Botts
FTDNA: 239563, BigY2: 239563Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 239563 | BigY2 239563 |
---|---|---|---|---|---|---|---|---|
hg19:Y:22304961-G-T hg38:Y:20143075-G-T | DYZ19 | *** | A* | |||||
hg19:Y:21563633-G-A hg38:Y:19401747-G-A | BY133876 | Y | Y | + | + | |||
hg19:Y:22507112-C-A hg38:Y:20345226-C-A | BY225312 | DYZ19 | ** | + | ||||
hg19:Y:25130693-A-G hg38:Y:22984546-A-G | g1 | + | ||||||
hg19:Y:28795487-T-A hg38:Y:26649340-T-A | * | |||||||
hg19:Y:5241238-CTTTTT-C hg38:Y:5373197-CTTTTT-C | 15×T | ** | ||||||
hg19:Y:6493973-G-A hg38:Y:6625932-G-A | ** | |||||||
hg19:Y:13394846-G-T hg38:Y:11239170-G-T | ** | |||||||
hg19:Y:16060729-G-A hg38:Y:13948849-G-A | ** | |||||||
hg19:Y:16480170-G-A hg38:Y:14368290-G-A | ** | |||||||
hg19:Y:6930884-C-A hg38:Y:7062843-C-A | ** | ** | ||||||
hg19:Y:15376487-G-GT hg38:Y:13264607-G-GT | 9×T | ** | ||||||
hg19:Y:5420624-G-A hg38:Y:5552583-G-A | FGC25194 | ** | ||||||
hg19:Y:8214215-G-T hg38:Y:8346174-G-T | ** | |||||||
hg19:Y:23285214-C-A hg38:Y:21123328-C-A | ** | |||||||
hg19:Y:27966855-CTG-C hg38:Y:25820708-CTG-C | P1_Y2 | ** | ||||||
hg19:Y:16932058-C-A hg38:Y:14820178-C-A | ** | |||||||
hg19:Y:4093409-C-A hg38:Y:4225368-C-A | ** | |||||||
hg19:Y:20019186-T-A hg38:Y:17907306-T-A | P5_Prx | ** | ||||||
hg38:Y:10656307-C-CTCGGCTCCAT | ** | |||||||
hg38:Y:11026026-T-G | ** | |||||||
hg19:Y:14053357-C-A hg38:Y:11932651-C-A | ** | |||||||
hg19:Y:4995537-C-A hg38:Y:5127496-C-A | ** | |||||||
hg19:Y:8913044-C-A hg38:Y:9045003-C-A | ** | |||||||
hg19:Y:13487726-C-T hg38:Y:11332050-C-T | ** | |||||||
hg19:Y:24244550-G-T hg38:Y:22098403-G-T | P3_b1 | ** | ||||||
hg19:Y:7160925-C-A hg38:Y:7292884-C-A | ** | |||||||
hg19:Y:17061622-G-T hg38:Y:14949742-G-T | ** | |||||||
hg19:Y:18050422-C-A hg38:Y:15938542-C-A | ** | |||||||
hg38:Y:10669000-C-A | ** | |||||||
hg19:Y:8002457-C-A hg38:Y:8134416-C-A | ** | |||||||
hg19:Y:6415093-A-G hg38:Y:6547052-A-G | ** | |||||||
hg19:Y:21409414-C-A hg38:Y:19247528-C-A | ** | |||||||
hg19:Y:15909276-C-A hg38:Y:13797396-C-A | ** | |||||||
hg19:Y:7228383-C-A hg38:Y:7360342-C-A | ** | |||||||
hg38:Y:10678544-A-T | ** | |||||||
hg19:Y:9940092-C-A hg38:Y:10102483-C-A | ** | |||||||
hg19:Y:4075811-G-T hg38:Y:4207770-G-T | ** | |||||||
hg38:Y:10804790-C-CATTGA | ** | |||||||
hg38:Y:10804795-C-CATTGA | ** | |||||||
hg19:Y:15321367-G-T hg38:Y:13209485-G-T | FT246083 | ** | ||||||
hg19:Y:15676827-C-A hg38:Y:13564947-C-A | ** | |||||||
hg19:Y:17093596-C-A hg38:Y:14981716-C-A | ** | |||||||
hg19:Y:21029434-C-A hg38:Y:18867548-C-A | P4_Dst | ** | ||||||
hg19:Y:2746016-C-A hg38:Y:2877975-C-A | ** | |||||||
hg19:Y:5495364-C-A hg38:Y:5627323-C-A | ** | |||||||
hg19:Y:3032594-C-A hg38:Y:3164553-C-A | ** | |||||||
hg19:Y:4646481-G-A hg38:Y:4778440-G-A | ** | |||||||
hg38:Y:10866967-C-A | ** | |||||||
hg19:Y:18703215-C-A hg38:Y:16591335-C-A | ** | |||||||
hg19:Y:4798604-C-A hg38:Y:4930563-C-A | ** | |||||||
hg19:Y:9927401-C-A hg38:Y:10089792-C-A | ** | |||||||
hg19:Y:17130107-A-T hg38:Y:15018227-A-T | ** | |||||||
hg19:Y:16241578-C-A hg38:Y:14129698-C-A | ** | |||||||
hg38:Y:11029745-C-T | ** | |||||||
hg19:Y:6403532-T-C hg38:Y:6535491-T-C | ** | |||||||
hg19:Y:14384340-G-T hg38:Y:12263636-G-T | ** | |||||||
hg19:Y:9063629-C-A hg38:Y:9226020-C-A | ** | |||||||
hg19:Y:9965907-T-G hg38:Y:10128298-T-G | ** | |||||||
hg19:Y:15060622-C-A hg38:Y:12948714-C-A | ** | |||||||
hg19:Y:28585791-C-A hg38:Y:26439644-C-A | ** | |||||||
hg19:Y:14080114-A-G hg38:Y:11959408-A-G | ** | |||||||
hg19:Y:7062742-C-A hg38:Y:7194701-C-A | ** | |||||||
hg19:Y:23137518-G-T hg38:Y:20975632-G-T | ** | |||||||
hg19:Y:5216340-C-A hg38:Y:5348299-C-A | ** | |||||||
hg38:Y:11028112-C-T | ** | |||||||
hg19:Y:17644227-C-A hg38:Y:15532347-C-A | ** | |||||||
hg19:Y:3272053-C-A hg38:Y:3404012-C-A | ** | |||||||
hg38:Y:10980536-C-T | ** | |||||||
hg19:Y:9937033-C-A hg38:Y:10099424-C-A | ** | |||||||
hg19:Y:28534418-C-A hg38:Y:26388271-C-A | ** | |||||||
hg38:Y:21754447-G-T | ** | |||||||
hg19:Y:13488934-T-C hg38:Y:11333258-T-C | ** | |||||||
hg38:Y:11650514-C-A | DYZ17 | ** | ||||||
hg19:Y:15221228-C-A hg38:Y:13109314-C-A | ** | |||||||
hg19:Y:22236919-A-G hg38:Y:20075033-A-G | DYZ19 | ** | ||||||
hg19:Y:7139076-C-A hg38:Y:7271035-C-A | ** | |||||||
hg19:Y:17342907-C-A hg38:Y:15231027-C-A | ** | |||||||
hg38:Y:11028127-T-C | ** | |||||||
hg38:Y:10663841-CCATTT-C | ** | |||||||
hg19:Y:22065217-C-A hg38:Y:19903331-C-A | ** | |||||||
hg19:Y:28529530-C-A hg38:Y:26383383-C-A | ** | |||||||
hg19:Y:15570844-C-A hg38:Y:13458964-C-A | ** | |||||||
hg19:Y:5604015-C-A hg38:Y:5735974-C-A | ** | |||||||
hg19:Y:15742207-C-A hg38:Y:13630327-C-A | ** | |||||||
hg19:Y:5924381-C-A hg38:Y:6056340-C-A | ** | |||||||
hg38:Y:10663745-C-A | ** | |||||||
hg19:Y:3047176-C-A hg38:Y:3179135-C-A | ** | |||||||
hg19:Y:15424538-C-A hg38:Y:13312658-C-A | ** | |||||||
hg19:Y:14412906-C-A hg38:Y:12292203-C-A | ** | |||||||
hg19:Y:3052342-C-A hg38:Y:3184301-C-A | ** | |||||||
hg19:Y:13588277-A-G hg38:Y:11432601-A-G | ** | |||||||
hg19:Y:26025636-T-C hg38:Y:23879489-T-C | P1_Y1 | ** | ||||||
hg19:Y:7107064-G-T hg38:Y:7239023-G-T | ** | |||||||
hg19:Y:17831207-CTTTTT-C hg38:Y:15719327-CTTTTT-C | 17×T | ** | ||||||
hg19:Y:28533700-GTTTT-G hg38:Y:26387553-GTTTT-G | 15×T | ** | ||||||
hg19:Y:10011196-G-T hg38:Y:10173587-G-T | ** | |||||||
hg19:Y:17211389-C-A hg38:Y:15099509-C-A | ** | |||||||
hg19:Y:7015248-C-A hg38:Y:7147207-C-A | ** | |||||||
hg38:Y:11028128-T-A | ** | |||||||
hg38:Y:10893137-A-C | ** | |||||||
hg19:Y:16952938-C-A hg38:Y:14841058-C-A | ** | |||||||
hg19:Y:17244513-G-T hg38:Y:15132633-G-T | ** | |||||||
hg19:Y:14700872-G-A hg38:Y:12588938-G-A | ** | |||||||
hg19:Y:14034823-G-T hg38:Y:11914117-G-T | ** | |||||||
hg19:Y:7248602-C-A hg38:Y:7380561-C-A | ** | |||||||
hg19:Y:13859208-TGGAAC-T hg38:Y:11738502-TGGAAC-T | DYZ17 | ** | ||||||
hg19:Y:14911070-G-C hg38:Y:12799137-G-C | ** | |||||||
hg19:Y:16701894-G-T hg38:Y:14590014-G-T | ** | |||||||
hg19:Y:23184784-C-A hg38:Y:21022898-C-A | ** | |||||||
hg19:Y:4604895-C-A hg38:Y:4736854-C-A | ** | |||||||
hg19:Y:16490017-C-A hg38:Y:14378137-C-A | ** | |||||||
hg38:Y:10662530-G-T | ** | |||||||
hg19:Y:14992898-C-T hg38:Y:12880983-C-T | Y19386 | ** | ||||||
hg19:Y:4888415-C-A hg38:Y:5020374-C-A | ** | |||||||
hg19:Y:22268543-G-GT hg38:Y:20106657-G-GT | DYZ19 | ** | ||||||
hg19:Y:28484812-C-A hg38:Y:26338665-C-A | ** | |||||||
hg38:Y:10802067-A-T | ** | |||||||
hg38:Y:10802081-C-T | ** | |||||||
hg38:Y:10802087-ATTCCT-A | ** | |||||||
hg38:Y:10802113-C-A | FT213908 | ** | ||||||
hg38:Y:10802121-C-A | ** | |||||||
hg38:Y:10836739-C-A | ** | |||||||
hg19:Y:28531883-C-A hg38:Y:26385736-C-A | ** | |||||||
hg19:Y:23563731-C-A hg38:Y:21401845-C-A | ** | |||||||
hg19:Y:7135386-A-ATT hg38:Y:7267345-A-ATT | 22×T | ** | ||||||
hg19:Y:17504175-G-T hg38:Y:15392295-G-T | ** | |||||||
hg38:Y:10790275-A-T | ** | |||||||
hg19:Y:23358888-C-A hg38:Y:21197002-C-A | ** | |||||||
hg38:Y:10999681-C-A | ** | |||||||
hg19:Y:7254614-C-A hg38:Y:7386573-C-A | ** | |||||||
hg19:Y:25963868-T-C hg38:Y:23817721-T-C | P1_Y1 | ** | ||||||
hg38:Y:10895798-T-A | ** | |||||||
hg19:Y:14792818-C-A hg38:Y:12680889-C-A | ** | |||||||
hg38:Y:10912336-C-A | ** | |||||||
hg19:Y:28658555-C-A hg38:Y:26512408-C-A | ** | |||||||
hg19:Y:19507106-C-A hg38:Y:17395226-C-A | ** | |||||||
hg38:Y:11000720-C-T | ** | |||||||
hg19:Y:16032406-C-A hg38:Y:13920526-C-A | ** | |||||||
hg19:Y:13945305-C-A hg38:Y:11824599-C-A | ** | |||||||
hg38:Y:10802072-ACTCCG-A | ** | |||||||
hg19:Y:13984280-C-A hg38:Y:11863574-C-A | ** | |||||||
hg19:Y:2674184-T-A hg38:Y:2806143-T-A | ** | |||||||
hg19:Y:2774920-C-A hg38:Y:2906879-C-A | ** | |||||||
hg19:Y:2928565-C-A hg38:Y:3060524-C-A | ** | |||||||
hg19:Y:2974419-C-A hg38:Y:3106378-C-A | ** | |||||||
hg19:Y:2989614-C-A hg38:Y:3121573-C-A | ** | |||||||
hg19:Y:3008088-C-A hg38:Y:3140047-C-A | ** | |||||||
hg19:Y:3088822-G-T hg38:Y:3220781-G-T | ** | |||||||
hg19:Y:3093241-G-T hg38:Y:3225200-G-T | ** | |||||||
hg19:Y:3130748-C-A hg38:Y:3262707-C-A | ** | |||||||
hg19:Y:3343014-C-A hg38:Y:3474973-C-A | ** | |||||||
hg19:Y:3345691-C-A hg38:Y:3477650-C-A | ** | |||||||
hg19:Y:3367228-A-C hg38:Y:3499187-A-C | ** | |||||||
hg19:Y:3405481-A-G hg38:Y:3537440-A-G | ** | |||||||
hg19:Y:3410520-G-T hg38:Y:3542479-G-T | ** | |||||||
hg19:Y:3413140-C-T hg38:Y:3545099-C-T | ** | |||||||
hg19:Y:3725778-C-A hg38:Y:3857737-C-A | ** | |||||||
hg19:Y:3749384-T-A hg38:Y:3881343-T-A | ** | |||||||
hg19:Y:3749427-G-C hg38:Y:3881386-G-C | ** | |||||||
hg19:Y:3769770-A-T hg38:Y:3901729-A-T | ** | |||||||
hg19:Y:3769778-G-T hg38:Y:3901737-G-T | ** | |||||||
hg19:Y:3828666-G-T hg38:Y:3960625-G-T | ** | |||||||
hg19:Y:3847459-C-A hg38:Y:3979418-C-A | ** | |||||||
hg19:Y:3877150-C-T hg38:Y:4009109-C-T | ** | |||||||
hg19:Y:4003088-C-A hg38:Y:4135047-C-A | ** | |||||||
hg19:Y:4063843-C-G hg38:Y:4195802-C-G | ** | |||||||
hg19:Y:4063919-G-A hg38:Y:4195878-G-A | ** | |||||||
hg19:Y:4164760-C-A hg38:Y:4296719-C-A | ** | |||||||
hg19:Y:4240933-A-G hg38:Y:4372892-A-G | ** | |||||||
hg19:Y:4301835-T-A hg38:Y:4433794-T-A | ** | |||||||
hg19:Y:4460208-G-T hg38:Y:4592167-G-T | ** | |||||||
hg19:Y:4470662-C-T hg38:Y:4602621-C-T | ** | |||||||
hg19:Y:4505310-T-C hg38:Y:4637269-T-C | ** | |||||||
hg19:Y:4547972-C-A hg38:Y:4679931-C-A | ** | |||||||
hg19:Y:4554584-A-G hg38:Y:4686543-A-G | ** | |||||||
hg19:Y:4586180-A-T hg38:Y:4718139-A-T | ** | |||||||
hg19:Y:4847441-G-A hg38:Y:4979400-G-A | ** | |||||||
hg19:Y:4847447-T-A hg38:Y:4979406-T-A | 11×A | ** | ||||||
hg19:Y:4900374-G-T hg38:Y:5032333-G-T | ** | |||||||
hg19:Y:4969126-C-A hg38:Y:5101085-C-A | ** | |||||||
hg19:Y:5125546-G-T hg38:Y:5257505-G-T | ** | |||||||
hg19:Y:5190096-AT-A hg38:Y:5322055-AT-A | ** | |||||||
hg19:Y:5232231-C-A hg38:Y:5364190-C-A | ** | |||||||
hg19:Y:5322404-G-T hg38:Y:5454363-G-T | ** | |||||||
hg19:Y:5388672-T-C hg38:Y:5520631-T-C | ** | |||||||
hg19:Y:5461999-G-T hg38:Y:5593958-G-T | ** | |||||||
hg19:Y:5511845-C-A hg38:Y:5643804-C-A | ** | |||||||
hg19:Y:5605663-G-T hg38:Y:5737622-G-T | ** | |||||||
hg19:Y:5605964-T-C hg38:Y:5737923-T-C | ** | |||||||
hg19:Y:5627869-T-C hg38:Y:5759828-T-C | ** | |||||||
hg19:Y:5658613-C-A hg38:Y:5790572-C-A | ** | |||||||
hg19:Y:5689954-C-A hg38:Y:5821913-C-A | ** | |||||||
hg19:Y:5755115-C-A hg38:Y:5887074-C-A | ** | |||||||
hg19:Y:5859304-G-A hg38:Y:5991263-G-A | ** | |||||||
hg19:Y:6031592-C-A hg38:Y:6163551-C-A | ** | |||||||
hg19:Y:6054773-G-T hg38:Y:6186732-G-T | ** | |||||||
hg19:Y:6167461-T-C hg38:Y:6299420-T-C | IR3_Dst | ** | ||||||
hg19:Y:6430750-G-T hg38:Y:6562709-G-T | ** | |||||||
hg19:Y:6585463-C-T hg38:Y:6717422-C-T | ** | |||||||
hg19:Y:6592346-T-A hg38:Y:6724305-T-A | ** | |||||||
hg19:Y:6624305-G-T hg38:Y:6756264-G-T | ** | |||||||
hg19:Y:6642292-C-A hg38:Y:6774251-C-A | ** | |||||||
hg19:Y:6648555-A-T hg38:Y:6780514-A-T | ** | |||||||
hg19:Y:6709191-C-T hg38:Y:6841150-C-T | ** | |||||||
hg19:Y:6786555-C-A hg38:Y:6918514-C-A | ** | |||||||
hg19:Y:6828590-T-C hg38:Y:6960549-T-C | ** | |||||||
hg19:Y:6892365-C-A hg38:Y:7024324-C-A | ** | |||||||
hg19:Y:6934673-C-A hg38:Y:7066632-C-A | ** | |||||||
hg19:Y:6978231-G-A hg38:Y:7110190-G-A | FT211880 | ** | ||||||
hg19:Y:7033383-G-T hg38:Y:7165342-G-T | ** | |||||||
hg19:Y:7097903-C-A hg38:Y:7229862-C-A | ** | |||||||
hg19:Y:7159222-C-T hg38:Y:7291181-C-T | ** | |||||||
hg19:Y:7159223-A-AT hg38:Y:7291182-A-AT | ** | |||||||
hg19:Y:7197531-A-T hg38:Y:7329490-A-T | ** | |||||||
hg19:Y:7221640-G-C hg38:Y:7353599-G-C | ** | |||||||
hg19:Y:7306490-A-G hg38:Y:7438449-A-G | ** | |||||||
hg19:Y:7309993-C-T hg38:Y:7441952-C-T | ** | |||||||
hg19:Y:7313283-C-T hg38:Y:7445242-C-T | ** | |||||||
hg19:Y:7341495-A-G hg38:Y:7473454-A-G | ** | |||||||
hg19:Y:7418643-A-T hg38:Y:7550602-A-T | ** | |||||||
hg19:Y:7422943-C-A hg38:Y:7554902-C-A | ** | |||||||
hg19:Y:7504808-G-T hg38:Y:7636767-G-T | IR1_L | ** | ||||||
hg19:Y:7643073-G-A hg38:Y:7775032-G-A | ** | |||||||
hg19:Y:7717666-CTCTT-C hg38:Y:7849625-CTCTT-C | 5×TCTT | ** | ||||||
hg19:Y:7753276-T-C hg38:Y:7885235-T-C | ** | |||||||
hg19:Y:7757027-G-T hg38:Y:7888986-G-T | ** | |||||||
hg19:Y:7986096-C-G hg38:Y:8118055-C-G | ** | |||||||
hg19:Y:8073899-C-A hg38:Y:8205858-C-A | ** | |||||||
hg19:Y:8736418-T-A hg38:Y:8868377-T-A | ** | |||||||
hg19:Y:8840602-C-A hg38:Y:8972561-C-A | ** | |||||||
hg38:Y:9111520-C-A | ** | |||||||
hg19:Y:9508401-T-A hg38:Y:9670792-T-A | ** | |||||||
hg19:Y:9927470-T-A hg38:Y:10089861-T-A | ** | |||||||
hg19:Y:9931401-C-A hg38:Y:10093792-C-A | ** | |||||||
hg19:Y:10026773-CT-C hg38:Y:10189164-CT-C | ** | |||||||
hg19:Y:10051371-G-A hg38:Y:10213762-G-A | ** | |||||||
hg38:Y:10668444-C-A | ** | |||||||
hg38:Y:10683497-C-A | ** | |||||||
hg38:Y:10770153-C-A | ** | |||||||
hg38:Y:10776288-T-A | ** | |||||||
hg38:Y:10785033-T-A | ** | |||||||
hg38:Y:10805324-C-T | ** | |||||||
hg38:Y:10807489-T-C | ** | |||||||
hg38:Y:10814617-T-C | ** | |||||||
hg38:Y:10895772-A-C | ** | |||||||
hg38:Y:10895787-A-ATTTCT | ** | |||||||
hg38:Y:10895803-T-A | ** | |||||||
hg38:Y:10895810-C-A | ** | |||||||
hg38:Y:10906595-A-G | ** | |||||||
hg38:Y:10913906-A-G | ** | |||||||
hg38:Y:10954454-T-C | ** | |||||||
hg38:Y:10964437-C-T | ** | |||||||
hg38:Y:10970680-T-G | ** | |||||||
hg38:Y:10973663-A-G | ** | |||||||
hg38:Y:10981275-C-T | ** | |||||||
hg38:Y:11007747-C-A | ** | |||||||
hg38:Y:11008968-C-A | ** | |||||||
hg38:Y:11012470-C-G | ** | |||||||
hg19:Y:13255700-T-C hg38:Y:11100024-T-C | ** | |||||||
hg19:Y:13374655-C-A hg38:Y:11218979-C-A | ** | |||||||
hg19:Y:13467931-G-C hg38:Y:11312255-G-C | ** | |||||||
hg19:Y:13467998-G-C hg38:Y:11312322-G-C | ** | |||||||
hg19:Y:13487727-ATC-A hg38:Y:11332051-ATC-A | ** | |||||||
hg19:Y:13513603-C-A hg38:Y:11357927-C-A | ** | |||||||
hg19:Y:13588283-T-C hg38:Y:11432607-T-C | ** | |||||||
hg19:Y:13606585-C-G hg38:Y:11450909-C-G | ** | |||||||
hg19:Y:13621640-G-A hg38:Y:11465964-G-A | ** | |||||||
hg19:Y:13715136-G-A hg38:Y:11559460-G-A | DYZ17 | ** | ||||||
hg38:Y:11659130-T-A | DYZ17 | ** | ||||||
hg38:Y:11663693-A-T | DYZ17 | ** | ||||||
hg38:Y:11665967-A-C | DYZ17 | ** | ||||||
hg38:Y:11671671-G-C | DYZ17 | ** | ||||||
hg38:Y:11673276-G-T | DYZ17 | ** | ||||||
hg38:Y:11673401-G-C | DYZ17 | ** | ||||||
hg19:Y:13854538-G-T hg38:Y:11733832-G-T | DYZ17 | ** | ||||||
hg19:Y:13891656-C-A hg38:Y:11770950-C-A | ** | |||||||
hg19:Y:13894742-A-G hg38:Y:11774036-A-G | ** | |||||||
hg19:Y:13896957-T-C hg38:Y:11776251-T-C | ** | |||||||
hg19:Y:13930064-C-A hg38:Y:11809358-C-A | ** | |||||||
hg19:Y:13932322-C-T hg38:Y:11811616-C-T | ** | |||||||
hg19:Y:14007575-C-A hg38:Y:11886869-C-A | ** | |||||||
hg19:Y:14168194-A-T hg38:Y:12047488-A-T | ** | |||||||
hg19:Y:14174944-A-G hg38:Y:12054238-A-G | ** | |||||||
hg19:Y:14278969-G-T hg38:Y:12158263-G-T | ** | |||||||
hg19:Y:14457116-C-T hg38:Y:12336389-C-T | ** | |||||||
hg19:Y:14457119-A-G hg38:Y:12336392-A-G | ** | |||||||
hg19:Y:14459996-CA-C hg38:Y:12339269-CA-C | ** | |||||||
hg19:Y:14500182-G-T hg38:Y:12388387-G-T | ** | |||||||
hg19:Y:14511170-C-A hg38:Y:12399375-C-A | ** | |||||||
hg19:Y:14533375-C-A hg38:Y:12421576-C-A | ** | |||||||
hg19:Y:14546433-CAT-C hg38:Y:12434634-CAT-C | ** | |||||||
hg19:Y:14560190-A-AT hg38:Y:12448391-A-AT | 10×T | ** | ||||||
hg19:Y:14589283-T-A hg38:Y:12477483-T-A | ** | |||||||
hg19:Y:14593670-C-A hg38:Y:12481870-C-A | ** | |||||||
hg19:Y:14606340-A-G hg38:Y:12494542-A-G | ** | |||||||
hg19:Y:14639163-C-G hg38:Y:12527232-C-G | ** | |||||||
hg19:Y:14669626-G-T hg38:Y:12557692-G-T | ** | |||||||
hg19:Y:14693738-C-T hg38:Y:12581804-C-T | ** | |||||||
hg19:Y:14760921-C-A hg38:Y:12648990-C-A | ** | |||||||
hg19:Y:14963746-C-CT hg38:Y:12851821-C-CT | ** | |||||||
hg19:Y:14992891-C-G hg38:Y:12880976-C-G | ** | |||||||
hg19:Y:14992894-G-A hg38:Y:12880979-G-A | ** | |||||||
hg19:Y:15083360-A-G hg38:Y:12971450-A-G | ** | |||||||
hg19:Y:15084354-T-C hg38:Y:12972444-T-C | ** | |||||||
hg19:Y:15106676-G-A hg38:Y:12994764-G-A | ** | |||||||
hg19:Y:15147397-G-T hg38:Y:13035484-G-T | ** | |||||||
hg19:Y:15180151-G-T hg38:Y:13068237-G-T | ** | |||||||
hg19:Y:15287826-G-T hg38:Y:13175925-G-T | ** | |||||||
hg19:Y:15321369-CA-C hg38:Y:13209487-CA-C | ** | |||||||
hg19:Y:15369833-G-T hg38:Y:13257953-G-T | ** | |||||||
hg19:Y:15688388-T-C hg38:Y:13576508-T-C | ** | |||||||
hg19:Y:15700381-A-G hg38:Y:13588501-A-G | ** | |||||||
hg19:Y:15732742-C-A hg38:Y:13620862-C-A | ** | |||||||
hg19:Y:15741710-G-T hg38:Y:13629830-G-T | ** | |||||||
hg19:Y:15760993-A-T hg38:Y:13649113-A-T | ** | |||||||
hg19:Y:15792914-C-A hg38:Y:13681034-C-A | ** | |||||||
hg19:Y:15834101-T-A hg38:Y:13722221-T-A | ** | |||||||
hg19:Y:15916374-C-A hg38:Y:13804494-C-A | ** | |||||||
hg19:Y:15962902-G-T hg38:Y:13851022-G-T | ** | |||||||
hg19:Y:15987389-C-A hg38:Y:13875509-C-A | ** | |||||||
hg19:Y:16001684-C-A hg38:Y:13889804-C-A | ** | |||||||
hg19:Y:16029176-A-C hg38:Y:13917296-A-C | ** | |||||||
hg19:Y:16046468-G-A hg38:Y:13934588-G-A | ** | |||||||
hg19:Y:16050060-C-A hg38:Y:13938180-C-A | ** | |||||||
hg19:Y:16054908-C-A hg38:Y:13943028-C-A | ** | |||||||
hg19:Y:16172044-G-T hg38:Y:14060164-G-T | ** | |||||||
hg19:Y:16214617-C-T hg38:Y:14102737-C-T | ** | |||||||
hg19:Y:16273880-C-A hg38:Y:14162000-C-A | ** | |||||||
hg19:Y:16277861-A-T hg38:Y:14165981-A-T | ** | |||||||
hg19:Y:16296881-C-A hg38:Y:14185001-C-A | ** | |||||||
hg19:Y:16410762-G-C hg38:Y:14298882-G-C | ** | |||||||
hg19:Y:16423749-C-A hg38:Y:14311869-C-A | ** | |||||||
hg19:Y:16653255-C-A hg38:Y:14541375-C-A | ** | |||||||
hg19:Y:16721583-G-T hg38:Y:14609703-G-T | ** | |||||||
hg19:Y:16786180-C-A hg38:Y:14674300-C-A | ** | |||||||
hg19:Y:16932114-G-A hg38:Y:14820234-G-A | ** | |||||||
hg19:Y:16986990-C-A hg38:Y:14875110-C-A | ** | |||||||
hg19:Y:17135938-C-T hg38:Y:15024058-C-T | ** | |||||||
hg19:Y:17157609-C-A hg38:Y:15045729-C-A | ** | |||||||
hg19:Y:17158553-C-A hg38:Y:15046673-C-A | ** | |||||||
hg19:Y:17213131-A-G hg38:Y:15101251-A-G | ** | |||||||
hg19:Y:17246034-T-A hg38:Y:15134154-T-A | ** | |||||||
hg19:Y:17246080-C-A hg38:Y:15134200-C-A | ** | |||||||
hg19:Y:17514089-A-G hg38:Y:15402209-A-G | ** | |||||||
hg19:Y:17527372-ATATG-A hg38:Y:15415492-ATATG-A | ** | |||||||
hg19:Y:17547661-T-A hg38:Y:15435781-T-A | ** | |||||||
hg19:Y:17571908-C-A hg38:Y:15460028-C-A | ** | |||||||
hg19:Y:17581739-C-A hg38:Y:15469859-C-A | ** | |||||||
hg19:Y:17821997-A-G hg38:Y:15710117-A-G | ** | |||||||
hg19:Y:17826157-G-T hg38:Y:15714277-G-T | ** | |||||||
hg19:Y:17968819-C-A hg38:Y:15856939-C-A | ** | |||||||
hg19:Y:18045389-TG-T hg38:Y:15933509-TG-T | ** | |||||||
hg19:Y:18133153-G-T hg38:Y:16021273-G-T | ** | |||||||
hg19:Y:18270458-C-A hg38:Y:16158578-C-A | ** | |||||||
hg19:Y:18422776-C-A hg38:Y:16310896-C-A | P6_Gap | ** | ||||||
hg19:Y:18653207-C-A hg38:Y:16541327-C-A | ** | |||||||
hg19:Y:18702130-T-C hg38:Y:16590250-T-C | ** | |||||||
hg19:Y:18767736-A-G hg38:Y:16655856-A-G | ** | |||||||
hg19:Y:18779221-C-A hg38:Y:16667341-C-A | ** | |||||||
hg19:Y:19000107-T-A hg38:Y:16888227-T-A | ** | |||||||
hg19:Y:19040834-G-T hg38:Y:16928954-G-T | ** | |||||||
hg19:Y:19072024-C-A hg38:Y:16960144-C-A | ** | |||||||
hg19:Y:19081315-T-G hg38:Y:16969435-T-G | ** | |||||||
hg19:Y:19249598-T-C hg38:Y:17137718-T-C | ** | |||||||
hg19:Y:19250223-T-G hg38:Y:17138343-T-G | ** | |||||||
hg19:Y:19250232-A-G hg38:Y:17138352-A-G | ** | |||||||
hg19:Y:19252041-C-A hg38:Y:17140161-C-A | ** | |||||||
hg19:Y:19353368-T-G hg38:Y:17241488-T-G | ** | |||||||
hg19:Y:19524606-TG-T hg38:Y:17412726-TG-T | ** | |||||||
hg19:Y:19609450-G-T hg38:Y:17497570-G-T | P5_Prx | ** | ||||||
hg19:Y:19831875-G-T hg38:Y:17719995-G-T | P5_Prx | ** | ||||||
hg19:Y:19860857-T-TTG hg38:Y:17748977-T-TTG | P5_Prx | ** | ||||||
hg19:Y:20614983-A-G hg38:Y:18453097-A-G | P4_Prx | ** | ||||||
hg19:Y:20692824-G-T hg38:Y:18530938-G-T | P4_Prx | ** | ||||||
hg19:Y:20751098-T-G hg38:Y:18589212-T-G | P4_Prx | ** | ||||||
hg19:Y:20840382-C-A hg38:Y:18678496-C-A | P4_Gap | ** | ||||||
hg19:Y:21048431-T-C hg38:Y:18886545-T-C | ** | |||||||
hg19:Y:21208494-G-T hg38:Y:19046608-G-T | ** | |||||||
hg19:Y:21238344-G-A hg38:Y:19076458-G-A | ** | |||||||
hg19:Y:21672161-C-A hg38:Y:19510275-C-A | ** | |||||||
hg19:Y:21709023-C-A hg38:Y:19547137-C-A | ** | |||||||
hg19:Y:21786064-A-T hg38:Y:19624178-A-T | ** | |||||||
hg19:Y:21821482-C-A hg38:Y:19659596-C-A | ** | |||||||
hg19:Y:21862031-C-A hg38:Y:19700145-C-A | ** | |||||||
hg19:Y:21954653-A-T hg38:Y:19792767-A-T | ** | |||||||
hg19:Y:22051182-C-A hg38:Y:19889296-C-A | ** | |||||||
hg19:Y:22052482-C-G hg38:Y:19890596-C-G | ** | |||||||
hg19:Y:22123128-C-A hg38:Y:19961242-C-A | ** | |||||||
hg19:Y:22209258-A-G hg38:Y:20047372-A-G | ** | |||||||
hg19:Y:22439512-G-A hg38:Y:20277626-G-A | DYZ19 | ** | ||||||
hg19:Y:22690989-A-G hg38:Y:20529103-A-G | ** | |||||||
hg19:Y:22739593-C-A hg38:Y:20577707-C-A | ** | |||||||
hg19:Y:22782816-C-A hg38:Y:20620930-C-A | ** | |||||||
hg19:Y:22787064-C-A hg38:Y:20625178-C-A | ** | |||||||
hg19:Y:22798282-T-C hg38:Y:20636396-T-C | ** | |||||||
hg19:Y:23007000-TGTTCATCA-T hg38:Y:20845114-TGTTCATCA-T | ** | |||||||
hg19:Y:23061252-T-C hg38:Y:20899366-T-C | ** | |||||||
hg19:Y:23185282-T-C hg38:Y:21023396-T-C | ** | |||||||
hg19:Y:23200717-C-A hg38:Y:21038831-C-A | ** | |||||||
hg19:Y:23339083-G-T hg38:Y:21177197-G-T | ** | |||||||
hg19:Y:23439073-T-C hg38:Y:21277187-T-C | ** | |||||||
hg19:Y:23773876-A-T hg38:Y:21611990-A-T | ** | |||||||
hg19:Y:24264747-A-C hg38:Y:22118600-A-C | P3_b1 | ** | ||||||
hg19:Y:24403205-G-C hg38:Y:22257058-G-C | ** | |||||||
hg19:Y:24595360-T-A hg38:Y:22449213-T-A | P3_t2 | ** | ||||||
hg19:Y:25533378-G-A hg38:Y:23387231-G-A | P1_gr1 | ** | ||||||
hg19:Y:25994228-T-TC hg38:Y:23848081-T-TC | P1_Y1 | ** | ||||||
hg19:Y:26071974-A-AG hg38:Y:23925827-A-AG | P1_Y1 | ** | ||||||
hg19:Y:28062650-C-G hg38:Y:25916503-C-G | P1_Y2 | ** | ||||||
hg19:Y:28514607-C-A hg38:Y:26368460-C-A | ** | |||||||
hg19:Y:28542166-C-A hg38:Y:26396019-C-A | ** | |||||||
hg19:Y:28546640-C-T hg38:Y:26400493-C-T | ** | |||||||
hg19:Y:28550017-G-A hg38:Y:26403870-G-A | ** | |||||||
hg19:Y:28585782-G-A hg38:Y:26439635-G-A | ** | |||||||
hg19:Y:28600611-C-A hg38:Y:26454464-C-A | ** | |||||||
hg19:Y:28646024-G-A hg38:Y:26499877-G-A | ** | |||||||
hg19:Y:28656264-G-T hg38:Y:26510117-G-T | ** | |||||||
hg19:Y:28660676-C-A hg38:Y:26514529-C-A | ** | |||||||
hg19:Y:28660712-C-T hg38:Y:26514565-C-T | ** | |||||||
hg38:Y:56844218-G-T | ** | |||||||
hg38:Y:56847286-T-C | ** | |||||||
hg38:Y:56871570-C-A | ** | |||||||
hg38:Y:56871623-T-TAAAA | 9×A | ** | ||||||
hg38:Y:56873863-AAT-A | ** | |||||||
hg38:Y2:18439-G-A | ** | |||||||
hg19:Y:16533607-CAT-C hg38:Y:14421727-CAT-C | *** | |||||||
hg19:Y:18397921-AAT-A hg38:Y:16286041-AAT-A | P6_Gap | *** | ||||||
hg19:Y:23761608-A-AAAGAAGAAGAAGAAG hg38:Y:21599722-A-AAAGAAGAAGAAGAAG | 23×AAG | *** | *** | |||||
hg19:Y:13854303-A-G hg38:Y:11733597-A-G | DYZ17 | *** | ||||||
hg19:Y:13854315-C-A hg38:Y:11733609-C-A | DYZ17 | *** | ||||||
hg19:Y:9978463-G-A hg38:Y:10140854-G-A | *** | |||||||
hg19:Y:24078980-A-T hg38:Y:21932833-A-T | P3_b1 | *** | ||||||
hg19:Y:24308990-T-C hg38:Y:22162843-T-C | P3_t1 | *** | ||||||
hg19:Y:25315919-T-C hg38:Y:23169772-T-C | P2_r1 | *** | ||||||
hg19:Y:25814627-T-G hg38:Y:23668480-T-G | P1_b3 | *** | ||||||
hg19:Y:25839496-T-A hg38:Y:23693349-T-A | P1_b3 | *** | ||||||
hg19:Y:26195863-G-A hg38:Y:24049716-G-A | P1_Y1 | *** | ||||||
hg19:Y:16904729-AGAGT-A hg38:Y:14792849-AGAGT-A | *** | |||||||
hg19:Y:17500760-G-T hg38:Y:15388880-G-T | *** | |||||||
hg19:Y:9371457-CATATAT-C,CATAT hg38:Y:9533848-CATATAT-C,CATAT | 22×AT | *** | ||||||
hg19:Y:13856708-AAATGG-A hg38:Y:11736002-AAATGG-A | DYZ17 | 5×AATGG | *** | |||||
hg19:Y:19075411-C-A hg38:Y:16963531-C-A | *** | |||||||
hg19:Y:23188119-G-T hg38:Y:21026233-G-T | *** | |||||||
hg19:Y:7362048-T-TTATA hg38:Y:7494007-T-TTATA | 10×TA | *** | ||||||
hg19:Y:6855404-C-A hg38:Y:6987363-C-A | *** | |||||||
hg19:Y:5231199-C-A hg38:Y:5363158-C-A | *** | |||||||
hg38:Y:10912465-C-A | *** | |||||||
hg38:Y:56839510-G-A | *** | |||||||
hg38:Y:10955492-ATT-A,ACT | *** | |||||||
hg19:Y:2806199-T-A hg38:Y:2938158-T-A | *** | |||||||
hg19:Y:8344077-G-A hg38:Y:8476036-G-A | *** | |||||||
hg19:Y:10033542-TC-T hg38:Y:10195933-TC-T | *** | |||||||
hg38:Y:10672817-A-G | *** | |||||||
hg38:Y:10912437-C-T | *** | |||||||
hg38:Y:10912439-G-C | *** | |||||||
hg38:Y:10955477-ACACCC-A,ACTCCC | *** | |||||||
hg19:Y:13474153-C-A hg38:Y:11318477-C-A | *** | |||||||
hg19:Y:13839764-TGGAA-T hg38:Y:11719058-TGGAA-T | DYZ17 | *** | ||||||
hg19:Y:13839769-TG-T hg38:Y:11719063-TG-T | DYZ17 | *** | ||||||
hg19:Y:13848271-C-A hg38:Y:11727565-C-A | DYZ17 | *** | ||||||
hg19:Y:14992912-CA-G hg38:Y:12880997-CA-G | *** | |||||||
hg19:Y:14992916-G-A hg38:Y:12881001-G-A | FT9409 | *** | ||||||
hg19:Y:14992920-C-G hg38:Y:12881005-C-G | *** | |||||||
hg19:Y:14992923-C-A hg38:Y:12881008-C-A | *** | |||||||
hg19:Y:16345134-CCT-C hg38:Y:14233254-CCT-C | *** | |||||||
hg19:Y:17788919-C-A hg38:Y:15677039-C-A | *** | |||||||
hg19:Y:23188093-T-C hg38:Y:21026207-T-C | *** | |||||||
hg19:Y:23440190-C-A hg38:Y:21278304-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 239563 | 10814127 | 7903972 | 7996161 |
Kit: 239563 | 9944161 | 8077232 | 7946217 |
Used in age calculations | 10814127 | 8077232 | 7996161 |
Counts of SNPs | 1 | 1 |
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