Thompson
BigY3: 378155, FTDNA: 378155, BigY2: 378155Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 378155 | FTDNA 378155 | BigY2 378155 |
|---|---|---|---|---|---|---|---|---|---|
| hg19:Y:6176851-A-G hg38:Y:6308810-A-G | IR3_Dst | *** | A* | ||||||
| hg19:Y:6318840-G-C hg38:Y:6450799-G-C | IR3_Dst | *** | A* | ||||||
| hg19:Y:19845237-A-T hg38:Y:17733357-A-T | P5_Prx | *** | A* | ||||||
| hg19:Y:19921524-A-G hg38:Y:17809644-A-G | P5_Prx | *** | A* | ||||||
| hg19:Y:20018749-T-C hg38:Y:17906869-T-C | P5_Prx | *** | A* | ||||||
| hg19:Y:20751986-T-A hg38:Y:18590100-T-A | P4_Prx | *** | A* | ||||||
| hg19:Y:23587955-G-A hg38:Y:21426069-G-A | BY23492 | BY24771 | Y | Y | + | + | |||
| hg19:Y:13670159-C-T hg38:Y:11514483-C-T | Y23589 | BY21590 | DYZ17 | + | + | ||||
| hg19:Y:2705669-G-A hg38:Y:2837628-G-A | Y44760 | Y | Y | + | + | ||||
| hg19:Y:2796949-G-C hg38:Y:2928908-G-C | Y44861 | Y | Y | + | + | ||||
| hg19:Y:2813255-A-T hg38:Y:2945214-A-T | Y44884 | Y | Y | + | + | ||||
| hg19:Y:8447140-A-G hg38:Y:8579099-A-G | Y47312 | Y | Y | + | + | ||||
| hg19:Y:8772706-C-T hg38:Y:8904665-C-T | Y47866 | Y | Y | + | + | ||||
| hg19:Y:9983009-G-T hg38:Y:10145400-G-T | BY41682 | Y | *** | + | |||||
| hg19:Y:14597484-CCTT-C hg38:Y:12485684-CCTT-C | + | *** | |||||||
| hg19:Y:14729606-A-T hg38:Y:12617674-A-T | BY16584 | Y | Y | + | + | ||||
| hg19:Y:14784530-A-G hg38:Y:12672600-A-G | Y49873 | Y | Y | + | + | ||||
| hg19:Y:15425220-C-G hg38:Y:13313340-C-G | BY16585 | Y | Y | + | + | ||||
| hg19:Y:17344307-A-T hg38:Y:15232427-A-T | BY16586 | Y | Y | + | + | ||||
| hg19:Y:17909039-A-C hg38:Y:15797159-A-C | Y53905 | Y | Y | + | + | ||||
| hg19:Y:18024173-G-A hg38:Y:15912293-G-A | Y54069 | Y | + | + | |||||
| hg19:Y:18550979-G-T hg38:Y:16439099-G-T | Y54602 | Y | + | + | |||||
| hg19:Y:18564235-T-A hg38:Y:16452355-T-A | BY16587 | Y | Y | + | + | ||||
| hg19:Y:21911337-G-A hg38:Y:19749451-G-A | BY136423 | Y | Y | + | + | ||||
| hg19:Y:22022223-C-T hg38:Y:19860337-C-T | YP6230 | Y | Y | + | + | ||||
| hg19:Y:22294006-G-A hg38:Y:20132120-G-A | Y57816 | DYZ19 | + | + | |||||
| hg19:Y:22298295-G-C hg38:Y:20136409-G-C | BY41990 | DYZ19 | *** | + | |||||
| hg19:Y:22887009-C-T hg38:Y:20725123-C-T | Y58405 | Y | Y | + | + | ||||
| hg19:Y:23383349-T-C hg38:Y:21221463-T-C | BY16588 | Y | Y | + | + | ||||
| hg19:Y:23865836-T-C hg38:Y:21703950-T-C | BY16589 | Y | + | + | |||||
| hg19:Y:22280669-C-A hg38:Y:20118783-C-A | BY215959 | DYZ19 | *** | * | |||||
| hg19:Y:7029456-CCT-C hg38:Y:7161415-CCT-C | ** | ||||||||
| hg19:Y:8095647-A-T hg38:Y:8227606-A-T | ** | ||||||||
| hg19:Y:21146441-TG-T hg38:Y:18984555-TG-T | ** | ||||||||
| hg19:Y:21269482-C-A hg38:Y:19107596-C-A | FGC57988 | ** | |||||||
| hg19:Y:13485864-G-T hg38:Y:11330188-G-T | ** | ||||||||
| hg19:Y:8171876-C-A hg38:Y:8303835-C-A | ** | ||||||||
| hg19:Y:22479666-C-A hg38:Y:20317780-C-A | DYZ19 | *** | ** | ||||||
| hg19:Y:22505889-G-A hg38:Y:20344003-G-A | DYZ19 | ** | ** | ||||||
| hg19:Y:15138012-CTTTTT-C hg38:Y:13026099-CTTTTT-C | 15×T | ** | |||||||
| hg19:Y:21371729-C-A hg38:Y:19209843-C-A | ** | ||||||||
| hg19:Y:21201278-C-A hg38:Y:19039392-C-A | ** | ||||||||
| hg19:Y:15103726-C-A hg38:Y:12991814-C-A | FTA39401 | ** | |||||||
| hg19:Y:17474808-C-A hg38:Y:15362928-C-A | ** | ||||||||
| hg19:Y:8291008-C-A hg38:Y:8422967-C-A | ** | ||||||||
| hg19:Y:28610247-C-A hg38:Y:26464100-C-A | ** | ||||||||
| hg19:Y:23723545-AT-A hg38:Y:21561659-AT-A | ** | ||||||||
| hg19:Y:21770125-C-A hg38:Y:19608239-C-A | ** | ||||||||
| hg19:Y:23274739-C-A hg38:Y:21112853-C-A | 18×T | ** | |||||||
| hg19:Y:16095857-C-A hg38:Y:13983977-C-A | ** | ||||||||
| hg19:Y:19389738-AAG-A hg38:Y:17277858-AAG-A | ** | ||||||||
| hg38:Y:11656217-C-A | DYZ17 | ** | |||||||
| hg19:Y:17802165-GT-G hg38:Y:15690285-GT-G | ** | ||||||||
| hg19:Y:14551546-C-A hg38:Y:12439747-C-A | ** | ||||||||
| hg19:Y:28537868-C-A hg38:Y:26391721-C-A | ** | ||||||||
| hg19:Y:15452229-A-C hg38:Y:13340349-A-C | ** | ||||||||
| hg19:Y:13306136-C-A hg38:Y:11150460-C-A | ** | ||||||||
| hg19:Y:2839997-C-A hg38:Y:2971956-C-A | ** | ||||||||
| hg38:Y:11669594-C-A | DYZ17 | ** | |||||||
| hg19:Y:5084704-C-A hg38:Y:5216663-C-A | ** | ||||||||
| hg19:Y:6435939-G-T hg38:Y:6567898-G-T | ** | ||||||||
| hg38:Y:10776556-C-T | ** | ||||||||
| hg19:Y:6086032-C-A hg38:Y:6217991-C-A | ** | ||||||||
| hg38:Y:10691216-C-A | ** | ||||||||
| hg19:Y:6752591-C-A hg38:Y:6884550-C-A | ** | ||||||||
| hg19:Y:13938035-C-A hg38:Y:11817329-C-A | ** | ||||||||
| hg38:Y:10973991-C-A | ** | ||||||||
| hg38:Y:10974013-A-C | ** | ||||||||
| hg19:Y:13238250-C-A hg38:Y:11082574-C-A | ** | ||||||||
| hg19:Y:18309163-T-C hg38:Y:16197283-T-C | P6_Prx | ** | |||||||
| hg19:Y:21823153-C-A hg38:Y:19661267-C-A | ** | ||||||||
| hg19:Y:9352957-C-A hg38:Y:9515348-C-A | ** | ||||||||
| hg19:Y:2806232-AG-A hg38:Y:2938191-AG-A | ** | ||||||||
| hg19:Y:19829300-T-C hg38:Y:17717420-T-C | P5_Prx | ** | |||||||
| hg19:Y:21703159-C-A hg38:Y:19541273-C-A | ** | ||||||||
| hg19:Y:26100545-G-TTTT hg38:Y:23954398-G-TTTT | P1_Y1 | ** | |||||||
| hg19:Y:19043057-G-T hg38:Y:16931177-G-T | ** | ||||||||
| hg38:Y:11033893-T-TTCCGC | ** | ||||||||
| hg38:Y:11033906-C-T | ** | ||||||||
| hg38:Y:10658244-C-A | ** | ||||||||
| hg19:Y:26392993-A-ACT hg38:Y:24246846-A-ACT | P1_Y1 | ** | |||||||
| hg19:Y:13465590-C-A hg38:Y:11309914-C-A | ** | ||||||||
| hg19:Y:14422791-C-A hg38:Y:12302066-C-A | ** | ||||||||
| hg19:Y:14387684-C-A hg38:Y:12266980-C-A | ** | ||||||||
| hg38:Y:12379429-C-A | ** | ||||||||
| hg19:Y:17581716-C-A hg38:Y:15469836-C-A | ** | ||||||||
| hg19:Y:19216416-C-A hg38:Y:17104536-C-A | ** | ||||||||
| hg19:Y:9873723-G-T hg38:Y:10036114-G-T | ** | ||||||||
| hg19:Y:3344021-C-A hg38:Y:3475980-C-A | ** | ||||||||
| hg19:Y:9596571-C-CT hg38:Y:9758962-C-CT | IR3_Prx | 8×T | ** | ||||||
| hg19:Y:28515510-GA-G hg38:Y:26369363-GA-G | 10×A | ** | |||||||
| hg19:Y:13857282-C-G hg38:Y:11736576-C-G | DYZ17 | ** | |||||||
| hg19:Y:28700544-C-A hg38:Y:26554397-C-A | ** | ||||||||
| hg38:Y:10993011-T-C | ** | ||||||||
| hg19:Y:14423818-C-A hg38:Y:12303093-C-A | ** | ||||||||
| hg19:Y:7108587-A-G hg38:Y:7240546-A-G | ** | ||||||||
| hg19:Y:21476440-C-A hg38:Y:19314554-C-A | ** | ||||||||
| hg19:Y:6459721-C-A hg38:Y:6591680-C-A | ** | ||||||||
| hg19:Y:14562372-C-A hg38:Y:12450572-C-A | ** | ||||||||
| hg19:Y:21700613-G-GA hg38:Y:19538727-G-GA | ** | ||||||||
| hg19:Y:16607866-C-A hg38:Y:14495986-C-A | ** | ||||||||
| hg38:Y:11643723-T-CAACTC | DYZ17 | ** | |||||||
| hg19:Y:13805202-G-A hg38:Y:11684496-G-A | DYZ17 | ** | |||||||
| hg38:Y:10993018-G-A | ** | ||||||||
| hg38:Y:10993023-C-A | ** | ||||||||
| hg19:Y:7821202-C-A hg38:Y:7953161-C-A | ** | ||||||||
| hg19:Y:14624301-G-T hg38:Y:12512501-G-T | ** | ||||||||
| hg19:Y:4805296-C-A hg38:Y:4937255-C-A | ** | ||||||||
| hg19:Y:16071730-ATTTTT-A hg38:Y:13959850-ATTTTT-A | 17×T | ** | |||||||
| hg19:Y:14021408-C-A hg38:Y:11900702-C-A | ** | ||||||||
| hg19:Y:16445881-C-A hg38:Y:14334001-C-A | ** | ||||||||
| hg19:Y:6366465-C-A hg38:Y:6498424-C-A | ** | ||||||||
| hg19:Y:8408468-C-A hg38:Y:8540427-C-A | ** | ||||||||
| hg19:Y:14605729-C-A hg38:Y:12493931-C-A | ** | ||||||||
| hg19:Y:17515267-C-A hg38:Y:15403387-C-A | ** | ||||||||
| hg19:Y:15536217-T-C hg38:Y:13424337-T-C | ** | ||||||||
| hg19:Y:15536218-G-A hg38:Y:13424338-G-A | ** | ||||||||
| hg19:Y:15536209-C-T hg38:Y:13424329-C-T | ** | ||||||||
| hg19:Y:18628053-C-A hg38:Y:16516173-C-A | ** | ||||||||
| hg19:Y:28765381-C-A hg38:Y:26619234-C-A | ** | ||||||||
| hg19:Y:14911076-C-A hg38:Y:12799143-C-A | ** | ||||||||
| hg19:Y:27507481-G-T hg38:Y:25361334-G-T | P1_Y2 | ** | |||||||
| hg19:Y:17580852-C-A hg38:Y:15468972-C-A | ** | ||||||||
| hg19:Y:19510253-C-A hg38:Y:17398373-C-A | ** | ||||||||
| hg19:Y:17103376-G-T hg38:Y:14991496-G-T | Y98190 | ** | |||||||
| hg19:Y:16048197-C-A hg38:Y:13936317-C-A | ** | ||||||||
| hg19:Y:14586250-C-A hg38:Y:12474450-C-A | ** | ||||||||
| hg19:Y:22132472-C-A hg38:Y:19970586-C-A | ** | ||||||||
| hg19:Y:13207929-C-A hg38:Y:11052253-C-A | ** | ||||||||
| hg19:Y:14359791-C-A hg38:Y:12239086-C-A | ** | ||||||||
| hg19:Y:16706924-C-A hg38:Y:14595044-C-A | ** | ||||||||
| hg19:Y:4065029-C-A hg38:Y:4196988-C-A | ** | ||||||||
| hg19:Y:5185385-C-A hg38:Y:5317344-C-A | ** | ||||||||
| hg19:Y:7142041-G-A hg38:Y:7274000-G-A | ** | ||||||||
| hg19:Y:5817921-A-G hg38:Y:5949880-A-G | ** | ||||||||
| hg19:Y:27861873-A-C hg38:Y:25715726-A-C | P1_Y2 | ** | |||||||
| hg19:Y:18728835-C-A hg38:Y:16616955-C-A | ** | ||||||||
| hg19:Y:13254593-A-C hg38:Y:11098917-A-C | ** | ||||||||
| hg19:Y:28754507-G-A hg38:Y:26608360-G-A | ** | ||||||||
| hg19:Y:18948209-C-A hg38:Y:16836329-C-A | ** | ||||||||
| hg19:Y:5863807-C-A hg38:Y:5995766-C-A | ** | ||||||||
| hg19:Y:14558595-C-A hg38:Y:12446796-C-A | ** | ||||||||
| hg19:Y:15785981-C-A hg38:Y:13674101-C-A | ** | ||||||||
| hg19:Y:16522943-C-A hg38:Y:14411063-C-A | ** | ||||||||
| hg19:Y:9927639-T-G hg38:Y:10090030-T-G | ** | ||||||||
| hg38:Y:10653176-C-A | ** | ||||||||
| hg19:Y:8730975-C-A hg38:Y:8862934-C-A | ** | ||||||||
| hg19:Y:17889809-C-A hg38:Y:15777929-C-A | ** | ||||||||
| hg19:Y:7208554-C-A hg38:Y:7340513-C-A | ** | ||||||||
| hg19:Y:5535082-C-A hg38:Y:5667041-C-A | ** | ||||||||
| hg19:Y:2649768-A-C hg38:Y:2781727-A-C | ** | ||||||||
| hg19:Y:2666592-G-A hg38:Y:2798551-G-A | FT377020 | ** | |||||||
| hg19:Y:3045868-T-C hg38:Y:3177827-T-C | ** | ||||||||
| hg19:Y:3229645-C-A hg38:Y:3361604-C-A | ** | ||||||||
| hg19:Y:3367159-C-A hg38:Y:3499118-C-A | ** | ||||||||
| hg19:Y:3374042-T-C hg38:Y:3506001-T-C | ** | ||||||||
| hg19:Y:3518294-A-G hg38:Y:3650253-A-G | ** | ||||||||
| hg19:Y:3641243-G-T hg38:Y:3773202-G-T | ** | ||||||||
| hg19:Y:3834625-T-C hg38:Y:3966584-T-C | ** | ||||||||
| hg19:Y:3990475-G-A hg38:Y:4122434-G-A | ** | ||||||||
| hg19:Y:4103065-C-T hg38:Y:4235024-C-T | ** | ||||||||
| hg19:Y:4261700-C-A hg38:Y:4393659-C-A | ** | ||||||||
| hg19:Y:4261733-G-A hg38:Y:4393692-G-A | ** | ||||||||
| hg19:Y:4701305-A-C hg38:Y:4833264-A-C | ** | ||||||||
| hg19:Y:4755985-C-G hg38:Y:4887944-C-G | ** | ||||||||
| hg19:Y:4779992-G-A hg38:Y:4911951-G-A | ** | ||||||||
| hg19:Y:4889906-C-A hg38:Y:5021865-C-A | ** | ||||||||
| hg19:Y:4976850-T-C hg38:Y:5108809-T-C | ** | ||||||||
| hg19:Y:5042429-G-T hg38:Y:5174388-G-T | ** | ||||||||
| hg19:Y:5042450-T-A hg38:Y:5174409-T-A | ** | ||||||||
| hg19:Y:5097679-G-T hg38:Y:5229638-G-T | ** | ||||||||
| hg19:Y:5212714-A-ATTT hg38:Y:5344673-A-ATTT | 12×T | ** | |||||||
| hg19:Y:5216647-C-A hg38:Y:5348606-C-A | ** | ||||||||
| hg19:Y:5219695-C-A hg38:Y:5351654-C-A | ** | ||||||||
| hg19:Y:5316883-C-T hg38:Y:5448842-C-T | ** | ||||||||
| hg19:Y:5445153-C-A hg38:Y:5577112-C-A | ** | ||||||||
| hg19:Y:5523096-T-A hg38:Y:5655055-T-A | ** | ||||||||
| hg19:Y:5530919-C-A hg38:Y:5662878-C-A | ** | ||||||||
| hg19:Y:5572356-C-A hg38:Y:5704315-C-A | ** | ||||||||
| hg19:Y:5687516-T-A hg38:Y:5819475-T-A | ** | ||||||||
| hg19:Y:5746101-G-T hg38:Y:5878060-G-T | ** | ||||||||
| hg19:Y:5852423-C-A hg38:Y:5984382-C-A | ** | ||||||||
| hg19:Y:5924350-T-C hg38:Y:6056309-T-C | ** | ||||||||
| hg19:Y:6356213-A-C hg38:Y:6488172-A-C | ** | ||||||||
| hg19:Y:6366317-T-C hg38:Y:6498276-T-C | ** | ||||||||
| hg19:Y:6516311-T-A hg38:Y:6648270-T-A | ** | ||||||||
| hg19:Y:6619575-T-C hg38:Y:6751534-T-C | ** | ||||||||
| hg19:Y:6690423-T-C hg38:Y:6822382-T-C | ** | ||||||||
| hg19:Y:6795307-G-A hg38:Y:6927266-G-A | ** | ||||||||
| hg19:Y:6977460-G-A hg38:Y:7109419-G-A | ** | ||||||||
| hg19:Y:7029643-T-A hg38:Y:7161602-T-A | ** | ||||||||
| hg19:Y:7131881-C-T hg38:Y:7263840-C-T | ** | ||||||||
| hg19:Y:7136987-C-T hg38:Y:7268946-C-T | ** | ||||||||
| hg19:Y:7138332-G-A hg38:Y:7270291-G-A | ** | ||||||||
| hg19:Y:7172498-TG-T hg38:Y:7304457-TG-T | ** | ||||||||
| hg19:Y:7294617-GAGATA-G hg38:Y:7426576-GAGATA-G | ** | ||||||||
| hg19:Y:7340317-C-A hg38:Y:7472276-C-A | ** | ||||||||
| hg19:Y:7360767-A-T hg38:Y:7492726-A-T | ** | ||||||||
| hg19:Y:7390351-C-A hg38:Y:7522310-C-A | ** | ||||||||
| hg19:Y:7422315-G-C hg38:Y:7554274-G-C | ** | ||||||||
| hg19:Y:7562220-C-A hg38:Y:7694179-C-A | ** | ||||||||
| hg19:Y:7758252-C-A hg38:Y:7890211-C-A | ** | ||||||||
| hg19:Y:7860317-C-A hg38:Y:7992276-C-A | FGC68394 | ** | |||||||
| hg19:Y:8073462-A-T hg38:Y:8205421-A-T | ** | ||||||||
| hg19:Y:8075162-C-A hg38:Y:8207121-C-A | ** | ||||||||
| hg19:Y:8556335-C-T hg38:Y:8688294-C-T | ** | ||||||||
| hg19:Y:8556347-C-CT hg38:Y:8688306-C-CT | ** | ||||||||
| hg19:Y:8556359-C-T hg38:Y:8688318-C-T | ** | ||||||||
| hg19:Y:8556366-G-A hg38:Y:8688325-G-A | ** | ||||||||
| hg19:Y:8735560-G-A hg38:Y:8867519-G-A | ** | ||||||||
| hg38:Y:9125503-G-C | ** | ||||||||
| hg19:Y:9077010-C-G hg38:Y:9239401-C-G | ** | ||||||||
| hg19:Y:9564511-G-GTT hg38:Y:9726902-G-GTT | IR3_Prx | ** | |||||||
| hg19:Y:9978455-G-A hg38:Y:10140846-G-A | ** | ||||||||
| hg19:Y:9993293-T-C hg38:Y:10155684-T-C | ** | ||||||||
| hg19:Y:10033358-C-A hg38:Y:10195749-C-A | ** | ||||||||
| hg38:Y:10653185-A-C | ** | ||||||||
| hg38:Y:10654399-T-A | ** | ||||||||
| hg38:Y:10656585-G-A | FT428289 | ** | |||||||
| hg38:Y:10678765-C-T | ** | ||||||||
| hg38:Y:10686636-C-A | ** | ||||||||
| hg38:Y:10772011-C-A | ** | ||||||||
| hg38:Y:10795372-T-G | ** | ||||||||
| hg38:Y:10801697-C-CACCCGGATTT | ** | ||||||||
| hg38:Y:10816579-C-A | ** | ||||||||
| hg38:Y:10878509-C-A | ** | ||||||||
| hg38:Y:10887993-A-G | ** | ||||||||
| hg38:Y:11000491-T-C | ** | ||||||||
| hg38:Y:11035633-C-A | ** | ||||||||
| hg38:Y:11035681-C-A | ** | ||||||||
| hg19:Y:13228796-A-G hg38:Y:11073120-A-G | ** | ||||||||
| hg19:Y:13234409-C-G hg38:Y:11078733-C-G | ** | ||||||||
| hg19:Y:13271767-T-A hg38:Y:11116091-T-A | ** | ||||||||
| hg19:Y:13298153-C-A hg38:Y:11142477-C-A | ** | ||||||||
| hg19:Y:13368001-A-T hg38:Y:11212325-A-T | ** | ||||||||
| hg19:Y:13442438-C-A hg38:Y:11286762-C-A | ** | ||||||||
| hg19:Y:13445484-A-G hg38:Y:11289808-A-G | ** | ||||||||
| hg19:Y:13477810-C-A hg38:Y:11322134-C-A | ** | ||||||||
| hg19:Y:13478113-C-T hg38:Y:11322437-C-T | ** | ||||||||
| hg19:Y:13523690-C-T hg38:Y:11368014-C-T | ** | ||||||||
| hg19:Y:13643144-C-A hg38:Y:11487468-C-A | ** | ||||||||
| hg38:Y:11643733-G-C | DYZ17 | ** | |||||||
| hg38:Y:11643753-G-TAACCC | DYZ17 | ** | |||||||
| hg38:Y:11656041-A-C | DYZ17 | ** | |||||||
| hg19:Y:13866098-T-C hg38:Y:11745392-T-C | DYZ17 | ** | |||||||
| hg19:Y:13884740-C-A hg38:Y:11764034-C-A | ** | ||||||||
| hg19:Y:13937035-C-A hg38:Y:11816329-C-A | ** | ||||||||
| hg19:Y:13952611-G-A hg38:Y:11831905-G-A | ** | ||||||||
| hg19:Y:13975923-G-A hg38:Y:11855217-G-A | FT143697 | ** | |||||||
| hg19:Y:14076973-T-A hg38:Y:11956267-T-A | ** | ||||||||
| hg19:Y:14191292-C-A hg38:Y:12070586-C-A | ** | ||||||||
| hg19:Y:14192926-C-A hg38:Y:12072220-C-A | ** | ||||||||
| hg19:Y:14273420-T-A hg38:Y:12152714-T-A | ** | ||||||||
| hg19:Y:14274033-C-T hg38:Y:12153327-C-T | ** | ||||||||
| hg19:Y:14311899-A-T hg38:Y:12191193-A-T | ** | ||||||||
| hg19:Y:14356922-C-A hg38:Y:12236217-C-A | ** | ||||||||
| hg19:Y:14401997-A-G hg38:Y:12281294-A-G | ** | ||||||||
| hg19:Y:14432310-C-A hg38:Y:12311583-C-A | ** | ||||||||
| hg19:Y:14462663-A-G hg38:Y:12341936-A-G | ** | ||||||||
| hg19:Y:14463369-C-A hg38:Y:12342642-C-A | ** | ||||||||
| hg19:Y:14468218-A-G hg38:Y:12347487-A-G | ** | ||||||||
| hg19:Y:14500192-A-T hg38:Y:12388397-A-T | ** | ||||||||
| hg19:Y:14563982-A-G hg38:Y:12452182-A-G | ** | ||||||||
| hg19:Y:14701009-T-C hg38:Y:12589075-T-C | ** | ||||||||
| hg19:Y:14712722-C-G hg38:Y:12600789-C-G | ** | ||||||||
| hg19:Y:14949272-AT-A hg38:Y:12837346-AT-A | ** | ||||||||
| hg19:Y:15111424-T-C hg38:Y:12999511-T-C | ** | ||||||||
| hg19:Y:15170764-C-A hg38:Y:13058850-C-A | ** | ||||||||
| hg19:Y:15346939-C-A hg38:Y:13235058-C-A | ** | ||||||||
| hg19:Y:15368893-C-A hg38:Y:13257013-C-A | ** | ||||||||
| hg19:Y:15397893-A-G hg38:Y:13286013-A-G | ** | ||||||||
| hg19:Y:15424656-T-G hg38:Y:13312776-T-G | ** | ||||||||
| hg19:Y:15536194-A-G hg38:Y:13424314-A-G | ** | ||||||||
| hg19:Y:15536199-T-C hg38:Y:13424319-T-C | ** | ||||||||
| hg19:Y:15536202-C-T hg38:Y:13424322-C-T | ** | ||||||||
| hg19:Y:15536210-CA-G hg38:Y:13424330-CA-G | ** | ||||||||
| hg19:Y:15619382-T-A hg38:Y:13507502-T-A | ** | ||||||||
| hg19:Y:15619560-C-A hg38:Y:13507680-C-A | ** | ||||||||
| hg19:Y:15648795-C-A hg38:Y:13536915-C-A | ** | ||||||||
| hg19:Y:15788145-A-C hg38:Y:13676265-A-C | ** | ||||||||
| hg19:Y:15793067-C-A hg38:Y:13681187-C-A | ** | ||||||||
| hg19:Y:15823907-T-A hg38:Y:13712027-T-A | ** | ||||||||
| hg19:Y:15842773-G-A hg38:Y:13730893-G-A | ** | ||||||||
| hg19:Y:16016234-C-A hg38:Y:13904354-C-A | ** | ||||||||
| hg19:Y:16018318-C-A hg38:Y:13906438-C-A | 8×A | ** | |||||||
| hg19:Y:16028376-G-A hg38:Y:13916496-G-A | ** | ||||||||
| hg19:Y:16028918-A-G hg38:Y:13917038-A-G | BY105480 | ** | |||||||
| hg19:Y:16047106-T-C hg38:Y:13935226-T-C | ** | ||||||||
| hg19:Y:16060541-A-G hg38:Y:13948661-A-G | ** | ||||||||
| hg19:Y:16316879-G-A hg38:Y:14204999-G-A | ** | ||||||||
| hg19:Y:16421086-C-A hg38:Y:14309206-C-A | ** | ||||||||
| hg19:Y:16458346-C-A hg38:Y:14346466-C-A | ** | ||||||||
| hg19:Y:16640232-A-T hg38:Y:14528352-A-T | ** | ||||||||
| hg19:Y:16847673-C-A hg38:Y:14735793-C-A | ** | ||||||||
| hg19:Y:16881664-A-C hg38:Y:14769784-A-C | ** | ||||||||
| hg19:Y:16929782-A-G hg38:Y:14817902-A-G | ** | ||||||||
| hg19:Y:17030689-A-G hg38:Y:14918809-A-G | ** | ||||||||
| hg19:Y:17089151-T-C hg38:Y:14977271-T-C | ** | ||||||||
| hg19:Y:17159710-C-T hg38:Y:15047830-C-T | ** | ||||||||
| hg19:Y:17175557-C-A hg38:Y:15063677-C-A | ** | ||||||||
| hg19:Y:17297084-T-A hg38:Y:15185204-T-A | ** | ||||||||
| hg19:Y:17479210-A-G hg38:Y:15367330-A-G | ** | ||||||||
| hg19:Y:17601197-A-G hg38:Y:15489317-A-G | ** | ||||||||
| hg19:Y:17860695-C-T hg38:Y:15748815-C-T | ** | ||||||||
| hg19:Y:18119495-C-A hg38:Y:16007615-C-A | ** | ||||||||
| hg19:Y:18153503-G-T hg38:Y:16041623-G-T | ** | ||||||||
| hg19:Y:18226525-C-A hg38:Y:16114645-C-A | ** | ||||||||
| hg19:Y:18491696-C-A hg38:Y:16379816-C-A | P6_Dst | ** | |||||||
| hg19:Y:18531191-T-A hg38:Y:16419311-T-A | P6_Dst | ** | |||||||
| hg19:Y:18701731-C-A hg38:Y:16589851-C-A | ** | ||||||||
| hg19:Y:19053482-C-A hg38:Y:16941602-C-A | ** | ||||||||
| hg19:Y:19055312-T-C hg38:Y:16943432-T-C | ** | ||||||||
| hg19:Y:19085217-G-A hg38:Y:16973337-G-A | ** | ||||||||
| hg19:Y:19122150-A-T hg38:Y:17010270-A-T | ** | ||||||||
| hg19:Y:19301542-C-A hg38:Y:17189662-C-A | ** | ||||||||
| hg19:Y:20377100-G-C hg38:Y:18215214-G-C | P5_Dst | ** | |||||||
| hg19:Y:20463423-A-AACTT hg38:Y:18301537-A-AACTT | P5_Dst | 9×ATTT | ** | ||||||
| hg19:Y:20685073-G-A hg38:Y:18523187-G-A | P4_Prx | ** | |||||||
| hg19:Y:20989123-A-AC hg38:Y:18827237-A-AC | P4_Dst | ** | |||||||
| hg19:Y:20989134-C-CCACACATAT hg38:Y:18827248-C-CCACACATAT | P4_Dst | ** | |||||||
| hg19:Y:20989141-A-AC hg38:Y:18827255-A-AC | P4_Dst | ** | |||||||
| hg19:Y:21182397-C-CTT hg38:Y:19020511-C-CTT | 20×T | ** | |||||||
| hg19:Y:21283394-G-A hg38:Y:19121508-G-A | ** | ||||||||
| hg19:Y:21588268-C-A hg38:Y:19426382-C-A | ** | ||||||||
| hg19:Y:21713475-G-T hg38:Y:19551589-G-T | ** | ||||||||
| hg19:Y:22135635-A-G hg38:Y:19973749-A-G | ** | ||||||||
| hg19:Y:22147209-A-G hg38:Y:19985323-A-G | ** | ||||||||
| hg19:Y:22594539-A-G hg38:Y:20432653-A-G | ** | ||||||||
| hg19:Y:22619496-C-A hg38:Y:20457610-C-A | ** | ||||||||
| hg19:Y:22808757-G-C hg38:Y:20646871-G-C | ** | ||||||||
| hg19:Y:22837521-G-T hg38:Y:20675635-G-T | ** | ||||||||
| hg19:Y:22837541-G-T hg38:Y:20675655-G-T | ** | ||||||||
| hg19:Y:22855395-T-A hg38:Y:20693509-T-A | ** | ||||||||
| hg19:Y:22965387-C-A hg38:Y:20803501-C-A | ** | ||||||||
| hg19:Y:23013920-T-C hg38:Y:20852034-T-C | ** | ||||||||
| hg19:Y:23050390-A-G hg38:Y:20888504-A-G | ** | ||||||||
| hg19:Y:23142338-A-G hg38:Y:20980452-A-G | ** | ||||||||
| hg19:Y:23202790-C-A hg38:Y:21040904-C-A | ** | ||||||||
| hg19:Y:23205484-C-A hg38:Y:21043598-C-A | ** | ||||||||
| hg19:Y:23355485-CA-C hg38:Y:21193599-CA-C | ** | ||||||||
| hg19:Y:23368816-T-C hg38:Y:21206930-T-C | ** | ||||||||
| hg19:Y:23373060-A-G hg38:Y:21211174-A-G | ** | ||||||||
| hg38:Y:21779409-ATGAAAG-A | ** | ||||||||
| hg38:Y:21779417-CAATTGAA-C | ** | ||||||||
| hg19:Y:24402386-A-G hg38:Y:22256239-A-G | ** | ||||||||
| hg19:Y:25930284-A-AT hg38:Y:23784137-A-AT | P1_Y1 | ** | |||||||
| hg19:Y:25987981-G-A hg38:Y:23841834-G-A | P1_Y1 | ** | |||||||
| hg19:Y:27127707-T-C hg38:Y:24981560-T-C | P1_g3 | ** | |||||||
| hg19:Y:27127719-T-C hg38:Y:24981572-T-C | P1_g3 | ** | |||||||
| hg19:Y:27127725-T-C hg38:Y:24981578-T-C | P1_g3 | ** | |||||||
| hg19:Y:27693107-C-A hg38:Y:25546960-C-A | P1_Y2 | ** | |||||||
| hg19:Y:28062634-C-G hg38:Y:25916487-C-G | P1_Y2 | ** | |||||||
| hg19:Y:28429312-C-T hg38:Y:26283165-C-T | P1_gr2 | ** | |||||||
| hg19:Y:28496248-C-G hg38:Y:26350101-C-G | ** | ||||||||
| hg19:Y:28581155-G-A hg38:Y:26435008-G-A | ** | ||||||||
| hg19:Y:28645317-T-C hg38:Y:26499170-T-C | ** | ||||||||
| hg19:Y:28668112-C-T hg38:Y:26521965-C-T | ** | ||||||||
| hg38:Y:56828553-G-T | ** | ||||||||
| hg38:Y:56835441-C-A | ** | ||||||||
| hg19:Y:23007487-G-T hg38:Y:20845601-G-T | *** | ||||||||
| hg19:Y:13709671-A-T hg38:Y:11553995-A-T | DYZ17 | *** | |||||||
| hg19:Y:19936779-G-A hg38:Y:17824899-G-A | P5_Prx | *** | |||||||
| hg19:Y:22223403-A-T hg38:Y:20061517-A-T | DYZ19 | *** | |||||||
| hg19:Y:22306070-A-T hg38:Y:20144184-A-T | DYZ19 | *** | |||||||
| hg19:Y:22339216-T-A hg38:Y:20177330-T-A | DYZ19 | *** | |||||||
| hg19:Y:22358525-C-T hg38:Y:20196639-C-T | DYZ19 | *** | |||||||
| hg19:Y:22441568-T-A hg38:Y:20279682-T-A | DYZ19 | *** | |||||||
| hg19:Y:25029011-C-T hg38:Y:22882864-C-T | g1 | *** | |||||||
| hg19:Y:25168679-G-A hg38:Y:23022532-G-A | g1 | *** | |||||||
| hg19:Y:25191132-C-G hg38:Y:23044985-C-G | g1 | *** | |||||||
| hg19:Y:25350592-T-A hg38:Y:23204445-T-A | P2_r1 | *** | |||||||
| hg38:Y:56834508-C-A,T | *** | ||||||||
| hg38:Y:56835549-G-A | *** | ||||||||
| hg38:Y:56826968-T-TTGGCATTCCA | *** | ||||||||
| hg19:Y:13448198-TCCATT-T,TCCATTACATC hg38:Y:11292522-TCCATT-T,TCCATTACATC | *** | ||||||||
| hg19:Y:7181821-C-A hg38:Y:7313780-C-A | *** | ||||||||
| hg38:Y:11001457-C-A | *** | ||||||||
| hg38:Y:56834454-A-ACTCCA,ACTCCG | *** | ||||||||
| hg19:Y:17646697-C-A hg38:Y:15534817-C-A | *** | ||||||||
| hg19:Y:4100939-C-T hg38:Y:4232898-C-T | FGC68757 | *** | |||||||
| hg19:Y:7255590-C-A hg38:Y:7387549-C-A | *** | ||||||||
| hg19:Y:9900414-T-A hg38:Y:10062805-T-A | *** | ||||||||
| hg38:Y:10658381-T-C | *** | ||||||||
| hg38:Y:10776055-C-CCCTCG | *** | ||||||||
| hg19:Y:13315956-C-A hg38:Y:11160280-C-A | FT442808 | *** | |||||||
| hg19:Y:13928428-C-G hg38:Y:11807722-C-G | *** | ||||||||
| hg19:Y:14041825-C-A hg38:Y:11921119-C-A | *** | ||||||||
| hg19:Y:14626239-ATAT-A hg38:Y:12514307-ATAT-A | *** | ||||||||
| hg19:Y:15114060-T-C hg38:Y:13002147-T-C | *** | ||||||||
| hg19:Y:16749763-TG-T hg38:Y:14637883-TG-T | *** | ||||||||
| hg19:Y:17175221-A-G hg38:Y:15063341-A-G | *** | ||||||||
| hg19:Y:17275560-C-A hg38:Y:15163680-C-A | *** | ||||||||
| hg19:Y:17882940-C-A hg38:Y:15771060-C-A | *** | ||||||||
| hg19:Y:22827483-A-G hg38:Y:20665597-A-G | *** | ||||||||
| hg19:Y:22849491-CTTTTTT-C,CTTTTTTTT hg38:Y:20687605-CTTTTTT-C,CTTTTTTTT | 20×T | *** | |||||||
| hg19:Y:22855115-G-T hg38:Y:20693229-G-T | *** | ||||||||
| hg19:Y:23272273-A-G hg38:Y:21110387-A-G | *** | ||||||||
| hg19:Y:24221402-C-A hg38:Y:22075255-C-A | P3_b1 | *** | |||||||
| hg38:Y:56826961-C-CGATTC,G | *** | ||||||||
| hg38:Y:56829794-C-A | *** | ||||||||
| hg38:Y:56830938-T-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 378155 | 10780111 | 7813398 | 7899009 |
| Kit: 378155 | 9694927 | 7935581 | 7862670 |
| Kit: 378155 | 14932779 | 9359990 | 8271127 |
| Used in age calculations | 14932779 | 9359990 | 8271127 |
| Counts of SNPs | 19 | 17 |
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