Brandt
FTDNA: 121330, BigY2: 121330Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 121330 | BigY2 121330 |
---|---|---|---|---|---|---|---|---|---|
6269101-C-T | 6401060-C-T | IR3_Dst | *** | A* | |||||
19653501-G-A | 17541621-G-A | P5_Prx | *** | A* | |||||
20055973-A-G | 17944093-A-G | P5_Prx | *** | A* | |||||
28816769-A-G | 26670622-A-G | A* | |||||||
28817001-T-A | 26670854-T-A | A* | |||||||
18886683-CCCTT-C | 16774803-CCCTT-C | 4×CCTT | *** | + | |||||
3407086-T-G | 3539045-T-G | Y60534 | + | + | |||||
6843726-A-C | 6975685-A-C | Y61048 | Y | Y | + | + | |||
7035415-T-G | 7167374-T-G | Y61421 | Y | Y | + | + | |||
7178180-C-T | 7310139-C-T | Y61648 | Y | Y | + | + | |||
7846346-C-T | 7978305-C-T | Y62682 | Y | Y | + | + | |||
7930816-C-T | 8062775-C-T | Y62838 | Y | Y | + | + | |||
8484540-G-C | 8616499-G-C | Y63888 | Y | Y | + | + | |||
8703659-A-T | 8835618-A-T | BY75299 | Y | Y | 18×T | + | + | ||
9794831-T-C | 9957222-T-C | Y65209 | Y | + | + | ||||
10010859-G-T | 10173250-G-T | FT426765 | Y | ** | + | ||||
13679630-A-G | 11523954-A-G | BY88167 | + | + | |||||
14801755-C-A | 12689826-C-A | Y67230 | Y | Y | + | + | |||
15010128-T-G | 12898213-T-G | Y67590 | Y | Y | + | + | |||
15371761-T-A | 13259881-T-A | Y68134 | Y | Y | + | + | |||
15373122-G-C | 13261242-G-C | Y68135 | Y | Y | + | + | |||
15434447-A-G | 13322567-A-G | BY101544 | Y | Y | + | + | |||
16604010-C-T | 14492130-C-T | Y70207 | Y | Y | + | + | |||
17251976-CA-C | 15140096-CA-C | + | + | ||||||
17944319-C-T | 15832439-C-T | Y72694 | Y | Y | + | + | |||
18650217-G-A | 16538337-G-A | Y73794 | Y | Y | + | + | |||
21114212-T-G | 18952326-T-G | Y75830 | Y | Y | + | + | |||
21333753-A-T | 19171867-A-T | Y76274 | Y | Y | + | + | |||
21665996-T-TC | 19504110-T-TC | + | + | ||||||
22294130-AG-A | 20132244-AG-A | DYZ19 | + | + | |||||
23648419-C-T | 21486533-C-T | Y80247 | Y | + | + | ||||
22287819-C-A | 20125933-C-A | FT455000 | DYZ19 | + | |||||
17274963-C-CAGATAGAT | 15163083-C-CAGATAGAT | 11×AGAT | *** | * | |||||
28792604-G-C | 26646457-G-C | *** | * | ||||||
58848138-A-T | 56742733-T-A | ** | |||||||
26170457-A-C | 24024310-A-C | BY23315 | P1_Y1 | ** | |||||
16599010-G-A | 14487130-G-A | ** | |||||||
21352775-C-T | 19190889-C-T | M1157 | ** | ||||||
22651339-C-T | 20489453-C-T | PF3094 M3609 | ** | ** | |||||
22292727-G-T | 20130841-G-T | DYZ19 | ** | ||||||
3536171-C-A | 3668130-C-A | ** | ** | ||||||
14102359-TTCTATCTA-T | 11981653-TTCTATCTA-T | 9×TCTA | *** | ** | |||||
22292729-C-A | 20130843-C-A | DYZ19 | ** | ||||||
15323633-C-T | 13211751-C-T | ** | |||||||
58848178-T-C | 56742693-A-G | ** | |||||||
13472185-A-T | 11316509-A-T | ** | |||||||
10969280-C-A | ** | ||||||||
21283364-C-A | 19121478-C-A | FTA46661 | ** | ||||||
10982940-C-T | ** | ||||||||
10982972-A-T | FT439132 | ** | |||||||
10982978-C-A | ** | ||||||||
10982984-T-A | ** | ||||||||
10982985-T-C | ** | ||||||||
26010317-CAG-C | 23864170-CAG-C | P1_Y1 | ** | ||||||
7282419-C-A | 7414378-C-A | ** | |||||||
11012308-C-A | ** | ||||||||
16479988-C-A | 14368108-C-A | ** | |||||||
10849145-C-A | ** | ||||||||
17707358-C-A | 15595478-C-A | ** | |||||||
6698816-C-A | 6830775-C-A | ** | |||||||
11012365-C-T | ** | ||||||||
16572749-C-A | 14460869-C-A | ** | |||||||
14391662-C-A | 12270958-C-A | ** | |||||||
3250696-C-CTT | 3382655-C-CTT | 14×T | ** | ||||||
21391650-C-T | 19229764-C-T | 14×T | ** | ||||||
16297369-G-T | 14185489-G-T | ** | |||||||
6874882-CA-C | 7006841-CA-C | 9×A | ** | ||||||
7000473-C-A | 7132432-C-A | ** | |||||||
11035987-A-G | ** | ||||||||
11035990-A-C | ** | ||||||||
11035999-CTTCTT-C | ** | ||||||||
11036015-C-A | ** | ||||||||
11036032-CTATATTCCTT-C | ** | ||||||||
3759245-C-A | 3891204-C-A | FT318384 | ** | ||||||
19071715-C-A | 16959835-C-A | ** | |||||||
10892589-A-T | ** | ||||||||
13935764-C-A | 11815058-C-A | ** | |||||||
14390042-C-A | 12269338-C-A | ** | |||||||
13988920-C-A | 11868214-C-A | ** | |||||||
3275749-C-A | 3407708-C-A | ** | |||||||
15491939-G-A | 13380059-G-A | ** | |||||||
7303197-C-A | 7435156-C-A | ** | |||||||
28545756-A-T | 26399609-A-T | ** | |||||||
3078447-C-G | 3210406-C-G | ** | |||||||
22662432-C-A | 20500546-C-A | ** | |||||||
10051310-C-A | 10213701-C-A | ** | |||||||
14053451-G-GA | 11932745-G-GA | 8×A | ** | ||||||
4213180-G-T | 4345139-G-T | ** | |||||||
14887875-C-A | 12775941-C-A | ** | |||||||
14451189-C-A | 12330462-C-A | ** | |||||||
10980629-TC-T | ** | ||||||||
10679446-G-T | ** | ||||||||
16336884-C-A | 14225004-C-A | ** | |||||||
11668622-T-C | ** | ||||||||
5912035-C-A | 6043994-C-A | ** | |||||||
7713265-C-A | 7845224-C-A | ** | |||||||
15280718-C-A | 13168817-C-A | ** | |||||||
10796123-A-T | ** | ||||||||
10020201-C-A | 10182592-C-A | ** | |||||||
7304380-C-A | 7436339-C-A | ** | |||||||
17317666-G-T | 15205786-G-T | ** | |||||||
3366495-C-A | 3498454-C-A | ** | |||||||
13539135-C-A | 11383459-C-A | ** | |||||||
7080703-C-A | 7212662-C-A | ** | |||||||
4665159-A-G | 4797118-A-G | ** | |||||||
16053610-C-A | 13941730-C-A | ** | |||||||
10973875-C-A | ** | ||||||||
14483290-C-A | 12362559-C-A | ** | |||||||
21959165-C-A | 19797279-C-A | FT202418 | 8×T | ** | |||||
13462338-C-A | 11306662-C-A | ** | |||||||
24264289-T-TC | 22118142-T-TC | P3_b1 | ** | ||||||
21211553-C-A | 19049667-C-A | ** | |||||||
8178915-C-A | 8310874-C-A | ** | |||||||
10855793-G-T | ** | ||||||||
17580763-C-A | 15468883-C-A | ** | |||||||
10961200-C-A | ** | ||||||||
4357577-G-T | 4489536-G-T | ** | |||||||
7039242-C-A | 7171201-C-A | ** | |||||||
10770158-T-C | ** | ||||||||
17159668-A-G | 15047788-A-G | ** | |||||||
17159674-G-A | 15047794-G-A | ** | |||||||
56742698-A-G | ** | ||||||||
5957373-C-A | 6089332-C-A | ** | |||||||
4136570-C-A | 4268529-C-A | FT194958 | ** | ||||||
10941263-C-A | ** | ||||||||
7935761-T-A | 8067720-T-A | ** | |||||||
10971907-C-G | ** | ||||||||
10925649-C-A | ** | ||||||||
19559758-G-T | 17447878-G-T | ** | |||||||
21807204-C-A | 19645318-C-A | ** | |||||||
11012270-T-C | ** | ||||||||
13226872-C-A | 11071196-C-A | ** | |||||||
8408476-C-A | 8540435-C-A | ** | |||||||
10892600-T-C | ** | ||||||||
7381731-C-A | 7513690-C-A | ** | |||||||
24671171-T-G | 22525024-T-G | P3_b2 | ** | ||||||
15106901-C-A | 12994988-C-A | ** | |||||||
11025999-A-C | ** | ||||||||
12450522-CTTT-C | 41×T | ** | |||||||
7237127-C-T | 7369086-C-T | ** | |||||||
8761952-C-A | 8893911-C-A | ** | |||||||
10958678-C-A | ** | ||||||||
14835343-A-T | 12723410-A-T | ** | |||||||
6911277-C-A | 7043236-C-A | ** | |||||||
15793538-C-A | 13681658-C-A | ** | |||||||
17318204-C-A | 15206324-C-A | ** | |||||||
15971658-C-A | 13859778-C-A | ** | |||||||
10934354-T-C | ** | ||||||||
3544457-C-A | 3676416-C-A | ** | |||||||
14300738-C-A | 12180032-C-A | ** | |||||||
18191686-C-A | 16079806-C-A | ** | |||||||
22018039-C-A | 19856153-C-A | ** | |||||||
10693197-C-A | ** | ||||||||
11026007-C-A | ** | ||||||||
17159658-T-G | 15047778-T-G | ** | |||||||
17159662-A-C | 15047782-A-C | ** | |||||||
18951931-C-A | 16840051-C-A | ** | |||||||
13927981-C-A | 11807275-C-A | ** | |||||||
13295273-T-C | 11139597-T-C | ** | |||||||
13603287-C-A | 11447611-C-A | ** | |||||||
17569197-C-A | 15457317-C-A | ** | |||||||
21912402-C-A | 19750516-C-A | ** | |||||||
19168965-C-A | 17057085-C-A | ** | |||||||
8181371-A-C | 8313330-A-C | ** | |||||||
5710038-C-A | 5841997-C-A | ** | |||||||
10983627-T-C | ** | ||||||||
13226376-C-A | 11070700-C-A | ** | |||||||
8379548-G-A | 8511507-G-A | ** | |||||||
15398355-C-A | 13286475-C-A | ** | |||||||
14032430-C-A | 11911724-C-A | ** | |||||||
13902845-C-A | 11782139-C-A | ** | |||||||
11016356-C-A | ** | ||||||||
16259110-C-A | 14147230-C-A | ** | |||||||
22292720-T-A | 20130834-T-A | DYZ19 | ** | ||||||
7304523-C-A | 7436482-C-A | ** | |||||||
10816064-C-A | ** | ||||||||
24422473-C-A | 22276326-C-A | ** | |||||||
14605768-C-A | 12493970-C-A | ** | |||||||
14159707-C-A | 12039001-C-A | ** | |||||||
5852050-C-A | 5984009-C-A | ** | |||||||
19476592-A-G | 17364712-A-G | ** | |||||||
28658477-C-A | 26512330-C-A | ** | |||||||
19331702-C-A | 17219822-C-A | ** | |||||||
21323326-C-A | 19161440-C-A | ** | |||||||
2683425-G-C | 2815384-G-C | ** | |||||||
2817175-A-G | 2949134-A-G | ** | |||||||
2856817-C-CTCTCTT | 2988776-C-CTCTCTT | ** | |||||||
2865898-C-G | 2997857-C-G | ** | |||||||
2865906-G-A | 2997865-G-A | FT406732 | ** | ||||||
2865908-A-G | 2997867-A-G | ** | |||||||
2865928-C-T | 2997887-C-T | ** | |||||||
2865935-C-T | 2997894-C-T | ** | |||||||
2865944-T-A | 2997903-T-A | ** | |||||||
2865950-T-C | 2997909-T-C | ** | |||||||
2865956-T-G | 2997915-T-G | ** | |||||||
2865974-T-C | 2997933-T-C | ** | |||||||
2914970-T-C | 3046929-T-C | ** | |||||||
2919353-G-C | 3051312-G-C | ** | |||||||
3015732-C-A | 3147691-C-A | ** | |||||||
3229098-C-A | 3361057-C-A | ** | |||||||
3285016-G-T | 3416975-G-T | ** | |||||||
3328810-C-A | 3460769-C-A | ** | |||||||
3334396-G-A | 3466355-G-A | ** | |||||||
3346429-A-G | 3478388-A-G | ** | |||||||
3509263-G-T | 3641222-G-T | ** | |||||||
3545613-T-A | 3677572-T-A | ** | |||||||
3620919-T-C | 3752878-T-C | ** | |||||||
3627453-T-C | 3759412-T-C | ** | |||||||
3627885-T-C | 3759844-T-C | ** | |||||||
3650782-G-A | 3782741-G-A | ** | |||||||
3823894-G-T | 3955853-G-T | ** | |||||||
3965737-C-A | 4097696-C-A | ** | |||||||
3972619-G-T | 4104578-G-T | ** | |||||||
4063073-T-A | 4195032-T-A | ** | |||||||
4159580-C-A | 4291539-C-A | ** | |||||||
4460871-G-T | 4592830-G-T | ** | |||||||
4527272-T-G | 4659231-T-G | ** | |||||||
4665090-C-A | 4797049-C-A | ** | |||||||
4779947-G-A | 4911906-G-A | ** | |||||||
4873739-G-T | 5005698-G-T | ** | |||||||
4900825-A-G | 5032784-A-G | ** | |||||||
5021862-C-T | 5153821-C-T | ** | |||||||
5060227-C-A | 5192186-C-A | ** | |||||||
5061143-G-T | 5193102-G-T | ** | |||||||
5084142-C-A | 5216101-C-A | ** | |||||||
5084906-C-A | 5216865-C-A | ** | |||||||
5170387-C-A | 5302346-C-A | ** | |||||||
5246655-C-A | 5378614-C-A | ** | |||||||
5309567-C-A | 5441526-C-A | ** | |||||||
5411831-T-A | 5543790-T-A | ** | |||||||
5644698-C-A | 5776657-C-A | ** | |||||||
5873560-C-T | 6005519-C-T | ** | |||||||
5971102-T-A | 6103061-T-A | ** | |||||||
6392707-G-T | 6524666-G-T | ** | |||||||
6435118-T-A | 6567077-T-A | ** | |||||||
6474630-A-G | 6606589-A-G | ** | |||||||
6486842-C-A | 6618801-C-A | ** | |||||||
6490670-C-A | 6622629-C-A | ** | |||||||
6503547-A-T | 6635506-A-T | ** | |||||||
6580674-A-AT | 6712633-A-AT | 9×T | ** | ||||||
6582857-T-C | 6714816-T-C | ** | |||||||
6748775-A-G | 6880734-A-G | ** | |||||||
6774127-C-A | 6906086-C-A | ** | |||||||
6778872-C-A | 6910831-C-A | ** | |||||||
6826965-C-G | 6958924-C-G | ** | |||||||
6948190-C-A | 7080149-C-A | ** | |||||||
6976150-C-A | 7108109-C-A | ** | |||||||
7029858-T-G | 7161817-T-G | ** | |||||||
7082713-G-A | 7214672-G-A | ** | |||||||
7091231-A-G | 7223190-A-G | ** | |||||||
7108470-C-A | 7240429-C-A | ** | |||||||
7142862-C-A | 7274821-C-A | ** | |||||||
7160523-C-A | 7292482-C-A | ** | |||||||
7233068-C-A | 7365027-C-A | ** | |||||||
7248192-C-A | 7380151-C-A | ** | |||||||
7348883-A-T | 7480842-A-T | ** | |||||||
7348935-T-G | 7480894-T-G | ** | |||||||
7436218-C-A | 7568177-C-A | ** | |||||||
7724676-G-T | 7856635-G-T | ** | |||||||
7939180-A-G | 8071139-A-G | Y62855 | ** | ||||||
7969605-T-G | 8101564-T-G | ** | |||||||
8017011-T-C | 8148970-T-C | ** | |||||||
8052352-C-A | 8184311-C-A | ** | |||||||
8080241-G-A | 8212200-G-A | ** | |||||||
8181358-G-T | 8313317-G-T | ** | |||||||
8345734-A-G | 8477693-A-G | ** | |||||||
8669645-C-A | 8801604-C-A | ** | |||||||
8692099-T-C | 8824058-T-C | ** | |||||||
8736752-C-A | 8868711-C-A | ** | |||||||
8827105-C-A | 8959064-C-A | ** | |||||||
9015773-T-C | 9178164-T-C | ** | |||||||
9140098-C-T | 9302489-C-T | ** | |||||||
9162901-G-T | 9325292-G-T | ** | |||||||
9211386-C-A | 9373777-C-A | ** | |||||||
9433766-A-G | 9596157-A-G | ** | |||||||
9456089-C-A | 9618480-C-A | ** | |||||||
9799370-G-A | 9961761-G-A | ** | |||||||
9931380-T-C | 10093771-T-C | ** | |||||||
9957945-C-A | 10120336-C-A | ** | |||||||
9962127-C-A | 10124518-C-A | ** | |||||||
9966045-G-T | 10128436-G-T | ** | |||||||
9967262-TC-T | 10129653-TC-T | ** | |||||||
9973553-G-A | 10135944-G-A | ** | |||||||
10026145-T-C | 10188536-T-C | ** | |||||||
10057006-C-A | 10219397-C-A | ** | |||||||
10657534-C-A | ** | ||||||||
10671950-G-T | ** | ||||||||
10672557-TC-T | ** | ||||||||
10685762-C-T | ** | ||||||||
10685763-A-G | ** | ||||||||
10687278-C-T | ** | ||||||||
10747690-G-T | ** | ||||||||
10785766-C-A | ** | ||||||||
10794615-C-A | ** | ||||||||
10800389-C-A | ** | ||||||||
10814731-T-A | ** | ||||||||
10822716-C-A | ** | ||||||||
10839396-C-G | ** | ||||||||
10848258-A-T | ** | ||||||||
10869497-C-G | ** | ||||||||
10873717-C-T | FT434985 | ** | |||||||
10892541-T-TGACC | ** | ||||||||
10892544-A-AATTATT | ** | ||||||||
10894493-G-C | ** | ||||||||
10894498-T-C | ** | ||||||||
10898591-T-A | ** | ||||||||
10917215-G-T | ** | ||||||||
10933465-C-G | ** | ||||||||
10933469-C-A | ** | ||||||||
10933472-T-C | ** | ||||||||
10939677-C-A | ** | ||||||||
10955480-C-TTT | ** | ||||||||
10955509-T-C | ** | ||||||||
10962695-C-A | ** | ||||||||
10969148-C-A | ** | ||||||||
10975032-T-C | ** | ||||||||
10979697-C-A | ** | ||||||||
10984873-C-T | ** | ||||||||
11012263-C-A | ** | ||||||||
11012305-T-C | ** | ||||||||
11012320-T-A | ** | ||||||||
11012343-C-T | ** | ||||||||
11013058-C-G | ** | ||||||||
11013068-A-C | ** | ||||||||
11014110-C-A | ** | ||||||||
11018171-T-G | ** | ||||||||
11020300-C-A | ** | ||||||||
11020571-T-C | ** | ||||||||
11026085-C-G | ** | ||||||||
11033090-G-A | ** | ||||||||
13194003-C-A | 11038327-C-A | ** | |||||||
13199224-C-A | 11043548-C-A | ** | |||||||
13222012-A-G | 11066336-A-G | ** | |||||||
13236340-G-T | 11080664-G-T | ** | |||||||
13237516-C-A | 11081840-C-A | ** | |||||||
13253536-C-A | 11097860-C-A | ** | |||||||
13272475-C-A | 11116799-C-A | ** | |||||||
13287402-A-T | 11131726-A-T | ** | |||||||
13295969-C-A | 11140293-C-A | ** | |||||||
13310836-G-A | 11155160-G-A | ** | |||||||
13495767-A-G | 11340091-A-G | ** | |||||||
13497909-C-A | 11342233-C-A | ** | |||||||
13588253-C-A | 11432577-C-A | ** | |||||||
13593148-G-T | 11437472-G-T | ** | |||||||
13605654-T-A | 11449978-T-A | BY19360 | ** | ||||||
11645708-G-T | ** | ||||||||
11647182-G-T | ** | ||||||||
11651245-T-C | ** | ||||||||
11652861-A-T | ** | ||||||||
11656944-A-G | ** | ||||||||
11668624-A-G | ** | ||||||||
11675087-G-T | ** | ||||||||
13871301-C-A | 11750595-C-A | ** | |||||||
13884628-T-C | 11763922-T-C | ** | |||||||
13890864-C-A | 11770158-C-A | ** | |||||||
13929349-A-G | 11808643-A-G | FTA30776 | ** | ||||||
13938690-G-A | 11817984-G-A | ** | |||||||
13974672-C-A | 11853966-C-A | ** | |||||||
14007252-A-C | 11886546-A-C | ** | |||||||
14035209-C-T | 11914503-C-T | ** | |||||||
14151521-G-C | 12030815-G-C | ** | |||||||
14398232-A-G | 12277528-A-G | ** | |||||||
14398424-A-G | 12277720-A-G | ** | |||||||
14404898-GC-G | 12284195-GC-G | ** | |||||||
14483657-C-A | 12362926-C-A | ** | |||||||
14492830-C-A | 12381027-C-A | ** | |||||||
14518921-CT-C | 12407122-CT-C | ** | |||||||
14560666-C-A | 12448867-C-A | ** | |||||||
14562382-C-A | 12450582-C-A | ** | |||||||
14567094-A-G | 12455294-A-G | ** | |||||||
14620207-A-G | 12508405-A-G | ** | |||||||
14673411-G-T | 12561477-G-T | ** | |||||||
14693585-T-C | 12581651-T-C | ** | |||||||
14757623-G-A | 12645692-G-A | ** | |||||||
14785079-G-A | 12673149-G-A | ** | |||||||
14933677-TCCTGCCTCAGCCTC-T | 12821742-TCCTGCCTCAGCCTC-T | ** | |||||||
14985166-A-T | 12873234-A-T | ** | |||||||
15106524-C-A | 12994612-C-A | ** | |||||||
15109635-G-A | 12997722-G-A | ** | |||||||
15168137-A-T | 13056223-A-T | ** | |||||||
15210849-G-T | 13098935-G-T | ** | |||||||
15210965-G-T | 13099051-G-T | ** | |||||||
15347056-C-A | 13235175-C-A | ** | |||||||
15368653-C-A | 13256773-C-A | ** | |||||||
15452190-C-A | 13340310-C-A | ** | |||||||
15635894-A-G | 13524014-A-G | Y68589 | ** | ||||||
15788291-C-A | 13676411-C-A | ** | |||||||
15931767-G-T | 13819887-G-T | ** | |||||||
15943016-A-G | 13831136-A-G | ** | |||||||
16003932-C-A | 13892052-C-A | ** | |||||||
16028514-A-T | 13916634-A-T | ** | |||||||
16046850-A-G | 13934970-A-G | ** | |||||||
16050297-C-A | 13938417-C-A | ** | |||||||
16052343-G-A | 13940463-G-A | ** | |||||||
16172059-A-G | 14060179-A-G | ** | |||||||
16179641-C-A | 14067761-C-A | ** | |||||||
16179738-T-C | 14067858-T-C | ** | |||||||
16241630-G-A | 14129750-G-A | ** | |||||||
16426935-A-G | 14315055-A-G | BY38252 | FT175856 | ** | |||||
16430453-G-A | 14318573-G-A | Y69886 | ** | ||||||
16507048-A-G | 14395168-A-G | ** | |||||||
16623267-G-T | 14511387-G-T | ** | |||||||
16677520-C-A | 14565640-C-A | ** | |||||||
16843072-C-A | 14731192-C-A | ** | |||||||
16905746-C-A | 14793866-C-A | ** | |||||||
17285081-C-A | 15173201-C-A | ** | |||||||
17306279-G-A | 15194399-G-A | ** | |||||||
17465035-C-A | 15353155-C-A | ** | |||||||
17564929-G-T | 15453049-G-T | ** | |||||||
17707373-TC-T | 15595493-TC-T | ** | |||||||
17715396-C-T | 15603516-C-T | Y72211 | ** | ||||||
17828503-G-T | 15716623-G-T | ** | |||||||
17885666-G-A | 15773786-G-A | Y72565 | ** | ||||||
18079550-C-A | 15967670-C-A | ** | |||||||
18196049-G-T | 16084169-G-T | ** | |||||||
18284536-C-A | 16172656-C-A | P6_Prx | ** | ||||||
18728979-C-A | 16617099-C-A | ** | |||||||
18738247-T-C | 16626367-T-C | ** | |||||||
18806048-T-C | 16694168-T-C | MF1622 | ** | ||||||
18933766-C-A | 16821886-C-A | ** | |||||||
18934062-A-G | 16822182-A-G | FTA46358 | ** | ||||||
19014027-G-A | 16902147-G-A | ** | |||||||
19021617-C-A | 16909737-C-A | ** | |||||||
19084703-C-A | 16972823-C-A | ** | |||||||
19126374-C-T | 17014494-C-T | ** | |||||||
19235328-C-A | 17123448-C-A | ** | |||||||
19256347-T-G | 17144467-T-G | ** | |||||||
19302105-A-G | 17190225-A-G | ** | |||||||
19510114-G-T | 17398234-G-T | FT140265 | ** | ||||||
19510300-A-TTT | 17398420-A-TTT | ** | |||||||
20046606-A-G | 17934726-A-G | P5_Prx | ** | ||||||
21092217-A-G | 18930331-A-G | ** | |||||||
21127531-C-G | 18965645-C-G | ** | |||||||
21172062-C-A | 19010176-C-A | ** | |||||||
21340238-T-C | 19178352-T-C | ** | |||||||
21368796-T-A | 19206910-T-A | ** | |||||||
21409122-T-C | 19247236-T-C | ** | |||||||
21476296-A-G | 19314410-A-G | ** | |||||||
21554437-C-A | 19392551-C-A | ** | |||||||
21915771-A-G | 19753885-A-G | ** | |||||||
21921940-G-C | 19760054-G-C | ** | |||||||
21949103-G-C | 19787217-G-C | ** | |||||||
22128782-A-T | 19966896-A-T | ** | |||||||
22292701-A-T | 20130815-A-T | DYZ19 | ** | ||||||
22292710-G-A | 20130824-G-A | DYZ19 | ** | ||||||
22536898-A-T | 20375012-A-T | ** | |||||||
22548287-C-A | 20386401-C-A | ** | |||||||
22690476-G-T | 20528590-G-T | ** | |||||||
22690522-G-T | 20528636-G-T | ** | |||||||
22851465-A-G | 20689579-A-G | ** | |||||||
22950222-A-T | 20788336-A-T | ** | |||||||
22997808-C-A | 20835922-C-A | ** | |||||||
23052569-A-G | 20890683-A-G | ** | |||||||
23091622-C-A | 20929736-C-A | ** | |||||||
23143093-T-C | 20981207-T-C | ** | |||||||
23259164-C-A | 21097278-C-A | ** | |||||||
23439942-T-C | 21278056-T-C | ** | |||||||
23790309-A-G | 21628423-A-G | ** | |||||||
21780324-C-A | ** | ||||||||
24404878-C-A | 22258731-C-A | ** | |||||||
24407610-G-T | 22261463-G-T | ** | |||||||
24759056-A-T | 22612909-A-T | P3_b2 | ** | ||||||
25587117-T-A | 23440970-T-A | P1_gr1 | ** | ||||||
25885748-GGGAA-G | 23739601-GGGAA-G | P1_Y1 | 4×GGAA | ** | |||||
26100759-C-T | 23954612-C-T | P1_Y1 | ** | ||||||
26248944-G-A | 24102797-G-A | P1_Y1 | ** | ||||||
28522669-C-A | 26376522-C-A | ** | |||||||
28535592-C-A | 26389445-C-A | ** | |||||||
28631314-A-T | 26485167-A-T | ** | |||||||
28729328-T-A | 26583181-T-A | ** | |||||||
56842330-G-A | ** | ||||||||
14506-G-T | ** | ||||||||
9959861-A-T | 10122252-A-T | *** | |||||||
20632502-GA-G | 18470616-GA-G | P4_Prx | 11×A | *** | |||||
9222596-C-G | 9384987-C-G | *** | |||||||
13139531-CGTTCT-C | 10629017-CGTTCT-C | *** | |||||||
9361192-CAA-C,CAC | 9523583-CAA-C,CAC | *** | |||||||
2804010-A-G | 2935969-A-G | *** | |||||||
7460234-A-G | 7592193-A-G | BY53431 | IR1_L | *** | |||||
22229378-C-A | 20067492-C-A | DYZ19 | *** | ||||||
22287819-C-A,G | 20125933-C-A,G | DYZ19 | *** | ||||||
25240293-C-G | 23094146-C-G | P2_r1 | *** | ||||||
18564316-CTTTTTT-C | 16452436-CTTTTTT-C | 19×T | *** | ||||||
6807715-C-T | 6939674-C-T | Y82587 | *** | ||||||
15620232-C-A | 13508352-C-A | *** | |||||||
10796665-T-G | *** | ||||||||
10673941-TGCACC-T,TCCACT | *** | ||||||||
19382389-C-A | 17270509-C-A | *** | |||||||
10760689-A-T | *** | ||||||||
15940520-CTTT-C | 13828640-CTTT-C | 12×T | *** | ||||||
4521787-C-A | 4653746-C-A | *** | |||||||
10964364-C-A | *** | ||||||||
7361989-C-T | 7493948-C-T | *** | |||||||
10024119-C-A | 10186510-C-A | *** | |||||||
11004522-G-T | *** | ||||||||
4862536-C-A | 4994495-C-A | *** | |||||||
10973944-A-C | *** | ||||||||
3332141-C-A | 3464100-C-A | *** | |||||||
3834769-T-C | 3966728-T-C | *** | |||||||
4919958-C-A | 5051917-C-A | *** | |||||||
5586866-C-T | 5718825-C-T | *** | |||||||
7885339-C-A | 8017298-C-A | *** | |||||||
8344101-C-A | 8476060-C-A | *** | |||||||
8822660-A-T | 8954619-A-T | *** | |||||||
9371484-A-G | 9533875-A-G | *** | |||||||
9498826-C-A | 9661217-C-A | *** | |||||||
10024191-G-A | 10186582-G-A | *** | |||||||
10669619-G-T | *** | ||||||||
10973982-C-A | *** | ||||||||
11019456-CTCCAC-C,CTCCAT | *** | ||||||||
13494163-C-A | 11338487-C-A | *** | |||||||
11666162-GGAATC-G | *** | ||||||||
14081351-C-A | 11960645-C-A | *** | |||||||
14286784-CTTTTTTT-C,CTT | 12166078-CTTTTTTT-C,CTT | 22×T | *** | ||||||
16412976-G-T | 14301096-G-T | *** | |||||||
16427523-C-A | 14315643-C-A | *** | |||||||
19223168-C-A | 17111288-C-A | *** | |||||||
19564488-T-A | 17452608-T-A | *** | |||||||
22430117-G-A | 20268231-G-A | DYZ19 | *** | ||||||
24415718-T-A | 22269571-T-A | A3522 | 31×TA | *** | |||||
25088482-C-A | 22942335-C-A | g1 | *** | ||||||
28665170-C-A | 26519023-C-A | *** | |||||||
56862633-TTT-G,TG | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.