Atkins
FTDNA: 25841, BigY2: 25841Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 25841 | BigY2 25841 |
|---|---|---|---|---|---|---|---|---|
| hg19:Y:6210235-T-C hg38:Y:6342194-T-C | IR3_Dst | *** | A* | |||||
| hg19:Y:24285791-C-G hg38:Y:22139644-C-G | P3_t1 | *** | A* | |||||
| hg19:Y:25952370-T-A hg38:Y:23806223-T-A | P1_Y1 | *** | A* | |||||
| hg19:Y:6716383-A-G hg38:Y:6848342-A-G | BY60880 | Y | Y | + | + | |||
| hg19:Y:7696117-A-C hg38:Y:7828076-A-C | BY66990 | Y | Y | + | + | |||
| hg19:Y:21477485-G-A hg38:Y:19315599-G-A | BY133193 | Y | Y | + | + | |||
| hg19:Y:21762437-A-G hg38:Y:19600551-A-G | BY135270 | Y | Y | + | + | |||
| hg19:Y:22222002-C-T hg38:Y:20060116-C-T | BY213014 | DYZ19 | *** | + | ||||
| hg19:Y:22262643-C-G hg38:Y:20100757-C-G | DYZ19 | *** | + | |||||
| hg19:Y:22440920-A-T hg38:Y:20279034-A-T | BY218934 | DYZ19 | + | + | ||||
| hg19:Y:13855986-C-A hg38:Y:11735280-C-A | DYZ17 | ** | ||||||
| hg19:Y:3082620-G-T hg38:Y:3214579-G-T | ** | |||||||
| hg19:Y:6434947-A-T hg38:Y:6566906-A-T | ** | |||||||
| hg19:Y:2790318-TG-T hg38:Y:2922277-TG-T | ** | |||||||
| hg19:Y:5845087-T-C hg38:Y:5977046-T-C | Z21567 | ** | ||||||
| hg19:Y:13291562-A-G hg38:Y:11135886-A-G | ** | |||||||
| hg19:Y:14575451-G-A hg38:Y:12463651-G-A | CTS2940 | ** | ** | |||||
| hg19:Y:22317910-A-C hg38:Y:20156024-A-C | DYZ19 | ** | ||||||
| hg19:Y:13855994-T-A hg38:Y:11735288-T-A | DYZ17 | ** | ||||||
| hg19:Y:13856030-C-G hg38:Y:11735324-C-G | DYZ17 | ** | ||||||
| hg19:Y:6934624-T-C hg38:Y:7066583-T-C | ** | |||||||
| hg19:Y:7042924-C-A hg38:Y:7174883-C-A | ** | |||||||
| hg19:Y:4957688-C-A hg38:Y:5089647-C-A | ** | |||||||
| hg19:Y:21554883-C-A hg38:Y:19392997-C-A | ** | |||||||
| hg19:Y:22317932-A-G hg38:Y:20156046-A-G | DYZ19 | ** | ||||||
| hg19:Y:14174631-C-A hg38:Y:12053925-C-A | ** | |||||||
| hg38:Y:10798135-T-C | ** | |||||||
| hg19:Y:22683759-C-A hg38:Y:20521873-C-A | ** | |||||||
| hg19:Y:16020721-C-A hg38:Y:13908841-C-A | ** | |||||||
| hg19:Y:23954154-C-A hg38:Y:21808007-C-A | ** | |||||||
| hg38:Y:10672785-C-A | ** | |||||||
| hg19:Y:8408476-C-T hg38:Y:8540435-C-T | ** | |||||||
| hg19:Y:8408488-T-C hg38:Y:8540447-T-C | ** | |||||||
| hg19:Y:4510096-C-A hg38:Y:4642055-C-A | ** | |||||||
| hg38:Y:10849660-C-G | ** | |||||||
| hg19:Y:20137187-CA-C hg38:Y:18025307-CA-C | P5_Dst | 9×A | ** | |||||
| hg19:Y:13235475-C-A hg38:Y:11079799-C-A | ** | |||||||
| hg19:Y:22079943-C-A hg38:Y:19918057-C-A | ** | |||||||
| hg19:Y:6464895-C-A hg38:Y:6596854-C-A | ** | |||||||
| hg19:Y:22658520-AT-A hg38:Y:20496634-AT-A | 8×T | ** | ||||||
| hg19:Y:17222627-C-A hg38:Y:15110747-C-A | ** | |||||||
| hg19:Y:16017012-C-A hg38:Y:13905132-C-A | ** | |||||||
| hg19:Y:17840436-C-T hg38:Y:15728556-C-T | ** | |||||||
| hg19:Y:3079474-C-A hg38:Y:3211433-C-A | ** | |||||||
| hg19:Y:7579640-C-A hg38:Y:7711599-C-A | ** | |||||||
| hg19:Y:16107443-T-TG hg38:Y:13995563-T-TG | P8_Prx | ** | ||||||
| hg19:Y:7112536-C-A hg38:Y:7244495-C-A | ** | |||||||
| hg19:Y:2892604-C-A hg38:Y:3024563-C-A | ** | |||||||
| hg19:Y:7271317-C-A hg38:Y:7403276-C-A | ** | |||||||
| hg19:Y:5785883-C-A hg38:Y:5917842-C-A | ** | |||||||
| hg38:Y:10798121-T-A | ** | |||||||
| hg38:Y:10798127-T-C | ** | |||||||
| hg19:Y:19739348-A-ACAT hg38:Y:17627468-A-ACAT | P5_Prx | ** | ||||||
| hg38:Y:10772410-G-T | ** | |||||||
| hg38:Y:10826848-T-G | ** | |||||||
| hg38:Y:10826858-C-T | ** | |||||||
| hg38:Y:10826879-C-T | ** | |||||||
| hg19:Y:15126348-C-A hg38:Y:13014435-C-A | ** | |||||||
| hg19:Y:6144628-G-A hg38:Y:6276587-G-A | IR3_Dst | ** | ||||||
| hg19:Y:13258674-C-A hg38:Y:11102998-C-A | ** | |||||||
| hg19:Y:14293611-C-G hg38:Y:12172905-C-G | ** | |||||||
| hg19:Y:16539583-C-A hg38:Y:14427703-C-A | ** | |||||||
| hg19:Y:3849122-C-A hg38:Y:3981081-C-A | ** | |||||||
| hg38:Y:10803382-GTTCCA-G | ** | |||||||
| hg19:Y:15235520-G-A hg38:Y:13123606-G-A | ** | |||||||
| hg19:Y:14432312-C-A hg38:Y:12311585-C-A | ** | |||||||
| hg19:Y:23341996-G-T hg38:Y:21180110-G-T | ** | |||||||
| hg19:Y:15401893-C-A hg38:Y:13290013-C-A | Y40961 | ** | ||||||
| hg19:Y:14354569-C-A hg38:Y:12233864-C-A | ** | |||||||
| hg19:Y:13937380-C-A hg38:Y:11816674-C-A | ** | |||||||
| hg19:Y:21371018-C-A hg38:Y:19209132-C-A | ** | |||||||
| hg38:Y:11013374-C-A | ** | |||||||
| hg19:Y:14245051-C-A hg38:Y:12124345-C-A | ** | |||||||
| hg19:Y:7207358-CA-C hg38:Y:7339317-CA-C | ** | |||||||
| hg38:Y:10942645-T-A | ** | |||||||
| hg38:Y:10942652-C-T | ** | |||||||
| hg38:Y:10942660-T-A | ** | |||||||
| hg19:Y:7241163-C-A hg38:Y:7373122-C-A | ** | |||||||
| hg19:Y:20959067-G-T hg38:Y:18797181-G-T | P4_Dst | ** | ||||||
| hg19:Y:21134856-C-A hg38:Y:18972970-C-A | ** | |||||||
| hg19:Y:6734852-C-CT hg38:Y:6866811-C-CT | 10×T | ** | ||||||
| hg19:Y:6948467-G-A hg38:Y:7080426-G-A | ** | |||||||
| hg19:Y:14463291-CTTTTTT-C hg38:Y:12342564-CTTTTTT-C | 16×T | ** | ||||||
| hg19:Y:18792583-C-A hg38:Y:16680703-C-A | ** | |||||||
| hg19:Y:15177426-C-A hg38:Y:13065512-C-A | ** | |||||||
| hg19:Y:13323796-C-A hg38:Y:11168120-C-A | ** | |||||||
| hg19:Y:15406905-A-C hg38:Y:13295025-A-C | ** | |||||||
| hg19:Y:4302128-C-A hg38:Y:4434087-C-A | ** | |||||||
| hg38:Y:11030123-C-A | ** | |||||||
| hg19:Y:3649053-C-A hg38:Y:3781012-C-A | ** | |||||||
| hg38:Y:11664516-C-A | DYZ17 | ** | ||||||
| hg38:Y:10684602-G-C | ** | |||||||
| hg19:Y:3640470-C-T hg38:Y:3772429-C-T | ** | |||||||
| hg19:Y:5335314-C-A hg38:Y:5467273-C-A | ** | |||||||
| hg19:Y:22317911-T-C hg38:Y:20156025-T-C | DYZ19 | ** | ||||||
| hg19:Y:23046015-C-A hg38:Y:20884129-C-A | ** | |||||||
| hg19:Y:6401640-C-A hg38:Y:6533599-C-A | ** | |||||||
| hg19:Y:15762219-G-T hg38:Y:13650339-G-T | FT160432 | ** | ||||||
| hg38:Y:10849956-G-T | ** | |||||||
| hg19:Y:5796784-G-A hg38:Y:5928743-G-A | ** | |||||||
| hg19:Y:7167743-C-A hg38:Y:7299702-C-A | ** | |||||||
| hg38:Y:10942618-A-G | ** | |||||||
| hg19:Y:22963423-C-A hg38:Y:20801537-C-A | ** | |||||||
| hg19:Y:23476238-C-T hg38:Y:21314352-C-T | ** | |||||||
| hg19:Y:21270930-C-T hg38:Y:19109044-C-T | ** | |||||||
| hg19:Y:5200326-G-T hg38:Y:5332285-G-T | ** | |||||||
| hg19:Y:2693262-G-A hg38:Y:2825221-G-A | ** | |||||||
| hg19:Y:2693264-C-T hg38:Y:2825223-C-T | ** | |||||||
| hg19:Y:2693285-A-G hg38:Y:2825244-A-G | ** | |||||||
| hg19:Y:2790298-C-A hg38:Y:2922257-C-A | ** | |||||||
| hg19:Y:2845780-C-A hg38:Y:2977739-C-A | ** | |||||||
| hg19:Y:3061210-C-A hg38:Y:3193169-C-A | ** | |||||||
| hg19:Y:3111767-G-T hg38:Y:3243726-G-T | ** | |||||||
| hg19:Y:3296186-A-G hg38:Y:3428145-A-G | ** | |||||||
| hg19:Y:3334640-A-G hg38:Y:3466599-A-G | ** | |||||||
| hg19:Y:3374190-T-C hg38:Y:3506149-T-C | ** | |||||||
| hg19:Y:3477693-G-A hg38:Y:3609652-G-A | ** | |||||||
| hg19:Y:3559800-C-A hg38:Y:3691759-C-A | ** | |||||||
| hg19:Y:3800010-T-C hg38:Y:3931969-T-C | ** | |||||||
| hg19:Y:4003732-G-T hg38:Y:4135691-G-T | ** | |||||||
| hg19:Y:4081562-C-A hg38:Y:4213521-C-A | ** | |||||||
| hg19:Y:4311191-G-T hg38:Y:4443150-G-T | ** | |||||||
| hg19:Y:4328937-G-A hg38:Y:4460896-G-A | ** | |||||||
| hg19:Y:4475391-C-A hg38:Y:4607350-C-A | ** | |||||||
| hg19:Y:4561146-C-A hg38:Y:4693105-C-A | ** | |||||||
| hg19:Y:4769425-T-C hg38:Y:4901384-T-C | ** | |||||||
| hg19:Y:4778676-T-A hg38:Y:4910635-T-A | ** | |||||||
| hg19:Y:4919323-C-T hg38:Y:5051282-C-T | BY58431 | ** | ||||||
| hg19:Y:4940312-C-A hg38:Y:5072271-C-A | ** | |||||||
| hg19:Y:5220330-C-A hg38:Y:5352289-C-A | ** | |||||||
| hg19:Y:5318282-A-G hg38:Y:5450241-A-G | ** | |||||||
| hg19:Y:5458670-C-A hg38:Y:5590629-C-A | ** | |||||||
| hg19:Y:5537990-T-A hg38:Y:5669949-T-A | ** | |||||||
| hg19:Y:6354265-G-T hg38:Y:6486224-G-T | ** | |||||||
| hg19:Y:6354347-T-C hg38:Y:6486306-T-C | ** | |||||||
| hg19:Y:6654011-A-T hg38:Y:6785970-A-T | ** | |||||||
| hg19:Y:6752689-G-A hg38:Y:6884648-G-A | ** | |||||||
| hg19:Y:6757736-A-G hg38:Y:6889695-A-G | ** | |||||||
| hg19:Y:6757742-A-G hg38:Y:6889701-A-G | ** | |||||||
| hg19:Y:6757745-T-C hg38:Y:6889704-T-C | ** | |||||||
| hg19:Y:6757752-T-C hg38:Y:6889711-T-C | ** | |||||||
| hg19:Y:6780621-C-T hg38:Y:6912580-C-T | ** | |||||||
| hg19:Y:6816663-C-A hg38:Y:6948622-C-A | ** | |||||||
| hg19:Y:6891951-C-A hg38:Y:7023910-C-A | ** | |||||||
| hg19:Y:6926340-C-A hg38:Y:7058299-C-A | ** | |||||||
| hg19:Y:6934596-A-C hg38:Y:7066555-A-C | ** | |||||||
| hg19:Y:6934626-T-C hg38:Y:7066585-T-C | ** | |||||||
| hg19:Y:6934627-A-G hg38:Y:7066586-A-G | ** | |||||||
| hg19:Y:6948455-C-G hg38:Y:7080414-C-G | FTA9553 | ** | ||||||
| hg19:Y:7015420-C-A hg38:Y:7147379-C-A | ** | |||||||
| hg19:Y:7086769-G-A hg38:Y:7218728-G-A | ** | |||||||
| hg19:Y:7123706-C-A hg38:Y:7255665-C-A | ** | |||||||
| hg19:Y:7127513-C-T hg38:Y:7259472-C-T | ** | |||||||
| hg19:Y:7160974-A-T hg38:Y:7292933-A-T | ** | |||||||
| hg19:Y:7167669-T-C hg38:Y:7299628-T-C | ** | |||||||
| hg19:Y:7167710-C-A hg38:Y:7299669-C-A | ** | |||||||
| hg19:Y:7187843-C-A hg38:Y:7319802-C-A | ** | |||||||
| hg19:Y:7225405-C-A hg38:Y:7357364-C-A | ** | |||||||
| hg19:Y:7225702-C-A hg38:Y:7357661-C-A | ** | |||||||
| hg19:Y:7261176-C-A hg38:Y:7393135-C-A | ** | |||||||
| hg19:Y:7304679-A-G hg38:Y:7436638-A-G | ** | |||||||
| hg19:Y:7340342-G-T hg38:Y:7472301-G-T | ** | |||||||
| hg19:Y:7416634-C-A hg38:Y:7548593-C-A | ** | |||||||
| hg19:Y:7418404-C-A hg38:Y:7550363-C-A | ** | |||||||
| hg19:Y:7432351-C-A hg38:Y:7564310-C-A | ** | |||||||
| hg19:Y:7505980-C-A hg38:Y:7637939-C-A | IR1_L | ** | ||||||
| hg19:Y:7782959-C-A hg38:Y:7914918-C-A | ** | |||||||
| hg19:Y:7866667-A-G hg38:Y:7998626-A-G | ** | |||||||
| hg19:Y:7968263-A-T hg38:Y:8100222-A-T | ** | |||||||
| hg19:Y:8654018-C-G hg38:Y:8785977-C-G | ** | |||||||
| hg19:Y:8654019-A-G hg38:Y:8785978-A-G | FT40850 | ** | ||||||
| hg19:Y:8654026-A-G hg38:Y:8785985-A-G | ** | |||||||
| hg19:Y:8658313-G-A hg38:Y:8790272-G-A | ** | |||||||
| hg19:Y:8698087-C-A hg38:Y:8830046-C-A | ** | |||||||
| hg19:Y:8746333-C-A hg38:Y:8878292-C-A | ** | |||||||
| hg19:Y:8842401-T-A hg38:Y:8974360-T-A | ** | |||||||
| hg19:Y:9451313-A-G hg38:Y:9613704-A-G | ** | |||||||
| hg19:Y:9498762-C-A hg38:Y:9661153-C-A | ** | |||||||
| hg19:Y:9666638-A-G hg38:Y:9829029-A-G | IR3_Prx | ** | ||||||
| hg19:Y:9849818-C-A hg38:Y:10012209-C-A | ** | |||||||
| hg19:Y:9859187-C-A hg38:Y:10021578-C-A | ** | |||||||
| hg19:Y:9983351-T-C hg38:Y:10145742-T-C | ** | |||||||
| hg19:Y:10034121-C-T hg38:Y:10196512-C-T | ** | |||||||
| hg38:Y:10630625-A-T | ** | |||||||
| hg38:Y:10655685-C-A | ** | |||||||
| hg38:Y:10655687-C-A | ** | |||||||
| hg38:Y:10660870-C-A | ** | |||||||
| hg38:Y:10673073-A-C | ** | |||||||
| hg38:Y:10676953-G-T | ** | |||||||
| hg38:Y:10771021-C-A | ** | |||||||
| hg38:Y:10785178-C-T | ** | |||||||
| hg38:Y:10785935-T-A | ** | |||||||
| hg38:Y:10789294-T-C | ** | |||||||
| hg38:Y:10797110-G-T | ** | |||||||
| hg38:Y:10826824-T-C | ** | |||||||
| hg38:Y:10828202-C-A | ** | |||||||
| hg38:Y:10838086-C-T | ** | |||||||
| hg38:Y:10839256-C-A | ** | |||||||
| hg38:Y:10851112-C-A | ** | |||||||
| hg38:Y:10861333-T-C | ** | |||||||
| hg38:Y:10861487-C-A | ** | |||||||
| hg38:Y:10865788-C-A | ** | |||||||
| hg38:Y:10868613-G-A | FT60452 | ** | ||||||
| hg38:Y:10868616-T-C | ** | |||||||
| hg38:Y:10868628-T-A | ** | |||||||
| hg38:Y:10868629-C-T | ** | |||||||
| hg38:Y:10868638-T-A | ** | |||||||
| hg38:Y:10868643-T-A | ** | |||||||
| hg38:Y:10868649-C-T | ** | |||||||
| hg38:Y:10868654-C-T | ** | |||||||
| hg38:Y:10870057-C-A | ** | |||||||
| hg38:Y:10875733-C-A | ** | |||||||
| hg38:Y:10884976-C-A | ** | |||||||
| hg38:Y:10896266-C-A | ** | |||||||
| hg38:Y:10900839-C-A | ** | |||||||
| hg38:Y:10927399-T-TTACTC | ** | |||||||
| hg38:Y:10941445-T-A | ** | |||||||
| hg38:Y:10946020-A-T | ** | |||||||
| hg38:Y:10946602-T-G | ** | |||||||
| hg38:Y:10959118-T-C | ** | |||||||
| hg38:Y:10965248-C-T | ** | |||||||
| hg38:Y:10965252-T-G | ** | |||||||
| hg38:Y:10973915-T-A | ** | |||||||
| hg38:Y:10978596-C-A | ** | |||||||
| hg38:Y:10997670-G-T | ** | |||||||
| hg38:Y:11025314-G-T | ** | |||||||
| hg19:Y:13291558-T-C hg38:Y:11135882-T-C | ** | |||||||
| hg19:Y:13311059-C-A hg38:Y:11155383-C-A | ** | |||||||
| hg19:Y:13445937-C-A hg38:Y:11290261-C-A | ** | |||||||
| hg19:Y:13461689-A-T hg38:Y:11306013-A-T | ** | |||||||
| hg19:Y:13605809-C-T hg38:Y:11450133-C-T | ** | |||||||
| hg38:Y:11666094-A-G | DYZ17 | ** | ||||||
| hg19:Y:13855977-A-T hg38:Y:11735271-A-T | DYZ17 | ** | ||||||
| hg19:Y:13856000-A-G hg38:Y:11735294-A-G | DYZ17 | ** | ||||||
| hg19:Y:13856010-G-C hg38:Y:11735304-G-C | DYZ17 | ** | ||||||
| hg19:Y:13856023-T-C hg38:Y:11735317-T-C | DYZ17 | ** | ||||||
| hg19:Y:13856024-G-T hg38:Y:11735318-G-T | DYZ17 | ** | ||||||
| hg19:Y:14013741-G-T hg38:Y:11893035-G-T | ** | |||||||
| hg19:Y:14065680-C-A hg38:Y:11944974-C-A | ** | |||||||
| hg19:Y:14088884-A-G hg38:Y:11968178-A-G | ** | |||||||
| hg19:Y:14101057-C-A hg38:Y:11980351-C-A | ** | |||||||
| hg19:Y:14180993-C-A hg38:Y:12060287-C-A | ** | |||||||
| hg19:Y:14238574-A-G hg38:Y:12117868-A-G | ** | |||||||
| hg19:Y:14278569-G-T hg38:Y:12157863-G-T | ** | |||||||
| hg19:Y:14295165-T-C hg38:Y:12174459-T-C | ** | |||||||
| hg19:Y:14352880-C-A hg38:Y:12232175-C-A | ** | |||||||
| hg19:Y:14451107-G-T hg38:Y:12330380-G-T | ** | |||||||
| hg19:Y:14473746-A-T hg38:Y:12353015-A-T | ** | |||||||
| hg19:Y:14516977-C-A hg38:Y:12405178-C-A | ** | |||||||
| hg19:Y:14550086-C-A hg38:Y:12438287-C-A | ** | |||||||
| hg19:Y:14718125-A-G hg38:Y:12606193-A-G | ** | |||||||
| hg19:Y:14760878-A-G hg38:Y:12648947-A-G | FT65137 | ** | ||||||
| hg19:Y:14789421-A-G hg38:Y:12677492-A-G | ** | |||||||
| hg19:Y:14805984-C-A hg38:Y:12694055-C-A | ** | |||||||
| hg19:Y:14845406-C-A hg38:Y:12733472-C-A | ** | |||||||
| hg19:Y:14846927-C-A hg38:Y:12734993-C-A | ** | |||||||
| hg19:Y:14912885-T-A hg38:Y:12800952-T-A | ** | |||||||
| hg19:Y:14938650-G-GAA hg38:Y:12826724-G-GAA | ** | |||||||
| hg19:Y:15151534-A-G hg38:Y:13039621-A-G | ** | |||||||
| hg19:Y:15218616-TA-T hg38:Y:13106702-TA-T | ** | |||||||
| hg19:Y:15231042-C-A hg38:Y:13119128-C-A | ** | |||||||
| hg19:Y:15235462-A-G hg38:Y:13123548-A-G | ** | |||||||
| hg19:Y:15235482-T-G hg38:Y:13123568-T-G | ** | |||||||
| hg19:Y:15235487-TTTTTTTC-T hg38:Y:13123573-TTTTTTTC-T | ** | |||||||
| hg19:Y:15235515-A-G hg38:Y:13123601-A-G | ** | |||||||
| hg19:Y:15276841-C-T hg38:Y:13164930-C-T | ** | |||||||
| hg19:Y:15397251-G-A hg38:Y:13285371-G-A | ** | |||||||
| hg19:Y:15412836-C-A hg38:Y:13300956-C-A | ** | |||||||
| hg19:Y:15556040-C-A hg38:Y:13444160-C-A | ** | |||||||
| hg19:Y:15620266-A-G hg38:Y:13508386-A-G | ** | |||||||
| hg19:Y:15697071-C-A hg38:Y:13585191-C-A | ** | |||||||
| hg19:Y:15862524-G-A hg38:Y:13750644-G-A | ** | |||||||
| hg19:Y:15894658-AGG-A hg38:Y:13782778-AGG-A | ** | |||||||
| hg19:Y:15943036-C-T hg38:Y:13831156-C-T | ** | |||||||
| hg19:Y:15967504-T-C hg38:Y:13855624-T-C | ** | |||||||
| hg19:Y:16022641-AC-A hg38:Y:13910761-AC-A | ** | |||||||
| hg19:Y:16027799-C-A hg38:Y:13915919-C-A | ** | |||||||
| hg19:Y:16410167-C-A hg38:Y:14298287-C-A | ** | |||||||
| hg19:Y:16421307-T-C hg38:Y:14309427-T-C | ** | |||||||
| hg19:Y:16645860-C-A hg38:Y:14533980-C-A | ** | |||||||
| hg19:Y:16676034-T-C hg38:Y:14564154-T-C | ** | |||||||
| hg19:Y:16676044-C-T hg38:Y:14564164-C-T | ** | |||||||
| hg19:Y:16676047-C-G hg38:Y:14564167-C-G | ** | |||||||
| hg19:Y:16676051-A-G hg38:Y:14564171-A-G | ** | |||||||
| hg19:Y:16676056-A-T hg38:Y:14564176-A-T | ** | |||||||
| hg19:Y:17014652-T-C hg38:Y:14902772-T-C | ** | |||||||
| hg19:Y:17042723-C-A hg38:Y:14930843-C-A | ** | |||||||
| hg19:Y:17071222-G-T hg38:Y:14959342-G-T | ** | |||||||
| hg19:Y:17225904-G-A hg38:Y:15114024-G-A | ** | |||||||
| hg19:Y:17327372-C-A hg38:Y:15215492-C-A | ** | |||||||
| hg19:Y:17372194-C-A hg38:Y:15260314-C-A | ** | |||||||
| hg19:Y:17638234-T-C hg38:Y:15526354-T-C | ** | |||||||
| hg19:Y:17699763-CT-C hg38:Y:15587883-CT-C | ** | |||||||
| hg19:Y:17728721-C-A hg38:Y:15616841-C-A | ** | |||||||
| hg19:Y:17802194-A-AG hg38:Y:15690314-A-AG | 8×AAG | ** | ||||||
| hg19:Y:17812052-C-A hg38:Y:15700172-C-A | ** | |||||||
| hg19:Y:17857934-T-A hg38:Y:15746054-T-A | ** | |||||||
| hg19:Y:18060322-ATATATGTACAT-A hg38:Y:15948442-ATATATGTACAT-A | ** | |||||||
| hg19:Y:18080588-T-G hg38:Y:15968708-T-G | ** | |||||||
| hg19:Y:18249912-G-T hg38:Y:16138032-G-T | ** | |||||||
| hg19:Y:18401054-C-G hg38:Y:16289174-C-G | P6_Gap | ** | ||||||
| hg19:Y:18406994-A-G hg38:Y:16295114-A-G | P6_Gap | ** | ||||||
| hg19:Y:18605290-C-A hg38:Y:16493410-C-A | ** | |||||||
| hg19:Y:18692691-T-C hg38:Y:16580811-T-C | ** | |||||||
| hg19:Y:18693650-T-A hg38:Y:16581770-T-A | ** | |||||||
| hg19:Y:18756091-C-A hg38:Y:16644211-C-A | ** | |||||||
| hg19:Y:18810837-A-T hg38:Y:16698957-A-T | ** | |||||||
| hg19:Y:18869194-C-A hg38:Y:16757314-C-A | ** | |||||||
| hg19:Y:19043552-T-C hg38:Y:16931672-T-C | ** | |||||||
| hg19:Y:19043569-G-A hg38:Y:16931689-G-A | ** | |||||||
| hg19:Y:19043574-A-G hg38:Y:16931694-A-G | ** | |||||||
| hg19:Y:19044419-C-A hg38:Y:16932539-C-A | ** | |||||||
| hg19:Y:19073743-G-T hg38:Y:16961863-G-T | ** | |||||||
| hg19:Y:19155028-C-T hg38:Y:17043148-C-T | ** | |||||||
| hg19:Y:19271441-A-G hg38:Y:17159561-A-G | FT149757 | ** | ||||||
| hg19:Y:19271541-C-A hg38:Y:17159661-C-A | ** | |||||||
| hg19:Y:19340551-C-A hg38:Y:17228671-C-A | ** | |||||||
| hg19:Y:19356576-G-A hg38:Y:17244696-G-A | ** | |||||||
| hg19:Y:19415616-C-A hg38:Y:17303736-C-A | ** | |||||||
| hg19:Y:19486917-A-G hg38:Y:17375037-A-G | ** | |||||||
| hg19:Y:19530377-C-A hg38:Y:17418497-C-A | ** | |||||||
| hg19:Y:19610390-G-A hg38:Y:17498510-G-A | P5_Prx | ** | ||||||
| hg19:Y:19754939-T-C hg38:Y:17643059-T-C | P5_Prx | ** | ||||||
| hg19:Y:19926973-TTTTTTG-T hg38:Y:17815093-TTTTTTG-T | P5_Prx | ** | ||||||
| hg19:Y:20332077-TG-T hg38:Y:18170191-TG-T | P5_Dst | ** | ||||||
| hg19:Y:20570290-C-A hg38:Y:18408404-C-A | P5_Dst | ** | ||||||
| hg19:Y:20579120-ATATAT-A hg38:Y:18417234-ATATAT-A | P5_Dst | ** | ||||||
| hg19:Y:20707581-G-A hg38:Y:18545695-G-A | P4_Prx | ** | ||||||
| hg19:Y:20839529-C-T hg38:Y:18677643-C-T | P4_Gap | ** | ||||||
| hg19:Y:21002537-C-CTTTT hg38:Y:18840651-C-CTTTT | P4_Dst | ** | ||||||
| hg19:Y:21002540-T-TG hg38:Y:18840654-T-TG | P4_Dst | ** | ||||||
| hg19:Y:21002541-C-CG hg38:Y:18840655-C-CG | P4_Dst | ** | ||||||
| hg19:Y:21002549-C-G hg38:Y:18840663-C-G | P4_Dst | ** | ||||||
| hg19:Y:21135121-C-T hg38:Y:18973235-C-T | F23926 | ** | ||||||
| hg19:Y:21187272-G-A hg38:Y:19025386-G-A | ** | |||||||
| hg19:Y:21208930-C-A hg38:Y:19047044-C-A | ** | |||||||
| hg19:Y:21270914-G-A hg38:Y:19109028-G-A | FGC42821 | ** | ||||||
| hg19:Y:21323219-A-AAT hg38:Y:19161333-A-AAT | ** | |||||||
| hg19:Y:21323229-A-C hg38:Y:19161343-A-C | ** | |||||||
| hg19:Y:21323232-C-CAG hg38:Y:19161346-C-CAG | ** | |||||||
| hg19:Y:21371711-C-A hg38:Y:19209825-C-A | ** | |||||||
| hg19:Y:21393458-C-A hg38:Y:19231572-C-A | ** | |||||||
| hg19:Y:21498979-T-C hg38:Y:19337093-T-C | ** | |||||||
| hg19:Y:21555460-C-A hg38:Y:19393574-C-A | ** | |||||||
| hg19:Y:21584463-T-C hg38:Y:19422577-T-C | ** | |||||||
| hg19:Y:22050654-C-A hg38:Y:19888768-C-A | ** | |||||||
| hg19:Y:22100798-G-A hg38:Y:19938912-G-A | ** | |||||||
| hg19:Y:22123117-C-A hg38:Y:19961231-C-A | ** | |||||||
| hg19:Y:22317897-G-A hg38:Y:20156011-G-A | DYZ19 | ** | ||||||
| hg19:Y:22662031-C-A hg38:Y:20500145-C-A | ** | |||||||
| hg19:Y:22774890-TC-T hg38:Y:20613004-TC-T | ** | |||||||
| hg19:Y:22804047-G-A hg38:Y:20642161-G-A | Y38050 | ** | ||||||
| hg19:Y:22851372-T-C hg38:Y:20689486-T-C | ** | |||||||
| hg19:Y:23009830-C-A hg38:Y:20847944-C-A | ** | |||||||
| hg19:Y:23386391-T-C hg38:Y:21224505-T-C | ** | |||||||
| hg19:Y:23475385-A-T hg38:Y:21313499-A-T | ** | |||||||
| hg19:Y:23819076-C-A hg38:Y:21657190-C-A | ** | |||||||
| hg19:Y:23952586-T-A hg38:Y:21806439-T-A | ** | |||||||
| hg19:Y:24071628-G-A hg38:Y:21925481-G-A | P3_b1 | ** | ||||||
| hg19:Y:24373159-C-A hg38:Y:22227012-C-A | ** | |||||||
| hg19:Y:25571907-C-A hg38:Y:23425760-C-A | P1_gr1 | ** | ||||||
| hg19:Y:27447486-G-GTA hg38:Y:25301339-G-GTA | P1_Y2 | ** | ||||||
| hg19:Y:28526324-C-A hg38:Y:26380177-C-A | ** | |||||||
| hg19:Y:28549680-G-T hg38:Y:26403533-G-T | ** | |||||||
| hg19:Y:28776797-C-A hg38:Y:26630650-C-A | ** | |||||||
| hg19:Y:28780213-T-C hg38:Y:26634066-T-C | ** | |||||||
| hg19:Y:28780214-C-T hg38:Y:26634067-C-T | ** | |||||||
| hg19:Y:28780223-A-G hg38:Y:26634076-A-G | ** | |||||||
| hg19:Y:28780236-CGTG-C hg38:Y:26634089-CGTG-C | ** | |||||||
| hg19:Y:28780241-A-C hg38:Y:26634094-A-C | ** | |||||||
| hg38:Y:56838855-G-T | ** | |||||||
| hg38:Y:56840160-G-T | ** | |||||||
| hg38:Y:56843703-G-T | ** | |||||||
| hg19:Y:58981634-ACTTCC-A,ACTCCCCTCCA hg38:Y:56835487-ACTTCC-A,ACTCCCCTCCA | *** | |||||||
| hg19:Y:22253044-T-C hg38:Y:20091158-T-C | DYZ19 | *** | ||||||
| hg19:Y:7022150-A-T hg38:Y:7154109-A-T | *** | |||||||
| hg19:Y:19319916-C-A hg38:Y:17208036-C-A | *** | |||||||
| hg19:Y:26509282-C-T hg38:Y:24363135-C-T | P1_Y1 | *** | ||||||
| hg19:Y:14807370-T-C hg38:Y:12695441-T-C | *** | |||||||
| hg19:Y:7447270-T-C hg38:Y:7579229-T-C | IR1_L | *** | ||||||
| hg19:Y:13743908-C-T hg38:Y:11588232-C-T | DYZ17 | *** | ||||||
| hg19:Y:22359108-A-T hg38:Y:20197222-A-T | DYZ19 | *** | ||||||
| hg19:Y:24205205-A-G hg38:Y:22059058-A-G | P3_b1 | *** | ||||||
| hg19:Y:24814036-A-C hg38:Y:22667889-A-C | P3_b2 | *** | ||||||
| hg19:Y:26891505-G-A hg38:Y:24745358-G-A | P1_r3 | *** | ||||||
| hg19:Y:21690909-CAA-C,CA hg38:Y:19529023-CAA-C,CA | 14×A | *** | ||||||
| hg38:Y:10869991-C-A | *** | |||||||
| hg19:Y:8550844-TAA-T,TAAA hg38:Y:8682803-TAA-T,TAAA | 17×A | *** | ||||||
| hg19:Y:21262546-C-A hg38:Y:19100660-C-A | *** | |||||||
| hg19:Y:24242331-CAA-C hg38:Y:22096184-CAA-C | P3_b1 | 16×A | *** | |||||
| hg19:Y:7765626-C-A hg38:Y:7897585-C-A | *** | |||||||
| hg19:Y:19411175-TAA-T,TA hg38:Y:17299295-TAA-T,TA | 13×A | *** | ||||||
| hg19:Y:15161292-GAAAAAA-G hg38:Y:13049378-GAAAAAA-G | 22×A | *** | ||||||
| hg19:Y:3961365-C-A hg38:Y:4093324-C-A | *** | |||||||
| hg38:Y:10787362-C-A | *** | |||||||
| hg19:Y:13488849-C-A,T hg38:Y:11333173-C-A,T | *** | |||||||
| hg38:Y:12631481-CTTT-C,CT | 13×T | *** | ||||||
| hg19:Y:9074035-C-A hg38:Y:9236426-C-A | *** | |||||||
| hg19:Y:21953534-C-A hg38:Y:19791648-C-A | *** | |||||||
| hg19:Y:2707023-A-C hg38:Y:2838982-A-C | *** | |||||||
| hg19:Y:2894606-C-A hg38:Y:3026565-C-A | *** | |||||||
| hg19:Y:3274387-A-T hg38:Y:3406346-A-T | *** | |||||||
| hg19:Y:5274692-C-A hg38:Y:5406651-C-A | *** | |||||||
| hg19:Y:5625670-C-A hg38:Y:5757629-C-A | *** | |||||||
| hg19:Y:6759245-C-A hg38:Y:6891204-C-A | *** | |||||||
| hg19:Y:6925068-T-A hg38:Y:7057027-T-A | *** | |||||||
| hg19:Y:8690674-C-A hg38:Y:8822633-C-A | *** | |||||||
| hg19:Y:8978469-GAA-G,GA hg38:Y:9140860-GAA-G,GA | 13×A | *** | ||||||
| hg38:Y:10689828-T-C | *** | |||||||
| hg38:Y:10692109-C-A | *** | |||||||
| hg38:Y:10869964-T-G | *** | |||||||
| hg38:Y:10887268-C-A | *** | |||||||
| hg38:Y:10912089-T-C | *** | |||||||
| hg38:Y:10912448-G-T | *** | |||||||
| hg38:Y:10924391-TTAT-T,TCAG | *** | |||||||
| hg38:Y:10982290-T-C | *** | |||||||
| hg38:Y:10999855-A-G | *** | |||||||
| hg38:Y:11021596-C-T | *** | |||||||
| hg19:Y:13320288-C-A hg38:Y:11164612-C-A | *** | |||||||
| hg38:Y:11677600-C-A | DYZ17 | *** | ||||||
| hg19:Y:14212020-C-A hg38:Y:12091314-C-A | *** | |||||||
| hg19:Y:14247651-T-A hg38:Y:12126945-T-A | *** | |||||||
| hg19:Y:14933946-C-T hg38:Y:12822011-C-T | *** | |||||||
| hg19:Y:15325211-C-A hg38:Y:13213329-C-A | *** | |||||||
| hg38:Y:13228501-CTTT-C,CTTTT | 19×T | *** | ||||||
| hg19:Y:16246057-T-C hg38:Y:14134177-T-C | *** | |||||||
| hg19:Y:17323745-G-T hg38:Y:15211865-G-T | *** | |||||||
| hg19:Y:17374772-C-A hg38:Y:15262892-C-A | *** | |||||||
| hg19:Y:17386734-C-A hg38:Y:15274854-C-A | *** | |||||||
| hg19:Y:17895157-C-A hg38:Y:15783277-C-A | *** | |||||||
| hg19:Y:18098820-G-A hg38:Y:15986940-G-A | *** | |||||||
| hg19:Y:18915343-A-T hg38:Y:16803463-A-T | *** | |||||||
| hg19:Y:19095179-A-C hg38:Y:16983299-A-C | *** | |||||||
| hg19:Y:19415834-C-A hg38:Y:17303954-C-A | *** | |||||||
| hg19:Y:22961941-T-C hg38:Y:20800055-T-C | *** | |||||||
| hg19:Y:23577176-A-T hg38:Y:21415290-A-T | *** | |||||||
| hg19:Y:24210555-G-T hg38:Y:22064408-G-T | P3_b1 | *** | ||||||
| hg19:Y:28479852-C-T hg38:Y:26333705-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 25841 | 10575136 | 7637586 | 7708545 |
| Kit: 25841 | 9562500 | 7783451 | 7679965 |
| Used in age calculations | 10575136 | 7783451 | 7708545 |
| Counts of SNPs | 4 | 4 |
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