Hjelt

FTDNA: 377534, BigY2: 377534

Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > ZZ40 > S21184 > S19290 > S16785 > Y16854 > BY3276 > Y16856 > BY33251 > BY3280

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
377534		BigY2
377534
17012775-A-G 14900895-A-G Y97949 YY++
22764438-G-A 20602552-G-A BY140645 YY++
28788917-C-T 26642770-C-T Y113493 ++
2817709-C-CA 2949668-C-CA 30×A**
19095208-G-A 16983328-G-A **
10774743-C-G **
10775863-T-C **
10775889-C-G **
10778184-T-C **
19058120-C-A 16946240-C-A **
19067935-C-A 16956055-C-A **
19062064-C-A 16950184-C-A **
19271976-C-A 17160096-C-A **
10793040-C-A **
10798619-C-T **
10803150-C-A **
19155605-G-T 17043725-G-T **
10755226-C-T **
10830314-G-T **
19463162-G-C 17351282-G-C **
9732910-A-AG 9895301-A-AG IR3_Prx **
9849780-T-C 10012171-T-C **
19551682-C-A 17439802-C-A **
9873794-C-A 10036185-C-A **
9927491-G-T 10089882-G-T **
9935940-C-A 10098331-C-A **
10012448-T-C 10174839-T-C **
10691308-A-G **
10015973-GA-G 10178364-GA-G **
10062750-A-T 10225141-A-T **
10657551-A-G **
19304610-C-A 17192730-C-A **
19302248-C-A 17190368-C-A **
10686035-C-A **
10689528-C-A **
10824785-CTCCAT-C **
10850571-A-C **
20840277-C-A 18678391-C-A P4_Gap **
10974317-C-A **
10955303-C-A **
10955345-C-T **
10957961-C-G **
10962789-A-G **
10962796-T-G **
18923979-CAAAG-C 16812099-CAAAG-C **
10978762-C-A **
10951029-T-A **
18876204-A-G 16764324-A-G **
10990102-A-C **
10993238-C-G **
10993247-C-T **
10993253-T-C **
10993259-AC-A **
10951055-G-T **
10951027-A-G **
19024859-T-A 16912979-T-A **
10883552-C-T **
10874376-C-A **
10874689-G-T **
10875938-C-A **
10876962-C-A **
10879811-T-A **
10883541-C-T **
10887511-G-T **
10935155-C-T **
10888416-C-A **
10892890-C-A **
10900340-C-A **
10925298-T-G **
18981222-T-C 16869342-T-C **
10928840-A-T **
10928940-A-T **
20673745-G-C 18511859-G-C P4_Prx **
21115624-C-T 18953738-C-T **
21110059-G-T 18948173-G-T **
6839709-G-C 6971668-G-C **
6647426-C-G 6779385-C-G **
6664399-GTTATTTT-G 6796358-GTTATTTT-G **
6744594-A-G 6876553-A-G **
6751936-G-A 6883895-G-A **
6828315-T-C 6960274-T-C **
6828324-A-C 6960283-A-C **
6862201-A-G 6994160-A-G **
6436539-T-A 6568498-T-A **
6888492-G-A 7020451-G-A **
6956487-C-A 7088446-C-A **
6995114-T-C 7127073-T-C **
7045811-C-A 7177770-C-A **
21482847-C-A 19320961-C-A **
7166871-A-T 7298830-A-T **
6577128-A-G 6709087-A-G **
21550146-C-A 19388260-C-A **
7223397-T-C 7355356-T-C **
5660161-C-A 5792120-C-A **
5123088-C-A 5255047-C-A **
5212629-A-T 5344588-A-T **
5408251-G-T 5540210-G-T **
5506295-C-A 5638254-C-A **
5526514-A-G 5658473-A-G **
5647755-T-A 5779714-T-A **
5809056-G-A 5941015-G-A FT80638 **
6384671-T-C 6516630-T-C **
5845854-G-T 5977813-G-T **
5858157-G-T 5990116-G-T **
5937300-C-A 6069259-C-A **
6000742-G-T 6132701-G-T **
6103925-G-T 6235884-G-T **
6231190-A-G 6363149-A-G IR3_Dst **
21482843-A-G 19320957-A-G **
7223405-T-C 7355364-T-C **
9461012-G-T 9623403-G-T **
21282685-C-A 19120799-C-A **
21394565-G-C 19232679-G-C **
8213952-C-G 8345911-C-G **
21283050-C-A 19121164-C-A **
8658961-C-A 8790920-C-A **
8677003-C-A 8808962-C-A **
8725348-T-C 8857307-T-C **
8737964-T-A 8869923-T-A **
21443556-T-G 19281670-T-G **
8831186-C-A 8963145-C-A **
9022983-G-T 9185374-G-T **
9025118-T-A 9187509-T-A **
9403151-A-T 9565542-A-T **
21134867-C-A 18972981-C-A **
10993274-AAACCC-A **
8094873-T-A 8226832-T-A **
8008933-G-A 8140892-G-A **
7224858-G-A 7356817-G-A **
21457736-G-T 19295850-G-T **
7236477-C-A 7368436-C-A **
7286783-G-A 7418742-G-A **
7298367-A-C 7430326-A-C **
7391239-A-G 7523198-A-G **
7461845-A-T 7593804-A-T IR1_L **
21482835-T-G 19320949-T-G **
7608438-T-C 7740397-T-C **
7938779-A-C 8070738-A-C **
7623439-T-A 7755398-T-A 14×A**
7633162-G-A 7765121-G-A **
7721530-C-A 7853489-C-A **
7756173-C-T 7888132-C-T **
7861717-A-G 7993676-A-G **
7873794-C-T 8005753-C-T **
10993263-C-CA **
10993306-C-T **
10993295-C-A **
15874178-G-T 13762298-G-T **
15669839-A-G 13557959-A-G **
15669853-G-A 13557973-G-A **
15669867-G-A 13557987-G-A **
18106726-G-T 15994846-G-T **
15706993-C-A 13595113-C-A **
15844630-G-A 13732750-G-A **
15898826-C-A 13786946-C-A **
15669831-G-A 13557951-G-A **
15906385-G-A 13794505-G-A **
15967471-C-A 13855591-C-A **
16004450-G-T 13892570-G-T **
18106711-T-C 15994831-T-C **
18106678-G-C 15994798-G-C **
16171315-G-A 14059435-G-A **
15669832-T-C 13557952-T-C **
15662821-C-A 13550941-C-A **
16233281-C-A 14121401-C-A **
15447038-G-A 13335158-G-A **
14977438-C-A 12865513-C-A **
15200131-C-A 13088217-C-A **
15269555-T-C 13157644-T-C **
15305726-C-A 13193825-C-A **
15338793-A-T 13226911-A-T **
15342476-A-G 13230595-A-G **
15456849-A-G 13344969-A-G **
15650570-C-G 13538690-C-G **
18569814-C-A 16457934-C-A **
15532578-TA-T 13420698-TA-T **
15564141-T-A 13452261-T-A **
18340534-C-T 16228654-C-T P6_Prx **
15623230-G-T 13511350-G-T **
15623428-CA-C 13511548-CA-C **
16184378-G-C 14072498-G-C **
16243132-C-A 14131252-C-A **
14965436-C-A 12853511-C-A **
17580236-C-T 15468356-C-T **
17267162-G-A 15155282-G-A **
17397253-A-ATTT 15285373-A-ATTT 16×T**
17475190-C-T 15363310-C-T **
17478346-GA-G 15366466-GA-G **
17486298-G-T 15374418-G-T **
17551872-C-T 15439992-C-T **
17596437-C-A 15484557-C-A **
17196656-A-G 15084776-A-G Y98443 **
17646840-A-AAGGTGATCCCTTGTAATCCC 15534960-A-AAGGTGATCCCTTGTAATCCC **
17653809-G-A 15541929-G-A **
17717229-C-A 15605349-C-A **
17832487-A-T 15720607-A-T **
17850153-C-A 15738273-C-A **
17854503-G-C 15742623-G-C **
17203546-T-G 15091666-T-G **
17157498-A-C 15045618-A-C **
16275348-C-A 14163468-C-A **
16755000-C-A 14643120-C-A **
16319671-TTCCCC-T 14207791-TTCCCC-T **
16409138-C-A 14297258-C-A **
16474828-A-T 14362948-A-T **
16568047-C-A 14456167-C-A **
16616056-C-A 14504176-C-A **
16738562-C-T 14626682-C-T **
16874936-C-A 14763056-C-A **
17093751-C-G 14981871-C-G **
16938668-C-A 14826788-C-A **
17922460-A-G 15810580-A-G **
17014739-A-T 14902859-A-T **
17032650-G-C 14920770-G-C **
17042719-T-C 14930839-T-C **
17072726-C-A 14960846-C-A **
14966472-T-A 12854547-T-A **
14960151-G-T 12848226-G-T **
10993300-C-T **
14054130-C-A 11933424-C-A **
13889703-G-T 11768997-G-T **
13935983-G-T 11815277-G-T **
13937031-A-G 11816325-A-G **
14030875-T-C 11910169-T-C **
18630574-G-T 16518694-G-T **
14042643-G-A 11921937-G-A **
14068321-C-A 11947615-C-A **
11671660-A-G **
14080079-T-C 11959373-T-C **
14204985-A-C 12084279-A-C **
14205035-A-T 12084329-A-T **
14241751-T-C 12121045-T-C **
14247600-A-G 12126894-A-G **
14267142-C-A 12146436-C-A **
13886009-C-A 11765303-C-A **
11667783-C-A **
14300608-G-A 12179902-G-A **
13226625-C-T 11070949-C-T **
4872744-C-T 5004703-C-T **
10993307-C-CA **
13206332-A-T 11050656-A-T **
13209626-C-G 11053950-C-G **
18748897-C-A 16637017-C-A **
13226233-G-T 11070557-G-T **
13299388-C-A 11143712-C-A **
11648745-G-C **
13315760-C-A 11160084-C-A **
13348046-G-T 11192370-G-T **
18659985-A-C 16548105-A-C **
13484694-G-C 11329018-G-C **
13490427-T-G 11334751-T-G **
13491036-G-A 11335360-G-A **
14272526-T-G 12151820-T-G **
14311671-T-A 12190965-T-A **
14925905-C-T 12813970-C-T **
14700955-G-A 12589021-G-A **
14688518-T-C 12576584-T-C **
14700857-C-T 12588923-C-T **
14700858-T-C 12588924-T-C **
14700861-GA-G 12588927-GA-G **
14700869-A-C 12588935-A-C **
14700872-G-C 12588938-G-C **
14715486-C-A 12603553-C-A **
14678013-G-T 12566079-G-T **
14717380-C-T 12605448-C-T **
14722498-T-C 12610566-T-C **
14769306-G-A 12657375-G-A **
14769311-C-T 12657380-C-T **
14822380-A-T 12710447-A-T **
14908474-G-T 12796541-G-T **
14684710-A-C 12572776-A-C **
14639180-C-G 12527249-C-G **
14314301-C-A 12193595-C-A **
14460042-A-G 12339315-A-G **
14341941-C-T 12221236-C-T **
14341943-G-A 12221238-G-A **
14341945-G-A 12221240-G-A **
14342102-G-A 12221397-G-A **
14364176-C-A 12243471-C-A **
14365434-C-A 12244729-C-A Y91207 **
14472842-CA-C 12352111-CA-C **
14639178-C-T 12527247-C-T **
14475963-T-A 12355232-T-A **
14475981-T-G 12355250-T-G **
14502345-T-C 12390550-T-C **
14580975-C-A 12469175-C-A **
14582400-C-A 12470600-C-A **
14639172-A-G 12527241-A-G **
17885739-G-T 15773859-G-T **
4902858-T-A 5034817-T-A **
21651791-GC-G 19489905-GC-G **
10925328-C-G **
14340806-AT-A 12220101-AT-A **
24378696-C-A 22232549-C-A **
23825653-C-A 21663767-C-A **
11013180-G-T **
10774049-C-A **
6347777-GGAAAGAAA-G 6479736-GGAAAGAAA-G 9×GAAA**
13461137-G-T 11305461-G-T **
13859407-A-T 11738701-A-T **
13461149-GAT-G 11305473-GAT-G **
14080110-C-A 11959404-C-A **
16478195-C-A 14366315-C-A **
17864201-C-A 15752321-C-A **
10960216-C-A **
23778145-A-G 21616259-A-G **
10755229-A-T **
10676856-A-C **
13859390-G-A 11738684-G-A **
10631249-C-A **
20440398-G-GTTC 18278512-G-GTTC P5_Dst **
28773910-G-GA 26627763-G-GA 8×A**
24890224-A-AT 22744077-A-AT g1 13×T**
10951077-A-C **
5359007-C-A 5490966-C-A **
19023221-C-A 16911341-C-A **
10631259-C-CA **
10752413-C-T **
10631260-CA-C **
10631286-A-G **
10631292-T-TTTGAA **
15593274-C-A 13481394-C-A 23×A**
21219748-C-A 19057862-C-A **
10985268-CCAT-C **
15312467-C-A 13200572-C-A **
10744678-C-A **
24508337-C-A 22362190-C-A **
56843779-T-C **
22032632-C-A 19870746-C-A **
23509060-C-T 21347174-C-T **
17475186-C-T 15363306-C-T **
56699862-A-T **
7001583-G-A 7133542-G-A **
56843776-G-A **
15057317-T-G 12945409-T-G **
10759820-C-A **
23398249-G-T 21236363-G-T **
10951078-T-C **
15669852-T-C 13557972-T-C **
23343631-C-A 21181745-C-A **
6455990-C-A 6587949-C-A **
4792236-G-T 4924195-G-T **
18738154-A-T 16626274-A-T **
10759782-CTCCAT-C **
28499949-C-A 26353802-C-A **
18994492-T-A 16882612-T-A **
14238458-C-A 12117752-C-A **
19231343-TG-T 17119463-TG-T **
4443534-C-A 4575493-C-A **
10925326-T-C **
10985246-T-A **
23773524-C-A 21611638-C-A **
10955318-T-C **
19733428-G-T 17621548-G-T P5_Prx **
10759824-C-A **
23648339-C-A 21486453-C-A **
21994050-C-A 19832164-C-A **
8987292-C-A 9149683-C-A **
23591013-C-G 21429127-C-G **
7359285-C-A 7491244-C-A **
24405903-G-T 22259756-G-T **
10762995-C-CACTG **
10862475-T-G **
28592631-T-C 26446484-T-C **
28623240-G-A 26477093-G-A **
7886488-T-A 8018447-T-A Z5254Z5254 **
9825016-C-T 9987407-C-T M6908 **
18443538-C-T 16331658-C-T P6_Dst **
28621413-C-A 26475266-C-A **
28611668-G-A 26465521-G-A **
28536176-T-C 26390029-T-C **
28643020-T-C 26496873-T-C **
13468928-G-T 11313252-G-T **
28520733-C-A 26374586-C-A **
28514866-T-G 26368719-T-G **
28504365-TTTCATAATTATTCATCATA-T 26358218-TTTCATAATTATTCATCATA-T **
58988466-T-C 56842319-T-C **
28485335-C-A 26339188-C-A **
16090323-C-A 13978443-C-A **
28679427-T-A 26533280-T-A **
27610069-C-T 25463922-C-T P1_Y2 **
25201082-G-A 23054935-G-A g1 **
56874918-C-G **
56867500-T-TA **
56867499-T-A **
56867485-A-ATG **
56867463-A-G **
20332111-C-CA 18170225-C-CA P5_Dst 30×A**
7832170-C-CTT 7964129-C-CTT 12×TCTT**
22473407-AG-A 20311521-AG-A Y1971 DYZ19 **
26273429-C-T 24127282-C-T FGC38651 P1_Y1 **
17545608-T-G 15433728-T-G CTS7585 ****
22476252-A-G 20314366-A-G BY45666 DYZ19 **
10022971-C-A 10185362-C-A **
8109742-ATACTAC-A 8241701-ATACTAC-A 12×TAC**
24585689-G-GAA 22439542-G-GAA P3_t2 10×A**
27982171-T-TTA 25836024-T-TTA P1_Y2 **
27610062-T-G 25463915-T-G P1_Y2 **
10762991-C-A **
56699861-G-A **
7430403-C-A 7562362-C-A **
17158997-G-T 15047117-G-T **
10752341-C-A **
10752350-T-A **
10752351-CTCCAT-C **
56699848-A-G **
25521497-A-G 23375350-A-G P1_gr1 **
17475180-G-A 15363300-G-A **
11001381-C-A **
11001389-T-A **
21030992-GT-G 18869106-GT-G P4_Dst **
10788228-T-C **
25137979-C-A 22991832-C-A g1 **
10762984-TCCCC-T **
11000355-C-A **
26124133-A-C 23977986-A-C P1_Y1 **
27610055-T-A 25463908-T-A P1_Y2 **
13859401-A-C 11738695-A-C **
17475148-T-G 15363268-T-G **
17475155-G-A 15363275-G-A **
17475156-A-G 15363276-A-G **
13480371-G-A 11324695-G-A **
22185855-CTTTT-C 20023969-CTTTT-C 25×T**
26153867-A-T 24007720-A-T P1_Y1 **
26153840-C-T 24007693-C-T P1_Y1 **
15289997-C-A 13178096-C-A **
16411990-C-A 14300110-C-A **
10759829-C-T **
10814463-T-TATTCCATTCC **
13487710-C-A 11332034-C-A **
17374478-GA-G 15262598-GA-G **
56843774-G-A **
10862471-C-A **
10862470-C-G **
10862484-A-C **
10796598-G-T **
23848777-G-T 21686891-G-T **
8676966-C-A 8808925-C-A **
7131265-C-A 7263224-C-A **
10776300-C-A **
23398144-C-A 21236258-C-A **
21410247-C-A 19248361-C-A **
21899625-C-A 19737739-C-A **
5060918-G-T 5192877-G-T **
18088459-C-A 15976579-C-A **
10835241-C-A **
6295515-T-TG 6427474-T-TG IR3_Dst **
21926507-A-T 19764621-A-T **
10925278-T-G **
11663416-C-A **
28781360-C-A 26635213-C-A **
14808557-C-A 12696628-C-A **
19415804-C-A 17303924-C-A **
56728181-T-C **
22235166-G-T 20073280-G-T DYZ19 **
22209238-T-C 20047352-T-C **
7169831-C-A 7301790-C-A **
27546742-CTTTTT-C 25400595-CTTTTT-C P1_Y2 19×T**
10796163-G-C **
21308799-C-A 19146913-C-A **
18443540-C-T 16331660-C-T FT252225 P6_Dst **
9991358-C-A 10153749-C-A **
9753923-G-A 9916314-G-A FGC15405 **
7028691-C-A 7160650-C-A FT86537 **
22205641-C-A 20043755-C-A **
9140132-C-A 9302523-C-A **
21951968-C-A 19790082-C-A **
8762060-C-A 8894019-C-A **
15177366-C-A 13065452-C-A **
10673436-C-A **
4439924-C-A 4571883-C-A **
3962682-T-C 4094641-T-C **
4093568-C-A 4225527-C-A **
4177779-G-T 4309738-G-T **
4241419-G-T 4373378-G-T **
21700619-A-C 19538733-A-C **
4340364-G-T 4472323-G-T **
4563351-A-T 4695310-A-T **
3683876-G-A 3815835-G-A **
4626385-T-C 4758344-T-C **
4649187-G-C 4781146-G-C **
4700754-C-A 4832713-C-A **
4764875-G-T 4896834-G-T **
4764922-G-T 4896881-G-T FT120777 **
4781823-C-T 4913782-C-T **
3954617-C-A 4086576-C-A **
3672696-G-T 3804655-G-T **
7623583-C-T 7755542-C-T **
3285878-C-T 3417837-C-T **
2681127-C-A 2813086-C-A **
2859199-A-G 2991158-A-G **
2859203-C-G 2991162-C-G **
2914955-C-A 3046914-C-A **
2914956-T-C 3046915-T-C **
3146751-T-C 3278710-T-C **
3296340-C-T 3428299-C-T **
3627848-C-A 3759807-C-A **
3359856-G-T 3491815-G-T **
3421227-C-A 3553186-C-A **
3502743-G-T 3634702-G-T **
3550645-C-T 3682604-C-T **
3620740-T-C 3752699-T-C **
3622303-G-A 3754262-G-A **
10862489-C-T **
56728157-C-T **
2706712-C-A 2838671-C-A **
13248502-G-A 11092826-G-A **
23459582-C-A 21297696-C-A **
22885962-C-A 20724076-C-A **
21182388-T-A 19020502-T-A **
56849076-T-C **
14348105-AT-A 12227400-AT-A 8×T**
22903794-A-ATG 20741908-A-ATG **
9937596-C-A 10099987-C-A **
23004924-C-G 20843038-C-G **
23047743-A-C 20885857-A-C **
23055289-T-C 20893403-T-C **
19448315-C-A 17336435-C-A **
10973178-G-T **
5866935-C-A 5998894-C-A **
15612215-CAT-C 13500335-CAT-C **
15665687-C-A 13553807-C-A **
16648159-C-A 14536279-C-A **
21555277-C-A 19393391-C-A **
5410589-G-T 5542548-G-T **
23252549-G-T 21090663-G-T **
10993255-C-T FT80288 **
10955326-CACCCT-C **
10955315-C-A **
10955312-A-C **
10955288-C-T **
5103789-G-T 5235748-G-T **
21497594-G-T 19335708-G-T **
7572827-T-C 7704786-T-C **
21133542-G-A 18971656-G-A **
11005569-C-A **
28519629-C-A 26373482-C-A **
6630531-A-T 6762490-A-T **
22662522-A-C 20500636-A-C **
18873406-C-A 16761526-C-A **
14700838-G-A 12588904-G-A **
14700837-T-C 12588903-T-C **
56836561-C-A **
22303531-T-C 20141645-T-C DYZ19 **
13214531-C-A 11058855-C-A **
17981913-C-A 15870033-C-A **
13671543-G-A 11515867-G-A **
56843750-C-G **
19517960-C-T 17406080-C-T **
56728146-T-C **
22472633-C-T 20310747-C-T BY37290 DYZ19 **
22644903-G-T 20483017-G-T **
3274275-C-A 3406234-C-A **
2763773-CAAAAA-C 2895732-CAAAAA-C 20×A**
17318810-C-A 15206930-C-A **
9440212-C-A 9602603-C-A **
14021516-C-A 11900810-C-A **
7409412-C-A 7541371-C-A **
23475756-T-C 21313870-T-C **
24310306-CATAT-C 22164159-CATAT-C P3_t1 8×AT**
3848674-C-A 3980633-C-A **
18779397-C-A 16667517-C-A **
17863438-C-G 15751558-C-G **
22529897-C-A 20368011-C-A **
23577040-A-G 21415154-A-G ***
22218865-G-T 20056979-G-T DYZ19 ***
56879894-TTC-T,TT ***
21616709-C-T 19454823-C-T ***
18617595-C-A 16505715-C-A ***
23342075-C-A 21180189-C-A ***
17945352-C-A 15833472-C-A ***
22633969-C-A 20472083-C-A ***
22690114-G-T 20528228-G-T ***
19293938-C-G 17182058-C-G ***
19248029-C-A 17136149-C-A ***
23579187-A-T 21417301-A-T ***
56840983-A-AT ***
21515926-A-T 19354040-A-T YP298 ***
22896119-C-A 20734233-C-A ***
22605290-A-G 20443404-A-G ***
19340659-C-A 17228779-C-A ***
23076133-C-A 20914247-C-A ***
22893293-A-T 20731407-A-T ***
8156002-C-A 8287961-C-A ***
16964260-GAA-G,GA 14852380-GAA-G,GA 15×A***
23741931-C-A 21580045-C-A ***
10892529-A-T ***
13489134-G-A 11333458-G-A ***
19007641-C-A 16895761-C-A ***
9765473-C-A 9927864-C-A ***
10755272-C-A ***
22829644-C-CAA 20667758-C-CAA 18×A***
21426020-CAA-C 19264134-CAA-C 12×A***
21677586-C-A 19515700-C-A ***
2960062-CAAAAAA-C 3092021-CAAAAAA-C 17×A***
13494306-C-A 11338630-C-A ***
14481679-GA-G 12360948-GA-G 9×A***
22991363-C-A 20829477-C-A ***
10799437-A-C,T ***
8704030-CTTT-C 8835989-CTTT-C 13×T***
10687301-A-G,T ***
13194028-C-T 11038352-C-T ***
15277519-C-A 13165608-C-A ***
7867879-G-GGAAA,GGAAAGAAA 7999838-G-GGAAA,GGAAAGAAA 16×GAAA***
4447486-C-A 4579445-C-A ***
22066312-C-A 19904426-C-A ***
10974006-C-A ***
10974001-T-A ***
10925349-C-A ***
14992938-C-A 12881023-C-A ***
9029736-CTTTTT-C 9192127-CTTTTT-C 16×T***
10755296-T-G ***
13456626-C-G 11300950-C-G ***
23475226-ATC-A 21313340-ATC-A ***
13140545-C-T 10630031-C-T ***
21815962-A-AT 19654076-A-AT 11×T***
13678610-C-A 11522934-C-A ***
13678613-C-G 11522937-C-G ***
13678670-A-T 11522994-A-T ***
13487976-G-A 11332300-G-A ***
23256605-T-TA 21094719-T-TA 11×A***
9962356-C-G 10124747-C-G ***
25171019-G-A 23024872-G-A g1 ***
13860285-G-A 11739579-G-A ***
22477901-A-C 20316015-A-C DYZ19 ***
58993961-C-T 56847814-C-T ***
10921138-T-C ***
18806044-CTTTTTTT-C 16694164-CTTTTTTT-C 19×T***
13868598-CA-C,CT 11747892-CA-C,CT ***
13449590-T-TC 11293914-T-TC ***
13940136-CAA-C 11819430-CAA-C 4×AATA***
13457663-A-G,T 11301987-A-G,T ***
13453613-CTTTTA-C,GTGTTA 11297937-CTTTTA-C,GTGTTA ***
6144430-CAA-C 6276389-CAA-C IR3_Dst 13×A***
13405058-C-G 11249382-C-G ***
14875592-GTT-G 12763662-GTT-G 28×T***
22973887-T-A 20812001-T-A ***
16716895-AT-A 14605015-AT-A 9×T***
11664951-C-A ***
16265102-AT-A 14153222-AT-A 9×T***
16875004-T-G 14763124-T-G ***
10851429-A-T ***
10023948-G-A 10186339-G-A ***
10662236-C-A ***
10668826-C-A ***
10755234-C-T ***
10755248-ACTCCC-A,ACTCCA ***
10755450-T-TCC,TCCATT ***
10761273-C-G ***
10789936-C-G ***
10789943-A-G ***
10789951-C-T ***
10789955-T-G ***
10925336-T-A ***
9858217-C-A 10020608-C-A ***
10971009-C-A ***
10985078-C-A ***
13219640-A-T 11063964-A-T ***
13456619-T-C 11300943-T-C ***
14036978-C-A 11916272-C-A ***
14824019-T-C 12712086-T-C ***
15476020-A-AC 13364140-A-AC ***
15618260-T-A 13506380-T-A ***
15690096-C-A 13578216-C-A ***
16045239-C-A 13933359-C-A ***
16170395-T-C 14058515-T-C ***
9979923-C-A 10142314-C-A ***
9644241-C-T 9806632-C-T IR3_Prx ***
6981528-GA-G 7113487-GA-G 10×A***
4968751-A-G 5100710-A-G ***
8117792-TCTC-T 8249751-TCTC-T 5×CTC***
18857575-CTT-C,CTTT 16745695-CTT-C,CTTT 15×T***
3853698-C-A 3985657-C-A ***
7904490-CTT-C 8036449-CTT-C 13×T***
21584020-C-A 19422134-C-A ***
56826039-T-C,G ***
21142834-CA-C,CAA 18980948-CA-C,CAA 16×A***
8289187-C-A 8421146-C-A ***
17940117-C-A 15828237-C-A ***
4243323-C-A 4375282-C-A ***
4862475-G-A 4994434-G-A ***
6429040-CA-C 6560999-CA-C 9×A***
9498953-A-G 9661344-A-G ***
6520261-C-A 6652220-C-A ***
7131822-G-A 7263781-G-A ***
7221754-A-T 7353713-A-T ***
7518493-CAAA-C,CAA 7650452-CAAA-C,CAA 19×A***
7534392-GTTTTTTTTTTTTTGTT-G,GTT 7666351-GTTTTTTTTTTTTTGTT-G,GTT 13×T***
8069929-C-A 8201888-C-A ***
13600223-GATGAC-G 11444547-GATGAC-G ***
8400894-CTTTTTC-C,CT 8532853-CTTTTTC-C,CT ***
8736212-C-A 8868171-C-A ***
9421044-G-T 9583435-G-T ***
9434973-C-A 9597364-C-A ***
9461963-G-T 9624354-G-T ***
56879939-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 3775341028657273898327454812
Kit: 377534919218874897017412410
Used in age calculations1028657274897017454812
Counts of SNPs22
Variant counts last updated 2020-03-16 03:04:23.


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