Byrne
FTDNA: 30991, BigY2: 30991Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 30991 | BigY2 30991 |
---|---|---|---|---|---|---|---|---|---|
6308355-G-GA | 6440314-G-GA | IR3_Dst | *** | A* | |||||
8154059-C-A | 8286018-C-A | BY11182 | Y | Y | + | ** | |||
16248224-C-A | 14136344-C-A | BY11196 | Y | Y | + | + | |||
16802683-C-T | 14690803-C-T | BY54860 | Y | Y | + | + | |||
18406680-T-C | 16294800-T-C | BY121778 | P6_Gap | + | + | ||||
18689391-A-G | 16577511-A-G | BY123135 | Y | Y | + | + | |||
2746119-CAG-C | 2878078-CAG-C | * | |||||||
58890979-A-T | 56699892-T-A | ** | |||||||
26114642-GAC-G | 23968495-GAC-G | P1_Y1 | 9×AC | ** | |||||
20340162-C-T | 18178276-C-T | P5_Dst | ** | ||||||
22662289-G-T | 20500403-G-T | M6523 | 13×T | ** | |||||
16432561-C-A | 14320681-C-A | ** | |||||||
5962150-G-A | 6094109-G-A | ** | |||||||
6001865-C-T | 6133824-C-T | ** | |||||||
13460961-T-A | 11305285-T-A | ** | |||||||
18688520-AC-A | 16576640-AC-A | ** | |||||||
19537918-AG-A | 17426038-AG-A | ** | |||||||
3926582-C-A | 4058541-C-A | ** | |||||||
18794976-G-A | 16683096-G-A | CTS9275 Z2368 PF4820 AM01331 | ** | ** | |||||
13460960-G-T | 11305284-G-T | ** | |||||||
16739561-C-A | 14627681-C-A | ** | |||||||
17385378-C-A | 15273498-C-A | ** | |||||||
9735636-C-T | 9898027-C-T | IR3_Prx | ** | ||||||
23138698-G-T | 20976812-G-T | ** | ** | ||||||
16545410-T-A | 14433530-T-A | ** | |||||||
26204668-G-A | 24058521-G-A | BY226719 | P1_Y1 | ** | |||||
22167224-CAA-C | 20005338-CAA-C | 29×A | ** | ||||||
19449255-C-A | 17337375-C-A | ** | |||||||
11016401-C-T | ** | ||||||||
11016401-CCACTG-C | ** | ||||||||
56830205-T-TTCCACTCCACTCCAC | ** | ||||||||
6992553-CTTTT-C | 7124512-CTTTT-C | 17×T | ** | ||||||
24582353-T-TC | 22436206-T-TC | P3_t2 | ** | ||||||
6775420-CAAA-C | 6907379-CAAA-C | 12×A | ** | ||||||
21751033-G-T | ** | ||||||||
11031630-C-A | ** | ||||||||
18147559-A-C | 16035679-A-C | ** | |||||||
28631556-C-A | 26485409-C-A | ** | |||||||
6523677-G-A | 6655636-G-A | FT366837 | ** | ||||||
10958566-C-T | ** | ||||||||
56699848-A-G | ** | ||||||||
56699861-G-A | ** | ||||||||
10748211-A-G | ** | ||||||||
10748212-T-A | ** | ||||||||
15177932-C-A | 13066018-C-A | FT367934 | ** | ||||||
15941461-C-A | 13829581-C-A | ** | |||||||
7186169-C-A | 7318128-C-A | ** | |||||||
24475328-AT-A | 22329181-AT-A | 10×T | ** | ||||||
16842709-C-A | 14730829-C-A | ** | |||||||
10954051-G-T | ** | ||||||||
19071814-C-A | 16959934-C-A | ** | |||||||
24266708-T-TC | 22120561-T-TC | P3_b1 | ** | ||||||
4770540-C-A | 4902499-C-A | ** | |||||||
27466689-G-T | 25320542-G-T | P1_Y2 | ** | ||||||
16147491-AGAG-A | 14035611-AGAG-A | P8_Dst | ** | ||||||
9082198-GC-G | 9244589-GC-G | 8×C | ** | ||||||
10987783-C-G | ** | ||||||||
10962756-CCCACT-C | ** | ||||||||
10752325-G-A | ** | ||||||||
24403392-C-A | 22257245-C-A | ** | |||||||
10954098-C-T | ** | ||||||||
14562871-C-A | 12451071-C-A | ** | |||||||
11018287-C-G | ** | ||||||||
11018288-A-C | ** | ||||||||
10653163-C-T | ** | ||||||||
10653175-T-TTGA | ** | ||||||||
10653178-A-G | ** | ||||||||
13384815-C-A | 11229139-C-A | ** | |||||||
10989482-T-C | ** | ||||||||
10989484-C-CACTA | ** | ||||||||
10989491-C-T | ** | ||||||||
10954036-T-C | ** | ||||||||
13485592-A-T | 11329916-A-T | ** | |||||||
10744309-T-C | ** | ||||||||
10744312-C-A | ** | ||||||||
28542477-C-A | 26396330-C-A | ** | |||||||
28741127-C-A | 26594980-C-A | ** | |||||||
13226800-C-A | 11071124-C-A | ** | |||||||
19075424-C-A | 16963544-C-A | ** | |||||||
28771607-C-A | 26625460-C-A | ** | |||||||
10954105-C-A | ** | ||||||||
10821851-C-A | ** | ||||||||
11025036-T-G | ** | ||||||||
11025039-A-G | ** | ||||||||
16931684-G-T | 14819804-G-T | ** | |||||||
10657425-CA-C | ** | ||||||||
5316951-C-A | 5448910-C-A | ** | |||||||
11647924-G-T | ** | ||||||||
10989508-C-T | ** | ||||||||
11646483-C-A | ** | ||||||||
10748177-T-G | ** | ||||||||
10748216-G-C | ** | ||||||||
4460815-C-A | 4592774-C-A | ** | |||||||
4062609-C-A | 4194568-C-A | ** | |||||||
9075216-A-G | 9237607-A-G | ** | |||||||
10986411-C-T | ** | ||||||||
10986415-A-G | ** | ||||||||
10986419-C-T | ** | ||||||||
10986426-C-T | ** | ||||||||
10986438-C-G | ** | ||||||||
14021229-C-A | 11900523-C-A | ** | |||||||
16981392-C-A | 14869512-C-A | ** | |||||||
10004883-GTA-G | 10167274-GTA-G | ** | |||||||
16692757-G-A | 14580877-G-A | 27×A | ** | ||||||
14986524-C-A | 12874592-C-A | ** | |||||||
10744286-C-A | ** | ||||||||
10744287-C-A | ** | ||||||||
15150917-C-A | 13039004-C-A | ** | |||||||
28656920-C-A | 26510773-C-A | ** | |||||||
13974746-G-T | 11854040-G-T | ** | |||||||
28532116-C-A | 26385969-C-A | ** | |||||||
4957903-G-T | 5089862-G-T | ** | |||||||
20326038-CA-T | 18164152-CA-T | P5_Dst | ** | ||||||
5687495-C-A | 5819454-C-A | ** | |||||||
10818998-C-A | ** | ||||||||
23825777-T-A | 21663891-T-A | ** | |||||||
18309163-T-C | 16197283-T-C | P6_Prx | ** | ||||||
7363314-CAA-C | 7495273-CAA-C | 10×A | ** | ||||||
7360838-C-A | 7492797-C-A | ** | |||||||
11008714-C-A | ** | ||||||||
21750974-G-T | ** | ||||||||
56699862-A-T | ** | ||||||||
9664331-G-T | 9826722-G-T | IR3_Prx | ** | ||||||
19318219-C-A | 17206339-C-A | ** | |||||||
18345943-A-AATAAATACATACATAC | 16234063-A-AATAAATACATACATAC | P6_Prx | 9×ATAC | ** | |||||
15081381-C-A | 12969471-C-A | ** | |||||||
26080940-A-C | 23934793-A-C | P1_Y1 | ** | ||||||
28731945-C-A | 26585798-C-A | ** | |||||||
5605959-C-A | 5737918-C-A | ** | |||||||
10757988-T-C | ** | ||||||||
9461073-C-A | 9623464-C-A | ** | |||||||
10906193-A-G | ** | ||||||||
10906195-C-T | ** | ||||||||
10906244-G-A | FT436132 | ** | |||||||
10892448-C-A | ** | ||||||||
17504826-C-A | 15392946-C-A | ** | |||||||
21422252-C-A | 19260366-C-A | ** | |||||||
8353237-C-A | 8485196-C-A | ** | |||||||
20770482-TC-T | 18608596-TC-T | P4_Prx | ** | ||||||
15918620-A-AT | 13806740-A-AT | 8×T | ** | ||||||
5242661-G-A | 5374620-G-A | ** | |||||||
16691424-C-A | 14579544-C-A | ** | |||||||
10992681-T-C | ** | ||||||||
15332220-C-A | 13220338-C-A | ** | |||||||
10799615-CA-C | ** | ||||||||
10799618-T-TG | ** | ||||||||
16541052-C-A | 14429172-C-A | ** | |||||||
7106318-C-A | 7238277-C-A | ** | |||||||
13334002-G-T | 11178326-G-T | ** | |||||||
10809320-C-T | ** | ||||||||
10809325-C-T | ** | ||||||||
10809336-T-TCCTCA | ** | ||||||||
26055571-C-A | 23909424-C-A | P1_Y1 | ** | ||||||
15127777-C-A | 13015864-C-A | ** | |||||||
10664827-T-C | ** | ||||||||
19677904-ACCC-A | 17566024-ACCC-A | P5_Prx | ** | ||||||
19936154-T-G | 17824274-T-G | P5_Prx | ** | ||||||
56858687-C-A | ** | ||||||||
17318206-C-A | 15206326-C-A | ** | |||||||
3389238-C-A | 3521197-C-A | ** | |||||||
22263942-C-A | 20102056-C-A | DYZ19 | ** | ||||||
28650087-C-A | 26503940-C-A | ** | |||||||
22816341-T-C | 20654455-T-C | ** | |||||||
26204647-C-T | 24058500-C-T | P1_Y1 | ** | ||||||
13719444-C-A | 11563768-C-A | ** | |||||||
17375242-G-T | 15263362-G-T | ** | |||||||
11011495-T-G | ** | ||||||||
11011496-T-A | ** | ||||||||
11011498-C-G | ** | ||||||||
14486082-C-A | 12365351-C-A | ** | |||||||
11018254-A-ACTCCT | ** | ||||||||
10947400-C-A | ** | ||||||||
2746040-C-A | 2877999-C-A | ** | |||||||
3334420-G-T | 3466379-G-T | ** | |||||||
8671526-C-A | 8803485-C-A | ** | |||||||
17992550-A-G | 15880670-A-G | P7_Prx | ** | ||||||
18631062-C-A | 16519182-C-A | ** | |||||||
14571214-C-A | 12459414-C-A | ** | |||||||
11018264-A-ATTCCT | ** | ||||||||
11018271-T-A | ** | ||||||||
22286715-T-C | 20124829-T-C | DYZ19 | ** | ||||||
10916302-G-T | ** | ||||||||
17217259-C-A | 15105379-C-A | ** | |||||||
56835842-C-T | ** | ||||||||
10821852-C-A | ** | ||||||||
7099843-C-A | 7231802-C-A | ** | |||||||
17115043-C-A | 15003163-C-A | ** | |||||||
10757495-C-A | ** | ||||||||
23120066-C-A | 20958180-C-A | ** | |||||||
17576232-C-A | 15464352-C-A | ** | |||||||
5894966-ATG-A | 6026925-ATG-A | ** | |||||||
21087151-C-A | 18925265-C-A | ** | |||||||
7709439-C-A | 7841398-C-A | ** | |||||||
6816663-C-A | 6948622-C-A | ** | |||||||
28660653-C-A | 26514506-C-A | ** | |||||||
10821822-CGTTTG-C | ** | ||||||||
8051853-C-A | 8183812-C-A | ** | |||||||
13921506-C-A | 11800800-C-A | ** | |||||||
6001853-T-A | 6133812-T-A | ** | |||||||
14610521-C-A | 12498723-C-A | ** | |||||||
13480456-G-A | 11324780-G-A | ** | |||||||
14316315-C-A | 12195609-C-A | ** | |||||||
14380134-C-A | 12259430-C-A | ** | |||||||
23144195-C-A | 20982309-C-A | ** | |||||||
10906224-G-C | ** | ||||||||
10906230-C-G | ** | ||||||||
10906259-T-G | ** | ||||||||
11034486-C-A | ** | ||||||||
24402114-C-A | 22255967-C-A | ** | |||||||
10921118-CTCCATTCCAT-C | ** | ||||||||
13880776-C-A | 11760070-C-A | ** | |||||||
14432192-C-A | 12311465-C-A | ** | |||||||
17876427-C-A | 15764547-C-A | ** | |||||||
5002046-A-AT | 5134005-A-AT | 9×T | ** | ||||||
13567213-G-A | 11411537-G-A | ** | |||||||
21139387-C-A | 18977501-C-A | ** | |||||||
4552705-G-T | 4684664-G-T | ** | |||||||
11656713-G-T | ** | ||||||||
28498098-A-G | 26351951-A-G | ** | |||||||
10906183-G-C | ** | ||||||||
14742285-G-T | 12630353-G-T | ** | |||||||
24512328-C-A | 22366181-C-A | ** | |||||||
5874200-C-A | 6006159-C-A | ** | |||||||
3047392-T-C | 3179351-T-C | ** | |||||||
28462288-G-T | 26316141-G-T | ** | |||||||
2861466-T-A | 2993425-T-A | ** | |||||||
21554103-C-A | 19392217-C-A | ** | |||||||
21476935-C-A | 19315049-C-A | ** | |||||||
18780445-C-A | 16668565-C-A | ** | |||||||
21267986-C-A | 19106100-C-A | ** | |||||||
7159157-C-A | 7291116-C-A | ** | |||||||
7311787-C-A | 7443746-C-A | ** | |||||||
17159511-C-A | 15047631-C-A | ** | |||||||
4213124-C-A | 4345083-C-A | ** | |||||||
21225046-C-A | 19063160-C-A | ** | |||||||
17860633-C-A | 15748753-C-A | ** | |||||||
13483786-C-A | 11328110-C-A | ** | |||||||
28781583-C-A | 26635436-C-A | ** | |||||||
14495787-G-T | 12383984-G-T | ** | |||||||
13199323-C-A | 11043647-C-A | ** | |||||||
23825221-G-T | 21663335-G-T | ** | |||||||
2738825-C-A | 2870784-C-A | ** | |||||||
2814922-G-A | 2946881-G-A | FT234917 | ** | ||||||
2928600-C-A | 3060559-C-A | ** | |||||||
2960470-G-T | 3092429-G-T | ** | |||||||
3017783-G-T | 3149742-G-T | ** | |||||||
3065542-G-A | 3197501-G-A | ** | |||||||
3084861-A-T | 3216820-A-T | ** | |||||||
3112386-C-A | 3244345-C-A | ** | |||||||
3116627-C-A | 3248586-C-A | ** | |||||||
3244957-G-A | 3376916-G-A | ** | |||||||
3268669-G-T | 3400628-G-T | ** | |||||||
3389351-C-A | 3521310-C-A | ** | |||||||
3463840-C-A | 3595799-C-A | ** | |||||||
3505433-C-A | 3637392-C-A | ** | |||||||
3528185-G-T | 3660144-G-T | ** | |||||||
3602812-C-A | 3734771-C-A | ** | |||||||
3615063-C-A | 3747022-C-A | ** | |||||||
3706567-C-A | 3838526-C-A | ** | |||||||
3706624-A-C | 3838583-A-C | ** | |||||||
3832133-T-A | 3964092-T-A | ** | |||||||
3852829-A-T | 3984788-A-T | ** | |||||||
3875876-A-G | 4007835-A-G | ** | |||||||
3890524-G-T | 4022483-G-T | ** | |||||||
3913516-C-A | 4045475-C-A | ** | |||||||
4029019-C-A | 4160978-C-A | ** | |||||||
4035338-A-T | 4167297-A-T | ** | |||||||
4130048-T-C | 4262007-T-C | ** | |||||||
4182209-G-T | 4314168-G-T | ** | |||||||
4186682-T-A | 4318641-T-A | ** | |||||||
4208150-C-A | 4340109-C-A | ** | |||||||
4334271-C-A | 4466230-C-A | ** | |||||||
4393537-C-A | 4525496-C-A | ** | |||||||
4461556-G-T | 4593515-G-T | ** | |||||||
4466044-C-A | 4598003-C-A | ** | |||||||
4508068-A-T | 4640027-A-T | ** | |||||||
4547208-CT-C | 4679167-CT-C | ** | |||||||
4584453-T-A | 4716412-T-A | ** | |||||||
4644613-T-C | 4776572-T-C | ** | |||||||
4671454-C-A | 4803413-C-A | ** | |||||||
4701350-TA-T | 4833309-TA-T | ** | |||||||
4770673-C-A | 4902632-C-A | ** | |||||||
4777074-G-T | 4909033-G-T | ** | |||||||
4879738-G-T | 5011697-G-T | ** | |||||||
4933729-G-T | 5065688-G-T | ** | |||||||
5112772-C-A | 5244731-C-A | ** | |||||||
5112795-C-A | 5244754-C-A | FT255867 | ** | ||||||
5200311-A-T | 5332270-A-T | ** | |||||||
5216499-C-A | 5348458-C-A | ** | |||||||
5221045-T-C | 5353004-T-C | ** | |||||||
5231607-T-A | 5363566-T-A | ** | |||||||
5277075-C-A | 5409034-C-A | ** | |||||||
5310012-T-C | 5441971-T-C | ** | |||||||
5335394-T-A | 5467353-T-A | ** | |||||||
5433843-C-A | 5565802-C-A | ** | |||||||
5606792-G-A | 5738751-G-A | ** | |||||||
5643449-T-TA | 5775408-T-TA | 12×A | ** | ||||||
5911992-C-A | 6043951-C-A | ** | |||||||
5957410-C-A | 6089369-C-A | ** | |||||||
6134752-T-A | 6266711-T-A | ** | |||||||
6490837-C-A | 6622796-C-A | ** | |||||||
6607218-A-T | 6739177-A-T | ** | |||||||
6772883-T-A | 6904842-T-A | ** | |||||||
6832275-G-T | 6964234-G-T | ** | |||||||
6978141-A-G | 7110100-A-G | ** | |||||||
6981167-C-A | 7113126-C-A | ** | |||||||
7009188-T-TC | 7141147-T-TC | ** | |||||||
7033563-C-A | 7165522-C-A | ** | |||||||
7141794-G-T | 7273753-G-T | ** | |||||||
7160464-C-A | 7292423-C-A | ** | |||||||
7167601-C-A | 7299560-C-A | ** | |||||||
7182902-C-A | 7314861-C-A | ** | |||||||
7214415-G-C | 7346374-G-C | ** | |||||||
7306766-C-G | 7438725-C-G | ** | |||||||
7307763-C-A | 7439722-C-A | ** | |||||||
7368941-A-G | 7500900-A-G | ** | |||||||
7390391-T-G | 7522350-T-G | ** | |||||||
7461324-C-T | 7593283-C-T | IR1_L | ** | ||||||
7514270-A-G | 7646229-A-G | FTA7265 | ** | ||||||
7534631-C-A | 7666590-C-A | ** | |||||||
7864196-G-T | 7996155-G-T | ** | |||||||
7864322-G-A | 7996281-G-A | ** | |||||||
7925167-C-G | 8057126-C-G | ** | |||||||
7996880-C-A | 8128839-C-A | ** | |||||||
8058550-A-G | 8190509-A-G | ** | |||||||
8153610-C-T | 8285569-C-T | ** | |||||||
8159088-C-A | 8291047-C-A | ** | |||||||
8398893-C-A | 8530852-C-A | ** | |||||||
8672970-T-C | 8804929-T-C | ** | |||||||
8741743-C-A | 8873702-C-A | ** | |||||||
8785537-TG-T | 8917496-TG-T | ** | |||||||
8786728-A-C | 8918687-A-C | ** | |||||||
8822427-CA-C | 8954386-CA-C | ** | |||||||
9411881-G-T | 9574272-G-T | ** | |||||||
9414442-G-T | 9576833-G-T | ** | |||||||
9437271-C-A | 9599662-C-A | ** | |||||||
9451281-G-T | 9613672-G-T | ** | |||||||
9513534-G-T | 9675925-G-T | ** | |||||||
9888611-G-T | 10051002-G-T | ** | |||||||
9908450-G-T | 10070841-G-T | ** | |||||||
9934708-T-C | 10097099-T-C | ** | |||||||
9934842-C-A | 10097233-C-A | ** | |||||||
9940028-C-A | 10102419-C-A | FT361936 | ** | ||||||
9978471-G-A | 10140862-G-A | ** | |||||||
10011705-T-C | 10174096-T-C | ** | |||||||
10069538-G-T | 10231929-G-T | ** | |||||||
10655838-T-C | ** | ||||||||
10669638-G-T | ** | ||||||||
10672672-G-T | ** | ||||||||
10687534-C-A | ** | ||||||||
10692015-C-A | ** | ||||||||
10753999-G-T | ** | ||||||||
10770606-T-C | ** | ||||||||
10770622-CCATT-C | ** | ||||||||
10787528-T-C | ** | ||||||||
10802271-C-T | ** | ||||||||
10811625-C-A | ** | ||||||||
10845491-G-T | ** | ||||||||
10866537-C-T | FT91911 | ** | |||||||
10873387-C-A | ** | ||||||||
10873427-C-A | ** | ||||||||
10892688-C-A | ** | ||||||||
10923829-G-T | ** | ||||||||
10925961-C-A | ** | ||||||||
10926070-C-A | ** | ||||||||
10931389-C-T | ** | ||||||||
10954060-T-C | ** | ||||||||
10954063-C-CTCTAA | ** | ||||||||
10954073-T-C | ** | ||||||||
10954080-C-A | ** | ||||||||
10954096-C-A | ** | ||||||||
10954109-TCCACA-T | ** | ||||||||
10954120-C-T | ** | ||||||||
10954142-A-G | ** | ||||||||
10954143-CTGTAT-C | ** | ||||||||
10978422-G-T | ** | ||||||||
10979036-G-T | ** | ||||||||
10983718-C-A | ** | ||||||||
11005266-G-A | ** | ||||||||
11027809-A-C | ** | ||||||||
13196133-C-A | 11040457-C-A | ** | |||||||
13226845-G-C | 11071169-G-C | ** | |||||||
13229846-T-C | 11074170-T-C | FT48481 | ** | ||||||
13233440-G-T | 11077764-G-T | ** | |||||||
13255210-C-A | 11099534-C-A | ** | |||||||
13259213-G-T | 11103537-G-T | ** | |||||||
13290445-G-T | 11134769-G-T | ** | |||||||
13344860-C-A | 11189184-C-A | ** | |||||||
13405056-A-C | 11249380-A-C | ** | |||||||
13454436-C-A | 11298760-C-A | ** | |||||||
13576162-T-C | 11420486-T-C | ** | |||||||
13593492-C-A | 11437816-C-A | ** | |||||||
13624193-C-A | 11468517-C-A | ** | |||||||
13652269-A-T | 11496593-A-T | ** | |||||||
11645667-C-A | ** | ||||||||
11646741-T-C | ** | ||||||||
11670367-G-T | ** | ||||||||
11670383-G-T | ** | ||||||||
11673587-G-T | ** | ||||||||
13805285-C-A | 11684579-C-A | ** | |||||||
13921472-C-G | 11800766-C-G | ** | |||||||
13931942-C-T | 11811236-C-T | ** | |||||||
13939637-C-A | 11818931-C-A | ** | |||||||
14020304-C-A | 11899598-C-A | ** | |||||||
14107626-C-A | 11986920-C-A | ** | |||||||
14130736-A-G | 12010030-A-G | ** | |||||||
14184297-C-A | 12063591-C-A | ** | |||||||
14228611-C-A | 12107905-C-A | ** | |||||||
14241810-T-C | 12121104-T-C | ** | |||||||
14250686-G-A | 12129980-G-A | ** | |||||||
14272388-A-G | 12151682-A-G | ** | |||||||
14281000-A-G | 12160294-A-G | ** | |||||||
14284962-C-A | 12164256-C-A | ** | |||||||
14431596-C-A | 12310869-C-A | ** | |||||||
14499652-C-G | 12387857-C-G | ** | |||||||
14518462-C-A | 12406663-C-A | ** | |||||||
14527073-C-A | 12415274-C-A | ** | |||||||
14567228-T-A | 12455428-T-A | ** | |||||||
14571227-T-A | 12459427-T-A | ** | |||||||
14585294-G-T | 12473494-G-T | ** | |||||||
14635534-G-A | 12523603-G-A | ** | |||||||
14686169-C-A | 12574235-C-A | ** | |||||||
14712356-A-G | 12600423-A-G | ** | |||||||
14722567-G-A | 12610635-G-A | ** | |||||||
14831833-C-A | 12719900-C-A | ** | |||||||
14859063-T-C | 12747129-T-C | ** | |||||||
14933644-C-A | 12821709-C-A | ** | |||||||
14986531-C-A | 12874599-C-A | ** | |||||||
15185360-A-C | 13073446-A-C | ** | |||||||
15300200-G-T | 13188299-G-T | ** | |||||||
15368746-C-T | 13256866-C-T | ** | |||||||
15503338-T-C | 13391458-T-C | ** | |||||||
15558136-C-A | 13446256-C-A | ** | |||||||
15684691-T-A | 13572811-T-A | ** | |||||||
15769163-C-A | 13657283-C-A | ** | |||||||
15787975-TA-T | 13676095-TA-T | ** | |||||||
15794258-G-A | 13682378-G-A | ** | |||||||
15842742-C-A | 13730862-C-A | ** | |||||||
15909354-A-C | 13797474-A-C | ** | |||||||
16009710-G-T | 13897830-G-T | ** | |||||||
16017617-C-A | 13905737-C-A | ** | |||||||
16022618-G-T | 13910738-G-T | ** | |||||||
16036342-C-A | 13924462-C-A | ** | |||||||
16046843-T-C | 13934963-T-C | ** | |||||||
16048329-C-A | 13936449-C-A | ** | |||||||
16181130-A-C | 14069250-A-C | ** | |||||||
16241609-T-C | 14129729-T-C | ** | |||||||
16267382-G-T | 14155502-G-T | ** | |||||||
16342160-G-A | 14230280-G-A | ** | |||||||
16345048-T-A | 14233168-T-A | ** | |||||||
16405353-C-A | 14293473-C-A | ** | |||||||
16412368-G-C | 14300488-G-C | ** | |||||||
16562931-C-A | 14451051-C-A | ** | |||||||
16624401-G-T | 14512521-G-T | ** | |||||||
16931681-A-G | 14819801-A-G | ** | |||||||
16931837-A-C | 14819957-A-C | ** | |||||||
16989216-A-G | 14877336-A-G | ** | |||||||
17006471-T-A | 14894591-T-A | ** | |||||||
17006482-T-A | 14894602-T-A | ** | |||||||
17006504-G-T | 14894624-G-T | ** | |||||||
17052828-A-G | 14940948-A-G | ** | |||||||
17061064-C-T | 14949184-C-T | ** | |||||||
17135904-C-A | 15024024-C-A | ** | |||||||
17181717-T-C | 15069837-T-C | ** | |||||||
17225935-G-C | 15114055-G-C | ** | |||||||
17313493-G-C | 15201613-G-C | ** | |||||||
17318118-C-A | 15206238-C-A | ** | |||||||
17362823-G-T | 15250943-G-T | ** | |||||||
17492187-C-A | 15380307-C-A | ** | |||||||
17514092-C-A | 15402212-C-A | ** | |||||||
17602419-C-A | 15490539-C-A | ** | |||||||
18036005-C-A | 15924125-C-A | ** | |||||||
18183170-A-G | 16071290-A-G | ** | |||||||
18272939-TTTTTTGG-T | 16161059-TTTTTTGG-T | P6_Prx | ** | ||||||
18408196-C-A | 16296316-C-A | P6_Gap | ** | ||||||
18529099-A-G | 16417219-A-G | P6_Dst | ** | ||||||
18627527-T-G | 16515647-T-G | ** | |||||||
18707114-A-G | 16595234-A-G | ** | |||||||
18754867-G-T | 16642987-G-T | ** | |||||||
18924801-C-A | 16812921-C-A | ** | |||||||
19052139-C-A | 16940259-C-A | ** | |||||||
19064934-C-A | 16953054-C-A | 8×A | ** | ||||||
19123299-CATG-C | 17011419-CATG-C | ** | |||||||
19297920-C-A | 17186040-C-A | ** | |||||||
19330010-C-A | 17218130-C-A | ** | |||||||
19353670-G-T | 17241790-G-T | ** | |||||||
19462295-A-C | 17350415-A-C | ** | |||||||
20458582-T-C | 18296696-T-C | P5_Dst | ** | ||||||
20614785-G-T | 18452899-G-T | P4_Prx | ** | ||||||
20871651-C-A | 18709765-C-A | P4_Dst | ** | ||||||
21113027-T-C | 18951141-T-C | ** | |||||||
21124560-G-T | 18962674-G-T | ** | |||||||
21267974-G-T | 19106088-G-T | ** | |||||||
21391607-A-C | 19229721-A-C | ** | |||||||
21446374-C-G | 19284488-C-G | ** | |||||||
21551861-A-T | 19389975-A-T | ** | |||||||
21658549-C-T | 19496663-C-T | ** | |||||||
21802841-C-A | 19640955-C-A | ** | |||||||
21846492-C-T | 19684606-C-T | ** | |||||||
22088865-TG-T | 19926979-TG-T | ** | |||||||
22091152-C-A | 19929266-C-A | ** | |||||||
22548389-C-A | 20386503-C-A | ** | |||||||
22625095-C-A | 20463209-C-A | ** | |||||||
22730518-A-G | 20568632-A-G | ** | |||||||
22798218-A-C | 20636332-A-C | ** | |||||||
22801352-T-G | 20639466-T-G | ** | |||||||
22843720-C-A | 20681834-C-A | FT124379 | ** | ||||||
22846029-C-A | 20684143-C-A | ** | |||||||
23007056-T-C | 20845170-T-C | ** | |||||||
23050441-G-A | 20888555-G-A | ** | |||||||
23059724-C-A | 20897838-C-A | ** | |||||||
23065134-C-A | 20903248-C-A | ** | |||||||
23337090-C-A | 21175204-C-A | ** | |||||||
23475389-G-T | 21313503-G-T | ** | |||||||
23475476-C-T | 21313590-C-T | ** | |||||||
23522335-A-G | 21360449-A-G | ** | |||||||
23723517-G-A | 21561631-G-A | ** | |||||||
23729028-C-A | 21567142-C-A | ** | |||||||
23808069-C-A | 21646183-C-A | ** | |||||||
23810746-T-C | 21648860-T-C | ** | |||||||
23848651-C-A | 21686765-C-A | ** | |||||||
25858397-A-AG | 23712250-A-AG | P1_Y1 | ** | ||||||
26010248-T-A | 23864101-T-A | P1_Y1 | ** | ||||||
26133133-T-G | 23986986-T-G | P1_Y1 | ** | ||||||
27616372-T-G | 25470225-T-G | P1_Y2 | ** | ||||||
27847932-T-C | 25701785-T-C | P1_Y2 | ** | ||||||
28111523-C-A | 25965376-C-A | P1_Y2 | ** | ||||||
28476839-C-A | 26330692-C-A | ** | |||||||
28484648-C-A | 26338501-C-A | ** | |||||||
28504512-A-G | 26358365-A-G | ** | |||||||
28632892-TG-T | 26486745-TG-T | ** | |||||||
28643723-A-G | 26497576-A-G | ** | |||||||
28653913-C-A | 26507766-C-A | ** | |||||||
28669896-C-A | 26523749-C-A | ** | |||||||
28684420-C-A | 26538273-C-A | ** | |||||||
28707374-T-C | 26561227-T-C | ** | |||||||
28722706-T-A | 26576559-T-A | ** | |||||||
28758034-AG-A | 26611887-AG-A | ** | |||||||
28765514-A-C | 26619367-A-C | ** | |||||||
28773986-C-A | 26627839-C-A | ** | |||||||
56849891-A-G | ** | ||||||||
56850934-T-A | ** | ||||||||
56854531-C-A | ** | ||||||||
56870848-C-A | ** | ||||||||
30145-A-G | ** | ||||||||
9645673-TG-T | 9808064-TG-T | IR3_Prx | *** | ||||||
8022633-G-C | 8154592-G-C | Z2345 PF4657 | *** | ||||||
13463637-C-G | 11307961-C-G | *** | |||||||
21388802-T-G | 19226916-T-G | Z2374 FGC7627 AM01340 | *** | ||||||
24952352-A-G | 22806205-A-G | g1 | *** | ||||||
25403972-A-G | 23257825-A-G | P2_r2 | *** | ||||||
8773858-CAAAAA-C | 8905817-CAAAAA-C | 16×A | *** | ||||||
19048949-T-A | 16937069-T-A | *** | |||||||
10667042-T-G | *** | ||||||||
10961445-C-A | *** | ||||||||
21895622-T-G | 19733736-T-G | *** | |||||||
56826529-A-C,T | *** | ||||||||
18867375-C-A | 16755495-C-A | *** | |||||||
13461962-C-T | 11306286-C-T | *** | |||||||
13480440-C-A | 11324764-C-A | *** | |||||||
15967502-C-T | 13855622-C-T | *** | |||||||
10880294-T-G | *** | ||||||||
10880296-C-G | *** | ||||||||
10880325-T-TACA | *** | ||||||||
58856052-G-C | 56734819-C-G | *** | |||||||
17657331-TA-T | 15545451-TA-T | 10×A | *** | ||||||
11014512-C-A | BY84145 | *** | |||||||
8481808-CTT-C,CT | 8613767-CTT-C,CT | 11×T | *** | ||||||
13480461-A-C | 11324785-A-C | *** | |||||||
28799748-G-T | 26653601-G-T | *** | |||||||
10961444-T-A | *** | ||||||||
10873087-C-A | *** | ||||||||
21895449-C-A | 19733563-C-A | *** | |||||||
18758875-C-A | 16646995-C-A | *** | |||||||
10873077-G-T | *** | ||||||||
10873088-C-A | *** | ||||||||
10873090-T-A | *** | ||||||||
7285094-C-A | 7417053-C-A | Y83803 | *** | ||||||
56836751-C-A,T | *** | ||||||||
6757857-G-T | 6889816-G-T | *** | |||||||
10971260-C-CGGAAG | *** | ||||||||
10971274-C-G | *** | ||||||||
15931482-C-A | 13819602-C-A | *** | |||||||
22122122-C-A | 19960236-C-A | *** | |||||||
13480466-C-A | 11324790-C-A | *** | |||||||
3272894-C-A | 3404853-C-A | *** | |||||||
7436324-C-A | 7568283-C-A | *** | |||||||
8221228-CTTTT-C,CTTT | 8353187-CTTTT-C,CTTT | 16×T | *** | ||||||
2746115-TGA-T | 2878074-TGA-T | *** | |||||||
6729618-G-T | 6861577-G-T | *** | |||||||
6765574-C-A | 6897533-C-A | *** | |||||||
7142537-G-A | 7274496-G-A | *** | |||||||
7304749-C-A | 7436708-C-A | *** | |||||||
7400286-G-T | 7532245-G-T | *** | |||||||
8907863-C-A | 9039822-C-A | *** | |||||||
10752434-C-A | *** | ||||||||
10850564-C-A | *** | ||||||||
10961438-C-G | *** | ||||||||
11014521-C-T | *** | ||||||||
13454463-A-G | 11298787-A-G | *** | |||||||
13463670-C-A | 11307994-C-A | *** | |||||||
13463684-G-A | 11308008-G-A | FT443966 | *** | ||||||
13480442-G-A | 11324766-G-A | *** | |||||||
14926257-A-T | 12814322-A-T | *** | |||||||
15743140-T-C | 13631260-T-C | *** | |||||||
16057215-C-A | 13945335-C-A | FT117373 | *** | ||||||
28111779-G-T | 25965632-G-T | P1_Y2 | *** | ||||||
56827531-C-A | *** | ||||||||
56836753-C-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.