Stewart
BigY3: 446440, FTDNA: 446440, BigY2: 446440MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 446440 | FTDNA 446440 | BigY2 446440 |
---|---|---|---|---|---|---|---|---|---|---|
10901678-T-A | A* | |||||||||
13684826-G-A | 11529150-G-A | A* | ||||||||
56832504-C-A | A* | |||||||||
13843962-A-G | 11723256-A-G | FT288010 | A* | |||||||
56831689-T-A | A* | |||||||||
13684872-G-T | 11529196-G-T | A* | ||||||||
13684827-G-A | 11529151-G-A | A* | ||||||||
56834216-A-G | A* | |||||||||
15717421-T-A | 13605541-T-A | Y68710 | Y | Y | + | + | + | |||
22458146-G-T | 20296260-G-T | BY43880 | DYZ19 | ** | + | + | ||||
13452092-A-G | 11296416-A-G | * | *** | *** | ||||||
13223689-A-G | 11068013-A-G | ** | ||||||||
15049911-T-C | 12938002-T-C | ** | ||||||||
14563508-C-A | 12451708-C-A | ** | ||||||||
21132671-A-T | 18970785-A-T | ** | ||||||||
58876790-C-A | 56714081-G-T | ** | ||||||||
22318005-T-A | 20156119-T-A | DYZ19 | ** | |||||||
19377072-C-A | 17265192-C-A | ** | ||||||||
18173265-C-A | 16061385-C-A | ** | ||||||||
11015226-A-AC | ** | |||||||||
21132673-A-T | 18970787-A-T | ** | ||||||||
10985786-C-A | ** | |||||||||
10837710-C-A | ** | |||||||||
10756534-A-C | ** | |||||||||
10756547-T-A | ** | |||||||||
10756560-A-T | ** | |||||||||
10756567-T-C | ** | |||||||||
10756584-C-A | ** | |||||||||
21297471-G-T | 19135585-G-T | ** | ||||||||
16601518-G-A | 14489638-G-A | ** | ||||||||
23505131-C-A | 21343245-C-A | ** | ||||||||
14253254-C-CAA | 12132548-C-CAA | 14×A | ** | |||||||
19463621-G-T | 17351741-G-T | ** | ||||||||
56714075-T-A | ** | |||||||||
56714079-A-C | ** | |||||||||
56714128-G-C | ** | |||||||||
4470055-C-A | 4602014-C-A | ** | ||||||||
10668575-AATTTC-A | ** | |||||||||
7029732-C-A | 7161691-C-A | ** | ||||||||
19507126-C-A | 17395246-C-A | ** | ||||||||
11015207-CT-C | ** | |||||||||
10669047-C-A | ** | |||||||||
13643479-C-A | 11487803-C-A | ** | ||||||||
5905442-A-T | 6037401-A-T | ** | ||||||||
13953133-C-A | 11832427-C-A | ** | ||||||||
14470478-C-A | 12349747-C-A | ** | ||||||||
10789915-T-C | ** | |||||||||
3271535-C-A | 3403494-C-A | ** | ||||||||
15904169-ACAC-A | 13792289-ACAC-A | ** | ||||||||
6916101-A-T | 7048060-A-T | ** | ||||||||
10996020-C-A | ** | |||||||||
22300712-T-C | 20138826-T-C | DYZ19 | ** | |||||||
18901129-C-A | 16789249-C-A | ** | ||||||||
9368131-C-A | 9530522-C-A | ** | ||||||||
21846482-C-G | 19684596-C-G | ** | ||||||||
20337575-AT-A | 18175689-AT-A | P5_Dst | ** | |||||||
18780461-C-A | 16668581-C-A | ** | ||||||||
14295496-C-A | 12174790-C-A | ** | ||||||||
16692755-T-A | 14580875-T-A | ** | ||||||||
15424364-C-A | 13312484-C-A | ** | ||||||||
15158727-C-A | 13046813-C-A | ** | ||||||||
15995194-C-A | 13883314-C-A | ** | ||||||||
5112569-G-T | 5244528-G-T | ** | ||||||||
6646869-C-A | 6778828-C-A | ** | ||||||||
13323796-C-A | 11168120-C-A | ** | ||||||||
10787621-C-A | ** | |||||||||
15332326-C-A | 13220444-C-A | ** | ||||||||
7170197-T-A | 7302156-T-A | ** | ||||||||
6690390-C-A | 6822349-C-A | ** | ||||||||
22801742-C-A | 20639856-C-A | ** | ||||||||
15576632-G-A | 13464752-G-A | ** | ||||||||
22655033-C-A | 20493147-C-A | ** | ||||||||
14479591-C-A | 12358860-C-A | ** | ||||||||
14802723-C-A | 12690794-C-A | ** | ||||||||
6791068-C-A | 6923027-C-A | ** | ||||||||
6692942-C-A | 6824901-C-A | ** | ||||||||
4375405-G-T | 4507364-G-T | 10×T | ** | |||||||
19202837-C-A | 17090957-C-A | ** | ||||||||
16601437-T-TA | 14489557-T-TA | ** | ||||||||
16090260-C-A | 13978380-C-A | ** | ||||||||
16044199-C-A | 13932319-C-A | ** | ||||||||
23421070-T-C | 21259184-T-C | FT108443 | ** | |||||||
6092342-C-A | 6224301-C-A | ** | ||||||||
13860501-A-C | 11739795-A-C | ** | ||||||||
13207868-C-A | 11052192-C-A | ** | ||||||||
13597402-C-A | 11441726-C-A | FT446255 | ** | |||||||
2689503-T-A | 2821462-T-A | ** | ||||||||
2769250-A-T | 2901209-A-T | ** | ||||||||
2789221-A-G | 2921180-A-G | ** | ||||||||
2915193-C-A | 3047152-C-A | ** | ||||||||
2975801-T-C | 3107760-T-C | ** | ||||||||
2980266-G-A | 3112225-G-A | ** | ||||||||
2999287-C-A | 3131246-C-A | ** | ||||||||
3034142-C-A | 3166101-C-A | ** | ||||||||
3095059-A-G | 3227018-A-G | ** | ||||||||
3131809-T-C | 3263768-T-C | ** | ||||||||
3164720-G-T | 3296679-G-T | ** | ||||||||
3204052-C-A | 3336011-C-A | ** | ||||||||
3206333-A-G | 3338292-A-G | ** | ||||||||
3217073-T-C | 3349032-T-C | ** | ||||||||
3251964-A-T | 3383923-A-T | ** | ||||||||
3285158-T-C | 3417117-T-C | ** | ||||||||
3393184-T-C | 3525143-T-C | ** | ||||||||
3403453-A-G | 3535412-A-G | ** | ||||||||
3403510-C-T | 3535469-C-T | ** | ||||||||
3533207-A-AT | 3665166-A-AT | 9×T | ** | |||||||
3533323-A-G | 3665282-A-G | ** | ||||||||
3680133-G-T | 3812092-G-T | ** | ||||||||
3688332-C-A | 3820291-C-A | ** | ||||||||
3800002-A-G | 3931961-A-G | ** | ||||||||
3831015-CA-C | 3962974-CA-C | ** | ||||||||
3836348-G-A | 3968307-G-A | ** | ||||||||
3925810-T-A | 4057769-T-A | ** | ||||||||
3925851-T-G | 4057810-T-G | ** | ||||||||
3944526-C-A | 4076485-C-A | ** | ||||||||
3984081-A-G | 4116040-A-G | ** | ||||||||
3986351-G-T | 4118310-G-T | ** | ||||||||
3995379-C-A | 4127338-C-A | ** | ||||||||
4003177-T-A | 4135136-T-A | ** | ||||||||
4065888-GA-G | 4197847-GA-G | ** | ||||||||
4076158-G-T | 4208117-G-T | ** | ||||||||
4138986-G-T | 4270945-G-T | ** | ||||||||
4201044-C-A | 4333003-C-A | ** | ||||||||
4222409-C-A | 4354368-C-A | ** | ||||||||
4356999-C-A | 4488958-C-A | ** | ||||||||
4398483-T-C | 4530442-T-C | FT16432 | ** | |||||||
4401601-A-T | 4533560-A-T | ** | ||||||||
4427023-C-A | 4558982-C-A | ** | ||||||||
4428179-A-T | 4560138-A-T | ** | ||||||||
4445041-G-T | 4577000-G-T | ** | ||||||||
4449224-C-A | 4581183-C-A | ** | ||||||||
4457470-C-A | 4589429-C-A | ** | ||||||||
4523696-T-C | 4655655-T-C | ** | ||||||||
4527858-C-A | 4659817-C-A | ** | ||||||||
4529437-C-T | 4661396-C-T | ** | ||||||||
4537846-G-A | 4669805-G-A | FT269038 | ** | |||||||
4537851-C-A | 4669810-C-A | ** | ||||||||
4547788-T-C | 4679747-T-C | ** | ||||||||
4604246-A-G | 4736205-A-G | FT415462 | ** | |||||||
4625867-C-A | 4757826-C-A | ** | ||||||||
4626068-T-A | 4758027-T-A | ** | ||||||||
4626116-C-A | 4758075-C-A | ** | ||||||||
4645912-A-C | 4777871-A-C | ** | ||||||||
4756842-G-A | 4888801-G-A | ** | ||||||||
4840059-C-A | 4972018-C-A | ** | ||||||||
4864334-G-T | 4996293-G-T | ** | ||||||||
4888444-G-T | 5020403-G-T | ** | ||||||||
4968238-C-T | 5100197-C-T | ** | ||||||||
5023901-GA-G | 5155860-GA-G | ** | ||||||||
5189433-A-T | 5321392-A-T | ** | ||||||||
5206332-T-C | 5338291-T-C | ** | ||||||||
5211833-T-A | 5343792-T-A | ** | ||||||||
5220243-A-G | 5352202-A-G | ** | ||||||||
5225117-C-A | 5357076-C-A | ** | ||||||||
5231056-C-A | 5363015-C-A | ** | ||||||||
5267100-C-A | 5399059-C-A | ** | ||||||||
5406375-G-T | 5538334-G-T | ** | ||||||||
5534754-C-A | 5666713-C-A | ** | ||||||||
5550976-G-T | 5682935-G-T | ** | ||||||||
5576722-A-G | 5708681-A-G | ** | ||||||||
5609612-G-C | 5741571-G-C | ** | ||||||||
5687420-C-A | 5819379-C-A | ** | ||||||||
5799766-G-A | 5931725-G-A | ** | ||||||||
5817581-T-A | 5949540-T-A | ** | ||||||||
5824087-C-A | 5956046-C-A | ** | ||||||||
6072613-G-T | 6204572-G-T | ** | ||||||||
6358837-C-T | 6490796-C-T | ** | ||||||||
6509035-A-T | 6640994-A-T | ** | ||||||||
6509080-C-A | 6641039-C-A | ** | ||||||||
6519318-GA-G | 6651277-GA-G | 9×A | ** | |||||||
6580098-C-A | 6712057-C-A | ** | ||||||||
6720444-T-G | 6852403-T-G | ** | ||||||||
6720454-A-C | 6852413-A-C | ** | ||||||||
6729209-A-T | 6861168-A-T | ** | ||||||||
6878030-C-A | 7009989-C-A | ** | ||||||||
6892337-A-G | 7024296-A-G | ** | ||||||||
6926554-G-A | 7058513-G-A | ** | ||||||||
7048478-G-A | 7180437-G-A | ** | ||||||||
7094847-C-G | 7226806-C-G | ** | ||||||||
7105058-G-A | 7237017-G-A | ** | ||||||||
7114923-G-T | 7246882-G-T | ** | ||||||||
7182160-C-A | 7314119-C-A | ** | ||||||||
7254701-G-T | 7386660-G-T | ** | ||||||||
7306480-CA-C | 7438439-CA-C | ** | ||||||||
7391957-G-A | 7523916-G-A | ** | ||||||||
7430611-C-A | 7562570-C-A | ** | ||||||||
7444157-C-G | 7576116-C-G | ** | ||||||||
7704628-C-A | 7836587-C-A | ** | ||||||||
7757192-T-A | 7889151-T-A | ** | ||||||||
8090814-G-A | 8222773-G-A | ** | ||||||||
8342964-G-T | 8474923-G-T | ** | ||||||||
8385554-G-T | 8517513-G-T | ** | ||||||||
8856650-C-A | 8988609-C-A | ** | ||||||||
8983379-A-T | 9145770-A-T | ** | ||||||||
9025496-A-G | 9187887-A-G | ** | ||||||||
9076175-C-A | 9238566-C-A | ** | ||||||||
9078021-C-T | 9240412-C-T | ** | ||||||||
9140107-C-A | 9302498-C-A | ** | ||||||||
9211362-C-A | 9373753-C-A | ** | ||||||||
9508957-G-T | 9671348-G-T | ** | ||||||||
9764157-G-A | 9926548-G-A | ** | ||||||||
9927518-T-A | 10089909-T-A | ** | ||||||||
9930067-TG-T | 10092458-TG-T | ** | ||||||||
9930427-C-G | 10092818-C-G | ** | ||||||||
9930505-C-A | 10092896-C-A | ** | ||||||||
9934945-A-T | 10097336-A-T | ** | ||||||||
9938576-T-A | 10100967-T-A | ** | ||||||||
9968543-C-A | 10130934-C-A | ** | ||||||||
9976408-G-T | 10138799-G-T | ** | ||||||||
9997952-A-G | 10160343-A-G | ** | ||||||||
10655205-A-G | ** | |||||||||
10661658-C-A | ** | |||||||||
10671920-T-A | ** | |||||||||
10671976-C-A | ** | |||||||||
10683152-C-A | ** | |||||||||
10758553-C-T | ** | |||||||||
10789887-T-A | ** | |||||||||
10789900-T-C | ** | |||||||||
10789910-T-C | ** | |||||||||
10802074-T-C | ** | |||||||||
10816509-T-G | ** | |||||||||
10819635-TCATTC-T | ** | |||||||||
10821390-T-A | ** | |||||||||
10828781-C-A | ** | |||||||||
10842068-C-A | ** | |||||||||
10846601-C-A | ** | |||||||||
10846993-C-T | ** | |||||||||
10847000-A-G | ** | |||||||||
10855857-C-T | ** | |||||||||
10861606-T-C | ** | |||||||||
10892505-T-G | ** | |||||||||
10901163-G-T | ** | |||||||||
10927666-C-A | ** | |||||||||
10938341-C-A | ** | |||||||||
10939972-C-A | ** | |||||||||
10943879-C-A | ** | |||||||||
10946098-T-G | ** | |||||||||
10954431-C-A | ** | |||||||||
10955571-C-A | ** | |||||||||
10956361-T-C | ** | |||||||||
10974371-A-G | FT438745 | ** | ||||||||
10980135-C-A | ** | |||||||||
10982319-A-C | ** | |||||||||
10986972-C-A | ** | |||||||||
10989019-T-G | ** | |||||||||
11003537-A-G | ** | |||||||||
11004046-T-C | ** | |||||||||
11007978-T-C | ** | |||||||||
11013558-C-A | ** | |||||||||
11015212-C-A | ** | |||||||||
11015213-TGCAC-T | ** | |||||||||
11015253-C-A | ** | |||||||||
11015767-C-A | ** | |||||||||
11018447-C-A | ** | |||||||||
11018522-T-G | ** | |||||||||
11019309-C-A | ** | |||||||||
11024576-T-A | ** | |||||||||
11029303-T-C | ** | |||||||||
11031298-C-G | ** | |||||||||
11031792-CT-C | ** | |||||||||
11031959-T-C | ** | |||||||||
11033370-T-C | ** | |||||||||
11033417-C-A | ** | |||||||||
11033442-C-G | ** | |||||||||
13212461-C-A | 11056785-C-A | ** | ||||||||
13319124-G-A | 11163448-G-A | ** | ||||||||
13402859-G-T | 11247183-G-T | ** | ||||||||
13477515-C-A | 11321839-C-A | ** | ||||||||
13566688-G-T | 11411012-G-T | ** | ||||||||
13576122-CTTTT-C | 11420446-CTTTT-C | 14×T | ** | |||||||
13596314-T-G | 11440638-T-G | ** | ||||||||
13695492-G-A | 11539816-G-A | ** | ||||||||
13711419-T-G | 11555743-T-G | ** | ||||||||
11647833-A-T | ** | |||||||||
11652666-T-A | ** | |||||||||
11671420-C-T | FT451201 | ** | ||||||||
11672492-G-T | ** | |||||||||
11674842-G-A | ** | |||||||||
13855911-A-T | 11735205-A-T | ** | ||||||||
13895006-C-A | 11774300-C-A | ** | ||||||||
13927334-G-T | 11806628-G-T | ** | ||||||||
13938558-C-A | 11817852-C-A | ** | ||||||||
14032137-G-T | 11911431-G-T | ** | ||||||||
14047962-C-A | 11927256-C-A | ** | ||||||||
14077859-G-A | 11957153-G-A | ** | ||||||||
14181309-A-G | 12060603-A-G | ** | ||||||||
14224411-C-A | 12103705-C-A | ** | ||||||||
14226520-C-A | 12105814-C-A | ** | ||||||||
14324592-G-C | 12203886-G-C | ** | ||||||||
14352187-C-A | 12231482-C-A | ** | ||||||||
14366505-C-A | 12245800-C-A | ** | ||||||||
14387648-C-A | 12266944-C-A | ** | ||||||||
14461240-T-C | 12340513-T-C | ** | ||||||||
14470424-C-A | 12349693-C-A | ** | ||||||||
14499870-C-A | 12388075-C-A | ** | ||||||||
14507819-C-A | 12396024-C-A | ** | ||||||||
14620439-G-T | 12508637-G-T | ** | ||||||||
14721655-C-T | 12609723-C-T | ** | ||||||||
14766654-G-A | 12654723-G-A | ** | ||||||||
14768496-C-T | 12656565-C-T | ** | ||||||||
14919333-C-G | 12807398-C-G | ** | ||||||||
14985132-C-A | 12873200-C-A | ** | ||||||||
14986546-C-A | 12874614-C-A | ** | ||||||||
15115617-G-T | 13003704-G-T | ** | ||||||||
15287315-G-T | 13175414-G-T | ** | ||||||||
15400409-C-A | 13288529-C-A | ** | ||||||||
15406754-A-G | 13294874-A-G | ** | ||||||||
15576636-A-T | 13464756-A-T | ** | ||||||||
15576644-C-G | 13464764-C-G | ** | ||||||||
15576646-T-G | 13464766-T-G | ** | ||||||||
15622485-C-A | 13510605-C-A | ** | ||||||||
15739779-C-A | 13627899-C-A | ** | ||||||||
15756453-C-A | 13644573-C-A | ** | ||||||||
15808941-CA-C | 13697061-CA-C | ** | ||||||||
15912121-G-A | 13800241-G-A | ** | ||||||||
15912122-C-A | 13800242-C-A | ** | ||||||||
15912123-A-G | 13800243-A-G | ** | ||||||||
15912129-G-A | 13800249-G-A | ** | ||||||||
15987369-A-T | 13875489-A-T | ** | ||||||||
15987511-T-C | 13875631-T-C | ** | ||||||||
15997490-C-A | 13885610-C-A | ** | ||||||||
16004922-G-T | 13893042-G-T | ** | ||||||||
16006943-T-C | 13895063-T-C | ** | ||||||||
16240793-T-C | 14128913-T-C | ** | ||||||||
16245361-C-A | 14133481-C-A | ** | ||||||||
16417387-C-A | 14305507-C-A | ** | ||||||||
16424945-G-T | 14313065-G-T | ** | ||||||||
16429674-G-T | 14317794-G-T | ** | ||||||||
16526809-C-A | 14414929-C-A | ** | ||||||||
16601435-A-C | 14489555-A-C | ** | ||||||||
16601464-A-T | 14489584-A-T | ** | ||||||||
16601511-G-T | 14489631-G-T | ** | ||||||||
16601526-G-A | 14489646-G-A | ** | ||||||||
16601530-G-A | 14489650-G-A | ** | ||||||||
16601556-C-A | 14489676-C-A | ** | ||||||||
16601557-C-T | 14489677-C-T | ** | ||||||||
16601572-G-T | 14489692-G-T | ** | ||||||||
16620336-A-C | 14508456-A-C | ** | ||||||||
16624199-T-C | 14512319-T-C | ** | ||||||||
16624282-G-T | 14512402-G-T | FTA23938 | ** | |||||||
16624322-G-T | 14512442-G-T | ** | ||||||||
16662840-A-G | 14550960-A-G | ** | ||||||||
16678493-T-C | 14566613-T-C | ** | ||||||||
16678504-A-G | 14566624-A-G | ** | ||||||||
16678506-T-C | 14566626-T-C | ** | ||||||||
16678517-T-C | 14566637-T-C | ** | ||||||||
16678518-T-C | 14566638-T-C | ** | ||||||||
16678524-C-A | 14566644-C-A | ** | ||||||||
16678526-T-TG | 14566646-T-TG | ** | ||||||||
16678538-G-C | 14566658-G-C | ** | ||||||||
16678539-G-C | 14566659-G-C | ** | ||||||||
16828939-G-A | 14717059-G-A | ** | ||||||||
16981291-T-A | 14869411-T-A | ** | ||||||||
16990306-T-C | 14878426-T-C | ** | ||||||||
17004523-G-C | 14892643-G-C | ** | ||||||||
17043026-C-T | 14931146-C-T | ** | ||||||||
17277284-T-C | 15165404-T-C | ** | ||||||||
17466570-C-A | 15354690-C-A | ** | ||||||||
17548361-T-G | 15436481-T-G | ** | ||||||||
17667000-C-A | 15555120-C-A | ** | ||||||||
17722673-A-C | 15610793-A-C | ** | ||||||||
17756689-C-A | 15644809-C-A | ** | ||||||||
17907948-T-C | 15796068-T-C | ** | ||||||||
17923902-G-T | 15812022-G-T | ** | ||||||||
17964137-A-G | 15852257-A-G | ** | ||||||||
17997722-A-T | 15885842-A-T | P7_Gap | ** | |||||||
18185042-T-C | 16073162-T-C | ** | ||||||||
18186157-T-A | 16074277-T-A | ** | ||||||||
18631053-T-G | 16519173-T-G | ** | ||||||||
18631060-G-T | 16519180-G-T | ** | ||||||||
18747085-C-G | 16635205-C-G | ** | ||||||||
18747130-A-G | 16635250-A-G | ** | ||||||||
18792372-G-A | 16680492-G-A | ** | ||||||||
18819432-C-A | 16707552-C-A | ** | ||||||||
18990852-C-A | 16878972-C-A | ** | ||||||||
19012510-T-C | 16900630-T-C | ** | ||||||||
19183847-G-TTT | 17071967-G-TTT | ** | ||||||||
19223129-G-T | 17111249-G-T | ** | ||||||||
19302397-G-T | 17190517-G-T | ** | ||||||||
19375465-A-G | 17263585-A-G | ** | ||||||||
19517238-C-A | 17405358-C-A | ** | ||||||||
19544587-T-C | 17432707-T-C | ** | ||||||||
19675568-T-A | 17563688-T-A | P5_Prx | ** | |||||||
19820053-T-C | 17708173-T-C | P5_Prx | ** | |||||||
19892869-T-G | 17780989-T-G | P5_Prx | ** | |||||||
20275522-CT-C | 18113636-CT-C | P5_Dst | ** | |||||||
20825020-A-T | 18663134-A-T | P4_Gap | ** | |||||||
21076974-C-A | 18915088-C-A | ** | ||||||||
21268043-C-A | 19106157-C-A | ** | ||||||||
21412296-TTA-T | 19250410-TTA-T | ** | ||||||||
21438179-A-T | 19276293-A-T | ** | ||||||||
21491034-G-T | 19329148-G-T | ** | ||||||||
21495588-C-A | 19333702-C-A | ** | ||||||||
21522349-C-A | 19360463-C-A | ** | ||||||||
21555478-C-T | 19393592-C-T | ** | ||||||||
21555480-C-T | 19393594-C-T | ** | ||||||||
21555481-A-G | 19393595-A-G | ** | ||||||||
21555482-T-C | 19393596-T-C | ** | ||||||||
21555492-T-C | 19393606-T-C | ** | ||||||||
21555497-T-G | 19393611-T-G | ** | ||||||||
21555504-A-G | 19393618-A-G | ** | ||||||||
21834242-A-T | 19672356-A-T | ** | ||||||||
22188763-C-A | 20026877-C-A | ** | ||||||||
22325184-T-C | 20163298-T-C | DYZ19 | ** | |||||||
22529600-C-A | 20367714-C-A | ** | ||||||||
22536053-A-T | 20374167-A-T | ** | ||||||||
22775322-C-A | 20613436-C-A | ** | ||||||||
22880787-C-A | 20718901-C-A | ** | ||||||||
22983776-G-A | 20821890-G-A | ** | ||||||||
23004693-T-C | 20842807-T-C | ** | ||||||||
23006766-T-A | 20844880-T-A | ** | ||||||||
23052202-G-C | 20890316-G-C | ** | ||||||||
23079081-T-A | 20917195-T-A | ** | ||||||||
23091916-G-T | 20930030-G-T | FT26392 | ** | |||||||
23098164-G-A | 20936278-G-A | ** | ||||||||
23127492-C-A | 20965606-C-A | ** | ||||||||
23128576-A-T | 20966690-A-T | ** | ||||||||
23449170-T-A | 21287284-T-A | ** | ||||||||
23476032-GTT-G | 21314146-GTT-G | 10×T | ** | |||||||
23789227-C-A | 21627341-C-A | ** | ||||||||
24403679-C-A | 22257532-C-A | ** | ||||||||
24432862-A-G | 22286715-A-G | ** | ||||||||
24602332-T-G | 22456185-T-G | P3_t2 | ** | |||||||
25947217-T-TG | 23801070-T-TG | P1_Y1 | ** | |||||||
26247614-C-A | 24101467-C-A | P1_Y1 | ** | |||||||
26354725-C-A | 24208578-C-A | P1_Y1 | ** | |||||||
26478107-AAAAAG-A | 24331960-AAAAAG-A | P1_Y1 | ** | |||||||
27636244-T-G | 25490097-T-G | P1_Y2 | ** | |||||||
27701715-G-T | 25555568-G-T | P1_Y2 | ** | |||||||
28478362-T-C | 26332215-T-C | ** | ||||||||
28479098-C-A | 26332951-C-A | ** | ||||||||
28480921-C-A | 26334774-C-A | ** | ||||||||
28492504-A-G | 26346357-A-G | ** | ||||||||
28505342-C-A | 26359195-C-A | ** | ||||||||
28511194-A-T | 26365047-A-T | ** | ||||||||
28519032-C-A | 26372885-C-A | ** | ||||||||
28545809-T-C | 26399662-T-C | ** | ||||||||
28555188-C-G | 26409041-C-G | ** | ||||||||
28560053-C-A | 26413906-C-A | ** | ||||||||
28597412-T-C | 26451265-T-C | ** | ||||||||
28648356-T-G | 26502209-T-G | ** | ||||||||
28653827-A-C | 26507680-A-C | ** | ||||||||
28653890-G-C | 26507743-G-C | ** | ||||||||
56838345-G-T | ** | |||||||||
56838841-C-A | ** | |||||||||
56841968-C-A | ** | |||||||||
56844808-A-G | ** | |||||||||
56847271-G-T | ** | |||||||||
56859009-G-A | ** | |||||||||
56880528-G-T | ** | |||||||||
10597-G-T | ** | |||||||||
9333964-G-A | 9496355-G-A | ** | ||||||||
21380680-T-C | 19218794-T-C | ** | ||||||||
27967423-C-A | 25821276-C-A | P1_Y2 | ** | |||||||
3566629-C-A | 3698588-C-A | ** | ||||||||
10652011-C-A | ** | |||||||||
2790729-T-C | 2922688-T-C | ** | ||||||||
3451740-G-C | 3583699-G-C | ** | ||||||||
3566628-T-G | 3698587-T-G | ** | ||||||||
4826439-TATATACACAC-T | 4958398-TATATACACAC-T | ** | ||||||||
5088457-T-TC | 5220416-T-TC | ** | ||||||||
9033079-C-A | 9195470-C-A | ** | ||||||||
10078243-T-C | 10240634-T-C | ** | ||||||||
13581445-T-C | 11425769-T-C | ** | ||||||||
13963824-ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-A | 11843118-ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-A | 49×T | ** | |||||||
16653406-A-C | 14541526-A-C | ** | ||||||||
16665453-T-G | 14553573-T-G | ** | ||||||||
18796838-A-C | 16684958-A-C | ** | ||||||||
23016792-A-G | 20854906-A-G | ** | ||||||||
24388110-A-G | 22241963-A-G | ** | ||||||||
2663712-T-A | 2795671-T-A | Y1831 FGC2468 | *** | |||||||
7361976-G-T | 7493935-G-T | *** | ||||||||
3271600-A-T | 3403559-A-T | *** | ||||||||
13849691-A-G | 11728985-A-G | *** | ||||||||
13849697-T-G | 11728991-T-G | *** | ||||||||
13810918-G-A | 11690212-G-A | *** | ||||||||
17760347-CTT-C,CT | 15648467-CTT-C,CT | 14×T | *** | |||||||
13487747-C-G | 11332071-C-G | *** | ||||||||
15950494-C-T | 13838614-C-T | FT91231 | *** | |||||||
25737153-G-T | 23591006-G-T | P1_b3 | *** | |||||||
18951707-TAATA-T | 16839827-TAATA-T | 4×AATA | *** | |||||||
14377787-C-A | 12257083-C-A | A340 | *** | |||||||
11028173-T-C | *** | |||||||||
4241553-C-A | 4373512-C-A | *** | ||||||||
5494807-C-A | 5626766-C-A | *** | ||||||||
7106982-GCTCTCT-G,GCT | 7238941-GCTCTCT-G,GCT | 15×CT | *** | |||||||
7318975-C-A | 7450934-C-A | *** | ||||||||
8866031-G-A | 8997990-G-A | *** | ||||||||
9440153-A-G | 9602544-A-G | *** | ||||||||
9440161-T-A | 9602552-T-A | *** | ||||||||
10031940-C-A | 10194331-C-A | *** | ||||||||
10794643-G-C | *** | |||||||||
10799587-C-A | *** | |||||||||
11007868-C-A | *** | |||||||||
13881136-C-A | 11760430-C-A | *** | ||||||||
13960976-CAAAA-C | 11840270-CAAAA-C | 14×A | *** | |||||||
14159540-A-T | 12038834-A-T | *** | ||||||||
14180849-C-A | 12060143-C-A | *** | ||||||||
15375971-G-A | 13264091-G-A | *** | ||||||||
15430590-C-A | 13318710-C-A | *** | ||||||||
15653265-T-C | 13541385-T-C | *** | ||||||||
15656787-C-A | 13544907-C-A | *** | ||||||||
16056771-C-G | 13944891-C-G | *** | ||||||||
18085277-C-A | 15973397-C-A | *** | ||||||||
19037851-T-A | 16925971-T-A | *** | ||||||||
19103880-GTT-G | 16992000-GTT-G | 13×T | *** | |||||||
23096733-C-A | 20934847-C-A | *** | ||||||||
23126871-C-A | 20964985-C-A | *** | ||||||||
26921841-C-T | 24775694-C-T | P1_r3 | *** | |||||||
28686423-CA-C,CAA | 26540276-CA-C,CAA | 21×A | *** | |||||||
13709009-G-T | 11553333-G-T | *** | ||||||||
17006672-C-T | 14894792-C-T | *** | ||||||||
8278644-CT-C | 8410603-CT-C | *** | ||||||||
7162311-C-T | 7294270-C-T | *** | ||||||||
9041097-CAG-C | 9203488-CAG-C | *** | ||||||||
9041106-G-GTC | 9203497-G-GTC | *** | ||||||||
10795082-CATTCCATTCC-C,CATTCCATTCCATTGT | *** | |||||||||
13299398-A-G | 11143722-A-G | *** | ||||||||
13343455-G-C | 11187779-G-C | *** | ||||||||
13455680-G-C | 11300004-G-C | *** | ||||||||
14995443-A-G | 12883528-A-G | *** | ||||||||
15439267-TA-T | 13327387-TA-T | *** | ||||||||
15623159-A-T | 13511279-A-T | *** | ||||||||
15690709-A-T | 13578829-A-T | *** | ||||||||
18796849-A-T | 16684969-A-T | *** | ||||||||
19494649-A-G | 17382769-A-G | *** | ||||||||
21056747-T-G | 18894861-T-G | *** | ||||||||
21746951-C-T | 19585065-C-T | *** | ||||||||
22692611-T-C | 20530725-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.