O'Brien
FTDNA: 449752, BigY2: 449752Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 449752 | BigY2 449752 |
|---|---|---|---|---|---|---|---|---|
| hg19:Y:6191258-A-G hg38:Y:6323217-A-G | IR3_Dst | A* | ||||||
| hg19:Y:8730155-TG-T hg38:Y:8862114-TG-T | + | + | ||||||
| hg19:Y:16223030-C-A hg38:Y:14111150-C-A | BY18176 | Y | Y | + | + | |||
| hg19:Y:16324441-T-C hg38:Y:14212561-T-C | Y13362 | Y | Y | + | + | |||
| hg19:Y:16679731-A-T hg38:Y:14567851-A-T | BY18178 | Y | Y | + | + | |||
| hg19:Y:19296396-T-C hg38:Y:17184516-T-C | Y75063 | Y | Y | + | + | |||
| hg19:Y:21224682-C-T hg38:Y:19062796-C-T | Y76011 | Y | Y | + | + | |||
| hg19:Y:22771194-T-C hg38:Y:20609308-T-C | Y78632 | Y | Y | + | + | |||
| hg19:Y:23332021-C-G hg38:Y:21170135-C-G | Y79706 | Y | Y | + | + | |||
| hg19:Y:8218079-C-T hg38:Y:8350038-C-T | ** | |||||||
| hg19:Y:7306539-GA-G hg38:Y:7438498-GA-G | ** | |||||||
| hg19:Y:23412140-T-G hg38:Y:21250254-T-G | ** | ** | ||||||
| hg19:Y:8762192-G-C hg38:Y:8894151-G-C | ** | |||||||
| hg19:Y:16679422-TA-T hg38:Y:14567542-TA-T | ** | |||||||
| hg19:Y:8181234-C-T hg38:Y:8313193-C-T | ** | |||||||
| hg19:Y:13324762-T-C hg38:Y:11169086-T-C | ** | |||||||
| hg19:Y:4144440-C-A hg38:Y:4276399-C-A | FT319666 | ** | ||||||
| hg19:Y:9013170-G-A hg38:Y:9175561-G-A | A18841 | ** | ||||||
| hg19:Y:9013182-A-C hg38:Y:9175573-A-C | A18842 | ** | ||||||
| hg19:Y:14294068-C-T hg38:Y:12173362-C-T | CTS2406 PF2944 M3518 | ** | ** | |||||
| hg19:Y:26120150-T-C hg38:Y:23974003-T-C | P1_Y1 | 12×TTCC | ** | |||||
| hg19:Y:21409828-A-C hg38:Y:19247942-A-C | PR3244 | ** | ||||||
| hg19:Y:13472214-C-A hg38:Y:11316538-C-A | ** | |||||||
| hg19:Y:17517130-C-A hg38:Y:15405250-C-A | ** | |||||||
| hg19:Y:8181257-G-A hg38:Y:8313216-G-A | ** | |||||||
| hg38:Y:10775989-G-A | ** | |||||||
| hg38:Y:10775992-T-TTCGTC | ** | |||||||
| hg19:Y:21863903-T-G hg38:Y:19702017-T-G | ** | |||||||
| hg19:Y:7243791-C-A hg38:Y:7375750-C-A | ** | |||||||
| hg19:Y:22237672-A-T hg38:Y:20075786-A-T | DYZ19 | ** | ||||||
| hg19:Y:14502493-C-A hg38:Y:12390698-C-A | ** | |||||||
| hg19:Y:15969934-T-G hg38:Y:13858054-T-G | ** | |||||||
| hg19:Y:5761587-C-A hg38:Y:5893546-C-A | ** | |||||||
| hg19:Y:14462690-CT-C hg38:Y:12341963-CT-C | ** | |||||||
| hg38:Y:11005492-C-G | ** | |||||||
| hg19:Y:22230693-A-G hg38:Y:20068807-A-G | DYZ19 | ** | ||||||
| hg19:Y:19146520-C-A hg38:Y:17034640-C-A | ** | |||||||
| hg19:Y:17678655-C-A hg38:Y:15566775-C-A | ** | |||||||
| hg38:Y:56734816-A-C | ** | |||||||
| hg19:Y:5858487-C-A hg38:Y:5990446-C-A | ** | |||||||
| hg38:Y:10827078-G-T | ** | |||||||
| hg38:Y:10827086-T-C | ** | |||||||
| hg38:Y:10994635-G-A | ** | |||||||
| hg38:Y:10775972-T-C | ** | |||||||
| hg19:Y:7152739-C-A hg38:Y:7284698-C-A | ** | |||||||
| hg38:Y:10965338-C-A | ** | |||||||
| hg38:Y:10994632-T-C | ** | |||||||
| hg19:Y:6510258-C-G hg38:Y:6642217-C-G | ** | |||||||
| hg19:Y:13885533-C-A hg38:Y:11764827-C-A | ** | |||||||
| hg19:Y:16602638-CTTTT-C hg38:Y:14490758-CTTTT-C | 15×T | ** | ||||||
| hg19:Y:6771619-C-A hg38:Y:6903578-C-A | ** | |||||||
| hg19:Y:23311253-C-T hg38:Y:21149367-C-T | M7164 | ** | ||||||
| hg19:Y:4926167-G-T hg38:Y:5058126-G-T | ** | |||||||
| hg19:Y:16926145-C-A hg38:Y:14814265-C-A | ** | |||||||
| hg19:Y:23434297-C-A hg38:Y:21272411-C-A | ** | |||||||
| hg19:Y:14219532-G-A hg38:Y:12098826-G-A | ** | |||||||
| hg19:Y:4388486-C-A hg38:Y:4520445-C-A | ** | |||||||
| hg19:Y:16351611-C-A hg38:Y:14239731-C-A | ** | |||||||
| hg19:Y:13643864-G-A hg38:Y:11488188-G-A | ** | |||||||
| hg19:Y:19677904-A-C hg38:Y:17566024-A-C | P5_Prx | ** | ||||||
| hg19:Y:13472181-C-T hg38:Y:11316505-C-T | ** | |||||||
| hg19:Y:22564621-C-A hg38:Y:20402735-C-A | ** | |||||||
| hg19:Y:7021867-C-A hg38:Y:7153826-C-A | ** | |||||||
| hg19:Y:13326145-C-A hg38:Y:11170469-C-A | ** | |||||||
| hg19:Y:23742227-G-T hg38:Y:21580341-G-T | ** | |||||||
| hg19:Y:28673098-C-A hg38:Y:26526951-C-A | ** | |||||||
| hg19:Y:17093682-C-A hg38:Y:14981802-C-A | FTB48787 | ** | ||||||
| hg19:Y:16881593-C-A hg38:Y:14769713-C-A | ** | |||||||
| hg19:Y:14187087-C-A hg38:Y:12066381-C-A | ** | |||||||
| hg19:Y:2689569-A-G hg38:Y:2821528-A-G | ** | |||||||
| hg19:Y:9666706-A-G hg38:Y:9829097-A-G | IR3_Prx | ** | ||||||
| hg19:Y:28778886-G-T hg38:Y:26632739-G-T | ** | |||||||
| hg19:Y:14432042-C-A hg38:Y:12311315-C-A | ** | |||||||
| hg38:Y:10899977-A-T | ** | |||||||
| hg19:Y:23126242-C-A hg38:Y:20964356-C-A | ** | |||||||
| hg19:Y:19079207-C-A hg38:Y:16967327-C-A | ** | |||||||
| hg19:Y:16147491-AGAGAG-A hg38:Y:14035611-AGAGAG-A | P8_Dst | ** | ||||||
| hg19:Y:15786733-C-A hg38:Y:13674853-C-A | ** | |||||||
| hg38:Y:10899963-T-G | ** | |||||||
| hg38:Y:10899973-T-C | ** | |||||||
| hg19:Y:4271425-C-A hg38:Y:4403384-C-A | ** | |||||||
| hg38:Y2:7035-C-G | ** | |||||||
| hg19:Y:4374418-C-A hg38:Y:4506377-C-A | ** | |||||||
| hg19:Y:27423507-C-A hg38:Y:25277360-C-A | P1_g3 | ** | ||||||
| hg38:Y:10948888-G-T | ** | |||||||
| hg19:Y:5449316-C-A hg38:Y:5581275-C-A | ** | |||||||
| hg38:Y:10796498-C-A | ** | |||||||
| hg19:Y:14784927-C-A hg38:Y:12672997-C-A | ** | |||||||
| hg19:Y:16705551-C-A hg38:Y:14593671-C-A | ** | |||||||
| hg19:Y:14888107-A-C hg38:Y:12776173-A-C | ** | |||||||
| hg19:Y:15157857-T-A hg38:Y:13045944-T-A | ** | |||||||
| hg19:Y:13585474-C-A hg38:Y:11429798-C-A | ** | |||||||
| hg19:Y:4103131-C-A hg38:Y:4235090-C-A | ** | |||||||
| hg38:Y:10979957-C-A | ** | |||||||
| hg38:Y:10804071-G-T | ** | |||||||
| hg38:Y:9120132-C-A | ** | |||||||
| hg19:Y:21412320-C-T hg38:Y:19250434-C-T | ** | |||||||
| hg19:Y:3591815-C-A hg38:Y:3723774-C-A | ** | |||||||
| hg19:Y:7320376-C-A hg38:Y:7452335-C-A | ** | |||||||
| hg19:Y:20761014-A-T hg38:Y:18599128-A-T | BY212343 | P4_Prx | ** | |||||
| hg19:Y:17448616-C-CA hg38:Y:15336736-C-CA | 9×A | ** | ||||||
| hg19:Y:22052657-C-A hg38:Y:19890771-C-A | ** | |||||||
| hg19:Y:2812808-G-T hg38:Y:2944767-G-T | ** | |||||||
| hg19:Y:4213433-C-A hg38:Y:4345392-C-A | ** | |||||||
| hg19:Y:7012452-C-A hg38:Y:7144411-C-A | ** | |||||||
| hg19:Y:4527404-C-A hg38:Y:4659363-C-A | ** | |||||||
| hg38:Y:10756986-A-C | ** | |||||||
| hg19:Y:9932812-C-A hg38:Y:10095203-C-A | ** | |||||||
| hg38:Y:10692125-C-A | ** | |||||||
| hg19:Y:28660694-C-A hg38:Y:26514547-C-A | ** | |||||||
| hg19:Y:13885448-C-A hg38:Y:11764742-C-A | ** | |||||||
| hg19:Y:9013127-G-A hg38:Y:9175518-G-A | ** | |||||||
| hg19:Y:6247077-C-A hg38:Y:6379036-C-A | IR3_Dst | ** | ||||||
| hg38:Y:10796195-T-C | ** | |||||||
| hg19:Y:4016536-A-G hg38:Y:4148495-A-G | ** | |||||||
| hg38:Y:56681981-G-C | ** | |||||||
| hg19:Y:7254831-C-A hg38:Y:7386790-C-A | ** | |||||||
| hg38:Y:11013071-C-A | ** | |||||||
| hg38:Y:10893881-C-A | ** | |||||||
| hg19:Y:21202296-T-G hg38:Y:19040410-T-G | ** | |||||||
| hg19:Y:22077077-T-G hg38:Y:19915191-T-G | ** | |||||||
| hg19:Y:23311251-T-C hg38:Y:21149365-T-C | ** | |||||||
| hg19:Y:7436230-C-A hg38:Y:7568189-C-A | ** | |||||||
| hg19:Y:13996508-C-A hg38:Y:11875802-C-A | ** | |||||||
| hg19:Y:18928570-CAAAAA-C hg38:Y:16816690-CAAAAA-C | 28×A | ** | ||||||
| hg19:Y:23848655-G-T hg38:Y:21686769-G-T | ** | |||||||
| hg19:Y:4919963-T-C hg38:Y:5051922-T-C | ** | |||||||
| hg19:Y:5249124-C-A hg38:Y:5381083-C-A | ** | |||||||
| hg19:Y:8556157-C-A hg38:Y:8688116-C-A | ** | |||||||
| hg19:Y:4969334-C-A hg38:Y:5101293-C-A | ** | |||||||
| hg19:Y:16445853-C-A hg38:Y:14333973-C-A | ** | |||||||
| hg19:Y:28613319-C-A hg38:Y:26467172-C-A | ** | |||||||
| hg38:Y2:17029-C-A | ** | |||||||
| hg19:Y:4129800-C-A hg38:Y:4261759-C-A | ** | |||||||
| hg19:Y:15699833-C-A hg38:Y:13587953-C-A | ** | |||||||
| hg38:Y:10994640-G-AATCCA | ** | |||||||
| hg19:Y:13224627-C-A hg38:Y:11068951-C-A | ** | |||||||
| hg19:Y:9013210-A-G hg38:Y:9175601-A-G | ** | |||||||
| hg19:Y:13894354-C-A hg38:Y:11773648-C-A | ** | |||||||
| hg19:Y:4920293-G-T hg38:Y:5052252-G-T | ** | |||||||
| hg19:Y:17952623-C-CTTT hg38:Y:15840743-C-CTTT | 16×T | ** | ||||||
| hg19:Y:14392780-A-T hg38:Y:12272076-A-T | ** | |||||||
| hg19:Y:23475343-C-A hg38:Y:21313457-C-A | ** | |||||||
| hg19:Y:23345868-C-A hg38:Y:21183982-C-A | ** | |||||||
| hg19:Y:17517181-C-A hg38:Y:15405301-C-A | ** | |||||||
| hg19:Y:22613983-C-A hg38:Y:20452097-C-A | ** | |||||||
| hg19:Y:4270732-C-A hg38:Y:4402691-C-A | ** | |||||||
| hg19:Y:3625906-C-A hg38:Y:3757865-C-A | ** | |||||||
| hg19:Y:18997240-C-A hg38:Y:16885360-C-A | 11×A | ** | ||||||
| hg19:Y:28687199-C-CT hg38:Y:26541052-C-CT | 8×T | ** | ||||||
| hg19:Y:2679151-G-T hg38:Y:2811110-G-T | ** | |||||||
| hg19:Y:2682864-G-T hg38:Y:2814823-G-T | ** | |||||||
| hg19:Y:2774080-T-G hg38:Y:2906039-T-G | ** | |||||||
| hg19:Y:2825283-C-T hg38:Y:2957242-C-T | Y60342 | ** | ||||||
| hg19:Y:2866844-C-A hg38:Y:2998803-C-A | ** | |||||||
| hg19:Y:3199447-CT-C hg38:Y:3331406-CT-C | ** | |||||||
| hg19:Y:3234736-G-T hg38:Y:3366695-G-T | ** | |||||||
| hg19:Y:3490279-G-T hg38:Y:3622238-G-T | ** | |||||||
| hg19:Y:3491970-C-A hg38:Y:3623929-C-A | ** | |||||||
| hg19:Y:3680094-T-C hg38:Y:3812053-T-C | ** | |||||||
| hg19:Y:3700502-G-A hg38:Y:3832461-G-A | ** | |||||||
| hg19:Y:3725369-C-A hg38:Y:3857328-C-A | ** | |||||||
| hg19:Y:3725707-A-C hg38:Y:3857666-A-C | ** | |||||||
| hg19:Y:3806962-C-A hg38:Y:3938921-C-A | ** | |||||||
| hg19:Y:3940549-A-G hg38:Y:4072508-A-G | ** | |||||||
| hg19:Y:4009187-G-T hg38:Y:4141146-G-T | ** | |||||||
| hg19:Y:4078472-A-G hg38:Y:4210431-A-G | ** | |||||||
| hg19:Y:4108221-G-C hg38:Y:4240180-G-C | ** | |||||||
| hg19:Y:4225179-A-G hg38:Y:4357138-A-G | ** | |||||||
| hg19:Y:4302500-A-G hg38:Y:4434459-A-G | ** | |||||||
| hg19:Y:4370671-C-A hg38:Y:4502630-C-A | ** | |||||||
| hg19:Y:4388001-G-T hg38:Y:4519960-G-T | ** | |||||||
| hg19:Y:4499698-A-G hg38:Y:4631657-A-G | ** | |||||||
| hg19:Y:4533442-G-T hg38:Y:4665401-G-T | ** | |||||||
| hg19:Y:4689441-T-A hg38:Y:4821400-T-A | ** | |||||||
| hg19:Y:4814173-G-T hg38:Y:4946132-G-T | ** | |||||||
| hg19:Y:4814304-G-T hg38:Y:4946263-G-T | ** | |||||||
| hg19:Y:4951475-G-A hg38:Y:5083434-G-A | FT120833 | ** | ||||||
| hg19:Y:5118512-G-T hg38:Y:5250471-G-T | ** | |||||||
| hg19:Y:5211901-T-C hg38:Y:5343860-T-C | ** | |||||||
| hg19:Y:5211933-T-C hg38:Y:5343892-T-C | ** | |||||||
| hg19:Y:5212041-C-A hg38:Y:5344000-C-A | ** | |||||||
| hg19:Y:5216708-C-A hg38:Y:5348667-C-A | ** | |||||||
| hg19:Y:5220938-C-A hg38:Y:5352897-C-A | ** | |||||||
| hg19:Y:5227066-C-A hg38:Y:5359025-C-A | ** | |||||||
| hg19:Y:5277692-CT-C hg38:Y:5409651-CT-C | ** | |||||||
| hg19:Y:5547480-C-A hg38:Y:5679439-C-A | ** | |||||||
| hg19:Y:5552700-G-T hg38:Y:5684659-G-T | ** | |||||||
| hg19:Y:5559906-A-T hg38:Y:5691865-A-T | ** | |||||||
| hg19:Y:5560748-C-A hg38:Y:5692707-C-A | ** | |||||||
| hg19:Y:5591607-C-A hg38:Y:5723566-C-A | ** | |||||||
| hg19:Y:5799001-C-A hg38:Y:5930960-C-A | ** | |||||||
| hg19:Y:5799337-C-T hg38:Y:5931296-C-T | ** | |||||||
| hg19:Y:5845940-A-G hg38:Y:5977899-A-G | ** | |||||||
| hg19:Y:5864826-A-T hg38:Y:5996785-A-T | ** | |||||||
| hg19:Y:5966361-G-T hg38:Y:6098320-G-T | ** | |||||||
| hg19:Y:6090456-A-G hg38:Y:6222415-A-G | ** | |||||||
| hg19:Y:6347540-GGT-G hg38:Y:6479499-GGT-G | ** | |||||||
| hg19:Y:6474767-C-T hg38:Y:6606726-C-T | ** | |||||||
| hg19:Y:6485867-G-A hg38:Y:6617826-G-A | ** | |||||||
| hg19:Y:6757872-C-A hg38:Y:6889831-C-A | ** | |||||||
| hg19:Y:6981204-A-G hg38:Y:7113163-A-G | ** | |||||||
| hg19:Y:7020616-C-T hg38:Y:7152575-C-T | ** | |||||||
| hg19:Y:7033445-C-A hg38:Y:7165404-C-A | ** | |||||||
| hg19:Y:7040330-C-A hg38:Y:7172289-C-A | ** | |||||||
| hg19:Y:7048472-T-A hg38:Y:7180431-T-A | ** | |||||||
| hg19:Y:7080644-T-C hg38:Y:7212603-T-C | ** | |||||||
| hg19:Y:7102160-A-G hg38:Y:7234119-A-G | ** | |||||||
| hg19:Y:7102241-C-A hg38:Y:7234200-C-A | ** | |||||||
| hg19:Y:7110509-A-T hg38:Y:7242468-A-T | ** | |||||||
| hg19:Y:7166504-A-C hg38:Y:7298463-A-C | ** | |||||||
| hg19:Y:7254139-C-A hg38:Y:7386098-C-A | ** | |||||||
| hg19:Y:7277697-C-A hg38:Y:7409656-C-A | ** | |||||||
| hg19:Y:7296026-C-T hg38:Y:7427985-C-T | ** | |||||||
| hg19:Y:7311907-T-C hg38:Y:7443866-T-C | ** | |||||||
| hg19:Y:7534430-A-T hg38:Y:7666389-A-T | ** | |||||||
| hg19:Y:7721516-C-A hg38:Y:7853475-C-A | ** | |||||||
| hg19:Y:7757203-C-A hg38:Y:7889162-C-A | ** | |||||||
| hg19:Y:8079466-A-G hg38:Y:8211425-A-G | ** | |||||||
| hg19:Y:8125009-G-GAAAA hg38:Y:8256968-G-GAAAA | 11×AAGA | ** | ||||||
| hg19:Y:8181219-G-A hg38:Y:8313178-G-A | ** | |||||||
| hg19:Y:8181227-G-A hg38:Y:8313186-G-A | ** | |||||||
| hg19:Y:8181235-GC-G hg38:Y:8313194-GC-G | ** | |||||||
| hg19:Y:8181258-G-T hg38:Y:8313217-G-T | ** | |||||||
| hg19:Y:8181288-C-T hg38:Y:8313247-C-T | ** | |||||||
| hg19:Y:8379664-A-T hg38:Y:8511623-A-T | ** | |||||||
| hg19:Y:8731729-G-A hg38:Y:8863688-G-A | ** | |||||||
| hg19:Y:8851892-C-A hg38:Y:8983851-C-A | ** | |||||||
| hg38:Y:9108562-A-T | ** | |||||||
| hg19:Y:9013132-C-T hg38:Y:9175523-C-T | ** | |||||||
| hg19:Y:9013138-G-A hg38:Y:9175529-G-A | ** | |||||||
| hg19:Y:9013165-G-A hg38:Y:9175556-G-A | ** | |||||||
| hg19:Y:9013166-G-A hg38:Y:9175557-G-A | ** | |||||||
| hg19:Y:9013172-G-C hg38:Y:9175563-G-C | ** | |||||||
| hg19:Y:9013173-G-A hg38:Y:9175564-G-A | ** | |||||||
| hg19:Y:9013175-G-T hg38:Y:9175566-G-T | ** | |||||||
| hg19:Y:9013189-C-T hg38:Y:9175580-C-T | ** | |||||||
| hg19:Y:9013194-C-G hg38:Y:9175585-C-G | ** | |||||||
| hg19:Y:9013202-G-C hg38:Y:9175593-G-C | ** | |||||||
| hg19:Y:9077260-G-T hg38:Y:9239651-G-T | ** | |||||||
| hg19:Y:9116938-G-T hg38:Y:9279329-G-T | ** | |||||||
| hg19:Y:9408741-A-G hg38:Y:9571132-A-G | ** | |||||||
| hg19:Y:9908551-C-A hg38:Y:10070942-C-A | ** | |||||||
| hg38:Y:10654053-G-T | ** | |||||||
| hg38:Y:10673737-C-G | ** | |||||||
| hg38:Y:10676729-A-T | ** | |||||||
| hg38:Y:10686310-TCG-T | ** | |||||||
| hg38:Y:10686315-T-A | ** | |||||||
| hg38:Y:10686316-CCATTCCGT-C | ** | |||||||
| hg38:Y:10692694-A-G | ** | |||||||
| hg38:Y:10768930-C-A | ** | |||||||
| hg38:Y:10787529-C-A | ** | |||||||
| hg38:Y:10800942-A-T | ** | |||||||
| hg38:Y:10800965-C-A | ** | |||||||
| hg38:Y:10831846-C-G | ** | |||||||
| hg38:Y:10831942-A-G | ** | |||||||
| hg38:Y:10855812-CT-C | ** | |||||||
| hg38:Y:10860277-A-C | ** | |||||||
| hg38:Y:10867902-C-A | ** | |||||||
| hg38:Y:10872740-C-A | ** | |||||||
| hg38:Y:10893140-C-A | ** | |||||||
| hg38:Y:10902479-C-G | ** | |||||||
| hg38:Y:10911570-A-G | ** | |||||||
| hg38:Y:10912174-T-C | ** | |||||||
| hg38:Y:10914401-T-C | ** | |||||||
| hg38:Y:10921296-C-T | ** | |||||||
| hg38:Y:10940522-A-G | ** | |||||||
| hg38:Y:10949015-T-C | ** | |||||||
| hg38:Y:10951621-C-A | ** | |||||||
| hg38:Y:10955688-C-A | ** | |||||||
| hg38:Y:10964550-T-C | ** | |||||||
| hg38:Y:10964572-C-G | ** | |||||||
| hg38:Y:10965339-C-CATTCT | ** | |||||||
| hg38:Y:10972414-C-G | ** | |||||||
| hg38:Y:10984065-G-T | ** | |||||||
| hg38:Y:10984094-T-C | ** | |||||||
| hg38:Y:10998736-C-A | ** | |||||||
| hg38:Y:11003522-A-C | ** | |||||||
| hg38:Y:11031253-T-A | ** | |||||||
| hg19:Y:13253179-C-G hg38:Y:11097503-C-G | ** | |||||||
| hg19:Y:13310882-C-A hg38:Y:11155206-C-A | ** | |||||||
| hg19:Y:13316106-C-A hg38:Y:11160430-C-A | ** | |||||||
| hg19:Y:13472189-C-G hg38:Y:11316513-C-G | ** | |||||||
| hg19:Y:13484637-C-A hg38:Y:11328961-C-A | ** | |||||||
| hg19:Y:13509110-C-A hg38:Y:11353434-C-A | ** | |||||||
| hg19:Y:13512178-C-A hg38:Y:11356502-C-A | ** | |||||||
| hg19:Y:13554649-T-A hg38:Y:11398973-T-A | ** | |||||||
| hg19:Y:13603168-C-A hg38:Y:11447492-C-A | ** | |||||||
| hg19:Y:13643884-CCTTTT-C hg38:Y:11488208-CCTTTT-C | ** | |||||||
| hg38:Y:11644677-G-C | DYZ17 | ** | ||||||
| hg38:Y:11674724-G-T | DYZ17 | ** | ||||||
| hg19:Y:13884791-C-A hg38:Y:11764085-C-A | ** | |||||||
| hg19:Y:13908375-G-T hg38:Y:11787669-G-T | ** | |||||||
| hg19:Y:13909165-T-C hg38:Y:11788459-T-C | ** | |||||||
| hg19:Y:13974721-C-A hg38:Y:11854015-C-A | ** | |||||||
| hg19:Y:13987196-C-G hg38:Y:11866490-C-G | ** | |||||||
| hg19:Y:14009403-C-A hg38:Y:11888697-C-A | ** | |||||||
| hg19:Y:14025742-A-G hg38:Y:11905036-A-G | ** | |||||||
| hg19:Y:14176567-A-T hg38:Y:12055861-A-T | ** | |||||||
| hg19:Y:14216498-T-C hg38:Y:12095792-T-C | ** | |||||||
| hg19:Y:14224124-G-A hg38:Y:12103418-G-A | ** | |||||||
| hg19:Y:14307563-G-T hg38:Y:12186857-G-T | ** | |||||||
| hg19:Y:14324931-T-G hg38:Y:12204225-T-G | ** | |||||||
| hg19:Y:14389965-C-G hg38:Y:12269261-C-G | ** | |||||||
| hg19:Y:14560688-T-C hg38:Y:12448889-T-C | ** | |||||||
| hg19:Y:14715067-C-T hg38:Y:12603134-C-T | ** | |||||||
| hg19:Y:14721536-C-A hg38:Y:12609604-C-A | ** | |||||||
| hg19:Y:14742177-T-C hg38:Y:12630245-T-C | ** | |||||||
| hg19:Y:14742202-A-C hg38:Y:12630270-A-C | ** | |||||||
| hg19:Y:14754095-G-A hg38:Y:12642164-G-A | ** | |||||||
| hg19:Y:14785013-C-A hg38:Y:12673083-C-A | ** | |||||||
| hg19:Y:14986451-AAAG-A hg38:Y:12874519-AAAG-A | ** | |||||||
| hg19:Y:15178338-G-A hg38:Y:13066424-G-A | ** | |||||||
| hg19:Y:15235453-C-T hg38:Y:13123539-C-T | ** | |||||||
| hg19:Y:15433568-A-G hg38:Y:13321688-A-G | FT153960 | ** | ||||||
| hg19:Y:15684408-A-T hg38:Y:13572528-A-T | ** | |||||||
| hg19:Y:15684573-C-T hg38:Y:13572693-C-T | ** | |||||||
| hg19:Y:15776999-A-T hg38:Y:13665119-A-T | ** | |||||||
| hg19:Y:15777079-A-G hg38:Y:13665199-A-G | ** | |||||||
| hg19:Y:15921413-T-C hg38:Y:13809533-T-C | ** | |||||||
| hg19:Y:16002422-G-A hg38:Y:13890542-G-A | ** | |||||||
| hg19:Y:16019014-C-A hg38:Y:13907134-C-A | ** | |||||||
| hg19:Y:16037406-C-A hg38:Y:13925526-C-A | ** | |||||||
| hg19:Y:16050291-C-A hg38:Y:13938411-C-A | ** | |||||||
| hg19:Y:16059693-T-C hg38:Y:13947813-T-C | ** | |||||||
| hg19:Y:16191644-G-T hg38:Y:14079764-G-T | ** | |||||||
| hg19:Y:16241558-A-C hg38:Y:14129678-A-C | ** | |||||||
| hg19:Y:16241633-T-G hg38:Y:14129753-T-G | ** | |||||||
| hg19:Y:16305921-TCTCAA-T hg38:Y:14194041-TCTCAA-T | ** | |||||||
| hg19:Y:16424532-G-T hg38:Y:14312652-G-T | ** | |||||||
| hg19:Y:16445570-C-A hg38:Y:14333690-C-A | ** | |||||||
| hg19:Y:16462623-T-C hg38:Y:14350743-T-C | ** | |||||||
| hg19:Y:16474822-G-T hg38:Y:14362942-G-T | ** | |||||||
| hg19:Y:16520966-C-A hg38:Y:14409086-C-A | ** | |||||||
| hg19:Y:16619891-G-T hg38:Y:14508011-G-T | ** | |||||||
| hg19:Y:16665434-C-A hg38:Y:14553554-C-A | ** | |||||||
| hg19:Y:16673517-A-T hg38:Y:14561637-A-T | ** | |||||||
| hg19:Y:16676618-C-A hg38:Y:14564738-C-A | ** | |||||||
| hg19:Y:16677257-C-T hg38:Y:14565377-C-T | ** | |||||||
| hg19:Y:16720385-G-T hg38:Y:14608505-G-T | ** | |||||||
| hg19:Y:16842957-C-A hg38:Y:14731077-C-A | ** | |||||||
| hg19:Y:17046689-T-A hg38:Y:14934809-T-A | ** | |||||||
| hg19:Y:17081242-TATATAA-T hg38:Y:14969362-TATATAA-T | ** | |||||||
| hg19:Y:17222219-C-A hg38:Y:15110339-C-A | ** | |||||||
| hg19:Y:17317527-C-A hg38:Y:15205647-C-A | ** | |||||||
| hg19:Y:17363189-G-A hg38:Y:15251309-G-A | ** | |||||||
| hg19:Y:17363194-G-A hg38:Y:15251314-G-A | ** | |||||||
| hg19:Y:17385263-T-C hg38:Y:15273383-T-C | ** | |||||||
| hg19:Y:17389871-A-T hg38:Y:15277991-A-T | ** | |||||||
| hg19:Y:17425133-T-C hg38:Y:15313253-T-C | ** | |||||||
| hg19:Y:17581826-A-T hg38:Y:15469946-A-T | FT398701 | ** | ||||||
| hg19:Y:17589041-T-A hg38:Y:15477161-T-A | ** | |||||||
| hg19:Y:17624497-G-T hg38:Y:15512617-G-T | ** | |||||||
| hg19:Y:17634670-T-A hg38:Y:15522790-T-A | ** | |||||||
| hg19:Y:17641481-G-T hg38:Y:15529601-G-T | ** | |||||||
| hg19:Y:17717060-A-T hg38:Y:15605180-A-T | ** | |||||||
| hg19:Y:17722882-G-A hg38:Y:15611002-G-A | ** | |||||||
| hg19:Y:17859148-G-A hg38:Y:15747268-G-A | ** | |||||||
| hg19:Y:18188119-G-T hg38:Y:16076239-G-T | ** | |||||||
| hg19:Y:18231204-C-A hg38:Y:16119324-C-A | ** | |||||||
| hg19:Y:18284541-C-G hg38:Y:16172661-C-G | FT257309 | P6_Prx | ** | |||||
| hg19:Y:18410691-A-G hg38:Y:16298811-A-G | P6_Gap | ** | ||||||
| hg19:Y:18427744-C-A hg38:Y:16315864-C-A | P6_Dst | ** | ||||||
| hg19:Y:18703863-C-A hg38:Y:16591983-C-A | ** | |||||||
| hg19:Y:18930661-C-A hg38:Y:16818781-C-A | ** | |||||||
| hg19:Y:19200973-G-T hg38:Y:17089093-G-T | ** | |||||||
| hg19:Y:19235436-A-G hg38:Y:17123556-A-G | FT385611 | ** | ||||||
| hg19:Y:19312475-A-G hg38:Y:17200595-A-G | ** | |||||||
| hg19:Y:19379635-A-G hg38:Y:17267755-A-G | ** | |||||||
| hg19:Y:19425020-C-A hg38:Y:17313140-C-A | ** | |||||||
| hg19:Y:19489244-T-A hg38:Y:17377364-T-A | ** | |||||||
| hg19:Y:19625153-A-T hg38:Y:17513273-A-T | P5_Prx | ** | ||||||
| hg19:Y:19873758-C-A hg38:Y:17761878-C-A | P5_Prx | ** | ||||||
| hg19:Y:20920836-C-A hg38:Y:18758950-C-A | P4_Dst | ** | ||||||
| hg19:Y:21127361-T-C hg38:Y:18965475-T-C | ** | |||||||
| hg19:Y:21127490-CA-C hg38:Y:18965604-CA-C | ** | |||||||
| hg19:Y:21153223-G-A hg38:Y:18991337-G-A | ** | |||||||
| hg19:Y:21167455-T-G hg38:Y:19005569-T-G | ** | |||||||
| hg19:Y:21207738-C-A hg38:Y:19045852-C-A | ** | |||||||
| hg19:Y:21225205-C-T hg38:Y:19063319-C-T | ** | |||||||
| hg19:Y:21323573-C-A hg38:Y:19161687-C-A | ** | |||||||
| hg19:Y:21512221-C-A hg38:Y:19350335-C-A | ** | |||||||
| hg19:Y:21796452-C-A hg38:Y:19634566-C-A | ** | |||||||
| hg19:Y:21863914-G-T hg38:Y:19702028-G-T | ** | |||||||
| hg19:Y:21863922-A-G hg38:Y:19702036-A-G | ** | |||||||
| hg19:Y:22013119-A-C hg38:Y:19851233-A-C | ** | |||||||
| hg19:Y:22077177-T-A hg38:Y:19915291-T-A | ** | |||||||
| hg19:Y:22236922-G-T hg38:Y:20075036-G-T | DYZ19 | ** | ||||||
| hg19:Y:22427763-C-A hg38:Y:20265877-C-A | DYZ19 | ** | ||||||
| hg19:Y:22602348-A-G hg38:Y:20440462-A-G | ** | |||||||
| hg19:Y:22690063-C-A hg38:Y:20528177-C-A | ** | |||||||
| hg19:Y:22765799-C-A hg38:Y:20603913-C-A | ** | |||||||
| hg19:Y:22798024-A-T hg38:Y:20636138-A-T | ** | |||||||
| hg19:Y:22804115-C-A hg38:Y:20642229-C-A | ** | |||||||
| hg19:Y:22836606-G-C hg38:Y:20674720-G-C | ** | |||||||
| hg19:Y:23137538-C-A hg38:Y:20975652-C-A | ** | |||||||
| hg19:Y:23207068-C-A hg38:Y:21045182-C-A | Y79473 | ** | ||||||
| hg19:Y:23373178-G-T hg38:Y:21211292-G-T | ** | |||||||
| hg19:Y:23412112-C-A hg38:Y:21250226-C-A | ** | |||||||
| hg19:Y:23412114-C-T hg38:Y:21250228-C-T | ** | |||||||
| hg19:Y:23412118-T-C hg38:Y:21250232-T-C | ** | |||||||
| hg19:Y:23412126-A-G hg38:Y:21250240-A-G | ** | |||||||
| hg19:Y:23412127-T-C hg38:Y:21250241-T-C | ** | |||||||
| hg19:Y:23412134-G-A hg38:Y:21250248-G-A | ** | |||||||
| hg19:Y:23516720-G-T hg38:Y:21354834-G-T | ** | |||||||
| hg19:Y:23952362-C-A hg38:Y:21806215-C-A | ** | |||||||
| hg19:Y:23952379-A-G hg38:Y:21806232-A-G | ** | |||||||
| hg19:Y:24246685-A-T hg38:Y:22100538-A-T | P3_b1 | ** | ||||||
| hg19:Y:24406890-C-A hg38:Y:22260743-C-A | ** | |||||||
| hg19:Y:24407721-C-A hg38:Y:22261574-C-A | ** | |||||||
| hg19:Y:25963868-T-C hg38:Y:23817721-T-C | P1_Y1 | ** | ||||||
| hg19:Y:25995091-A-G hg38:Y:23848944-A-G | P1_Y1 | ** | ||||||
| hg19:Y:27815599-G-T hg38:Y:25669452-G-T | P1_Y2 | ** | ||||||
| hg19:Y:27862441-A-G hg38:Y:25716294-A-G | P1_Y2 | ** | ||||||
| hg19:Y:28467902-C-A hg38:Y:26321755-C-A | ** | |||||||
| hg19:Y:28491836-TA-T hg38:Y:26345689-TA-T | ** | |||||||
| hg19:Y:28497960-C-A hg38:Y:26351813-C-A | ** | |||||||
| hg19:Y:28514761-A-T hg38:Y:26368614-A-T | ** | |||||||
| hg19:Y:28545990-C-G hg38:Y:26399843-C-G | ** | |||||||
| hg19:Y:28589382-T-C hg38:Y:26443235-T-C | ** | |||||||
| hg19:Y:28591116-G-A hg38:Y:26444969-G-A | ** | |||||||
| hg19:Y:28591871-T-C hg38:Y:26445724-T-C | ** | |||||||
| hg19:Y:28656733-C-A hg38:Y:26510586-C-A | ** | |||||||
| hg19:Y:28673673-C-A hg38:Y:26527526-C-A | ** | |||||||
| hg19:Y:28700380-T-C hg38:Y:26554233-T-C | ** | |||||||
| hg19:Y:28722819-G-T hg38:Y:26576672-G-T | ** | |||||||
| hg19:Y:28729394-C-A hg38:Y:26583247-C-A | ** | |||||||
| hg19:Y:28754398-C-A hg38:Y:26608251-C-A | ** | |||||||
| hg19:Y:28762380-C-A hg38:Y:26616233-C-A | ** | |||||||
| hg19:Y:28764907-C-A hg38:Y:26618760-C-A | ** | |||||||
| hg19:Y:28776133-T-G hg38:Y:26629986-T-G | ** | |||||||
| hg19:Y:28782181-T-C hg38:Y:26636034-T-C | ** | |||||||
| hg38:Y:56846134-A-G | ** | |||||||
| hg38:Y:56886893-G-T | ** | |||||||
| hg38:Y2:16765-T-C | ** | |||||||
| hg19:Y:24107374-GA-G hg38:Y:21961227-GA-G | P3_b1 | 12×A | *** | |||||
| hg19:Y:8452220-C-A hg38:Y:8584179-C-A | *** | |||||||
| hg19:Y:17527438-G-GTATA hg38:Y:15415558-G-GTATA | 18×TA | *** | ||||||
| hg19:Y:8398840-CAAAAAA-C hg38:Y:8530799-CAAAAAA-C | 17×A | *** | ||||||
| hg19:Y:13202232-TA-T hg38:Y:11046556-TA-T | 9×A | *** | *** | |||||
| hg19:Y:22243380-T-C hg38:Y:20081494-T-C | DYZ19 | *** | ||||||
| hg19:Y:22243513-A-G hg38:Y:20081627-A-G | DYZ19 | *** | ||||||
| hg19:Y:22317120-C-T hg38:Y:20155234-C-T | DYZ19 | *** | ||||||
| hg19:Y:22345415-A-T hg38:Y:20183529-A-T | DYZ19 | *** | ||||||
| hg19:Y:25275697-G-A hg38:Y:23129550-G-A | P2_r1 | *** | ||||||
| hg19:Y:26203050-A-G hg38:Y:24056903-A-G | P1_Y1 | *** | ||||||
| hg19:Y:58975243-TTTTATTCCATTTCAC-T,TTTGATTCCATTTCAC hg38:Y:56829096-TTTTATTCCATTTCAC-T,TTTGATTCCATTTCAC | *** | |||||||
| hg19:Y:6980107-T-A hg38:Y:7112066-T-A | *** | |||||||
| hg38:Y:10887493-A-T | *** | |||||||
| hg19:Y:14502084-TAA-T hg38:Y:12390289-TAA-T | 10×A | *** | ||||||
| hg19:Y:16423917-C-A hg38:Y:14312037-C-A | *** | |||||||
| hg19:Y:15619621-G-A hg38:Y:13507741-G-A | *** | |||||||
| hg38:Y:10971227-CTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAT-C | *** | |||||||
| hg19:Y:13216787-C-A hg38:Y:11061111-C-A | *** | |||||||
| hg19:Y:2707419-TAAA-T hg38:Y:2839378-TAAA-T | 14×A | *** | ||||||
| hg19:Y:2888705-C-CAA,CAAA hg38:Y:3020664-C-CAA,CAAA | 16×A | *** | ||||||
| hg19:Y:6642298-C-T hg38:Y:6774257-C-T | *** | |||||||
| hg19:Y:8221228-CTTTT-C,CTT hg38:Y:8353187-CTTTT-C,CTT | 16×T | *** | ||||||
| hg19:Y:8398843-A-G hg38:Y:8530802-A-G | *** | |||||||
| hg19:Y:8466252-T-G hg38:Y:8598211-T-G | BZ2115 | *** | ||||||
| hg19:Y:9424598-GAAAAAAAA-G hg38:Y:9586989-GAAAAAAAA-G | 16×A | *** | ||||||
| hg19:Y:9908320-G-T hg38:Y:10070711-G-T | *** | |||||||
| hg38:Y:10658691-C-T | *** | |||||||
| hg38:Y:10839014-C-A | *** | |||||||
| hg38:Y:11015874-A-G | *** | |||||||
| hg38:Y:11021114-C-A | *** | |||||||
| hg19:Y:13409489-A-T hg38:Y:11253813-A-T | *** | |||||||
| hg19:Y:13585900-C-A hg38:Y:11430224-C-A | *** | |||||||
| hg19:Y:14938432-C-A hg38:Y:12826507-C-A | *** | |||||||
| hg19:Y:15305796-C-G hg38:Y:13193895-C-G | *** | |||||||
| hg19:Y:15396638-A-G hg38:Y:13284758-A-G | *** | |||||||
| hg19:Y:15480259-T-C hg38:Y:13368379-T-C | *** | |||||||
| hg19:Y:17749460-C-A hg38:Y:15637580-C-A | *** | |||||||
| hg19:Y:19330275-C-T hg38:Y:17218395-C-T | *** | |||||||
| hg19:Y:19337653-TTTG-G,T hg38:Y:17225773-TTTG-G,T | *** | |||||||
| hg19:Y:19403818-A-G hg38:Y:17291938-A-G | *** | |||||||
| hg19:Y:22209016-G-T hg38:Y:20047130-G-T | *** | |||||||
| hg19:Y:25954154-C-A hg38:Y:23808007-C-A | P1_Y1 | *** | ||||||
| hg38:Y:56835804-T-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 449752 | 10791990 | 7827965 | 7905283 |
| Kit: 449752 | 9789183 | 7968014 | 7856439 |
| Used in age calculations | 10791990 | 7968014 | 7905283 |
| Counts of SNPs | 7 | 7 |
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