Donahue
FTDNA: 358147, BigY2: 358147MDKA Birth: Ireland
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 358147 | BigY2 358147 |
---|---|---|---|---|---|---|---|---|---|
16817000-C-T | 14705120-C-T | 8980486-A-T | CTS6315 | Y | Y | + | + | ||
8110520-A-T | 8242479-A-T | ** | ** | ||||||
20989158-T-C | 18827272-T-C | P4_Dst | ** | ||||||
18838464-G-A | 16726584-G-A | M6437 | ** | ||||||
6699020-A-T | 6830979-A-T | 24×T | ** | ||||||
14667817-C-CAAA | 12555882-C-CAA | 23×A | ** | ||||||
4889301-C-A | 5021260-C-A | ** | |||||||
7243217-C-A | 7375176-C-A | ** | |||||||
5813686-C-T | 5945645-C-T | ** | |||||||
6096472-C-A | 6228431-C-A | ** | |||||||
22058321-CAA-C | 19896435-CAA-C | 11×A | ** | ||||||
18147509-C-CTT | 16035629-C-CTT | 28×T | ** | ||||||
10759942-C-G | ** | ||||||||
10759944-G-T | ** | ||||||||
10759947-T-TTTAAC | ** | ||||||||
4616624-C-A | 4748583-C-A | ** | |||||||
10673580-T-A | ** | ||||||||
10673601-C-CTAATA | ** | ||||||||
10673604-C-A | ** | ||||||||
10673609-T-A | ** | ||||||||
10673616-C-A | ** | ||||||||
10673618-A-T | ** | ||||||||
10673622-T-C | ** | ||||||||
10673623-T-TA | ** | ||||||||
14570755-CATT-C | 12458955-CATT-C | ** | |||||||
26344215-G-T | 24198068-G-T | P1_Y1 | ** | ||||||
7259056-C-A | 7391015-C-A | ** | |||||||
5274297-C-A | 5406256-C-A | ** | |||||||
15173540-T-C | 13061626-T-C | ** | |||||||
21138731-C-A | 18976845-C-A | ** | |||||||
10808598-T-C | ** | ||||||||
4472357-C-A | 4604316-C-A | ** | |||||||
10880292-C-CT | ** | ||||||||
10880295-AC-A | ** | ||||||||
10880327-CACTCCACT-C | ** | ||||||||
10880338-ACT-A | ** | ||||||||
10880348-A-T | ** | ||||||||
21780448-G-A | ** | ||||||||
22538058-C-A | 20376172-C-A | ** | |||||||
10686442-G-T | ** | ||||||||
11673674-C-A | ** | ||||||||
7221537-C-A | 7353496-C-A | ** | |||||||
10969258-C-T | ** | ||||||||
20496941-T-TCA | 18335055-T-TCA | P5_Dst | ** | ||||||
16271807-GAAAAAAA-G | 14159927-GAAAAAAA-G | 19×A | ** | ||||||
13846919-C-A | 11726213-C-A | ** | |||||||
7310593-A-T | 7442552-A-T | ** | |||||||
10872992-G-T | ** | ||||||||
21700595-GAAAA-G | 19538709-GAAAA-G | 17×A | ** | ||||||
15400167-C-CAAA | 13288287-C-CAAA | 14×A | ** | ||||||
14451430-C-A | 12330703-C-A | ** | |||||||
18630780-C-A | 16518900-C-A | ** | |||||||
7534663-AAT-A | 7666622-AAT-A | ** | |||||||
16275921-G-T | 14164041-G-T | ** | |||||||
10992324-C-A | ** | ||||||||
28741094-C-A | 26594947-C-A | ** | |||||||
23127013-C-A | 20965127-C-A | ** | |||||||
5863971-G-A | 5995930-G-A | FT152836 | ** | ||||||
19183847-G-T | 17071967-G-T | ** | |||||||
14711932-TC-T | 12599999-TC-T | 8×C | ** | ||||||
10992247-A-C | ** | ||||||||
22614267-C-A | 20452381-C-A | ** | |||||||
23512292-A-ATT | 21350406-A-ATT | 11×T | ** | ||||||
14355346-C-A | 12234641-C-A | ** | |||||||
3830891-C-A | 3962850-C-A | ** | |||||||
9117184-C-A | 9279575-C-A | ** | |||||||
10821954-T-A | ** | ||||||||
26098001-TAAAA-T | 23951854-TAAAA-T | P1_Y1 | 22×A | ** | |||||
17244533-G-T | 15132653-G-T | ** | |||||||
10999589-C-T | ** | ||||||||
18879941-C-A | 16768061-C-A | ** | |||||||
22001872-C-A | 19839986-C-A | ** | |||||||
10924369-C-G | ** | ||||||||
15686850-C-A | 13574970-C-A | ** | |||||||
15687625-C-A | 13575745-C-A | ** | |||||||
8158993-C-A | 8290952-C-A | ** | |||||||
11031197-A-G | ** | ||||||||
11031200-C-G | ** | ||||||||
13614192-C-A | 11458516-C-A | ** | |||||||
13909323-T-A | 11788617-T-A | FTA10432 | ** | ||||||
19009263-C-A | 16897383-C-A | ** | |||||||
4951708-C-A | 5083667-C-A | ** | |||||||
18346540-C-T | 16234660-C-T | P6_Prx | ** | ||||||
10929223-G-T | ** | ||||||||
17548721-C-A | 15436841-C-A | ** | |||||||
10836475-A-G | ** | ||||||||
28520576-C-A | 26374429-C-A | ** | |||||||
10962972-G-C | ** | ||||||||
10808655-C-T | ** | ||||||||
19758720-T-G | 17646840-T-G | P5_Prx | ** | ||||||
4094043-C-A | 4226002-C-A | ** | |||||||
7188349-C-A | 7320308-C-A | ** | |||||||
10956594-C-CGGAAT | ** | ||||||||
10962940-T-C | ** | ||||||||
10864653-G-GCATTCCATTC | ** | ||||||||
22205049-G-T | 20043163-G-T | ** | |||||||
16640288-C-A | 14528408-C-A | ** | |||||||
7097490-G-T | 7229449-G-T | ** | |||||||
15364054-CGT-C | 13252174-CGT-C | ** | |||||||
10929177-T-C | ** | ||||||||
21392601-C-A | 19230715-C-A | ** | |||||||
4930510-C-A | 5062469-C-A | ** | |||||||
3389420-C-A | 3521379-C-A | ** | |||||||
17379809-C-A | 15267929-C-A | ** | |||||||
14960159-C-A | 12848234-C-A | ** | |||||||
7829631-C-A | 7961590-C-A | ** | |||||||
5562890-C-A | 5694849-C-A | ** | |||||||
56862637-G-T | ** | ||||||||
7104971-C-A | 7236930-C-A | ** | |||||||
19081392-A-G | 16969512-A-G | ** | |||||||
13472215-A-ACC | 11316539-A-ACC | ** | |||||||
22218833-T-C | 20056947-T-C | DYZ19 | ** | ||||||
10946064-C-T | ** | ||||||||
15202489-C-A | 13090575-C-A | ** | |||||||
10896378-C-A | ** | ||||||||
7054098-C-A | 7186057-C-A | ** | |||||||
2762681-C-T | 2894640-C-T | M12001 | ** | ||||||
18997291-C-A | 16885411-C-A | ** | |||||||
24389981-C-A | 22243834-C-A | ** | |||||||
10767853-C-A | ** | ||||||||
20815597-C-A | 18653711-C-A | P4_Gap | ** | ||||||
3922632-A-G | 4054591-A-G | ** | |||||||
13919309-C-A | 11798603-C-A | ** | |||||||
15866261-T-C | 13754381-T-C | ** | |||||||
15622592-C-A | 13510712-C-A | ** | |||||||
10949390-G-T | ** | ||||||||
5367780-G-T | 5499739-G-T | FT145354 | ** | ||||||
5956867-C-A | 6088826-C-A | ** | |||||||
16842826-C-A | 14730946-C-A | ** | |||||||
18766730-C-A | 16654850-C-A | ** | |||||||
10979562-C-A | ** | ||||||||
21138735-AAAAC-A | 18976849-AAAAC-A | ** | |||||||
18892365-C-A | 16780485-C-A | ** | |||||||
21677998-C-A | 19516112-C-A | ** | |||||||
10970914-C-A | ** | ||||||||
17567658-C-A | 15455778-C-A | ** | |||||||
3834031-C-A | 3965990-C-A | ** | |||||||
14296782-C-A | 12176076-C-A | ** | |||||||
28492516-C-A | 26346369-C-A | ** | |||||||
18792522-C-A | 16680642-C-A | ** | |||||||
10929226-C-G | ** | ||||||||
10796737-G-T | ** | ||||||||
17342856-C-A | 15230976-C-A | ** | |||||||
10986441-T-C | ** | ||||||||
15178310-C-A | 13066396-C-A | ** | |||||||
9116822-C-T | 9279213-C-T | FT146138 | ** | ||||||
10828657-C-A | ** | ||||||||
15909487-C-T | 13797607-C-T | ** | |||||||
15909492-T-C | 13797612-T-C | ** | |||||||
16017468-C-A | 13905588-C-A | ** | |||||||
6983809-C-A | 7115768-C-A | ** | |||||||
16409033-G-T | 14297153-G-T | ** | |||||||
17363086-C-A | 15251206-C-A | ** | |||||||
4889303-G-A | 5021262-G-A | FT36013 | ** | ||||||
13942364-C-A | 11821658-C-A | ** | |||||||
16652037-C-A | 14540157-C-A | ** | |||||||
5755988-G-T | 5887947-G-T | ** | |||||||
16424864-G-T | 14312984-G-T | ** | |||||||
11009764-C-A | ** | ||||||||
15321310-C-A | 13209428-C-A | ** | |||||||
11013972-C-A | ** | ||||||||
10816529-T-C | ** | ||||||||
13936330-C-A | 11815624-C-A | ** | |||||||
16342233-C-A | 14230353-C-A | ** | |||||||
8822500-G-T | 8954459-G-T | ** | |||||||
14597962-C-A | 12486162-C-A | ** | |||||||
17342848-T-C | 15230968-T-C | ** | |||||||
11672189-C-A | ** | ||||||||
2679229-C-A | 2811188-C-A | ** | |||||||
2895461-C-A | 3027420-C-A | ** | |||||||
3048317-A-G | 3180276-A-G | ** | |||||||
3104034-T-A | 3235993-T-A | ** | |||||||
3121331-C-T | 3253290-C-T | FTB44489 | ** | ||||||
3131820-G-T | 3263779-G-T | ** | |||||||
3191030-C-A | 3322989-C-A | ** | |||||||
3308067-G-T | 3440026-G-T | ** | |||||||
3390059-C-A | 3522018-C-A | ** | |||||||
3454838-T-C | 3586797-T-C | ** | |||||||
3738813-G-T | 3870772-G-T | ** | |||||||
3923580-T-G | 4055539-T-G | ** | |||||||
3931681-C-A | 4063640-C-A | ** | |||||||
4039817-C-A | 4171776-C-A | ** | |||||||
4063796-C-T | 4195755-C-T | ** | |||||||
4070925-T-C | 4202884-T-C | ** | |||||||
4087714-T-C | 4219673-T-C | ** | |||||||
4094237-TA-T | 4226196-TA-T | ** | |||||||
4128940-C-A | 4260899-C-A | ** | |||||||
4214204-G-T | 4346163-G-T | ** | |||||||
4240523-A-T | 4372482-A-T | ** | |||||||
4349591-A-G | 4481550-A-G | ** | |||||||
4393170-TTGAG-T | 4525129-TTGAG-T | 6×TGAG | ** | ||||||
4426106-C-A | 4558065-C-A | ** | |||||||
4439305-C-A | 4571264-C-A | ** | |||||||
4527214-C-A | 4659173-C-A | ** | |||||||
4527914-T-C | 4659873-T-C | ** | |||||||
4873903-C-A | 5005862-C-A | ** | |||||||
4889309-AATTG-A | 5021268-AATTG-A | ** | |||||||
4889334-C-T | 5021293-C-T | ** | |||||||
4889341-A-G | 5021300-A-G | ** | |||||||
4889342-G-A | 5021301-G-A | ** | |||||||
4889349-G-A | 5021308-G-A | ** | |||||||
4889351-T-C | 5021310-T-C | ** | |||||||
4889357-C-T | 5021316-C-T | ** | |||||||
5017864-G-GC | 5149823-G-GC | ** | |||||||
5021861-G-A | 5153820-G-A | ** | |||||||
5127080-T-C | 5259039-T-C | ** | |||||||
5187118-C-A | 5319077-C-A | ** | |||||||
5421394-C-A | 5553353-C-A | ** | |||||||
5471900-GAAA-G | 5603859-GAAA-G | ** | |||||||
5562823-A-G | 5694782-A-G | ** | |||||||
5615473-A-G | 5747432-A-G | ** | |||||||
5757766-G-T | 5889725-G-T | ** | |||||||
5987744-C-A | 6119703-C-A | ** | |||||||
5990352-G-T | 6122311-G-T | ** | |||||||
6101325-T-A | 6233284-T-A | ** | |||||||
6251972-C-A | 6383931-C-A | IR3_Dst | ** | ||||||
6663827-T-A | 6795786-T-A | ** | |||||||
6786896-T-C | 6918855-T-C | ** | |||||||
6828378-A-T | 6960337-A-T | ** | |||||||
6829766-G-T | 6961725-G-T | ** | |||||||
7100378-C-A | 7232337-C-A | ** | |||||||
7102281-T-G | 7234240-T-G | ** | |||||||
7165349-T-C | 7297308-T-C | ** | |||||||
7170736-A-T | 7302695-A-T | ** | |||||||
7208405-T-C | 7340364-T-C | ** | |||||||
7258909-C-A | 7390868-C-A | FTB57524 | ** | ||||||
7306426-C-G | 7438385-C-G | ** | |||||||
7319313-C-A | 7451272-C-A | ** | |||||||
7359692-A-G | 7491651-A-G | ** | |||||||
7422764-G-T | 7554723-G-T | ** | |||||||
7425085-A-G | 7557044-A-G | ** | |||||||
7535936-G-A | 7667895-G-A | ** | |||||||
7535949-AGGAGAATGGCG-A | 7667908-AGGAGAATGGCG-A | ** | |||||||
7535965-T-C | 7667924-T-C | Z32462 | ** | ||||||
7535986-T-G | 7667945-T-G | ** | |||||||
7629939-C-A | 7761898-C-A | ** | |||||||
7829191-A-G | 7961150-A-G | ** | |||||||
7984476-C-T | 8116435-C-T | ** | |||||||
7990383-C-A | 8122342-C-A | ** | |||||||
8070037-C-A | 8201996-C-A | ** | |||||||
8092066-A-G | 8224025-A-G | ** | |||||||
8173839-C-T | 8305798-C-T | ** | |||||||
8173845-C-T | 8305804-C-T | ** | |||||||
8173848-C-T | 8305807-C-T | ** | |||||||
8173851-C-T | 8305810-C-T | ** | |||||||
8173854-G-A | 8305813-G-A | ** | |||||||
8379105-T-A | 8511064-T-A | ** | |||||||
8697938-T-C | 8829897-T-C | ** | |||||||
8741553-A-G | 8873512-A-G | ** | |||||||
9030234-G-T | 9192625-G-T | ** | |||||||
9076219-A-G | 9238610-A-G | ** | |||||||
9089044-G-T | 9251435-G-T | ** | |||||||
9144123-G-T | 9306514-G-T | ** | |||||||
9499574-G-T | 9661965-G-T | ** | |||||||
9769054-C-A | 9931445-C-A | ** | |||||||
10039888-C-G | 10202279-C-G | ** | |||||||
10625635-A-T | ** | ||||||||
10631394-C-A | ** | ||||||||
10655599-C-A | ** | ||||||||
10663570-C-A | ** | ||||||||
10665262-G-T | ** | ||||||||
10669708-C-A | ** | ||||||||
10684634-A-T | ** | ||||||||
10692491-C-A | ** | ||||||||
10745144-C-A | ** | ||||||||
10750739-T-C | FT429586 | ** | |||||||
10757351-ACTCCACTC-A | ** | ||||||||
10766934-C-T | FT430297 | ** | |||||||
10772938-C-A | ** | ||||||||
10775493-C-A | ** | ||||||||
10779571-C-T | ** | ||||||||
10786477-ACTCCACTC-A | ** | ||||||||
10792065-T-C | FT431384 | ** | |||||||
10804961-C-A | ** | ||||||||
10808610-C-T | ** | ||||||||
10808632-A-C | ** | ||||||||
10811156-A-T | ** | ||||||||
10811496-G-A | ** | ||||||||
10815009-C-A | ** | ||||||||
10815887-C-A | ** | ||||||||
10824381-A-G | ** | ||||||||
10824536-C-A | ** | ||||||||
10846134-T-C | ** | ||||||||
10862696-C-A | ** | ||||||||
10866476-C-A | ** | ||||||||
10869740-C-T | ** | ||||||||
10890398-C-A | ** | ||||||||
10892028-C-G | ** | ||||||||
10929178-G-C | ** | ||||||||
10929189-C-CTTCACTGCAT | ** | ||||||||
10929213-A-T | ** | ||||||||
10942124-C-T | ** | ||||||||
10942170-T-C | ** | ||||||||
10947299-A-C | ** | ||||||||
10949461-T-C | ** | ||||||||
10960915-C-A | ** | ||||||||
10962937-C-A | ** | ||||||||
10962938-C-G | ** | ||||||||
10962964-C-A | ** | ||||||||
10962969-A-T | ** | ||||||||
10964068-A-G | ** | ||||||||
10970954-T-C | ** | ||||||||
10971434-T-A | ** | ||||||||
10984450-T-G | ** | ||||||||
10988818-T-C | ** | ||||||||
10992079-C-A | ** | ||||||||
11013758-C-A | ** | ||||||||
11029458-TCAA-T | ** | ||||||||
11029468-A-C | ** | ||||||||
11029481-T-C | ** | ||||||||
11029485-G-A | ** | ||||||||
11029489-G-C | ** | ||||||||
13272992-C-A | 11117316-C-A | ** | |||||||
13461636-C-T | 11305960-C-T | ** | |||||||
13504676-G-T | 11349000-G-T | ** | |||||||
13520426-G-A | 11364750-G-A | ** | |||||||
13576521-C-A | 11420845-C-A | ** | |||||||
11674917-G-T | FT451362 | ** | |||||||
13856382-C-A | 11735676-C-A | ** | |||||||
13857794-TG-T | 11737088-TG-T | ** | |||||||
13861000-G-A | 11740294-G-A | ** | |||||||
13879109-T-C | 11758403-T-C | ** | |||||||
13880014-G-A | 11759308-G-A | ** | |||||||
13890463-G-T | 11769757-G-T | ** | |||||||
13929127-G-T | 11808421-G-T | ** | |||||||
13935169-C-A | 11814463-C-A | ** | |||||||
14032090-C-A | 11911384-C-A | ** | |||||||
14032153-G-T | 11911447-G-T | ** | |||||||
14054033-C-A | 11933327-C-A | ** | |||||||
14107096-C-T | 11986390-C-T | ** | |||||||
14153437-A-G | 12032731-A-G | ** | |||||||
14187166-T-C | 12066460-T-C | ** | |||||||
14225722-C-A | 12105016-C-A | ** | |||||||
14267487-G-T | 12146781-G-T | ** | |||||||
14269703-G-T | 12148997-G-T | ** | |||||||
14272180-C-A | 12151474-C-A | ** | |||||||
14456483-G-A | 12335756-G-A | ** | |||||||
14482281-G-T | 12361550-G-T | ** | |||||||
14700852-T-C | 12588918-T-C | ** | |||||||
14716633-C-A | 12604701-C-A | ** | |||||||
14764991-C-A | 12653060-C-A | ** | |||||||
14799940-A-G | 12688011-A-G | ** | |||||||
14832007-C-T | 12720074-C-T | ** | |||||||
14858698-C-A | 12746764-C-A | ** | |||||||
15047458-C-G | 12935549-C-G | ** | |||||||
15093719-C-T | 12981807-C-T | ** | |||||||
15115546-G-A | 13003633-G-A | ** | |||||||
15177866-C-A | 13065952-C-A | ** | |||||||
15279206-G-T | 13167305-G-T | FT186844 | 13×T | ** | |||||
15280388-A-T | 13168487-A-T | ** | |||||||
15297559-G-T | 13185658-G-T | ** | |||||||
15396959-C-A | 13285079-C-A | ** | |||||||
15475230-T-G | 13363350-T-G | ** | |||||||
15650531-A-G | 13538651-A-G | ** | |||||||
15742466-C-A | 13630586-C-A | ** | |||||||
15844742-G-A | 13732862-G-A | ** | |||||||
15863221-A-G | 13751341-A-G | ** | |||||||
15909480-C-T | 13797600-C-T | ** | |||||||
15909482-A-T | 13797602-A-T | ** | |||||||
15909493-G-A | 13797613-G-A | ** | |||||||
15909494-A-G | 13797614-A-G | ** | |||||||
15909495-T-C | 13797615-T-C | ** | |||||||
15936990-C-A | 13825110-C-A | ** | |||||||
16050062-A-G | 13938182-A-G | ** | |||||||
16065470-CCATCAGACTAA-C | 13953590-CCATCAGACTAA-C | ** | |||||||
16071268-G-C | 13959388-G-C | ** | |||||||
16344957-G-A | 14233077-G-A | ** | |||||||
16405600-A-T | 14293720-A-T | ** | |||||||
16575131-C-A | 14463251-C-A | ** | |||||||
16989141-A-G | 14877261-A-G | ** | |||||||
16989314-C-A | 14877434-C-A | ** | |||||||
17063670-G-A | 14951790-G-A | ** | |||||||
17122393-C-A | 15010513-C-A | ** | |||||||
17213495-G-A | 15101615-G-A | ** | |||||||
17343553-C-A | 15231673-C-A | FT187683 | ** | ||||||
17453858-G-T | 15341978-G-T | ** | |||||||
17480051-T-A | 15368171-T-A | ** | |||||||
17480058-A-T | 15368178-A-T | ** | |||||||
17480061-GT-G | 15368181-GT-G | ** | |||||||
17483433-G-T | 15371553-G-T | ** | |||||||
17483476-C-T | 15371596-C-T | ** | |||||||
17486212-C-A | 15374332-C-A | ** | |||||||
17490124-T-C | 15378244-T-C | ** | |||||||
17503284-C-A | 15391404-C-A | ** | |||||||
17504697-C-A | 15392817-C-A | ** | |||||||
17605174-G-T | 15493294-G-T | ** | |||||||
17716772-A-G | 15604892-A-G | ** | |||||||
17955962-T-C | 15844082-T-C | ** | |||||||
18055061-G-A | 15943181-G-A | ** | |||||||
18156239-G-T | 16044359-G-T | ** | |||||||
18156748-A-G | 16044868-A-G | ** | |||||||
18183292-G-T | 16071412-G-T | ** | |||||||
18191783-T-A | 16079903-T-A | ** | |||||||
18230605-TA-T | 16118725-TA-T | ** | |||||||
18346547-C-T | 16234667-C-T | P6_Prx | ** | ||||||
18411295-A-G | 16299415-A-G | P6_Gap | ** | ||||||
18504913-G-T | 16393033-G-T | P6_Dst | ** | ||||||
18540199-G-T | 16428319-G-T | ** | |||||||
18540446-C-A | 16428566-C-A | ** | |||||||
18618384-C-T | 16506504-C-T | FT24343 | ** | ||||||
18902806-C-A | 16790926-C-A | ** | |||||||
18930066-C-A | 16818186-C-A | FT43192 | ** | ||||||
18955747-A-C | 16843867-A-C | ** | |||||||
19248420-G-A | 17136540-G-A | ** | |||||||
19324301-C-G | 17212421-C-G | ** | |||||||
19532578-C-A | 17420698-C-A | ** | |||||||
19732400-G-A | 17620520-G-A | P5_Prx | ** | ||||||
19744910-T-C | 17633030-T-C | P5_Prx | ** | ||||||
20350311-CAAAAAAA-C | 18188425-CAAAAAAA-C | P5_Dst | 12×A | ** | |||||
20350329-T-C | 18188443-T-C | P5_Dst | ** | ||||||
20350330-G-A | 18188444-G-A | P5_Dst | ** | ||||||
20533369-G-A | 18371483-G-A | P5_Dst | ** | ||||||
20587809-A-ATATT | 18425923-A-ATATT | P5_Dst | ** | ||||||
20648565-AGAAAAG-A | 18486679-AGAAAAG-A | P4_Prx | ** | ||||||
20902316-A-G | 18740430-A-G | P4_Dst | ** | ||||||
21121859-C-A | 18959973-C-A | ** | |||||||
21187782-G-A | 19025896-G-A | ** | |||||||
21353103-C-A | 19191217-C-A | ** | |||||||
21383288-C-A | 19221402-C-A | ** | |||||||
21394854-C-A | 19232968-C-A | ** | |||||||
21447968-A-T | 19286082-A-T | ** | |||||||
21476539-C-A | 19314653-C-A | ** | |||||||
21500335-T-C | 19338449-T-C | ** | |||||||
21589064-T-TC | 19427178-T-TC | ** | |||||||
21632397-G-T | 19470511-G-T | ** | |||||||
21677265-C-A | 19515379-C-A | ** | |||||||
21677371-C-A | 19515485-C-A | ** | |||||||
21846717-G-T | 19684831-G-T | ** | |||||||
21847582-C-A | 19685696-C-A | ** | |||||||
21984025-G-A | 19822139-G-A | ** | |||||||
22090081-T-C | 19928195-T-C | ** | |||||||
22215160-C-A | 20053274-C-A | ** | |||||||
22641706-C-A | 20479820-C-A | ** | |||||||
22882188-G-C | 20720302-G-C | ** | |||||||
24363854-C-A | 22217707-C-A | ** | |||||||
24406842-C-A | 22260695-C-A | ** | |||||||
26418760-C-A | 24272613-C-A | P1_Y1 | ** | ||||||
26921853-G-T | 24775706-G-T | P1_r3 | ** | ||||||
27756143-C-A | 25609996-C-A | P1_Y2 | ** | ||||||
27908263-T-TC | 25762116-T-TC | P1_Y2 | ** | ||||||
27959343-A-AC | 25813196-A-AC | P1_Y2 | ** | ||||||
27966884-TA-T | 25820737-TA-T | P1_Y2 | ** | ||||||
28461722-CTTTTT-C | 26315575-CTTTTT-C | 19×T | ** | ||||||
28507312-C-T | 26361165-C-T | ** | |||||||
28534637-G-A | 26388490-G-A | ** | |||||||
28539305-G-T | 26393158-G-T | ** | |||||||
28548957-G-T | 26402810-G-T | ** | |||||||
28550547-G-T | 26404400-G-T | ** | |||||||
28613446-C-A | 26467299-C-A | ** | |||||||
28617548-G-A | 26471401-G-A | ** | |||||||
28640324-G-C | 26494177-G-C | ** | |||||||
28648354-C-A | 26502207-C-A | ** | |||||||
28648610-T-A | 26502463-T-A | ** | |||||||
28655459-C-A | 26509312-C-A | ** | |||||||
28732055-G-A | 26585908-G-A | FT44631 | ** | ||||||
56828142-T-C | ** | ||||||||
56828770-AGTCCATTCCATTCCT-A | ** | ||||||||
56850055-C-T | ** | ||||||||
22293622-T-A | 20131736-T-A | DYZ19 | *** | ||||||
25776701-T-A | 23630554-T-A | P1_b3 | *** | ||||||
2824720-A-C | 2956679-A-C | *** | |||||||
6873469-CA-C | 7005428-CA-C | 10×A | *** | ||||||
13809724-G-A | 11689018-G-A | *** | |||||||
13489318-CCT-C | 11333642-CCT-C | *** | |||||||
22487669-A-G | 20325783-A-G | BY22095 | DYZ19 | *** | |||||
22243632-C-T | 20081746-C-T | DYZ19 | *** | ||||||
22422648-G-T | 20260762-G-T | DYZ19 | *** | ||||||
25105515-C-A | 22959368-C-A | g1 | *** | ||||||
25289981-A-T | 23143834-A-T | P2_r1 | *** | ||||||
58973176-T-C | 56827029-T-C | *** | |||||||
58972878-C-T | 56826731-C-T | *** | |||||||
23263744-G-A | 21101858-G-A | FT399257 | *** | ||||||
28786678-GGAA-G | 26640531-GGAA-G | *** | |||||||
56844352-G-T | *** | ||||||||
10755334-C-G,T | *** | ||||||||
17375302-G-T | 15263422-G-T | *** | |||||||
13522131-G-T | 11366455-G-T | *** | |||||||
7246174-CAAA-C,CAA | 7378133-CAAA-C,CAA | 15×A | *** | ||||||
19520865-AAG-A | 17408985-AAG-A | *** | |||||||
6978265-C-A | 7110224-C-A | *** | |||||||
13461065-G-C | 11305389-G-C | *** | |||||||
10763328-T-A | *** | ||||||||
10763417-A-G | FT430143 | *** | |||||||
10980693-T-C | *** | ||||||||
11003777-C-A | *** | ||||||||
15956866-C-T | 13844986-C-T | 15×T | *** | ||||||
7043510-G-A | 7175469-G-A | *** | |||||||
16929875-C-A | 14817995-C-A | *** | |||||||
14372869-TCCC-T | 12252165-TCCC-T | 12×C | *** | ||||||
22829644-CAA-C,CA | 20667758-CAA-C,CA | 18×A | *** | ||||||
18855403-CTTT-C,CTT | 16743523-CTTT-C,CTT | 14×T | *** | ||||||
10935519-CTCCTT-C,CTCCAT | *** | ||||||||
13478293-T-A | 11322617-T-A | *** | |||||||
14385201-C-A | 12264497-C-A | BY95368 | *** | ||||||
15423474-CAAAA-C,CAAAAA | 13311594-CAAAA-C,CAAAAA | 16×A | *** | ||||||
7448494-G-T | 7580453-G-T | IR1_L | *** | ||||||
22869879-C-A | 20707993-C-A | *** | |||||||
4439625-C-A | 4571584-C-A | *** | |||||||
6671518-T-A | 6803477-T-A | *** | |||||||
7222048-ATTT-A | 7354007-ATTT-A | 14×T | *** | ||||||
7255096-T-C | 7387055-T-C | *** | |||||||
7868946-A-C | 8000905-A-C | *** | |||||||
8119489-GTT-G,GT | 8251448-GTT-G,GT | 14×T | *** | ||||||
9934530-C-A | 10096921-C-A | *** | |||||||
10755391-CATCT-A,CCTCT | *** | ||||||||
10794748-C-A | *** | ||||||||
13643226-T-C | 11487550-T-C | *** | |||||||
21394645-C-A | 19232759-C-A | *** | |||||||
22485861-C-A | 20323975-C-A | DYZ19 | *** | ||||||
23655532-G-T | 21493646-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.