Cullen
FTDNA: 412477, BigY2: 412477MDKA Birth: Ireland
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 412477 | BigY2 412477 |
---|---|---|---|---|---|---|---|---|---|
6173364-A-G | 6305323-A-G | IR3_Dst | *** | A* | |||||
2739932-GTTTT-G | 2871891-GTTTT-G | 10×T | + | + | |||||
21210680-T-C | 19048794-T-C | BY17870 | Y | Y | + | + | |||
22680572-T-A | 20518686-T-A | BY17880 | Y | Y | + | + | |||
22687024-G-C | 20525138-G-C | Y109473 | Y | Y | + | + | |||
23819430-T-C | 21657544-T-C | BY148008 | Y | + | + | ||||
15627535-C-A | 13515655-C-A | CTS4388 | ** | ||||||
14825822-TTC-T | 12713889-TTC-T | ** | |||||||
16279564-C-A | 14167684-C-A | ** | |||||||
16645672-C-T | 14533792-C-T | FT301438 | ** | ||||||
7536201-A-G | 7668160-A-G | ** | |||||||
7536255-G-T | 7668214-G-T | ** | |||||||
18007416-A-G | 15895536-A-G | P7_Gap | ** | ||||||
9956380-AG-A | 10118771-AG-A | ** | |||||||
13937339-C-A | 11816633-C-A | FGC42958 | FGC55497 | ** | |||||
15770486-C-A | 13658606-C-A | FT22272 | ** | ||||||
6807939-C-A | 6939898-C-A | ** | |||||||
58989619-A-G | 56843472-A-G | ** | |||||||
10780065-C-A | ** | ||||||||
13324769-C-A | 11169093-C-A | ** | |||||||
5817910-C-A | 5949869-C-A | ** | |||||||
14212305-C-A | 12091599-C-A | ** | |||||||
8016938-C-T | 8148897-C-T | 25×T | ** | ||||||
8181347-T-C | 8313306-T-C | ** | |||||||
4136944-C-A | 4268903-C-A | ** | |||||||
10763049-T-C | ** | ||||||||
17535468-C-A | 15423588-C-A | FGC16699 | ** | ||||||
10808995-T-C | ** | ||||||||
7159088-C-A | 7291047-C-A | ** | |||||||
28648581-C-A | 26502434-C-A | ** | |||||||
13874034-C-A | 11753328-C-A | ** | |||||||
4416881-AAAA-C | 4548840-AAAA-C | ** | |||||||
23802064-G-C | 21640178-G-C | ** | |||||||
11653067-N-A | DYZ17 | ** | |||||||
11653068-N-G | DYZ17 | ** | |||||||
11653074-N-T | DYZ17 | ** | |||||||
11653078-N-T | DYZ17 | ** | |||||||
11653080-N-T | DYZ17 | ** | |||||||
11653081-N-T | DYZ17 | ** | |||||||
11653082-N-T | DYZ17 | ** | |||||||
11653084-N-G | DYZ17 | ** | |||||||
11653086-N-G | DYZ17 | ** | |||||||
11653088-N-G | DYZ17 | ** | |||||||
11653094-N-G | DYZ17 | ** | |||||||
11653095-N-A | DYZ17 | ** | |||||||
11653099-N-A | DYZ17 | ** | |||||||
11653101-N-A | DYZ17 | ** | |||||||
11653102-N-TGCTATGTAATCAATTAGAAAGGAAAGGAATGCAATTGAGTGGA | DYZ17 | ** | |||||||
18990923-C-A | 16879043-C-A | ** | |||||||
14700731-C-A | 12588797-C-A | ** | |||||||
11033426-C-A | ** | ||||||||
8181341-A-G | 8313300-A-G | A3725 | ** | ||||||
8181356-C-T | 8313315-C-T | ** | |||||||
22345735-T-C | 20183849-T-C | DYZ19 | ** | ||||||
13239865-G-T | 11084189-G-T | ** | |||||||
56823349-G-T | ** | ||||||||
10979947-G-T | ** | ||||||||
10947055-C-A | ** | ||||||||
4241381-C-A | 4373340-C-A | ** | |||||||
22842207-C-A | 20680321-C-A | ** | |||||||
5613489-C-A | 5745448-C-A | ** | |||||||
3849076-T-C | 3981035-T-C | ** | |||||||
11674738-CGAATG-C | DYZ17 | ** | |||||||
5446470-C-A | 5578429-C-A | ** | |||||||
8181321-G-A | 8313280-G-A | ** | |||||||
8181340-C-T | 8313299-C-T | ** | |||||||
2810427-C-T | 2942386-C-T | ** | |||||||
4863324-G-T | 4995283-G-T | ** | |||||||
23041187-C-T | 20879301-C-T | ** | |||||||
17440640-C-A | 15328760-C-A | ** | |||||||
6478584-C-A | 6610543-C-A | ** | |||||||
28688288-C-A | 26542141-C-A | ** | |||||||
6688658-C-A | 6820617-C-A | ** | |||||||
13213587-C-A | 11057911-C-A | ** | |||||||
23355347-C-A | 21193461-C-A | ** | |||||||
10834183-C-T | ** | ||||||||
7717677-T-C | 7849636-T-C | ** | |||||||
15912055-CTTTTTT-C | 13800175-CTTTTTT-C | 21×T | ** | ||||||
13233201-G-T | 11077525-G-T | ** | |||||||
14420297-C-A | 12299572-C-A | ** | |||||||
10795292-C-A | ** | ||||||||
56849087-T-A | ** | ||||||||
22241458-C-A | 20079572-C-A | DYZ19 | ** | ||||||
10834162-AT-A | ** | ||||||||
10834168-T-TC | ** | ||||||||
10834177-A-T | ** | ||||||||
10834184-T-G | ** | ||||||||
7536252-G-C | 7668211-G-C | ** | |||||||
7536274-C-G | 7668233-C-G | ** | |||||||
15558041-C-A | 13446161-C-A | ** | |||||||
14019725-C-A | 11899019-C-A | ** | |||||||
10818640-C-A | ** | ||||||||
11653076-N-A | DYZ17 | ** | |||||||
15899023-C-A | 13787143-C-A | ** | |||||||
11650626-C-A | DYZ17 | ** | |||||||
13880907-C-A | 11760201-C-A | ** | |||||||
14263198-C-A | 12142492-C-A | ** | |||||||
7536270-G-A | 7668229-G-A | ** | |||||||
7256115-G-C | 7388074-G-C | ** | |||||||
10939080-G-A | ** | ||||||||
13861020-G-T | 11740314-G-T | DYZ17 | ** | ||||||
10843363-A-C | ** | ||||||||
10939124-G-T | ** | ||||||||
7224104-C-A | 7356063-C-A | ** | |||||||
10927495-TC-T | ** | ||||||||
7758189-C-A | 7890148-C-A | ** | |||||||
28688215-C-A | 26542068-C-A | ** | |||||||
28709008-C-A | 26562861-C-A | ** | |||||||
21919356-C-A | 19757470-C-A | ** | |||||||
10889105-G-T | ** | ||||||||
15252795-C-A | 13140881-C-A | ** | |||||||
13461160-C-G | 11305484-C-G | ** | |||||||
16001014-C-A | 13889134-C-A | ** | |||||||
5524949-C-A | 5656908-C-A | ** | |||||||
10763040-C-G | ** | ||||||||
2865816-C-A | 2997775-C-A | FT85409 | ** | ||||||
19044573-C-A | 16932693-C-A | ** | |||||||
14532057-C-A | 12420258-C-A | ** | |||||||
10999538-C-A | ** | ||||||||
2669950-C-A | 2801909-C-A | ** | |||||||
2784521-C-G | 2916480-C-G | ** | |||||||
2859089-T-C | 2991048-T-C | ** | |||||||
2958550-T-G | 3090509-T-G | ** | |||||||
3051097-C-A | 3183056-C-A | ** | |||||||
3110268-G-T | 3242227-G-T | ** | |||||||
3121240-T-C | 3253199-T-C | ** | |||||||
3121340-G-T | 3253299-G-T | ** | |||||||
3122208-C-T | 3254167-C-T | ** | |||||||
3165198-T-C | 3297157-T-C | ** | |||||||
3179185-C-A | 3311144-C-A | ** | |||||||
3275455-A-C | 3407414-A-C | ** | |||||||
3283735-C-A | 3415694-C-A | ** | |||||||
3302394-G-C | 3434353-G-C | ** | |||||||
3327343-G-T | 3459302-G-T | ** | |||||||
3366452-AT-A | 3498411-AT-A | ** | |||||||
3373727-T-G | 3505686-T-G | ** | |||||||
3388636-A-T | 3520595-A-T | ** | |||||||
3397103-C-A | 3529062-C-A | ** | |||||||
3407786-T-C | 3539745-T-C | ** | |||||||
3430028-C-T | 3561987-C-T | ** | |||||||
3497715-G-T | 3629674-G-T | ** | |||||||
3602608-G-T | 3734567-G-T | ** | |||||||
3605943-C-G | 3737902-C-G | ** | |||||||
3853438-C-A | 3985397-C-A | ** | |||||||
3890452-ATT-G | 4022411-ATT-G | ** | |||||||
3991849-C-A | 4123808-C-A | ** | |||||||
4108644-A-G | 4240603-A-G | ** | |||||||
4191923-G-T | 4323882-G-T | ** | |||||||
4255191-A-C | 4387150-A-C | ** | |||||||
4454411-C-A | 4586370-C-A | ** | |||||||
4505339-C-T | 4637298-C-T | ** | |||||||
4687176-C-A | 4819135-C-A | ** | |||||||
4719517-C-A | 4851476-C-A | ** | |||||||
4906338-T-G | 5038297-T-G | ** | |||||||
4925961-G-T | 5057920-G-T | ** | |||||||
4928922-AT-A | 5060881-AT-A | ** | |||||||
4961410-G-T | 5093369-G-T | ** | |||||||
5017536-G-T | 5149495-G-T | ** | |||||||
5177093-C-A | 5309052-C-A | ** | |||||||
5214039-C-A | 5345998-C-A | ** | |||||||
5215784-T-C | 5347743-T-C | ** | |||||||
5294519-TA-T | 5426478-TA-T | ** | |||||||
5319562-A-G | 5451521-A-G | ** | |||||||
5336955-C-T | 5468914-C-T | ** | |||||||
5398272-C-A | 5530231-C-A | ** | |||||||
5398318-C-A | 5530277-C-A | ** | |||||||
5451509-G-T | 5583468-G-T | ** | |||||||
5451729-G-T | 5583688-G-T | ** | |||||||
5508376-C-A | 5640335-C-A | ** | |||||||
5525876-A-G | 5657835-A-G | ** | |||||||
5525946-C-T | 5657905-C-T | ** | |||||||
5537404-C-A | 5669363-C-A | ** | |||||||
5537502-C-A | 5669461-C-A | ** | |||||||
5600512-G-T | 5732471-G-T | ** | |||||||
5620512-C-A | 5752471-C-A | ** | |||||||
5658640-C-A | 5790599-C-A | ** | |||||||
5715895-T-A | 5847854-T-A | ** | |||||||
5836059-C-A | 5968018-C-A | ** | |||||||
5851304-A-G | 5983263-A-G | ** | |||||||
5874197-A-G | 6006156-A-G | ** | |||||||
5926812-G-A | 6058771-G-A | ** | |||||||
6039616-G-A | 6171575-G-A | ** | |||||||
6096983-T-C | 6228942-T-C | ** | |||||||
6148604-G-A | 6280563-G-A | IR3_Dst | ** | ||||||
6247163-C-T | 6379122-C-T | IR3_Dst | ** | ||||||
6358819-G-A | 6490778-G-A | ** | |||||||
6510045-C-A | 6642004-C-A | ** | |||||||
6682134-G-T | 6814093-G-T | ** | |||||||
6731023-G-A | 6862982-G-A | ** | |||||||
6755915-G-T | 6887874-G-T | ** | |||||||
6770068-A-T | 6902027-A-T | ** | |||||||
6770715-C-T | 6902674-C-T | ** | |||||||
6822591-C-A | 6954550-C-A | ** | |||||||
7017020-A-G | 7148979-A-G | ** | |||||||
7039966-A-T | 7171925-A-T | ** | |||||||
7054219-A-G | 7186178-A-G | ** | |||||||
7054232-C-A | 7186191-C-A | ** | |||||||
7080848-C-A | 7212807-C-A | ** | |||||||
7093314-GC-G | 7225273-GC-G | ** | |||||||
7107325-C-T | 7239284-C-T | ** | |||||||
7152862-T-A | 7284821-T-A | ** | |||||||
7188386-G-C | 7320345-G-C | ** | |||||||
7225657-C-A | 7357616-C-A | ** | |||||||
7303576-C-A | 7435535-C-A | ** | |||||||
7319134-C-A | 7451093-C-A | ** | |||||||
7348740-G-T | 7480699-G-T | ** | |||||||
7363788-T-C | 7495747-T-C | ** | |||||||
7381597-C-A | 7513556-C-A | ** | |||||||
7433773-C-A | 7565732-C-A | ** | |||||||
7536194-C-T | 7668153-C-T | ** | |||||||
7536207-G-A | 7668166-G-A | ** | |||||||
7536212-C-G | 7668171-C-G | ** | |||||||
7536262-C-T | 7668221-C-T | ** | |||||||
7536275-T-C | 7668234-T-C | ** | |||||||
7536281-T-C | 7668240-T-C | ** | |||||||
7536317-G-A | 7668276-G-A | ** | |||||||
7572874-C-A | 7704833-C-A | ** | |||||||
7645261-G-A | 7777220-G-A | ** | |||||||
7757030-C-T | 7888989-C-T | ** | |||||||
7758967-A-G | 7890926-A-G | ** | |||||||
7832249-C-A | 7964208-C-A | ** | |||||||
7869118-C-A | 8001077-C-A | ** | |||||||
7991098-C-A | 8123057-C-A | ** | |||||||
8181315-C-T | 8313274-C-T | ** | |||||||
8181346-C-A | 8313305-C-A | ** | |||||||
8293001-T-A | 8424960-T-A | ** | |||||||
8792956-C-A | 8924915-C-A | ** | |||||||
8901991-CTTTTTTT-C | 9033950-CTTTTTTT-C | 19×T | ** | ||||||
8914441-C-A | 9046400-C-A | ** | |||||||
9109548-T-G | ** | ||||||||
9025451-C-G | 9187842-C-G | ** | |||||||
9416907-G-A | 9579298-G-A | ** | |||||||
9440528-T-A | 9602919-T-A | ** | |||||||
9499166-A-C | 9661557-A-C | ** | |||||||
9514890-T-A | 9677281-T-A | ** | |||||||
9674894-C-A | 9837285-C-A | IR3_Prx | ** | ||||||
9899565-A-C | 10061956-A-C | ** | |||||||
9938546-C-A | 10100937-C-A | ** | |||||||
10014804-G-T | 10177195-G-T | ** | |||||||
10624447-A-G | ** | ||||||||
10654553-C-A | ** | ||||||||
10663833-ATTCCACTCCAT-A | ** | ||||||||
10669347-T-G | ** | ||||||||
10683672-CTCCAT-C | ** | ||||||||
10686807-C-A | ** | ||||||||
10693041-G-T | ** | ||||||||
10693158-C-A | ** | ||||||||
10693564-C-G | ** | ||||||||
10753491-C-A | ** | ||||||||
10766677-C-A | ** | ||||||||
10767110-C-T | ** | ||||||||
10779415-C-A | ** | ||||||||
10794494-C-A | ** | ||||||||
10796057-T-C | ** | ||||||||
10816267-C-A | ** | ||||||||
10817442-C-A | ** | ||||||||
10828610-C-A | ** | ||||||||
10830485-G-T | ** | ||||||||
10831667-G-T | ** | ||||||||
10833680-C-T | FT433297 | ** | |||||||
10833681-A-G | ** | ||||||||
10842491-T-C | ** | ||||||||
10847222-C-A | FT433911 | ** | |||||||
10858910-C-T | ** | ||||||||
10866628-G-T | ** | ||||||||
10867712-C-A | ** | ||||||||
10874446-C-A | ** | ||||||||
10884381-C-A | ** | ||||||||
10884412-C-A | ** | ||||||||
10890365-C-A | ** | ||||||||
10917899-AGAT-A | ** | ||||||||
10922275-T-C | ** | ||||||||
10925426-C-T | ** | ||||||||
10933322-T-C | ** | ||||||||
10935934-C-A | ** | ||||||||
10936548-G-T | ** | ||||||||
10938985-T-C | ** | ||||||||
10941160-C-T | ** | ||||||||
10950029-C-A | ** | ||||||||
10951421-G-C | ** | ||||||||
10956491-T-G | ** | ||||||||
10962857-G-T | ** | ||||||||
10969740-A-G | ** | ||||||||
10972344-C-A | ** | ||||||||
10984913-C-G | ** | ||||||||
10984937-T-G | ** | ||||||||
10986688-C-CTCCAA | ** | ||||||||
10995459-A-G | ** | ||||||||
10996281-T-C | ** | ||||||||
10996917-C-A | ** | ||||||||
10999289-T-G | ** | ||||||||
11007656-C-T | FT393480 | ** | |||||||
11007663-C-T | ** | ||||||||
11007670-C-T | FT393481 | ** | |||||||
11007672-CTGTTT-C | ** | ||||||||
11007680-C-T | ** | ||||||||
11009822-C-A | ** | ||||||||
11011530-T-C | FT393612 | ** | |||||||
11021247-G-T | ** | ||||||||
11023099-C-G | ** | ||||||||
13198001-A-G | 11042325-A-G | FT440569 | ** | ||||||
13235531-A-G | 11079855-A-G | ** | |||||||
13256356-C-T | 11100680-C-T | ** | |||||||
13302427-C-A | 11146751-C-A | ** | |||||||
13330219-A-T | 11174543-A-T | ** | |||||||
13428438-C-A | 11272762-C-A | ** | |||||||
13460706-A-G | 11305030-A-G | ** | |||||||
13462299-C-A | 11306623-C-A | ** | |||||||
13501945-T-A | 11346269-T-A | ** | |||||||
13501950-C-A | 11346274-C-A | ** | |||||||
13513010-A-G | 11357334-A-G | ** | |||||||
11643643-G-A | DYZ17 | ** | |||||||
11646054-A-T | DYZ17 | ** | |||||||
11650763-A-T | DYZ17 | ** | |||||||
11664570-G-C | DYZ17 | ** | |||||||
11666821-A-T | DYZ17 | ** | |||||||
11670942-G-C | DYZ17 | ** | |||||||
11670971-G-C | DYZ17 | ** | |||||||
13856770-T-C | 11736064-T-C | FT307733 | DYZ17 | ** | |||||
13894441-C-A | 11773735-C-A | ** | |||||||
13899058-T-A | 11778352-T-A | ** | |||||||
13899443-C-A | 11778737-C-A | ** | |||||||
13909786-G-T | 11789080-G-T | ** | |||||||
14036079-T-A | 11915373-T-A | ** | |||||||
14052864-T-C | 11932158-T-C | ** | |||||||
14065509-C-A | 11944803-C-A | ** | |||||||
14195944-G-A | 12075238-G-A | ** | |||||||
14233374-C-A | 12112668-C-A | ** | |||||||
14255782-A-G | 12135076-A-G | ** | |||||||
14284680-A-G | 12163974-A-G | ** | |||||||
14295349-G-T | 12174643-G-T | ** | |||||||
14345009-C-A | 12224304-C-A | ** | |||||||
14371399-C-A | 12250695-C-A | ** | |||||||
14385366-G-T | 12264662-G-T | ** | |||||||
14387742-C-A | 12267038-C-A | ** | |||||||
14431383-TA-T | 12310656-TA-T | ** | |||||||
14431462-A-G | 12310735-A-G | ** | |||||||
14458074-T-A | 12337347-T-A | ** | |||||||
14467740-TG-T | 12347009-TG-T | ** | |||||||
14523369-G-A | 12411570-G-A | ** | |||||||
14525928-C-A | 12414129-C-A | ** | |||||||
14635580-T-G | 12523649-T-G | ** | |||||||
14695484-A-G | 12583550-A-G | ** | |||||||
14786313-T-C | 12674383-T-C | ** | |||||||
14787869-C-A | 12675940-C-A | ** | |||||||
14795676-A-G | 12683747-A-G | ** | |||||||
14803085-A-G | 12691156-A-G | ** | |||||||
14960320-A-G | 12848395-A-G | ** | |||||||
15011647-C-A | 12899735-C-A | ** | |||||||
15183804-C-A | 13071890-C-A | ** | |||||||
15202447-T-G | 13090533-T-G | ** | |||||||
15276811-T-A | 13164900-T-A | ** | |||||||
15280587-C-A | 13168686-C-A | ** | |||||||
15334625-A-T | 13222743-A-T | ** | |||||||
15370238-G-T | 13258358-G-T | ** | |||||||
15397233-A-G | 13285353-A-G | ** | |||||||
15446829-A-G | 13334949-A-G | ** | |||||||
15729149-G-A | 13617269-G-A | ** | |||||||
15732763-T-G | 13620883-T-G | ** | |||||||
15774197-G-A | 13662317-G-A | ** | |||||||
15774219-T-C | 13662339-T-C | ** | |||||||
15774220-G-C | 13662340-G-C | ** | |||||||
15776152-T-C | 13664272-T-C | ** | |||||||
15785938-C-A | 13674058-C-A | ** | |||||||
15918634-T-C | 13806754-T-C | ** | |||||||
15937106-C-A | 13825226-C-A | ** | |||||||
15943933-G-C | 13832053-G-C | ** | |||||||
15971709-T-G | 13859829-T-G | 16×TG | ** | ||||||
15987536-G-C | 13875656-G-C | ** | |||||||
16055525-C-A | 13943645-C-A | ** | |||||||
16057188-G-A | 13945308-G-A | ** | |||||||
16073248-G-T | 13961368-G-T | ** | |||||||
16075318-C-A | 13963438-C-A | ** | |||||||
16095789-C-A | 13983909-C-A | ** | |||||||
16152216-C-CAT | 14040336-C-CAT | P8_Dst | ** | ||||||
16309374-C-A | 14197494-C-A | ** | |||||||
16405478-T-G | 14293598-T-G | ** | |||||||
16421762-C-A | 14309882-C-A | ** | |||||||
16493052-T-C | 14381172-T-C | ** | |||||||
16503778-C-A | 14391898-C-A | ** | |||||||
16605500-C-A | 14493620-C-A | ** | |||||||
16635994-T-C | 14524114-T-C | ** | |||||||
16738169-C-T | 14626289-C-T | ** | |||||||
16868758-TATATATATATATATATATATATATA-T | 14756878-TATATATATATATATATATATATATA-T | ** | |||||||
16945536-A-G | 14833656-A-G | ** | |||||||
16945557-T-C | 14833677-T-C | ** | |||||||
17013293-C-A | 14901413-C-A | ** | |||||||
17085757-C-T | 14973877-C-T | ** | |||||||
17085764-T-C | 14973884-T-C | ** | |||||||
17085773-G-C | 14973893-G-C | ** | |||||||
17159012-T-G | 15047132-T-G | ** | |||||||
17374333-C-A | 15262453-C-A | ** | |||||||
17512044-G-A | 15400164-G-A | ** | |||||||
17597785-C-A | 15485905-C-A | ** | |||||||
17737799-A-C | 15625919-A-C | ** | |||||||
17920869-G-C | 15808989-G-C | ** | |||||||
17946892-T-C | 15835012-T-C | ** | |||||||
18007445-C-G | 15895565-C-G | P7_Gap | ** | ||||||
18007483-T-A | 15895603-T-A | P7_Gap | ** | ||||||
18007503-C-T | 15895623-C-T | P7_Gap | ** | ||||||
18121619-G-A | 16009739-G-A | ** | |||||||
18701757-T-C | 16589877-T-C | ** | |||||||
18768340-G-A | 16656460-G-A | ** | |||||||
18801116-C-A | 16689236-C-A | ** | |||||||
18855805-C-T | 16743925-C-T | ** | |||||||
19012414-T-A | 16900534-T-A | ** | |||||||
19075153-G-T | 16963273-G-T | ** | |||||||
19122078-C-A | 17010198-C-A | ** | |||||||
19244918-G-A | 17133038-G-A | ** | |||||||
19250036-A-G | 17138156-A-G | ** | |||||||
19302313-A-G | 17190433-A-G | ** | |||||||
19302377-A-T | 17190497-A-T | ** | |||||||
19399907-A-C | 17288027-A-C | ** | |||||||
19417502-A-T | 17305622-A-T | ** | |||||||
19463475-A-G | 17351595-A-G | ** | |||||||
19529468-C-A | 17417588-C-A | ** | |||||||
19539888-C-A | 17428008-C-A | ** | |||||||
19544349-CT-C | 17432469-CT-C | ** | |||||||
19643547-C-A | 17531667-C-A | P5_Prx | ** | ||||||
20693159-G-C | 18531273-G-C | P4_Prx | ** | ||||||
20693218-G-C | 18531332-G-C | P4_Prx | ** | ||||||
20774942-A-G | 18613056-A-G | P4_Prx | ** | ||||||
20921163-T-C | 18759277-T-C | P4_Dst | ** | ||||||
21042330-T-C | 18880444-T-C | ** | |||||||
21141385-G-A | 18979499-G-A | ** | |||||||
21141395-T-C | 18979509-T-C | ** | |||||||
21177024-C-T | 19015138-C-T | ** | |||||||
21200245-G-A | 19038359-G-A | ** | |||||||
21201209-A-G | 19039323-A-G | ** | |||||||
21238113-T-C | 19076227-T-C | ** | |||||||
21267991-C-A | 19106105-C-A | ** | |||||||
21281332-G-A | 19119446-G-A | ** | |||||||
21408306-G-A | 19246420-G-A | ** | |||||||
21473978-G-A | 19312092-G-A | ** | |||||||
21770145-TG-T | 19608259-TG-T | ** | |||||||
21790102-G-T | 19628216-G-T | ** | |||||||
21803324-C-A | 19641438-C-A | FT144296 | ** | ||||||
21912447-T-C | 19750561-T-C | ** | |||||||
21912459-T-A | 19750573-T-A | ** | |||||||
21946445-CT-C | 19784559-CT-C | ** | |||||||
22135473-G-A | 19973587-G-A | FT10894 | ** | ||||||
22241434-A-C | 20079548-A-C | DYZ19 | ** | ||||||
22486224-T-A | 20324338-T-A | DYZ19 | ** | ||||||
22662149-C-A | 20500263-C-A | ** | |||||||
22768164-C-A | 20606278-C-A | ** | |||||||
22800190-T-G | 20638304-T-G | ** | |||||||
22809008-A-T | 20647122-A-T | ** | |||||||
22809772-T-C | 20647886-T-C | ** | |||||||
22842217-T-G | 20680331-T-G | ** | |||||||
22882093-C-A | 20720207-C-A | ** | |||||||
22994925-T-A | 20833039-T-A | ** | |||||||
23018803-T-C | 20856917-T-C | ** | |||||||
23066233-G-A | 20904347-G-A | ** | |||||||
23105717-C-A | 20943831-C-A | ** | |||||||
23184840-G-T | 21022954-G-T | ** | |||||||
23360738-T-C | 21198852-T-C | ** | |||||||
23434354-G-A | 21272468-G-A | ** | |||||||
24403393-C-A | 22257246-C-A | ** | |||||||
24420843-C-A | 22274696-C-A | ** | |||||||
24466368-C-A | 22320221-C-A | FT306934 | ** | ||||||
27862515-A-G | 25716368-A-G | P1_Y2 | ** | ||||||
27982169-C-CAT | 25836022-C-CAT | P1_Y2 | 10×ATT | ** | |||||
28432046-G-T | 26285899-G-T | P1_gr2 | ** | ||||||
28473264-A-G | 26327117-A-G | ** | |||||||
28492516-C-A | 26346369-C-A | ** | |||||||
28506233-A-C | 26360086-A-C | ** | |||||||
28532908-AT-A | 26386761-AT-A | ** | |||||||
28541661-G-T | 26395514-G-T | ** | |||||||
28543348-T-C | 26397201-T-C | ** | |||||||
28544263-C-A | 26398116-C-A | ** | |||||||
28583684-G-T | 26437537-G-T | ** | |||||||
28591739-A-C | 26445592-A-C | ** | |||||||
28594144-A-T | 26447997-A-T | ** | |||||||
28600546-T-C | 26454399-T-C | ** | |||||||
28625527-G-T | 26479380-G-T | ** | |||||||
28638966-A-T | 26492819-A-T | ** | |||||||
28643814-T-A | 26497667-T-A | ** | |||||||
28650854-C-A | 26504707-C-A | ** | |||||||
28688224-T-A | 26542077-T-A | ** | |||||||
28702950-A-T | 26556803-A-T | ** | |||||||
28764219-C-A | 26618072-C-A | ** | |||||||
28802594-G-A | 26656447-G-A | ** | |||||||
28815230-A-C | 26669083-A-C | ** | |||||||
56822359-G-T | ** | ||||||||
56839040-T-G | ** | ||||||||
56840406-A-G | ** | ||||||||
56849055-T-C | ** | ||||||||
56849058-C-T | ** | ||||||||
56849079-T-C | ** | ||||||||
56855834-A-G | ** | ||||||||
18218796-T-G | 16106916-T-G | *** | |||||||
13140123-TC-T | 10629609-TC-T | *** | |||||||
13939033-G-A | 11818327-G-A | *** | |||||||
10016424-C-T | 10178815-C-T | *** | |||||||
22502146-C-A | 20340260-C-A | DYZ19 | *** | ||||||
16964260-GAAAA-G | 14852380-GAAAA-G | 15×A | *** | ||||||
13847250-AATGGC-A | 11726544-AATGGC-A | DYZ17 | *** | ||||||
22295686-A-T | 20133800-A-T | DYZ19 | *** | ||||||
6807715-C-T | 6939674-C-T | Y82587 | *** | ||||||
56742699-A-G | *** | ||||||||
7499418-G-T | 7631377-G-T | FTB25848 | IR1_L | *** | |||||
9034655-CAA-C,CA | 9197046-CAA-C,CA | 12×A | *** | ||||||
10859366-G-T | *** | ||||||||
13466447-G-A | 11310771-G-A | *** | |||||||
11037881-C-A | *** | ||||||||
2708605-T-C | 2840564-T-C | *** | |||||||
2948131-CT-C | 3080090-CT-C | *** | |||||||
10776004-G-A,C | *** | ||||||||
10776361-C-G | *** | ||||||||
10880648-C-A | *** | ||||||||
11644118-G-T | DYZ17 | *** | |||||||
14232889-CCA-C | 12112183-CCA-C | *** | |||||||
14463284-GTTCT-G | 12342557-GTTCT-G | *** | |||||||
15250805-C-A | 13138891-C-A | *** | |||||||
17676309-C-A | 15564429-C-A | *** | |||||||
17864190-C-T | 15752310-C-T | *** | |||||||
18185141-C-T | 16073261-C-T | *** | |||||||
18504916-C-A | 16393036-C-A | P6_Dst | *** | ||||||
18869090-T-A | 16757210-T-A | *** | |||||||
22023219-TTTG-T,TG | 19861333-TTTG-T,TG | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.