703900-T-G | *** | ||||||
13824615-A-G | 11703909-A-G | *** | ||||||
13824618-T-A | 11703912-T-A | *** | ||||||
13824635-C-T | 11703929-C-T | FT417982 | *** | |||||
13828348-T-C | 11707642-T-C | *** | ||||||
13828350-C-G | 11707644-C-G | *** | ||||||
13828356-A-G | 11707650-A-G | *** | ||||||
13828387-A-G | 11707681-A-G | *** | ||||||
13828390-G-T | 11707684-G-T | *** | ||||||
13828400-G-A | 11707694-G-A | *** | ||||||
13828401-T-G | 11707695-T-G | *** | ||||||
13828402-G-A | 11707696-G-A | FT99240 | *** | |||||
13855099-T-G | 11734393-T-G | *** | ||||||
13857793-A-C | 11737087-A-C | *** | ||||||
13863584-A-G | 11742878-A-G | *** | ||||||
22503022-C-T | 20341136-C-T | DYZ19 | *** | |||||
9943166-T-A | 10105557-T-A | *** | ||||||
13736413-C-G | 11580737-C-G | *** | ||||||
13822199-G-A | 11701493-G-A | *** | ||||||
13822200-T-A | 11701494-T-A | *** | ||||||
13822231-A-T | 11701525-A-T | BY25771 | *** | |||||
27967355-TAG-T,TAT | 25821208-TAG-T,TAT | P1_Y2 | 14×AG | *** | ||||
10005372-C-T | 10167763-C-T | *** | ||||||
22217446-A-T | 20055560-A-T | DYZ19 | *** | |||||
9991756-T-TC | 10154147-T-TC | *** | ||||||
7494965-A-C | 7626924-A-C | BY17088 | IR1_L | *** | ||||
13678643-C-T | 11522967-C-T | FT448134 | *** | |||||
13804159-C-T | 11683453-C-T | *** | ||||||
13858782-T-A | 11738076-T-A | *** | ||||||
13140475-T-C | 10629961-T-C | *** | ||||||
13312289-A-G | 11156613-A-G | *** | ||||||
14480537-G-T | 12359806-G-T | *** | ||||||
25934941-TA-T | 23788794-TA-T | P1_Y1 | 10×A | *** | ||||
13856722-G-A,GAAATA | 11736016-G-A,GAAATA | *** | ||||||
13863637-A-T | 11742931-A-T | *** | ||||||
13801023-G-T | 11680317-G-T | *** | ||||||
9955350-C-A | 10117741-C-A | *** | ||||||
9980422-G-A | 10142813-G-A | *** | ||||||
9980431-G-C | 10142822-G-C | *** | ||||||
58982638-C-T | 56836491-C-T | *** | ||||||
10020951-G-C | 10183342-G-C | *** | ||||||
13402561-G-T | 11246885-G-T | *** | ||||||
13684379-C-G | 11528703-C-G | *** | ||||||
13848147-T-A | 11727441-T-A | *** | ||||||
13824570-T-C | 11703864-T-C | *** | ||||||
13824642-A-G | 11703936-A-G | 4×AATGG | *** | |||||
13824657-G-C | 11703951-G-C | *** | ||||||
22427316-G-T | 20265430-G-T | DYZ19 | *** | |||||
13819557-A-G | 11698851-A-G | *** | ||||||
10059645-T-C | 10222036-T-C | *** | ||||||
13860474-C-G | 11739768-C-G | *** | ||||||
13678635-A-C | 11522959-A-C | *** | ||||||
13828535-A-T | 11707829-A-T | *** | ||||||
10031838-T-C | 10194229-T-C | *** | ||||||
23195368-TTGTG-T | 21033482-TTGTG-T | 14×TG | *** | |||||
13828526-G-A | 11707820-G-A | *** | ||||||
13403145-A-T | 11247469-A-T | *** | ||||||
13410731-A-G | 11255055-A-G | *** | ||||||
24600422-C-T | 22454275-C-T | P3_t2 | *** | |||||
9959374-A-G | 10121765-A-G | *** | ||||||
22460988-C-G | 20299102-C-G | FGC20570 | DYZ19 | *** | ||||
13858815-C-G | 11738109-C-G | *** | ||||||
10020889-C-CTCTG | 10183280-C-CTCTG | *** | ||||||
10020488-G-A | 10182879-G-A | *** | ||||||
13814570-A-T | 11693864-A-T | *** | ||||||
13828320-T-C | 11707614-T-C | *** | ||||||
13863561-A-G | 11742855-A-G | *** | ||||||
9196232-T-G | 9358623-T-G | *** | ||||||
9963130-G-T | 10125521-G-T | *** | ||||||
10059680-C-CACTA | 10222071-C-CACTA | *** | ||||||
13860365-G-A | 11739659-G-A | *** | ||||||
13804163-A-G | 11683457-A-G | FT451728 | *** | |||||
13828773-C-A | 11708067-C-A | *** | ||||||
13857786-A-T | 11737080-A-T | *** | ||||||
13857787-A-C | 11737081-A-C | *** | ||||||
14937823-A-ATTTTCTTTTCTTTTC | 12825888-A-ATTTTC | 10×TTTTC | *** | |||||
9934902-G-T | 10097293-G-T | *** | ||||||
13453081-A-T | 11297405-A-T | *** | ||||||
6295514-AT-A | 6427473-AT-A | IR3_Dst | 12×T | *** | ||||
13855118-A-C | 11734412-A-C | *** | ||||||
13714482-A-T | 11558806-A-T | A5756 | *** | |||||
10020877-C-G | 10183268-C-G | *** | ||||||
13814566-T-C | 11693860-T-C | *** | ||||||
9963115-G-T | 10125506-G-T | *** | ||||||
13402568-C-CA | 11246892-C-CA | *** | ||||||
13845343-G-A | 11724637-G-A | *** | ||||||
10021465-G-A | 10183856-G-A | BY83067 | *** | |||||
13651893-C-A | 11496217-C-A | *** | ||||||
10008198-T-C | 10170589-T-C | *** | ||||||
19949961-G-A | 17838081-G-A | FGC11976 | P5_Prx | *** | ||||
13659372-A-T | 11503696-A-T | *** | ||||||
13447410-G-A,T | 11291734-G-A,T | *** | ||||||
13828789-A-C | 11708083-A-C | *** | ||||||
13836853-A-T | 11716147-A-T | *** | ||||||
28801706-A-C | 26655559-A-C | *** | ||||||
9980447-G-T | 10142838-G-T | *** | ||||||
58974903-T-G | 56828756-T-G | *** | ||||||
10020491-AAG-A | 10182882-AAG-A | *** | ||||||
13862085-G-GC | 11741379-G-GC | *** | ||||||
13703584-A-ATCAGT | 11547908-A-ATCAGT | *** | ||||||
13703589-A-G | 11547913-A-G | *** | ||||||
13809655-T-C | 11688949-T-C | *** | ||||||
9941304-G-A | 10103695-G-A | *** | ||||||
15558499-T-TAGATAGAC | 13446619-T-TAGATAGAC | 5×AGAC | *** | |||||
13862334-A-C | 11741628-A-C | 4×GAATG | *** | |||||
13856649-A-C | 11735943-A-C | *** | ||||||
26266741-C-T | 24120594-C-T | P1_Y1 | *** | |||||
10019349-G-A | 10181740-G-A | *** | ||||||
22498612-G-A | 20336726-G-A | DYZ19 | *** | |||||
13856656-C-A | 11735950-C-A | *** | ||||||
13836907-A-G | 11716201-A-G | *** | ||||||
13836863-A-G | 11716157-A-G | *** | ||||||
58979285-TTCGAC-T | 56833138-TTCGAC-T | *** | ||||||
13453397-TCCTTTC-T | 11297721-TCCTTTC-T | *** | ||||||
13453418-T-A,C | 11297742-T-A,C | *** | ||||||
13453419-C-A | 11297743-C-A | *** | ||||||
13866039-G-A | 11745333-G-A | *** | ||||||
13866033-CA-C | 11745327-CA-C | *** | ||||||
16533653-CAT-C | 14421773-CAT-C | *** | ||||||
13704308-CGAATGGAATG-C | 11548632-CGAATGGAATG-C | 5×GAATG | *** | |||||
13862369-GGAAGTGAATGCATTA-G | 11741663-GGAAGTGAATGCATTA-G | *** | ||||||
13658768-A-C | 11503092-A-C | *** | ||||||
13828321-G-A | 11707615-G-A | *** | ||||||
28798920-C-T | 26652773-C-T | *** | ||||||
13138248-CTCCAG-C | 10627734-CTCCAG-C | *** | ||||||
9977963-C-A | 10140354-C-A | *** | ||||||
25388623-A-G | 23242476-A-G | P2_r2 | *** | |||||
10019144-A-C | 10181535-A-C | *** | ||||||
13850550-G-T | 11729844-G-T | *** | ||||||
10031844-T-C | 10194235-T-C | *** | ||||||
10066770-C-A,T | 10229161-C-A,T | *** | ||||||
10031842-G-A | 10194233-G-A | *** | ||||||
10005370-A-ATC | 10167761-A-ATC | *** | ||||||
13402491-G-A | 11246815-G-A | BY85258 | *** | |||||
13658792-G-T | 11503116-G-T | *** | ||||||
13143346-C-A | 10632832-C-A | *** | ||||||
22231289-G-T | 20069403-G-T | BY213482 | DYZ19 | *** | ||||
22240480-C-G | 20078594-C-G | DYZ19 | *** | |||||
22240504-G-C | 20078618-G-C | DYZ19 | *** | |||||
22255054-T-A | 20093168-T-A | BY214246 | DYZ19 | *** | ||||
22316950-C-G | 20155064-C-G | BY217248 | DYZ19 | *** | ||||
22316976-C-T | 20155090-C-T | DYZ19 | *** | |||||
22318453-C-A | 20156567-C-A | BY217356 | DYZ19 | *** | ||||
26226898-CAGTCA-C | 24080751-CAGTCA-C | P1_Y1 | *** | |||||
9958953-A-C | 10121344-A-C | *** | ||||||
13463412-C-T | 11307736-C-T | *** | ||||||
22249661-G-T | 20087775-G-T | DYZ19 | *** | |||||
26318196-GT-G | 24172049-GT-G | P1_Y1 | 12×T | *** | ||||
25858637-C-T | 23712490-C-T | P1_Y1 | *** | |||||
58983266-T-C | 56837119-T-C | *** | ||||||
19436744-G-A | 17324864-G-A | *** | ||||||
22232924-G-A | 20071038-G-A | DYZ19 | *** | |||||
6347814-GAGAA-G,GAAAG | 6479773-GAGAA-G,GAAAG | 12×AGAA | *** | |||||
13461709-C-A,G | 11306033-C-A,G | *** | ||||||
14612378-TAGATAGAC-T,TAGATAGAT | 12500584-TAGATAGAC-T,TAGATAGAT | *** | ||||||
19948269-G-T | 17836389-G-T | BY1634 | P5_Prx | *** | ||||
58983233-T-A | 56837086-T-A | *** | ||||||
58974868-G-C | 56828721-G-C | *** | ||||||
20747474-C-T | 18585588-C-T | P4_Prx | *** | |||||
20803638-A-ATG | 18641752-A-ATG | P4_Gap | 11×TG | *** | ||||
22284014-G-T | 20122128-G-T | DYZ19 | *** | |||||
8981718-T-A | 9144109-T-A | *** | ||||||
6139254-G-A | 6271213-G-A | IR3_Dst | *** | |||||
6142156-C-T | 6274115-C-T | IR3_Dst | *** | |||||
6185552-G-A | 6317511-G-A | IR3_Dst | *** | |||||
6211904-C-A | 6343863-C-A | FGC55592 | IR3_Dst | *** | ||||
6276923-CT-C | 6408882-CT-C | IR3_Dst | *** | |||||
6328399-A-G | 6460358-A-G | IR3_Dst | *** | |||||
7461580-G-A | 7593539-G-A | IR1_L | *** | |||||
7494787-T-C | 7626746-T-C | IR1_L | *** | |||||
7730471-GATACATAC-G,GATAGATAC | 7862430-GATACATAC-G,GATAGATAC | 10×ATAC | *** | |||||
9022258-TA-T,TT | 9184649-TA-T,TT | *** | ||||||
9328133-G-A | 9490524-G-A | *** | ||||||
9371317-G-T | 9533708-G-T | *** | ||||||
9764339-AAAGAAAGG-A,AAAGAAAGA | 9926730-AAAGAAAGG-A,AAAGAAAGA | *** | ||||||
9854215-T-TTG | 10016606-T-TTG | *** | ||||||
13323585-A-G | 11167909-A-G | *** | ||||||
14980831-CTT-C,CT | 12868907-CTT-C,CT | 15×T | *** | |||||
18367612-C-T | 16255732-C-T | P6_Prx | *** | |||||
19580936-G-A | 17469056-G-A | P5_Prx | *** | |||||
19596272-T-A | 17484392-T-A | P5_Prx | *** | |||||
19597202-TTTATTATTATTA-T,TTTATTA | 17485322-TTTATTATTATTA-T,TTTATTA | P5_Prx | 12×TTA | *** | ||||
19602238-A-G | 17490358-A-G | P5_Prx | *** | |||||
19602384-C-T | 17490504-C-T | P5_Prx | *** | |||||
19642608-C-T | 17530728-C-T | P5_Prx | *** | |||||
19763505-C-T | 17651625-C-T | P5_Prx | *** | |||||
19766114-C-T | 17654234-C-T | P5_Prx | *** | |||||
19793208-C-T | 17681328-C-T | P5_Prx | *** | |||||
19798756-C-T | 17686876-C-T | P5_Prx | *** | |||||
19826619-C-CA | 17714739-C-CA | P5_Prx | *** | |||||
19869991-G-A | 17758111-G-A | P5_Prx | *** | |||||
19887850-A-C | 17775970-A-C | P5_Prx | *** | |||||
19890287-A-G | 17778407-A-G | P5_Prx | *** | |||||
19920100-T-C | 17808220-T-C | BY212013 | P5_Prx | *** | ||||
19938548-A-G | 17826668-A-G | P5_Prx | *** | |||||
19946558-G-A | 17834678-G-A | P5_Prx | *** | |||||
19974746-C-G | 17862866-C-G | P5_Prx | *** | |||||
20632281-G-T | 18470395-G-T | P4_Prx | *** | |||||
20637629-A-T | 18475743-A-T | P4_Prx | 16×GT | *** | ||||
20692365-G-A | 18530479-G-A | P4_Prx | *** | |||||
20713617-T-C | 18551731-T-C | P4_Prx | *** | |||||
20732752-T-A | 18570866-T-A | BY48834 | P4_Prx | *** | ||||
22229105-T-A | 20067219-T-A | DYZ19 | *** | |||||
22229979-A-T | 20068093-A-T | DYZ19 | *** | |||||
22239754-A-T | 20077868-A-T | DYZ19 | *** | |||||
22241842-G-T | 20079956-G-T | BY213996 | DYZ19 | *** | ||||
22255300-A-C | 20093414-A-C | DYZ19 | *** | |||||
22266694-G-T | 20104808-G-T | E499 BY1903 | DYZ19 | *** | ||||
22269216-G-C | 20107330-G-C | DYZ19 | *** | |||||
22289404-G-T | 20127518-G-T | DYZ19 | *** | |||||
22289588-A-G | 20127702-A-G | DYZ19 | *** | |||||
22290121-C-T | 20128235-C-T | DYZ19 | *** | |||||
22290775-C-A | 20128889-C-A | DYZ19 | *** | |||||
22291199-G-A | 20129313-G-A | DYZ19 | *** | |||||
22291783-T-C | 20129897-T-C | DYZ19 | *** | |||||
22291796-T-C | 20129910-T-C | DYZ19 | *** | |||||
22293099-T-C | 20131213-T-C | DYZ19 | *** | |||||
22294857-C-A | 20132971-C-A | BY216590 | DYZ19 | *** | ||||
22305461-G-C | 20143575-G-C | DYZ19 | *** | |||||
22305868-C-G | 20143982-C-G | ZS10530 | DYZ19 | *** | ||||
22310540-T-C | 20148654-T-C | DYZ19 | *** | |||||
22312692-T-A | 20150806-T-A | BY217117 | DYZ19 | *** | ||||
22313483-T-C | 20151597-T-C | DYZ19 | *** | |||||
22319940-T-C | 20158054-T-C | DYZ19 | *** | |||||
22359991-G-T | 20198105-G-T | DYZ19 | *** | |||||
22361243-G-T | 20199357-G-T | DYZ19 | *** | |||||
22363561-T-C | 20201675-T-C | DYZ19 | *** | |||||
22368006-G-T | 20206120-G-T | DYZ19 | *** | |||||
22424289-G-A | 20262403-G-A | DYZ19 | *** | |||||
22432660-T-G | 20270774-T-G | DYZ19 | *** | |||||
22432841-G-T | 20270955-G-T | DYZ19 | *** | |||||
22435661-T-A | 20273775-T-A | DYZ19 | *** | |||||
22436102-C-T | 20274216-C-T | DYZ19 | *** | |||||
22440615-A-C,T | 20278729-A-C,T | DYZ19 | *** | |||||
22442103-G-A | 20280217-G-A | DYZ19 | *** | |||||
22443042-T-A | 20281156-T-A | DYZ19 | *** | |||||
22445298-T-A | 20283412-T-A | DYZ19 | *** | |||||
22450757-G-A | 20288871-G-A | DYZ19 | *** | |||||
22498565-C-A | 20336679-C-A | DYZ19 | *** | |||||
22498587-A-T | 20336701-A-T | DYZ19 | *** | |||||
22498619-G-T | 20336733-G-T | DYZ19 | *** | |||||
22498620-T-C | 20336734-T-C | DYZ19 | *** | |||||
22498626-G-T | 20336740-G-T | DYZ19 | *** | |||||
22498700-T-A | 20336814-T-A | DYZ19 | *** | |||||
23714963-G-C | 21553077-G-C | *** | ||||||
23730391-TG-T | 21568505-TG-T | *** | ||||||
23851470-A-ATGTG | 21689584-A-ATGTG | 9×TG | *** | |||||
24081741-C-A | 21935594-C-A | P3_b1 | *** | |||||
24088606-G-A | 21942459-G-A | P3_b1 | *** | |||||
24098281-A-G | 21952134-A-G | P3_b1 | *** | |||||
24116493-C-A | 21970346-C-A | P3_b1 | *** | |||||
24177804-G-A | 22031657-G-A | P3_b1 | *** | |||||
24194137-A-G | 22047990-A-G | P3_b1 | *** | |||||
24207753-A-T | 22061606-A-T | P3_b1 | *** | |||||
24217778-G-A | 22071631-G-A | P3_b1 | *** | |||||
24232695-C-A | 22086548-C-A | P3_b1 | *** | |||||
24289229-C-T | 22143082-C-T | P3_t1 | *** | |||||
24313496-C-T | 22167349-C-T | P3_t1 | *** | |||||
24314306-GA-G | 22168159-GA-G | P3_t1 | 10×A | *** | ||||
24317251-G-A | 22171104-G-A | MF2539 | P3_t1 | *** | ||||
24317797-T-C | 22171650-T-C | P3_t1 | *** | |||||
24600420-C-G | 22454273-C-G | P3_t2 | *** | |||||
24600432-C-CTT,T | 22454285-C-CTT,T | P3_t2 | *** | |||||
24692819-C-T | 22546672-C-T | P3_b2 | *** | |||||
24714325-T-C | 22568178-T-C | P3_b2 | *** | |||||
24820081-G-A | 22673934-G-A | P3_b2 | *** | |||||
24833696-G-T | 22687549-G-T | P3_b2 | *** | |||||
24834710-A-C | 22688563-A-C | P3_b2 | *** | |||||
24892936-A-G | 22746789-A-G | FGC54322 | g1 | *** | ||||
24912997-C-T | 22766850-C-T | g1 | *** | |||||
24915628-C-T | 22769481-C-T | g1 | *** | |||||
24942037-G-A | 22795890-G-A | g1 | *** | |||||
24947645-G-A | 22801498-G-A | g1 | *** | |||||
25015520-C-T | 22869373-C-T | g1 | *** | |||||
25022557-C-T | 22876410-C-T | g1 | *** | |||||
25025422-T-C | 22879275-T-C | g1 | *** | |||||
25061890-G-T | 22915743-G-T | g1 | *** | |||||
25096034-T-A | 22949887-T-A | g1 | *** | |||||
25108178-T-C | 22962031-T-C | g1 | *** | |||||
25122714-T-G | 22976567-T-G | g1 | *** | |||||
25136754-A-G | 22990607-A-G | g1 | *** | |||||
25151413-G-T | 23005266-G-T | g1 | *** | |||||
25161945-G-A | 23015798-G-A | g1 | *** | |||||
25171325-A-T | 23025178-A-T | g1 | *** | |||||
25191509-A-C | 23045362-A-C | FGC66046 | g1 | *** | ||||
25230112-A-G | 23083965-A-G | P2_r1 | *** | |||||
25232669-T-C | 23086522-T-C | P2_r1 | *** | |||||
25241912-T-G | 23095765-T-G | P2_r1 | *** | |||||
25282104-C-T | 23135957-C-T | P2_r1 | *** | |||||
25282536-T-C | 23136389-T-C | P2_r1 | *** | |||||
25305724-T-C | 23159577-T-C | P2_r1 | *** | |||||
25414726-T-C | 23268579-T-C | P2_r2 | *** | |||||
25421781-T-A | 23275634-T-A | P2_r2 | *** | |||||
25818012-C-CT | 23671865-C-CT | P1_b3 | *** | |||||
25822317-TAAAC-T | 23676170-TAAAC-T | P1_b3 | *** | |||||
25827462-G-A | 23681315-G-A | P1_b3 | *** | |||||
25872034-T-G | 23725887-T-G | P1_Y1 | *** | |||||
25900045-C-T | 23753898-C-T | P1_Y1 | *** | |||||
25946544-G-A | 23800397-G-A | P1_Y1 | *** | |||||
25952497-A-G | 23806350-A-G | P1_Y1 | *** | |||||
25961712-G-A | 23815565-G-A | P1_Y1 | *** | |||||
25968308-G-A | 23822161-G-A | P1_Y1 | *** | |||||
25981610-A-G | 23835463-A-G | P1_Y1 | *** | |||||
25982589-G-A | 23836442-G-A | P1_Y1 | *** | |||||
25983058-G-A | 23836911-G-A | P1_Y1 | *** | |||||
26151475-T-C | 24005328-T-C | P1_Y1 | *** | |||||
26172174-G-T | 24026027-G-T | P1_Y1 | *** | |||||
26178270-C-T | 24032123-C-T | FGC66222 | P1_Y1 | *** | ||||
26184646-CTTT-C | 24038499-CTTT-C | P1_Y1 | 19×T | *** | ||||
26198090-C-G | 24051943-C-G | P1_Y1 | *** | |||||
26232048-C-T | 24085901-C-T | P1_Y1 | *** | |||||
26263715-A-C | 24117568-A-C | P1_Y1 | *** | |||||
26282843-ATATG-A | 24136696-ATATG-A | P1_Y1 | *** | |||||
26297013-A-G | 24150866-A-G | P1_Y1 | *** | |||||
26325025-C-T | 24178878-C-T | P1_Y1 | *** | |||||
26409073-T-C | 24262926-T-C | P1_Y1 | *** | |||||
26440525-TTTTATTTA-T,TTTTA | 24294378-TTTTATTTA-T,TTTTA | P1_Y1 | 10×TTTA | *** | ||||
26484299-C-A | 24338152-C-A | P1_Y1 | *** | |||||
26659171-T-C | 24513024-T-C | P1_g2 | *** | |||||
26709638-T-A | 24563491-T-A | P1_g2 | *** | |||||
26899460-C-T | 24753313-C-T | P1_r3 | *** | |||||
26902432-A-T | 24756285-A-T | P1_r3 | *** | |||||
26915827-C-T | 24769680-C-T | P1_r3 | *** | |||||
26956018-G-A | 24809871-G-A | P1_r3 | *** | |||||
27007939-T-G | 24861792-T-G | P1_r4 | *** | |||||
27095988-A-G | 24949841-A-G | P1_r4 | *** | |||||
27553364-A-G | 25407217-A-G | P1_Y2 | *** | |||||
28005373-A-G | 25859226-A-G | FGC47068 | P1_Y2 | *** | ||||
28797849-T-C | 26651702-T-C | *** | ||||||
28803160-TGTAGTAAAAA-T,TGTAGTAGAAA | 26657013-TGTAGTAAAAA-T,TGTAGTAGAAA | *** | ||||||
28812953-T-C | 26666806-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.