Breen
FTDNA: N6856, BigY3: N6856, BigY2: N6856MDKA Birth:
IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA N6856 | BigY3 N6856 | BigY2 N6856 |
|---|---|---|---|---|---|---|---|---|---|
| hg19:Y:20038228-C-T hg38:Y:17926348-C-T | P5_Prx | *** | A* | A* | |||||
| hg19:Y:25875137-G-T hg38:Y:23728990-G-T | P1_Y1 | *** | A* | A* | |||||
| hg19:Y:26085088-A-G hg38:Y:23938941-A-G | P1_Y1 | *** | A* | A* | |||||
| hg19:Y:25964815-T-C hg38:Y:23818668-T-C | P1_Y1 | ** | A* | ||||||
| hg38:Y:10949574-A-T | A* | ||||||||
| hg19:Y:13449460-G-T hg38:Y:11293784-G-T | A* | ||||||||
| hg38:Y:56831621-C-A | A* | ||||||||
| hg19:Y:9146879-T-G hg38:Y:9309270-T-G | BY19228 | Y5951 Z20907 | Y | + | + | + | |||
| hg19:Y:21464187-GGAAAGAAA-G hg38:Y:19302301-GGAAAGAAA-G | 12×GAAA | + | + | ** | |||||
| hg19:Y:6941885-A-C hg38:Y:7073844-A-C | BY17690 | Y | Y | + | + | + | |||
| hg19:Y:7516515-T-C hg38:Y:7648474-T-C | A13320 | Y | + | + | + | ||||
| hg19:Y:13827645-T-C hg38:Y:11706939-T-C | BY90778 | DYZ17 | + | + | + | ||||
| hg19:Y:14184903-G-C hg38:Y:12064197-G-C | BY93622 | Y | Y | + | + | + | |||
| hg19:Y:15051143-A-C hg38:Y:12939234-A-C | BY45737 | Y | Y | + | + | + | |||
| hg19:Y:15481847-T-C hg38:Y:13369967-T-C | BY101874 | Y | Y | + | + | + | |||
| hg19:Y:18890295-T-G hg38:Y:16778415-T-G | BY124550 | Y | Y | + | + | + | |||
| hg19:Y:22438760-A-T hg38:Y:20276874-A-T | BY218573 | DYZ19 | + | + | |||||
| hg19:Y:22489304-G-T hg38:Y:20327418-G-T | DYZ19 | + | ** | ||||||
| hg19:Y:22489348-T-C hg38:Y:20327462-T-C | DYZ19 | + | |||||||
| hg19:Y:23486731-G-T hg38:Y:21324845-G-T | BY145671 | Y | Y | + | + | + | |||
| hg19:Y:14149435-G-T hg38:Y:12028729-G-T | FT104919 | Y | Y | + | ** | ||||
| hg19:Y:23603301-A-G hg38:Y:21441415-A-G | FT106312 | Y | Y | + | ** | ||||
| hg19:Y:23465529-G-T hg38:Y:21303643-G-T | FT106292 | Y | + | ||||||
| hg19:Y:4187209-G-A hg38:Y:4319168-G-A | FT38899 | + | |||||||
| hg19:Y:4198893-T-C hg38:Y:4330852-T-C | FT103795 | + | |||||||
| hg19:Y:17502177-G-T hg38:Y:15390297-G-T | FT105492 | Y | + | ||||||
| hg19:Y:17886278-T-C hg38:Y:15774398-T-C | FT105565 | Y | + | ||||||
| hg19:Y:19386029-T-A hg38:Y:17274149-T-A | FT105842 | Y | + | ||||||
| hg19:Y:22241323-C-T hg38:Y:20079437-C-T | DYZ19 | *** | * | ||||||
| hg19:Y:26100572-G-A hg38:Y:23954425-G-A | P1_Y1 | ** | |||||||
| hg19:Y:15248160-A-G hg38:Y:13136246-A-G | ** | ** | |||||||
| hg19:Y:21268104-G-A hg38:Y:19106218-G-A | FT298315 | ** | |||||||
| hg19:Y:22489293-C-A hg38:Y:20327407-C-A | DYZ19 | ** | ** | ||||||
| hg19:Y:22489296-T-C hg38:Y:20327410-T-C | DYZ19 | ** | ** | ||||||
| hg19:Y:22489297-A-C hg38:Y:20327411-A-C | DYZ19 | ** | ** | ||||||
| hg19:Y:16938218-CTTTTTTT-C hg38:Y:14826338-CTTTTTTT-C | 19×T | ** | |||||||
| hg19:Y:9942350-C-A hg38:Y:10104741-C-A | ** | ||||||||
| hg19:Y:8389620-G-T hg38:Y:8521579-G-T | ** | ||||||||
| hg19:Y:8678072-C-A hg38:Y:8810031-C-A | ** | ||||||||
| hg19:Y:3836352-C-A hg38:Y:3968311-C-A | ** | ||||||||
| hg38:Y:10940322-A-C | ** | ||||||||
| hg19:Y:21409448-C-A hg38:Y:19247562-C-A | ** | ||||||||
| hg38:Y:10968498-C-A | ** | ||||||||
| hg19:Y:9960029-C-A hg38:Y:10122420-C-A | ** | ||||||||
| hg19:Y:16279027-C-A hg38:Y:14167147-C-A | ** | ||||||||
| hg19:Y:28814913-A-G hg38:Y:26668766-A-G | ** | ||||||||
| hg19:Y:28814918-G-A hg38:Y:26668771-G-A | ** | ||||||||
| hg19:Y:28814919-G-A hg38:Y:26668772-G-A | ** | ||||||||
| hg19:Y:28814922-G-T hg38:Y:26668775-G-T | ** | ||||||||
| hg19:Y:28814937-C-T hg38:Y:26668790-C-T | ** | ||||||||
| hg19:Y:28814938-A-G hg38:Y:26668791-A-G | ** | ||||||||
| hg19:Y:13883051-C-A hg38:Y:11762345-C-A | ** | ||||||||
| hg19:Y:13258774-C-A hg38:Y:11103098-C-A | ** | ||||||||
| hg19:Y:18518317-A-T hg38:Y:16406437-A-T | P6_Dst | ** | |||||||
| hg19:Y:28814934-G-C hg38:Y:26668787-G-C | ** | ||||||||
| hg19:Y:24407310-C-A hg38:Y:22261163-C-A | ** | ||||||||
| hg19:Y:17426921-C-A hg38:Y:15315041-C-A | ** | ||||||||
| hg19:Y:21488712-C-A hg38:Y:19326826-C-A | ** | ||||||||
| hg38:Y2:24482-A-T | ** | ||||||||
| hg19:Y:15109185-C-A hg38:Y:12997272-C-A | ** | ||||||||
| hg19:Y:17385472-C-A hg38:Y:15273592-C-A | ** | ||||||||
| hg19:Y:16932025-C-A hg38:Y:14820145-C-A | ** | ||||||||
| hg19:Y:22659579-C-A hg38:Y:20497693-C-A | ** | ||||||||
| hg19:Y:23838837-C-A hg38:Y:21676951-C-A | ** | ||||||||
| hg19:Y:9936779-C-A hg38:Y:10099170-C-A | ** | ||||||||
| hg19:Y:16830957-C-A hg38:Y:14719077-C-A | ** | ||||||||
| hg19:Y:19706199-T-C hg38:Y:17594319-T-C | P5_Prx | ** | |||||||
| hg19:Y:14294108-A-G hg38:Y:12173402-A-G | ** | ||||||||
| hg19:Y:15732975-C-A hg38:Y:13621095-C-A | ** | ||||||||
| hg19:Y:16786205-A-T hg38:Y:14674325-A-T | ** | ||||||||
| hg19:Y:17950823-C-A hg38:Y:15838943-C-A | ** | ||||||||
| hg19:Y:16266171-C-A hg38:Y:14154291-C-A | ** | ||||||||
| hg19:Y:7613833-G-GA hg38:Y:7745792-G-GA | 31×A | ** | |||||||
| hg19:Y:6491359-C-A hg38:Y:6623318-C-A | ** | ||||||||
| hg19:Y:24112763-C-A hg38:Y:21966616-C-A | P3_b1 | ** | |||||||
| hg19:Y:19558921-G-T hg38:Y:17447041-G-T | ** | ||||||||
| hg19:Y:6757224-C-A hg38:Y:6889183-C-A | ** | ||||||||
| hg19:Y:19831752-A-AG hg38:Y:17719872-A-AG | P5_Prx | ** | |||||||
| hg19:Y:16848505-C-A hg38:Y:14736625-C-A | ** | ||||||||
| hg38:Y:10821878-A-T | ** | ||||||||
| hg19:Y:21457425-G-T hg38:Y:19295539-G-T | ** | ||||||||
| hg19:Y:14519520-C-A hg38:Y:12407721-C-A | ** | ||||||||
| hg19:Y:17605479-C-A hg38:Y:15493599-C-A | ** | ||||||||
| hg19:Y:7438086-CT-C hg38:Y:7570045-CT-C | 8×T | ** | |||||||
| hg19:Y:2790263-C-A hg38:Y:2922222-C-A | ** | ||||||||
| hg19:Y:8914851-A-G hg38:Y:9046810-A-G | ** | ||||||||
| hg19:Y:18937520-C-A hg38:Y:16825640-C-A | ** | ||||||||
| hg19:Y:9082199-C-A hg38:Y:9244590-C-A | ** | ||||||||
| hg19:Y:19498093-C-A hg38:Y:17386213-C-A | ** | ||||||||
| hg19:Y:22662057-C-A hg38:Y:20500171-C-A | ** | ||||||||
| hg19:Y:16005504-C-A hg38:Y:13893624-C-A | ** | ||||||||
| hg19:Y:4112992-C-A hg38:Y:4244951-C-A | ** | ||||||||
| hg19:Y:7015223-C-A hg38:Y:7147182-C-A | ** | ||||||||
| hg19:Y:15392247-C-A hg38:Y:13280367-C-A | FT168917 | ** | |||||||
| hg19:Y:18930524-C-A hg38:Y:16818644-C-A | ** | ||||||||
| hg19:Y:19272140-C-A hg38:Y:17160260-C-A | ** | ||||||||
| hg19:Y:13602630-C-A hg38:Y:11446954-C-A | ** | ||||||||
| hg19:Y:3759161-C-A hg38:Y:3891120-C-A | ** | ||||||||
| hg19:Y:13973233-C-A hg38:Y:11852527-C-A | ** | ||||||||
| hg19:Y:14355077-G-A hg38:Y:12234372-G-A | ** | ||||||||
| hg38:Y:56849100-G-T | ** | ||||||||
| hg19:Y:3440363-C-A hg38:Y:3572322-C-A | ** | ||||||||
| hg19:Y:19412564-C-A hg38:Y:17300684-C-A | ** | ||||||||
| hg38:Y:10880266-C-A | ** | ||||||||
| hg19:Y:8153903-G-A hg38:Y:8285862-G-A | ** | ||||||||
| hg19:Y:3272542-C-A hg38:Y:3404501-C-A | ** | ||||||||
| hg19:Y:21132681-GTTTTTT-G hg38:Y:18970795-GTTTTTT-G | 18×T | ** | |||||||
| hg19:Y:3875965-C-A hg38:Y:4007924-C-A | ** | ||||||||
| hg19:Y:23459746-C-A hg38:Y:21297860-C-A | ** | ||||||||
| hg19:Y:13890694-C-A hg38:Y:11769988-C-A | ** | ||||||||
| hg19:Y:15394463-C-A hg38:Y:13282583-C-A | ** | ||||||||
| hg19:Y:18955744-C-A hg38:Y:16843864-C-A | ** | ||||||||
| hg19:Y:21127388-C-A hg38:Y:18965502-C-A | ** | ||||||||
| hg19:Y:7832159-CTTT-C hg38:Y:7964118-CTTT-C | ** | ||||||||
| hg38:Y:10669379-C-T | ** | ||||||||
| hg19:Y:5190897-C-A hg38:Y:5322856-C-A | ** | ||||||||
| hg19:Y:16700225-C-A hg38:Y:14588345-C-A | ** | ||||||||
| hg19:Y:18687530-G-C hg38:Y:16575650-G-C | ** | ||||||||
| hg38:Y:11038142-C-A | ** | ||||||||
| hg19:Y:17380656-C-A hg38:Y:15268776-C-A | ** | ||||||||
| hg19:Y:19586696-T-TC hg38:Y:17474816-T-TC | P5_Prx | ** | |||||||
| hg38:Y:10669424-C-A | ** | ||||||||
| hg38:Y:11026496-C-A | ** | ||||||||
| hg19:Y:3331025-C-A hg38:Y:3462984-C-A | ** | ||||||||
| hg19:Y:4582406-C-A hg38:Y:4714365-C-A | ** | ||||||||
| hg38:Y:10906865-C-A | ** | ||||||||
| hg19:Y:4049122-C-A hg38:Y:4181081-C-A | ** | ||||||||
| hg19:Y:23207005-C-A hg38:Y:21045119-C-A | ** | ||||||||
| hg19:Y:16044740-C-A hg38:Y:13932860-C-A | ** | ||||||||
| hg19:Y:17499069-C-A hg38:Y:15387189-C-A | ** | ||||||||
| hg19:Y:18101595-C-A hg38:Y:15989715-C-A | ** | ||||||||
| hg38:Y:10806645-C-A | ** | ||||||||
| hg19:Y:5200229-C-A hg38:Y:5332188-C-A | ** | ||||||||
| hg19:Y:2788571-CT-C hg38:Y:2920530-CT-C | ** | ||||||||
| hg19:Y:2858032-G-T hg38:Y:2989991-G-T | ** | ||||||||
| hg19:Y:2947784-T-C hg38:Y:3079743-T-C | ** | ||||||||
| hg19:Y:2977309-A-G hg38:Y:3109268-A-G | ** | ||||||||
| hg19:Y:3098173-G-T hg38:Y:3230132-G-T | ** | ||||||||
| hg19:Y:3218617-G-C hg38:Y:3350576-G-C | ** | ||||||||
| hg19:Y:3392180-T-G hg38:Y:3524139-T-G | ** | ||||||||
| hg19:Y:3408517-A-G hg38:Y:3540476-A-G | ** | ||||||||
| hg19:Y:3505504-C-T hg38:Y:3637463-C-T | ** | ||||||||
| hg19:Y:3518413-T-C hg38:Y:3650372-T-C | ** | ||||||||
| hg19:Y:3592438-G-T hg38:Y:3724397-G-T | ** | ||||||||
| hg19:Y:4080832-T-C hg38:Y:4212791-T-C | ** | ||||||||
| hg19:Y:4103022-T-G hg38:Y:4234981-T-G | ** | ||||||||
| hg19:Y:4126140-A-G hg38:Y:4258099-A-G | ** | ||||||||
| hg19:Y:4235579-A-G hg38:Y:4367538-A-G | ** | ||||||||
| hg19:Y:4262691-T-C hg38:Y:4394650-T-C | ** | ||||||||
| hg19:Y:4460082-C-A hg38:Y:4592041-C-A | ** | ||||||||
| hg19:Y:4484704-G-T hg38:Y:4616663-G-T | ** | ||||||||
| hg19:Y:4688042-A-C hg38:Y:4820001-A-C | ** | ||||||||
| hg19:Y:4889294-G-A hg38:Y:5021253-G-A | ** | ||||||||
| hg19:Y:5071883-A-G hg38:Y:5203842-A-G | ** | ||||||||
| hg19:Y:5172293-C-A hg38:Y:5304252-C-A | ** | ||||||||
| hg19:Y:5221455-C-A hg38:Y:5353414-C-A | ** | ||||||||
| hg19:Y:5294493-T-C hg38:Y:5426452-T-C | ** | ||||||||
| hg19:Y:5405946-A-G hg38:Y:5537905-A-G | ** | ||||||||
| hg19:Y:5421157-T-C hg38:Y:5553116-T-C | ** | ||||||||
| hg19:Y:5426715-A-T hg38:Y:5558674-A-T | ** | ||||||||
| hg19:Y:5446181-C-A hg38:Y:5578140-C-A | ** | ||||||||
| hg19:Y:5534541-C-A hg38:Y:5666500-C-A | ** | ||||||||
| hg19:Y:5798264-G-T hg38:Y:5930223-G-T | ** | ||||||||
| hg19:Y:5824045-C-A hg38:Y:5956004-C-A | ** | ||||||||
| hg19:Y:5968785-C-A hg38:Y:6100744-C-A | ** | ||||||||
| hg19:Y:6063076-C-A hg38:Y:6195035-C-A | ** | ||||||||
| hg19:Y:6064400-AT-A hg38:Y:6196359-AT-A | ** | ||||||||
| hg19:Y:6065430-G-T hg38:Y:6197389-G-T | ** | ||||||||
| hg19:Y:6330117-A-AG hg38:Y:6462076-A-AG | IR3_Dst | ** | |||||||
| hg19:Y:6365340-C-A hg38:Y:6497299-C-A | ** | ||||||||
| hg19:Y:6369900-AT-A hg38:Y:6501859-AT-A | ** | ||||||||
| hg19:Y:6465471-GC-G hg38:Y:6597430-GC-G | ** | ||||||||
| hg19:Y:6505189-G-T hg38:Y:6637148-G-T | ** | ||||||||
| hg19:Y:6688696-G-C hg38:Y:6820655-G-C | ** | ||||||||
| hg19:Y:6693010-T-C hg38:Y:6824969-T-C | ** | ||||||||
| hg19:Y:6915883-C-A hg38:Y:7047842-C-A | ** | ||||||||
| hg19:Y:7038717-C-T hg38:Y:7170676-C-T | ** | ||||||||
| hg19:Y:7063693-C-A hg38:Y:7195652-C-A | ** | ||||||||
| hg19:Y:7063725-C-G hg38:Y:7195684-C-G | ** | ||||||||
| hg19:Y:7081735-T-A hg38:Y:7213694-T-A | ** | ||||||||
| hg19:Y:7087901-CT-C hg38:Y:7219860-CT-C | ** | ||||||||
| hg19:Y:7097440-G-T hg38:Y:7229399-G-T | ** | ||||||||
| hg19:Y:7134786-C-A hg38:Y:7266745-C-A | ** | ||||||||
| hg19:Y:7138308-A-G hg38:Y:7270267-A-G | ** | ||||||||
| hg19:Y:7142303-C-A hg38:Y:7274262-C-A | ** | ||||||||
| hg19:Y:7240974-A-G hg38:Y:7372933-A-G | ** | ||||||||
| hg19:Y:7241014-C-G hg38:Y:7372973-C-G | ** | ||||||||
| hg19:Y:7294705-TCATAC-T hg38:Y:7426664-TCATAC-T | ** | ||||||||
| hg19:Y:7299177-C-A hg38:Y:7431136-C-A | ** | ||||||||
| hg19:Y:7422375-A-T hg38:Y:7554334-A-T | ** | ||||||||
| hg19:Y:7656788-C-T hg38:Y:7788747-C-T | ** | ||||||||
| hg19:Y:7699331-C-A hg38:Y:7831290-C-A | ** | ||||||||
| hg19:Y:7753213-C-A hg38:Y:7885172-C-A | ** | ||||||||
| hg19:Y:7783160-C-T hg38:Y:7915119-C-T | ** | ||||||||
| hg19:Y:7864156-T-C hg38:Y:7996115-T-C | ** | ||||||||
| hg19:Y:8078396-G-T hg38:Y:8210355-G-T | ** | ||||||||
| hg19:Y:8296777-G-A hg38:Y:8428736-G-A | ** | ||||||||
| hg19:Y:8296818-G-A hg38:Y:8428777-G-A | ** | ||||||||
| hg19:Y:8369642-T-G hg38:Y:8501601-T-G | ** | ||||||||
| hg19:Y:8674180-C-A hg38:Y:8806139-C-A | ** | ||||||||
| hg19:Y:8679413-C-A hg38:Y:8811372-C-A | ** | ||||||||
| hg19:Y:8698977-G-T hg38:Y:8830936-G-T | ** | ||||||||
| hg19:Y:8699034-G-T hg38:Y:8830993-G-T | ** | ||||||||
| hg19:Y:8712258-GA-G hg38:Y:8844217-GA-G | ** | ||||||||
| hg19:Y:8720537-G-T hg38:Y:8852496-G-T | ** | ||||||||
| hg19:Y:8736830-T-C hg38:Y:8868789-T-C | ** | ||||||||
| hg19:Y:8762163-C-G hg38:Y:8894122-C-G | ** | ||||||||
| hg38:Y:9056421-C-A | ** | ||||||||
| hg38:Y:9109430-C-T | ** | ||||||||
| hg19:Y:8988394-C-G hg38:Y:9150785-C-G | ** | ||||||||
| hg19:Y:9403167-T-C hg38:Y:9565558-T-C | ** | ||||||||
| hg19:Y:9936897-T-G hg38:Y:10099288-T-G | ** | ||||||||
| hg19:Y:10011095-C-T hg38:Y:10173486-C-T | ** | ||||||||
| hg38:Y:10658006-C-G | ** | ||||||||
| hg38:Y:10693031-G-T | ** | ||||||||
| hg38:Y:10693061-T-C | ** | ||||||||
| hg38:Y:10750209-A-G | ** | ||||||||
| hg38:Y:10753018-C-T | ** | ||||||||
| hg38:Y:10757524-C-A | ** | ||||||||
| hg38:Y:10764622-C-T | ** | ||||||||
| hg38:Y:10772821-G-C | ** | ||||||||
| hg38:Y:10772888-C-A | ** | ||||||||
| hg38:Y:10775350-C-A | ** | ||||||||
| hg38:Y:10787799-G-T | ** | ||||||||
| hg38:Y:10788959-C-T | ** | ||||||||
| hg38:Y:10817429-C-G | ** | ||||||||
| hg38:Y:10830028-C-T | ** | ||||||||
| hg38:Y:10850260-A-T | ** | ||||||||
| hg38:Y:10868201-C-A | ** | ||||||||
| hg38:Y:10875915-T-C | ** | ||||||||
| hg38:Y:10889934-C-G | ** | ||||||||
| hg38:Y:10894206-C-A | ** | ||||||||
| hg38:Y:10894896-A-G | ** | ||||||||
| hg38:Y:10943431-C-A | ** | ||||||||
| hg38:Y:10947626-CTATT-C | ** | ||||||||
| hg38:Y:10947633-AT-A | ** | ||||||||
| hg38:Y:10950759-T-A | ** | ||||||||
| hg38:Y:10971882-C-A | ** | ||||||||
| hg38:Y:10991420-C-A | ** | ||||||||
| hg38:Y:10992949-C-A | ** | ||||||||
| hg38:Y:10997484-T-A | ** | ||||||||
| hg19:Y:13227082-A-G hg38:Y:11071406-A-G | ** | ||||||||
| hg19:Y:13234978-C-A hg38:Y:11079302-C-A | ** | ||||||||
| hg19:Y:13315467-G-T hg38:Y:11159791-G-T | ** | ||||||||
| hg19:Y:13323369-C-A hg38:Y:11167693-C-A | ** | ||||||||
| hg19:Y:13330234-C-A hg38:Y:11174558-C-A | ** | ||||||||
| hg19:Y:13462332-C-T hg38:Y:11306656-C-T | ** | ||||||||
| hg19:Y:13498541-C-A hg38:Y:11342865-C-A | ** | ||||||||
| hg19:Y:13522122-G-T hg38:Y:11366446-G-T | ** | ||||||||
| hg19:Y:13594319-C-A hg38:Y:11438643-C-A | ** | ||||||||
| hg19:Y:13620231-A-G hg38:Y:11464555-A-G | ** | ||||||||
| hg38:Y:11649971-G-T | DYZ17 | ** | |||||||
| hg38:Y:11664077-A-G | DYZ17 | ** | |||||||
| hg19:Y:13855015-C-A hg38:Y:11734309-C-A | DYZ17 | ** | |||||||
| hg19:Y:13896191-A-G hg38:Y:11775485-A-G | ** | ||||||||
| hg19:Y:13976715-C-A hg38:Y:11856009-C-A | ** | ||||||||
| hg19:Y:13981451-C-T hg38:Y:11860745-C-T | ** | ||||||||
| hg19:Y:14009491-T-A hg38:Y:11888785-T-A | ** | ||||||||
| hg19:Y:14032594-TA-T hg38:Y:11911888-TA-T | ** | ||||||||
| hg19:Y:14038125-T-A hg38:Y:11917419-T-A | ** | ||||||||
| hg19:Y:14050551-T-A hg38:Y:11929845-T-A | ** | ||||||||
| hg19:Y:14053145-C-A hg38:Y:11932439-C-A | ** | ||||||||
| hg19:Y:14077231-A-G hg38:Y:11956525-A-G | ** | ||||||||
| hg19:Y:14186992-C-A hg38:Y:12066286-C-A | ** | ||||||||
| hg19:Y:14191427-G-T hg38:Y:12070721-G-T | ** | ||||||||
| hg19:Y:14218804-C-A hg38:Y:12098098-C-A | ** | ||||||||
| hg19:Y:14233010-C-A hg38:Y:12112304-C-A | ** | ||||||||
| hg19:Y:14239473-C-A hg38:Y:12118767-C-A | ** | ||||||||
| hg19:Y:14269805-C-A hg38:Y:12149099-C-A | ** | ||||||||
| hg19:Y:14269819-C-A hg38:Y:12149113-C-A | ** | ||||||||
| hg19:Y:14297017-CA-C hg38:Y:12176311-CA-C | 8×A | ** | |||||||
| hg19:Y:14303563-C-A hg38:Y:12182857-C-A | ** | ||||||||
| hg19:Y:14328156-T-C hg38:Y:12207450-T-C | ** | ||||||||
| hg19:Y:14350180-C-A hg38:Y:12229475-C-A | ** | ||||||||
| hg19:Y:14366481-A-T hg38:Y:12245776-A-T | ** | ||||||||
| hg19:Y:14420605-C-A hg38:Y:12299880-C-A | ** | ||||||||
| hg19:Y:14473762-AG-A hg38:Y:12353031-AG-A | ** | ||||||||
| hg19:Y:14511173-A-T hg38:Y:12399378-A-T | ** | ||||||||
| hg19:Y:14511315-TA-T hg38:Y:12399520-TA-T | ** | ||||||||
| hg19:Y:14620942-T-C hg38:Y:12509140-T-C | ** | ||||||||
| hg19:Y:14689182-C-A hg38:Y:12577248-C-A | ** | ||||||||
| hg19:Y:14741813-C-T hg38:Y:12629881-C-T | ** | ||||||||
| hg19:Y:14768471-T-A hg38:Y:12656540-T-A | ** | ||||||||
| hg19:Y:14992907-A-G hg38:Y:12880992-A-G | ** | ||||||||
| hg19:Y:15092508-A-G hg38:Y:12980597-A-G | ** | ||||||||
| hg19:Y:15170829-G-T hg38:Y:13058915-G-T | ** | ||||||||
| hg19:Y:15177725-C-A hg38:Y:13065811-C-A | ** | ||||||||
| hg19:Y:15280637-A-T hg38:Y:13168736-A-T | ** | ||||||||
| hg19:Y:15302498-C-A hg38:Y:13190597-C-A | ** | ||||||||
| hg19:Y:15334624-C-A hg38:Y:13222742-C-A | ** | ||||||||
| hg19:Y:15400450-T-C hg38:Y:13288570-T-C | ** | ||||||||
| hg19:Y:15402821-T-G hg38:Y:13290941-T-G | ** | ||||||||
| hg19:Y:15541851-C-A hg38:Y:13429971-C-A | ** | ||||||||
| hg19:Y:15542645-T-C hg38:Y:13430765-T-C | ** | ||||||||
| hg19:Y:15647648-C-A hg38:Y:13535768-C-A | ** | ||||||||
| hg19:Y:15648741-T-C hg38:Y:13536861-T-C | ** | ||||||||
| hg19:Y:15858254-T-A hg38:Y:13746374-T-A | ** | ||||||||
| hg19:Y:15863066-G-T hg38:Y:13751186-G-T | ** | ||||||||
| hg19:Y:15863181-A-C hg38:Y:13751301-A-C | ** | ||||||||
| hg19:Y:15927735-A-C hg38:Y:13815855-A-C | ** | ||||||||
| hg19:Y:15928549-CA-C hg38:Y:13816669-CA-C | ** | ||||||||
| hg19:Y:15995480-C-A hg38:Y:13883600-C-A | ** | ||||||||
| hg19:Y:16000998-A-C hg38:Y:13889118-A-C | ** | ||||||||
| hg19:Y:16005419-A-G hg38:Y:13893539-A-G | ** | ||||||||
| hg19:Y:16031222-C-A hg38:Y:13919342-C-A | ** | ||||||||
| hg19:Y:16062528-C-A hg38:Y:13950648-C-A | ** | ||||||||
| hg19:Y:16309338-C-T hg38:Y:14197458-C-T | FTB45649 | ** | |||||||
| hg19:Y:16445765-T-C hg38:Y:14333885-T-C | ** | ||||||||
| hg19:Y:16612423-T-C hg38:Y:14500543-T-C | ** | ||||||||
| hg19:Y:16648237-C-G hg38:Y:14536357-C-G | ** | ||||||||
| hg19:Y:16668031-C-A hg38:Y:14556151-C-A | ** | ||||||||
| hg19:Y:16705554-G-C hg38:Y:14593674-G-C | ** | ||||||||
| hg19:Y:16777791-C-A hg38:Y:14665911-C-A | ** | ||||||||
| hg19:Y:16881559-C-A hg38:Y:14769679-C-A | ** | ||||||||
| hg19:Y:16915111-A-G hg38:Y:14803231-A-G | ** | ||||||||
| hg19:Y:16932066-T-G hg38:Y:14820186-T-G | ** | ||||||||
| hg19:Y:17318265-C-T hg38:Y:15206385-C-T | ** | ||||||||
| hg19:Y:17373256-C-A hg38:Y:15261376-C-A | ** | ||||||||
| hg19:Y:17385477-C-A hg38:Y:15273597-C-A | ** | ||||||||
| hg19:Y:17500416-T-G hg38:Y:15388536-T-G | ** | ||||||||
| hg19:Y:17548450-A-G hg38:Y:15436570-A-G | ** | ||||||||
| hg19:Y:17567545-C-A hg38:Y:15455665-C-A | ** | ||||||||
| hg19:Y:17648462-C-A hg38:Y:15536582-C-A | ** | ||||||||
| hg19:Y:17713932-C-A hg38:Y:15602052-C-A | ** | ||||||||
| hg19:Y:17713964-C-A hg38:Y:15602084-C-A | ** | ||||||||
| hg19:Y:17854576-C-A hg38:Y:15742696-C-A | ** | ||||||||
| hg19:Y:17903308-G-T hg38:Y:15791428-G-T | ** | ||||||||
| hg19:Y:18127653-C-T hg38:Y:16015773-C-T | ** | ||||||||
| hg19:Y:18192016-C-A hg38:Y:16080136-C-A | ** | ||||||||
| hg19:Y:18201006-T-A hg38:Y:16089126-T-A | ** | ||||||||
| hg19:Y:18402532-C-A hg38:Y:16290652-C-A | P6_Gap | ** | |||||||
| hg19:Y:18518295-TGTGC-T hg38:Y:16406415-TGTGC-T | P6_Dst | ** | |||||||
| hg19:Y:18847649-T-C hg38:Y:16735769-T-C | ** | ||||||||
| hg19:Y:18848563-T-A hg38:Y:16736683-T-A | ** | ||||||||
| hg19:Y:18864750-C-A hg38:Y:16752870-C-A | ** | ||||||||
| hg19:Y:18869150-C-A hg38:Y:16757270-C-A | ** | ||||||||
| hg19:Y:18930569-C-G hg38:Y:16818689-C-G | ** | ||||||||
| hg19:Y:18966036-T-C hg38:Y:16854156-T-C | ** | ||||||||
| hg19:Y:19031380-T-A hg38:Y:16919500-T-A | ** | ||||||||
| hg19:Y:19066012-C-A hg38:Y:16954132-C-A | ** | ||||||||
| hg19:Y:19351630-G-T hg38:Y:17239750-G-T | ** | ||||||||
| hg19:Y:19351646-T-C hg38:Y:17239766-T-C | ** | ||||||||
| hg19:Y:19410046-A-T hg38:Y:17298166-A-T | ** | ||||||||
| hg19:Y:19925894-A-G hg38:Y:17814014-A-G | P5_Prx | ** | |||||||
| hg19:Y:19992544-C-A hg38:Y:17880664-C-A | P5_Prx | ** | |||||||
| hg19:Y:20690177-C-CCT hg38:Y:18528291-C-CCT | P4_Prx | ** | |||||||
| hg19:Y:20809809-C-A hg38:Y:18647923-C-A | P4_Gap | ** | |||||||
| hg19:Y:21054482-C-A hg38:Y:18892596-C-A | ** | ||||||||
| hg19:Y:21111853-C-G hg38:Y:18949967-C-G | ** | ||||||||
| hg19:Y:21247974-C-A hg38:Y:19086088-C-A | ** | ||||||||
| hg19:Y:21388681-T-C hg38:Y:19226795-T-C | ** | ||||||||
| hg19:Y:21450548-G-C hg38:Y:19288662-G-C | ** | ||||||||
| hg19:Y:21488919-C-A hg38:Y:19327033-C-A | ** | ||||||||
| hg19:Y:21489108-C-A hg38:Y:19327222-C-A | ** | ||||||||
| hg19:Y:21522861-C-A hg38:Y:19360975-C-A | ** | ||||||||
| hg19:Y:21576393-G-T hg38:Y:19414507-G-T | ** | ||||||||
| hg19:Y:21747835-T-C hg38:Y:19585949-T-C | ** | ||||||||
| hg19:Y:21748030-C-A hg38:Y:19586144-C-A | ** | ||||||||
| hg19:Y:21821545-G-C hg38:Y:19659659-G-C | ** | ||||||||
| hg19:Y:21954643-C-A hg38:Y:19792757-C-A | ** | ||||||||
| hg19:Y:22027745-G-T hg38:Y:19865859-G-T | ** | ||||||||
| hg19:Y:22064331-C-A hg38:Y:19902445-C-A | ** | ||||||||
| hg19:Y:22124125-G-T hg38:Y:19962239-G-T | ** | ||||||||
| hg19:Y:22128622-C-A hg38:Y:19966736-C-A | ** | ||||||||
| hg19:Y:22171658-C-A hg38:Y:20009772-C-A | ** | ||||||||
| hg19:Y:22480665-T-C hg38:Y:20318779-T-C | DYZ19 | ** | |||||||
| hg19:Y:22488226-C-A hg38:Y:20326340-C-A | DYZ19 | ** | |||||||
| hg19:Y:22756934-A-G hg38:Y:20595048-A-G | ** | ||||||||
| hg19:Y:22811096-TG-T hg38:Y:20649210-TG-T | ** | ||||||||
| hg19:Y:22991049-C-A hg38:Y:20829163-C-A | ** | ||||||||
| hg19:Y:23059593-ATTT-A hg38:Y:20897707-ATTT-A | 12×T | ** | |||||||
| hg19:Y:23061751-T-C hg38:Y:20899865-T-C | ** | ||||||||
| hg19:Y:23252549-G-A hg38:Y:21090663-G-A | ** | ||||||||
| hg19:Y:23355375-A-G hg38:Y:21193489-A-G | FT375989 | ** | |||||||
| hg19:Y:23355512-C-A hg38:Y:21193626-C-A | ** | ||||||||
| hg19:Y:23600195-T-C hg38:Y:21438309-T-C | ** | ||||||||
| hg19:Y:23609378-C-A hg38:Y:21447492-C-A | ** | ||||||||
| hg19:Y:23786366-G-T hg38:Y:21624480-G-T | ** | ||||||||
| hg19:Y:23848543-C-G hg38:Y:21686657-C-G | ** | ||||||||
| hg19:Y:23875562-G-A hg38:Y:21713676-G-A | ** | ||||||||
| hg19:Y:24404834-C-A hg38:Y:22258687-C-A | BY202213 | ** | |||||||
| hg19:Y:24424230-C-A hg38:Y:22278083-C-A | ** | ||||||||
| hg19:Y:26834683-G-T hg38:Y:24688536-G-T | P1_g2 | ** | |||||||
| hg19:Y:27232143-CTT-C hg38:Y:25085996-CTT-C | P1_g3 | ** | |||||||
| hg19:Y:27552666-G-T hg38:Y:25406519-G-T | P1_Y2 | ** | |||||||
| hg19:Y:27561628-C-A hg38:Y:25415481-C-A | P1_Y2 | ** | |||||||
| hg19:Y:28462147-G-C hg38:Y:26316000-G-C | ** | ||||||||
| hg19:Y:28462150-A-C hg38:Y:26316003-A-C | ** | ||||||||
| hg19:Y:28473737-G-C hg38:Y:26327590-G-C | ** | ||||||||
| hg19:Y:28532643-C-T hg38:Y:26386496-C-T | ** | ||||||||
| hg19:Y:28555772-C-A hg38:Y:26409625-C-A | ** | ||||||||
| hg19:Y:28716407-C-A hg38:Y:26570260-C-A | ** | ||||||||
| hg19:Y:28720063-C-A hg38:Y:26573916-C-A | ** | ||||||||
| hg19:Y:28727626-A-G hg38:Y:26581479-A-G | ** | ||||||||
| hg19:Y:28756062-C-A hg38:Y:26609915-C-A | ** | ||||||||
| hg19:Y:28762441-T-C hg38:Y:26616294-T-C | ** | ||||||||
| hg19:Y:28776270-C-A hg38:Y:26630123-C-A | ** | ||||||||
| hg19:Y:28795720-G-A hg38:Y:26649573-G-A | ** | ||||||||
| hg38:Y:56838806-A-G | ** | ||||||||
| hg38:Y:56844500-T-C | ** | ||||||||
| hg19:Y:15143329-C-A hg38:Y:13031416-C-A | ** | ||||||||
| hg19:Y:17990508-C-A hg38:Y:15878628-C-A | P7_Prx | ** | |||||||
| hg19:Y:19582246-G-T hg38:Y:17470366-G-T | P5_Prx | ** | |||||||
| hg19:Y:20685586-C-A hg38:Y:18523700-C-A | P4_Prx | ** | |||||||
| hg19:Y:26018423-G-T hg38:Y:23872276-G-T | P1_Y1 | ** | |||||||
| hg19:Y:26352646-A-C hg38:Y:24206499-A-C | P1_Y1 | ** | |||||||
| hg19:Y:26359629-A-G hg38:Y:24213482-A-G | P1_Y1 | ** | |||||||
| hg19:Y:26394709-C-A hg38:Y:24248562-C-A | P1_Y1 | ** | |||||||
| hg19:Y:26461472-TA-T hg38:Y:24315325-TA-T | P1_Y1 | 17×A | ** | ||||||
| hg19:Y:26461508-C-A hg38:Y:24315361-C-A | P1_Y1 | ** | |||||||
| hg19:Y:13817996-A-G hg38:Y:11697290-A-G | DYZ17 | *** | |||||||
| hg19:Y:14264332-T-C hg38:Y:12143626-T-C | M1956 | *** | |||||||
| hg19:Y:6129805-T-G hg38:Y:6261764-T-G | *** | ||||||||
| hg19:Y:13855516-C-A hg38:Y:11734810-C-A | DYZ17 | *** | |||||||
| hg19:Y:22296703-T-A hg38:Y:20134817-T-A | DYZ19 | *** | |||||||
| hg19:Y:22300848-A-G hg38:Y:20138962-A-G | DYZ19 | *** | |||||||
| hg19:Y:22489525-C-A hg38:Y:20327639-C-A | DYZ19 | *** | |||||||
| hg19:Y:24111825-G-A hg38:Y:21965678-G-A | P3_b1 | *** | |||||||
| hg19:Y:9073219-CTTT-C hg38:Y:9235610-CTTT-C | 15×T | *** | |||||||
| hg38:Y:10965559-C-T | *** | ||||||||
| hg38:Y:11019441-T-A,C | *** | ||||||||
| hg19:Y:6971829-C-A hg38:Y:7103788-C-A | *** | ||||||||
| hg19:Y:4408511-A-AT hg38:Y:4540470-A-AT | *** | ||||||||
| hg38:Y:10658722-G-T | *** | ||||||||
| hg19:Y:13225960-G-A hg38:Y:11070284-G-A | *** | ||||||||
| hg19:Y:13904412-C-A hg38:Y:11783706-C-A | *** | ||||||||
| hg19:Y:14461188-C-A hg38:Y:12340461-C-A | *** | ||||||||
| hg19:Y:15375842-T-C hg38:Y:13263962-T-C | *** | ||||||||
| hg19:Y:17997381-C-A hg38:Y:15885501-C-A | P7_Gap | *** | |||||||
| hg19:Y:18911021-G-A hg38:Y:16799141-G-A | *** | ||||||||
| hg19:Y:21224779-ATTTTTT-A,ATTTTT hg38:Y:19062893-ATTTTTT-A,ATTTTT | 19×T | *** | |||||||
| hg19:Y:22176692-C-A hg38:Y:20014806-C-A | *** | ||||||||
| hg19:Y:22204556-A-T hg38:Y:20042670-A-T | *** | ||||||||
| hg19:Y:22300734-T-C hg38:Y:20138848-T-C | DYZ19 | *** | |||||||
| hg19:Y:23818227-G-T hg38:Y:21656341-G-T | *** | ||||||||
| hg19:Y:26314746-G-T hg38:Y:24168599-G-T | P1_Y1 | *** | |||||||
| hg19:Y:28532086-G-T hg38:Y:26385939-G-T | *** | ||||||||
| hg19:Y:5770336-GTCTTTTT-G hg38:Y:5902295-GTCTTTTT-G | *** | ||||||||
| hg19:Y:13962042-CTTTTTT-C,CTTTTT hg38:Y:11841336-CTTTTTT-C,CTTTTT | 28×T | *** | |||||||
| hg19:Y:21352577-A-G hg38:Y:19190691-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: N6856 | 10923881 | 7951016 | 8041580 |
| Kit: N6856 | 10003292 | 8123996 | 7994464 |
| Kit: N6856 | 15067216 | 9414173 | 8338450 |
| Used in age calculations | 15067216 | 9414173 | 8338450 |
| Counts of SNPs | 13 | 9 |
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