Pardy
FGC-BigY: 26BS5Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FGC-BigY 26BS5 |
---|---|---|---|---|---|---|---|---|
4344966-C-G | 4476925-C-G | FGC46894 | + | |||||
4471861-C-A | 4603820-C-A | FGC46895 | + | |||||
4482104-C-T | 4614063-C-T | FGC46896 | + | |||||
8613014-C-G | 8744973-C-G | FGC46905 | Y | Y | + | |||
8908321-C-T | 9040280-C-T | FGC46906 | + | |||||
9022267-C-T | 9184658-C-T | FGC46907 | Y | + | ||||
9818717-C-T | 9981108-C-T | FGC46908 | Y | Y | + | |||
9864728-T-G | 10027119-T-G | FGC46909 | Y | Y | + | |||
14460197-C-T | 12339470-C-T | FGC46914 | Y | Y | + | |||
15025048-G-T | 12913136-G-T | FGC46915 | Y | Y | + | |||
16234318-G-A | 14122438-G-A | FGC46918 | Y | Y | + | |||
16308643-G-T | 14196763-G-T | FGC46919 | Y | Y | + | |||
16410857-C-A | 14298977-C-A | FGC46922 | Y | + | ||||
16513917-T-C | 14402037-T-C | FGC46923 | Y | Y | + | |||
17249273-C-T | 15137393-C-T | FGC46926 | Y | + | ||||
17266783-G-T | 15154903-G-T | FGC46927 | Y | + | ||||
21072261-C-A | 18910375-C-A | FGC46932 | Y | Y | + | |||
22155061-G-A | 19993175-G-A | FGC46936 | Y | + | ||||
22979493-T-C | 20817607-T-C | FGC46939 | Y | Y | + | |||
23814376-A-G | 21652490-A-G | FGC46941 | Y | + | ||||
24424156-T-G | 22278009-T-G | FGC46942 | Y | + | ||||
19302915-GCT-G | 17191035-GCT-G | + | ||||||
7178299-G-C | 7310258-G-C | Z13028 | Y | Y | * | |||
3011982-T-A | 3143941-T-A | FGC46892 | * | |||||
4256852-C-G | 4388811-C-G | FGC46893 | * | |||||
4767966-G-A | 4899925-G-A | FGC46897 | * | |||||
4790970-T-C | 4922929-T-C | FGC46898 | * | |||||
5710249-C-A | 5842208-C-A | FGC46899 | * | |||||
5822672-A-T | 5954631-A-T | FGC46900 | * | |||||
6628564-C-T | 6760523-C-T | FGC46901 | Y | Y | * | |||
6826777-T-G | 6958736-T-G | FGC46902 | Y | Y | * | |||
7211204-G-T | 7343163-G-T | FGC46903 | Y | Y | * | |||
7869717-C-T | 8001676-C-T | FGC46904 Z43260 | Y | Y | * | |||
13345697-G-C | 11190021-G-C | FGC46910 | * | |||||
13848721-T-C | 11728015-T-C | FGC46911 | * | |||||
14063137-C-A | 11942431-C-A | FGC46912 | Y | Y | * | |||
14320485-C-T | 12199779-C-T | FGC46913 | Y | Y | * | |||
15113163-G-A | 13001250-G-A | FGC46916 | Y | Y | * | |||
15350964-C-A | 13239083-C-A | FGC46917 | Y | Y | * | |||
16314868-C-T | 14202988-C-T | FGC46920 | Y | Y | * | |||
16348357-G-A | 14236477-G-A | FGC46921 | Y | Y | * | |||
16684063-C-T | 14572183-C-T | FGC46924 | Y | * | ||||
16897314-T-C | 14785434-T-C | FGC46925 | Y | Y | * | |||
17425056-C-T | 15313176-C-T | FGC46928 | Y | Y | * | |||
17854632-G-A | 15742752-G-A | FGC46929 | Y | * | ||||
18797228-A-G | 16685348-A-G | FGC46930 | Y | * | ||||
20950774-C-T | 18788888-C-T | FGC46931 | P4_Dst | * | ||||
21585666-C-T | 19423780-C-T | FGC46933 | Y | * | ||||
21797677-T-C | 19635791-T-C | FGC46934 | Y | Y | * | |||
21972941-C-G | 19811055-C-G | FGC46935 | Y | Y | * | |||
22526610-C-A | 20364724-C-A | FGC46937 | Y | * | ||||
22923962-G-C | 20762076-G-C | FGC46938 | Y | Y | * | |||
23586096-G-T | 21424210-G-T | FGC46940 | Y | Y | * | |||
22767743-CT-C | 20605857-CT-C | * | ||||||
20084485-C-T | 17972605-C-T | P5_Dst | ** | |||||
22478958-G-C | 20317072-G-C | BY53225 | DYZ19 | ** | ||||
3436380-T-C | 3568339-T-C | L327 | ** | |||||
6410949-AAAAT-A | 6542908-AAAAT-A | 10×AAAT | ** | |||||
6020697-T-G | 6152656-T-G | Z3156 | ** | |||||
4976541-T-C | 5108500-T-C | FT67050 | F9199 FGC18529 | ** | ||||
14533029-G-A | 12421230-G-A | Y91649 | ** | |||||
2817759-T-G | 2949718-T-G | ** | ||||||
4786521-A-G | 4918480-A-G | Y82017 | ** | |||||
4976584-C-T | 5108543-C-T | Y82040 | ** | |||||
5795879-C-T | 5927838-C-T | ** | ||||||
8394207-A-G | 8526166-A-G | ** | ||||||
13693307-A-T | 11537631-A-T | BY211047 | ** | |||||
13717054-C-T | 11561378-C-T | BY181066 | BY54446 | ** | ||||
13964452-C-A | 11843746-C-A | Y89927 | ** | |||||
14533030-C-A | 12421231-C-A | Y91650 | ** | |||||
14673894-T-A | 12561960-T-A | ** | ||||||
14673895-G-A | 12561961-G-A | ** | ||||||
14998620-A-C | 12886705-A-C | ** | ||||||
18123741-T-A | 16011861-T-A | ** | ||||||
19034739-G-T | 16922859-G-T | ** | ||||||
21547449-T-C | 19385563-T-C | ** | ||||||
22021414-A-C | 19859528-A-C | ** | ||||||
22433051-A-G | 20271165-A-G | DYZ19 | ** | |||||
23077104-G-T | 20915218-G-T | ** | ||||||
23812375-C-G | 21650489-C-G | BY180092 | ** | |||||
23825111-G-T | 21663225-G-T | ** | ||||||
23865203-T-C | 21703317-T-C | ** | ||||||
24007258-A-G | 21861111-A-G | ** | ||||||
26212735-C-T | 24066588-C-T | P1_Y1 | ** | |||||
5235847-TACAC-T | 5367806-TACAC-T | 11×AC | ** | |||||
7474374-A-AAGAG | 7606333-A-AAGAG | IR1_L | 21×AG | ** | ||||
8901423-ATGTATATATAATG-A | 9033382-ATGTATATATAATG-A | ** | ||||||
14784680-CATTCTTCTT-C | 12672750-CATTCTTCTT-C | ** | ||||||
16860749-CAAAAAAA-C | 14748869-CAAAAAAA-C | 24×A | ** | |||||
17016177-GTAAA-G | 14904297-GTAAA-G | ** | ||||||
18612142-TCTGTTTCTGAGA-T | 16500262-TCTGTTTCTGAGA-T | ** | ||||||
20931853-A-ATGTG | 18769967-A-ATGTG | P4_Dst | 18×TG | ** | ||||
20084495-C-T | 17972615-C-T | P5_Dst | *** | |||||
20084460-C-T | 17972580-C-T | P5_Dst | *** | |||||
20084470-C-T | 17972590-C-T | P5_Dst | *** | |||||
20084490-C-T | 17972610-C-T | P5_Dst | *** | |||||
22503111-G-C | 20341225-G-C | DYZ19 | *** | |||||
58882934-T-A | 56707937-A-T | *** | ||||||
22343731-G-T | 20181845-G-T | DYZ19 | *** | |||||
13810314-G-C | 11689608-G-C | *** | ||||||
13648168-G-A | 11492492-G-A | *** | ||||||
13698929-A-G | 11543253-A-G | *** | ||||||
13659227-T-G | 11503551-T-G | *** | ||||||
13869400-A-G | 11748694-A-G | *** | ||||||
22247476-A-G | 20085590-A-G | FGC79068 | DYZ19 | *** | ||||
9919309-T-C | 10081700-T-C | *** | ||||||
22503693-T-C | 20341807-T-C | DYZ19 | *** | |||||
6347812-AAG-GAA | 6479771-AAG-GAA | *** | ||||||
10041413-G-T | 10203804-G-T | FGC36476 | *** | |||||
20084465-C-T | 17972585-C-T | BY212108 | P5_Dst | *** | ||||
13489766-AC-CG | 11334090-AC-CG | *** | ||||||
13453414-TATTTCATG-CATTCCATT | 11297738-TATTTCATG-CATTCCATT | *** | ||||||
13704373-GGAAC-AGAAT | 11548697-GGAAC-AGAAT | *** | ||||||
13799101-AACG-GACT | 11678395-AACG-GACT | *** | ||||||
13861527-TA-CT | 11740821-TA-CT | *** | ||||||
13867840-CTC-TTG | 11747134-CTC-TTG | *** | ||||||
13867849-ATCG-CTGT | 11747143-ATCG-CTGT | *** | ||||||
22241598-CAGT-TAGC | 20079712-CAGT-TAGC | DYZ19 | *** | |||||
28587818-TCT-CCC | 26441671-TCT-CCC | *** | ||||||
28802537-GGC-TGG | 26656390-GGC-TGG | *** | ||||||
28802544-GAAC-TAAT | 26656397-GAAC-TAAT | *** | ||||||
9952814-G-T | 10115205-G-T | FT373446 | *** | |||||
22311188-T-C | 20149302-T-C | FT90099 | DYZ19 | *** | ||||
9944533-TGAAA-GGAAC | 10106924-TGAAA-GGAAC | *** | ||||||
9953788-AT-GC | 10116179-AT-GC | *** | ||||||
22488347-T-C | 20326461-T-C | DYZ19 | *** | |||||
58868568-A-T | 56722303-T-A | *** | ||||||
13129366-C-T | 10618852-C-T | *** | ||||||
58840466-C-T | 56750405-G-A | *** | ||||||
13484003-AACAC-TACAA | 11328327-AACAC-TACAA | *** | ||||||
9956872-C-G | 10119263-C-G | *** | ||||||
13482006-AGTTA-CGT | 11326330-AGTTA-CGT | *** | ||||||
9952770-T-C | 10115161-T-C | *** | ||||||
58991415-CCT-GCC | 56845268-CCT-GCC | *** | ||||||
58855014-C-T | 56735857-G-A | *** | ||||||
58868604-C-T | 56722267-G-A | *** | ||||||
13488842-TTG-GCC | 11333166-TTG-GCC | *** | ||||||
13110116-C-A | 10599602-C-A | *** | ||||||
58862015-A-C | 56728856-T-G | *** | ||||||
9931606-TGT-GGA | 10093997-TGT-GGA | *** | ||||||
58890307-A-G | 56700564-T-C | *** | ||||||
13469368-TG-CT | 11313692-TG-CT | *** | ||||||
9952849-A-G | 10115240-A-G | *** | ||||||
58845102-C-A | 56745769-G-T | *** | ||||||
10049749-C-CA | 10212140-C-CA | *** | ||||||
13339256-A-T | 11183580-A-T | *** | ||||||
9950584-T-C | 10112975-T-C | ZS1362 | *** | |||||
15320658-G-GGAA | 13208764-G-GGAA | *** | ||||||
10044567-C-T | 10206958-C-T | *** | ||||||
27997643-GA-G | 25851496-GA-G | P1_Y2 | 16×A | *** | ||||
13110088-C-G | 10599574-C-G | *** | ||||||
13440531-G-A | 11284855-G-A | *** | ||||||
22481538-G-A | 20319652-G-A | DYZ19 | *** | |||||
10017998-T-A | 10180389-T-A | *** | ||||||
10043318-T-G | 10205709-T-G | *** | ||||||
23900918-T-A | 21739032-T-A | *** | ||||||
9921530-G-T | 10083921-G-T | *** | ||||||
9944224-C-A | 10106615-C-A | *** | ||||||
10066308-G-T | 10228699-G-T | *** | ||||||
9944214-ACATC-GCATT | 10106605-ACATC-GCATT | *** | ||||||
9953463-ACTGCTTAG-TCTGGTTAT | 10115854-ACTGCTTAG-TCTGGTTAT | *** | ||||||
13109928-G-C | 10599414-G-C | *** | ||||||
13659237-G-A | 11503561-G-A | *** | ||||||
21940037-C-CAT | 19778151-C-CAT | 22×AT | *** | |||||
20424785-AAATG-A | 18262899-AAATG-A | P5_Dst | *** | |||||
9957933-C-G | 10120324-C-G | *** | ||||||
10064376-G-A | 10226767-G-A | *** | ||||||
13833050-AC-TG | 11712344-AC-TG | *** | ||||||
13859977-GTGTAATA-TCGTTATG | 11739271-GTGTAATA-TCGTTATG | *** | ||||||
10064272-ATGGTGTGAC-GTAGGCTGAA | 10226663-ATGGTGTGAC-GTAGGCTGAA | *** | ||||||
13833026-GGAC-TGAA | 11712320-GGAC-TGAA | *** | ||||||
13851603-TATTGAAT-AATGGAAG | 11730897-TATTGAAT-AATGGAAG | *** | ||||||
13859991-TATTGAATGGG-CATCGA | 11739285-TATTGAATGGG-CATCGA | *** | ||||||
22353496-A-T | 20191610-A-T | DYZ19 | *** | |||||
17597187-G-T | 15485307-G-T | *** | ||||||
4134484-C-A | 4266443-C-A | 18×A | *** | |||||
9925353-G-T | 10087744-G-T | *** | ||||||
9953093-A-C | 10115484-A-C | *** | ||||||
9953211-G-A | 10115602-G-A | *** | ||||||
9976896-G-A | 10139287-G-A | *** | ||||||
10014714-A-G | 10177105-A-G | *** | ||||||
10042527-C-G | 10204918-C-G | *** | ||||||
10042577-A-T | 10204968-A-T | *** | ||||||
10042736-T-G | 10205127-T-G | *** | ||||||
10043390-T-A | 10205781-T-A | *** | ||||||
10043530-C-T | 10205921-C-T | *** | ||||||
10044857-T-C | 10207248-T-C | *** | ||||||
10045142-A-C | 10207533-A-C | *** | ||||||
10050076-C-T | 10212467-C-T | *** | ||||||
10050110-G-C | 10212501-G-C | *** | ||||||
10050118-T-C | 10212509-T-C | Z8950 | *** | |||||
10050273-A-G | 10212664-A-G | *** | ||||||
10063478-G-A | 10225869-G-A | Z37795 | *** | |||||
10064371-A-G | 10226762-A-G | *** | ||||||
10064777-A-T | 10227168-A-T | *** | ||||||
10066320-A-G | 10228711-A-G | *** | ||||||
10067389-C-T | 10229780-C-T | *** | ||||||
10067406-A-T | 10229797-A-T | *** | ||||||
13223062-T-G | 11067386-T-G | FT441202 | *** | |||||
13407110-C-G | 11251434-C-G | *** | ||||||
13408789-A-G | 11253113-A-G | *** | ||||||
13423604-G-T | 11267928-G-T | *** | ||||||
21154966-C-G | 18993080-C-G | *** | ||||||
24386992-CTA-C | 22240845-CTA-C | *** | ||||||
13830390-T-G | 11709684-T-G | *** | ||||||
58851841-C-T | 56739030-G-A | *** | ||||||
10068846-T-C | 10231237-T-C | *** | ||||||
13869489-AT-CG | 11748783-AT-CG | *** | ||||||
13833226-TGACTG-CGATTTC | 11712520-TGACTG-CGATTTC | *** | ||||||
22229345-ATTT-GGTC | 20067459-ATTT-GGTC | DYZ19 | *** | |||||
10068829-CAGACAAGTAGTGT-TAGAAAAGCAGAG | 10231220-CAGACAAGTAGTGT-TAGAAAAGCAGAG | *** | ||||||
10068859-TAAAG-CAAAA | 10231250-TAAAG-CAAAA | *** | ||||||
13110124-G-C | 10599610-G-C | *** | ||||||
9953059-C-T | 10115450-C-T | *** | ||||||
10042924-C-T | 10205315-C-T | *** | ||||||
10044639-T-C | 10207030-T-C | *** | ||||||
10050262-C-G | 10212653-C-G | *** | ||||||
10050278-G-A | 10212669-G-A | *** | ||||||
10064432-T-C | 10226823-T-C | *** | ||||||
10064433-G-A | 10226824-G-A | *** | ||||||
10067174-A-C | 10229565-A-C | *** | ||||||
10067303-T-A | 10229694-T-A | F18099 | *** | |||||
10067312-C-T | 10229703-C-T | *** | ||||||
13440536-C-G | 11284860-C-G | *** | ||||||
13689723-C-CAGGAA | 11534047-C-CAGGAA | *** | ||||||
19436493-GCT-G | 17324613-GCT-G | *** | ||||||
22264965-A-G | 20103079-A-G | FGC38342 | DYZ19 | *** | ||||
22495626-T-G | 20333740-T-G | DYZ19 | *** | |||||
13446680-CATTCC-T | 11291004-CATTCC-T | *** | ||||||
13728961-GTCA-CTCG | 11573285-GTCA-CTCG | *** | ||||||
13867011-TCTGGAAT-ATTGAAC | 11746305-TCTGGAAT-ATTGAAC | *** | ||||||
13868769-CA-TG | 11748063-CA-TG | *** | ||||||
10070091-TCAC-ACAG | 10232482-TCAC-ACAG | *** | ||||||
13861579-GAT-CAG | 11740873-GAT-CAG | *** | ||||||
13861594-GAACA-AAACG | 11740888-GAACA-AAACG | *** | ||||||
13866949-GA-TG | 11746243-GA-TG | *** | ||||||
10042905-A-T | 10205296-A-T | *** | ||||||
22311556-A-C | 20149670-A-C | DYZ19 | *** | |||||
13707329-TG-AC | 11551653-TG-AC | *** | ||||||
13804794-CTCGTAT-ATCAAAG | 11684088-CTCGTAT-ATCAAAG | *** | ||||||
9921538-GATAGCAA-AAGAGAAC | 10083929-GATAGCAA-AAGAGAAC | *** | ||||||
13833059-CTGAA-ATCAT | 11712353-CTGAA-ATCAT | *** | ||||||
22503322-G-A | 20341436-G-A | DYZ19 | *** | |||||
13728363-C-A | 11572687-C-A | *** | ||||||
22481005-C-A | 20319119-C-A | DYZ19 | *** | |||||
9924556-G-A | 10086947-G-A | *** | ||||||
9915610-T-A | 10078001-T-A | *** | ||||||
9915617-T-A | 10078008-T-A | *** | ||||||
9915640-C-T | 10078031-C-T | *** | ||||||
9915625-TGGAG-GGGAT | 10078016-TGGAG-GGGAT | *** | ||||||
10067111-AATACAGT-GAGG | 10229502-AATACAGT-GAGG | *** | ||||||
10068919-C-G | 10231310-C-G | *** | ||||||
9957802-T-C | 10120193-T-C | FT373548 | *** | |||||
9956705-GA-CT | 10119096-GA-CT | *** | ||||||
13851695-ACAAATG-TCGAATT | 11730989-ACAAATG-TCGAATT | *** | ||||||
13857513-CC-AT | 11736807-CC-AT | *** | ||||||
10067405-AAGT-GTGC | 10229796-AAGT-GTGC | *** | ||||||
10067434-ACCA-GCCG | 10229825-ACCA-GCCG | *** | ||||||
13851710-TTGA-AGAT | 11731004-TTGA-AGAT | *** | ||||||
13446527-CTCCATTCCATTCCATTCCATTCCATTCCAT-C | 11290851-CTCCATTCCATTCCATTCCATTCCATTCCAT-C | 16×TCCAT | *** | |||||
22327544-C-T | 20165658-C-T | DYZ19 | *** | |||||
13837420-TC-CT | 11716714-TC-CT | *** | ||||||
13861967-T-A | 11741261-T-A | *** | ||||||
13728370-G-T | 11572694-G-T | *** | ||||||
10064169-T-A | 10226560-T-A | A13072 | *** | |||||
9946313-C-T | 10108704-C-T | *** | ||||||
9946318-G-T | 10108709-G-T | *** | ||||||
10031693-AGA-GGG | 10194084-AGA-GGG | *** | ||||||
13854317-CC-TG | 11733611-CC-TG | *** | ||||||
58899876-CTCC-TTCA | 56690992-GGAG-TGAA | *** | ||||||
27161947-T-A | 25015800-T-A | P1_g3 | *** | |||||
22328810-A-C | 20166924-A-C | DYZ19 | *** | |||||
22989187-T-G | 20827301-T-G | *** | ||||||
23486644-A-T | 21324758-A-T | A12586 | *** | |||||
28370013-TAT-GAG | 26223866-TAT-GAG | P1_gr2 | *** | |||||
13659351-TGAAT-GGAAA | 11503675-TGAAT-GGAAA | *** | ||||||
9950643-T-C | 10113034-T-C | *** | ||||||
9950671-T-C | 10113062-T-C | *** | ||||||
59031513-CC-GG | 56885366-CC-GG | *** | ||||||
22488380-GAGT-CAGG | 20326494-GAGT-CAGG | DYZ19 | *** | |||||
22365824-G-C | 20203938-G-C | DYZ19 | *** | |||||
10043362-C-T | 10205753-C-T | *** | ||||||
10043360-A-T | 10205751-A-T | *** | ||||||
10042333-A-G | 10204724-A-G | *** | ||||||
13110126-C-A | 10599612-C-A | *** | ||||||
10042862-C-T | 10205253-C-T | *** | ||||||
10042847-C-T | 10205238-C-T | *** | ||||||
10042352-T-A | 10204743-T-A | *** | ||||||
9920264-C-A | 10082655-C-A | Z4879 | *** | |||||
9916031-T-G | 10078422-T-G | *** | ||||||
10068929-A-G | 10231320-A-G | *** | ||||||
18414441-G-A | 16302561-G-A | BY211777 | P6_Gap | *** | ||||
10067444-A-G | 10229835-A-G | *** | ||||||
10067489-G-C | 10229880-G-C | *** | ||||||
10042630-T-C | 10205021-T-C | *** | ||||||
10067437-A-G | 10229828-A-G | *** | ||||||
10043540-A-G | 10205931-A-G | *** | ||||||
9916009-G-A | 10078400-G-A | *** | ||||||
10044751-T-C | 10207142-T-C | *** | ||||||
9919389-C-T | 10081780-C-T | FGC29133 | *** | |||||
22311668-G-A | 20149782-G-A | DYZ19 | *** | |||||
4763525-A-G | 4895484-A-G | *** | ||||||
22311666-G-A | 20149780-G-A | DYZ19 | *** | |||||
2685704-T-C | 2817663-T-C | *** | ||||||
2685713-A-G | 2817672-A-G | *** | ||||||
2810475-A-C | 2942434-A-C | *** | ||||||
2817774-T-C | 2949733-T-C | *** | ||||||
3809136-A-T | 3941095-A-T | 31×T | *** | |||||
3817132-A-G | 3949091-A-G | *** | ||||||
3909091-C-A | 4041050-C-A | *** | ||||||
3964608-T-G | 4096567-T-G | *** | ||||||
3964774-A-C | 4096733-A-C | *** | ||||||
4031743-C-T | 4163702-C-T | *** | ||||||
4058594-T-A | 4190553-T-A | *** | ||||||
4077515-T-C | 4209474-T-C | *** | ||||||
4275251-T-C | 4407210-T-C | *** | ||||||
4319135-G-C | 4451094-G-C | *** | ||||||
4354381-A-C | 4486340-A-C | *** | ||||||
5044408-C-G | 5176367-C-G | *** | ||||||
5089292-G-T | 5221251-G-T | *** | ||||||
5351295-T-A | 5483254-T-A | *** | ||||||
5436881-T-C | 5568840-T-C | *** | ||||||
5436893-A-C | 5568852-A-C | *** | ||||||
5476442-A-G | 5608401-A-G | *** | ||||||
5476466-A-G | 5608425-A-G | *** | ||||||
5476471-C-G | 5608430-C-G | *** | ||||||
5477175-C-T | 5609134-C-T | *** | ||||||
5477917-A-G | 5609876-A-G | *** | ||||||
5479547-C-A | 5611506-C-A | *** | ||||||
5479570-G-A | 5611529-G-A | *** | ||||||
5794915-C-G | 5926874-C-G | *** | ||||||
6173304-T-C | 6305263-T-C | IR3_Dst | *** | |||||
6183171-G-C | 6315130-G-C | IR3_Dst | *** | |||||
6216152-T-A | 6348111-T-A | IR3_Dst | *** | |||||
6295665-A-C | 6427624-A-C | IR3_Dst | *** | |||||
6295666-C-A | 6427625-C-A | IR3_Dst | *** | |||||
6295755-A-C | 6427714-A-C | IR3_Dst | *** | |||||
6508710-T-G | 6640669-T-G | *** | ||||||
7173790-A-G | 7305749-A-G | *** | ||||||
7317589-A-C | 7449548-A-C | *** | ||||||
7317594-T-C | 7449553-T-C | *** | ||||||
7504444-T-C | 7636403-T-C | IR1_L | *** | |||||
7793001-A-C | 7924960-A-C | *** | ||||||
8407444-A-G | 8539403-A-G | *** | ||||||
8723707-T-C | 8855666-T-C | *** | ||||||
9300270-C-A | 9462661-C-A | *** | ||||||
9668510-A-C | 9830901-A-C | IR3_Prx | *** | |||||
9740260-T-G | 9902651-T-G | IR3_Prx | *** | |||||
9782972-A-C | 9945363-A-C | *** | ||||||
9909005-G-A | 10071396-G-A | *** | ||||||
9919397-A-T | 10081788-A-T | *** | ||||||
9920461-T-G | 10082852-T-G | *** | ||||||
9974049-C-T | 10136440-C-T | *** | ||||||
10032960-A-G | 10195351-A-G | *** | ||||||
10044358-G-A | 10206749-G-A | *** | ||||||
10066300-G-T | 10228691-G-T | *** | ||||||
10067207-A-T | 10229598-A-T | *** | ||||||
10067227-T-G | 10229618-T-G | *** | ||||||
10067273-A-G | 10229664-A-G | *** | ||||||
10095071-T-A | 10257462-T-A | *** | ||||||
10095106-A-G | 10257497-A-G | *** | ||||||
13113429-T-C | 10602915-T-C | *** | ||||||
13113493-T-C | 10602979-T-C | *** | ||||||
13129382-T-A | 10618868-T-A | *** | ||||||
13132048-G-A | 10621534-G-A | *** | ||||||
13222093-A-G | 11066417-A-G | *** | ||||||
13222626-G-C | 11066950-G-C | *** | ||||||
13223282-A-G | 11067606-A-G | *** | ||||||
13223469-G-A | 11067793-G-A | *** | ||||||
13454903-A-G | 11299227-A-G | *** | ||||||
13699328-T-A | 11543652-T-A | *** | ||||||
13728325-G-T | 11572649-G-T | *** | ||||||
13728326-A-C | 11572650-A-C | *** | ||||||
13728381-A-G | 11572705-A-G | *** | ||||||
13731686-T-A | 11576010-T-A | *** | ||||||
13813678-A-G | 11692972-A-G | *** | ||||||
13843854-C-A | 11723148-C-A | *** | ||||||
13879838-A-G | 11759132-A-G | *** | ||||||
14630479-T-C | 12518548-T-C | *** | ||||||
14704048-A-G | 12592114-A-G | *** | ||||||
14986466-C-T | 12874534-C-T | FT216 | *** | |||||
14986481-A-G | 12874549-A-G | *** | ||||||
15641474-A-T | 13529594-A-T | *** | ||||||
15882103-T-C | 13770223-T-C | *** | ||||||
16228018-A-T | 14116138-A-T | *** | ||||||
16785920-T-G | 14674040-T-G | *** | ||||||
16786550-G-T | 14674670-G-T | *** | ||||||
16792142-G-T | 14680262-G-T | *** | ||||||
16947545-T-G | 14835665-T-G | *** | ||||||
17323764-A-G | 15211884-A-G | *** | ||||||
17323774-G-A | 15211894-G-A | *** | ||||||
17432075-G-T | 15320195-G-T | *** | ||||||
17432076-A-T | 15320196-A-T | *** | ||||||
17432081-A-T | 15320201-A-T | *** | ||||||
17543748-T-G | 15431868-T-G | *** | ||||||
17543782-C-G | 15431902-C-G | *** | ||||||
17950835-T-A | 15838955-T-A | *** | ||||||
17988226-T-A | 15876346-T-A | P7_Prx | *** | |||||
18123741-T-G | 16011861-T-G | *** | ||||||
18317719-C-A | 16205839-C-A | P6_Prx | *** | |||||
18328834-T-A | 16216954-T-A | P6_Prx | *** | |||||
18408478-C-T | 16296598-C-T | P6_Gap | *** | |||||
18455174-G-A | 16343294-G-A | P6_Dst | *** | |||||
18465453-G-A | 16353573-G-A | P6_Dst | *** | |||||
19302921-T-A | 17191041-T-A | Y104328 | *** | |||||
19386550-T-G | 17274670-T-G | *** | ||||||
19386989-T-A | 17275109-T-A | *** | ||||||
19746235-A-C | 17634355-A-C | P5_Prx | *** | |||||
19756426-A-G | 17644546-A-G | P5_Prx | *** | |||||
19803577-T-C | 17691697-T-C | P5_Prx | *** | |||||
19845834-A-C | 17733954-A-C | P5_Prx | *** | |||||
20243005-A-G | 18081119-A-G | P5_Dst | *** | |||||
20363033-A-T | 18201147-A-T | P5_Dst | *** | |||||
20420954-G-A | 18259068-G-A | P5_Dst | *** | |||||
20425802-T-C | 18263916-T-C | P5_Dst | *** | |||||
20438905-A-C | 18277019-A-C | P5_Dst | *** | |||||
20454948-G-T | 18293062-G-T | P5_Dst | *** | |||||
20510927-G-T | 18349041-G-T | P5_Dst | *** | |||||
20631600-C-A | 18469714-C-A | P4_Prx | *** | |||||
20658781-A-C | 18496895-A-C | P4_Prx | *** | |||||
20658998-A-T | 18497112-A-T | P4_Prx | *** | |||||
20676071-T-G | 18514185-T-G | P4_Prx | *** | |||||
20748907-G-T | 18587021-G-T | P4_Prx | *** | |||||
20778903-T-C | 18617017-T-C | P4_Prx | *** | |||||
20861166-A-G | 18699280-A-G | P4_Dst | *** | |||||
20908422-A-C | 18746536-A-C | P4_Dst | *** | |||||
20947235-A-C | 18785349-A-C | P4_Dst | *** | |||||
22032192-T-C | 19870306-T-C | *** | ||||||
22113217-A-G | 19951331-A-G | *** | ||||||
22234824-T-G | 20072938-T-G | DYZ19 | *** | |||||
22237326-G-A | 20075440-G-A | DYZ19 | *** | |||||
22240918-G-T | 20079032-G-T | DYZ19 | *** | |||||
22244548-T-A | 20082662-T-A | DYZ19 | *** | |||||
22245422-G-A | 20083536-G-A | DYZ19 | *** | |||||
22248364-G-T | 20086478-G-T | DYZ19 | *** | |||||
22264936-A-T | 20103050-A-T | DYZ19 | *** | |||||
22264947-C-A | 20103061-C-A | DYZ19 | *** | |||||
22264973-T-C | 20103087-T-C | DYZ19 | *** | |||||
22307013-A-T | 20145127-A-T | DYZ19 | *** | |||||
22311207-T-C | 20149321-T-C | DYZ19 | *** | |||||
22311688-G-C | 20149802-G-C | DYZ19 | *** | |||||
22311695-A-G | 20149809-A-G | DYZ19 | *** | |||||
22326434-T-G | 20164548-T-G | DYZ19 | *** | |||||
22328791-A-G | 20166905-A-G | DYZ19 | *** | |||||
22342224-T-G | 20180338-T-G | DYZ19 | *** | |||||
22346721-C-A | 20184835-C-A | DYZ19 | *** | |||||
22361408-G-T | 20199522-G-T | DYZ19 | *** | |||||
22364526-G-A | 20202640-G-A | DYZ19 | *** | |||||
22364599-G-T | 20202713-G-T | DYZ19 | *** | |||||
22365905-A-T | 20204019-A-T | DYZ19 | *** | |||||
22365908-G-C | 20204022-G-C | DYZ19 | *** | |||||
22365965-C-G | 20204079-C-G | DYZ19 | *** | |||||
22433170-T-G | 20271284-T-G | DYZ19 | *** | |||||
22481069-C-G | 20319183-C-G | DYZ19 | *** | |||||
22503008-C-A | 20341122-C-A | DYZ19 | *** | |||||
22504276-C-A | 20342390-C-A | DYZ19 | *** | |||||
22511854-T-A | 20349968-T-A | DYZ19 | *** | |||||
22511856-T-G | 20349970-T-G | DYZ19 | *** | |||||
22636615-C-T | 20474729-C-T | FTB18218 | *** | |||||
22920007-A-G | 20758121-A-G | *** | ||||||
23223392-T-G | 21061506-T-G | *** | ||||||
23475764-A-G | 21313878-A-G | *** | ||||||
24149923-A-G | 22003776-A-G | P3_b1 | *** | |||||
24183791-A-C | 22037644-A-C | P3_b1 | *** | |||||
24232068-T-G | 22085921-T-G | P3_b1 | *** | |||||
24253802-A-G | 22107655-A-G | P3_b1 | *** | |||||
24390087-T-G | 22243940-T-G | *** | ||||||
24659288-C-G | 22513141-C-G | P3_b2 | *** | |||||
24869063-A-C | 22722916-A-C | IR1_R | *** | |||||
24912644-C-A | 22766497-C-A | g1 | *** | |||||
24940831-T-G | 22794684-T-G | g1 | *** | |||||
24965898-G-A | 22819751-G-A | g1 | *** | |||||
25138051-T-G | 22991904-T-G | g1 | *** | |||||
25256073-A-C | 23109926-A-C | P2_r1 | *** | |||||
25256074-A-C | 23109927-A-C | P2_r1 | *** | |||||
25351591-G-T | 23205444-G-T | P2_r1 | *** | |||||
25379042-A-G | 23232895-A-G | P2_r2 | *** | |||||
25379051-A-G | 23232904-A-G | P2_r2 | *** | |||||
25461517-A-T | 23315370-A-T | P2_r2 | *** | |||||
25571585-T-C | 23425438-T-C | P1_gr1 | *** | |||||
25800336-G-A | 23654189-G-A | P1_b3 | *** | |||||
25845001-T-C | 23698854-T-C | P1_b3 | *** | |||||
25845022-A-C | 23698875-A-C | P1_b3 | *** | |||||
25845026-A-C | 23698879-A-C | P1_b3 | *** | |||||
25929016-T-G | 23782869-T-G | P1_Y1 | *** | |||||
26042850-G-A | 23896703-G-A | P1_Y1 | *** | |||||
26089744-A-G | 23943597-A-G | P1_Y1 | *** | |||||
26089785-T-G | 23943638-T-G | P1_Y1 | *** | |||||
26120240-A-C | 23974093-A-C | P1_Y1 | 4×CTTC | *** | ||||
26140511-G-T | 23994364-G-T | P1_Y1 | *** | |||||
26153630-T-G | 24007483-T-G | P1_Y1 | *** | |||||
26201316-C-A | 24055169-C-A | P1_Y1 | *** | |||||
26242280-C-T | 24096133-C-T | P1_Y1 | *** | |||||
26242910-A-C | 24096763-A-C | P1_Y1 | *** | |||||
26270412-A-C | 24124265-A-C | P1_Y1 | *** | |||||
26344604-T-C | 24198457-T-C | P1_Y1 | *** | |||||
26352450-A-T | 24206303-A-T | P1_Y1 | *** | |||||
26421956-A-C | 24275809-A-C | P1_Y1 | *** | |||||
26421968-A-G | 24275821-A-G | P1_Y1 | *** | |||||
26421992-A-G | 24275845-A-G | P1_Y1 | *** | |||||
26495392-G-C | 24349245-G-C | P1_Y1 | *** | |||||
26508299-T-G | 24362152-T-G | P1_Y1 | *** | |||||
26636028-A-G | 24489881-A-G | P1_g2 | *** | |||||
26677128-A-T | 24530981-A-T | P1_g2 | *** | |||||
26684867-T-C | 24538720-T-C | P1_g2 | *** | |||||
26684897-T-G | 24538750-T-G | P1_g2 | *** | |||||
26834373-A-T | 24688226-A-T | P1_g2 | *** | |||||
26992751-C-G | 24846604-C-G | P1_r4 | *** | |||||
27000785-A-C | 24854638-A-C | P1_r4 | *** | |||||
27127803-G-T | 24981656-G-T | P1_g3 | *** | |||||
27266610-G-T | 25120463-G-T | P1_g3 | *** | |||||
27266862-G-A | 25120715-G-A | P1_g3 | *** | |||||
27432931-C-A | 25286784-C-A | P1_g3 | *** | |||||
27445532-C-A | 25299385-C-A | P1_Y2 | *** | |||||
27618070-C-A | 25471923-C-A | P1_Y2 | *** | |||||
27636173-A-C | 25490026-A-C | P1_Y2 | *** | |||||
27667516-G-C | 25521369-G-C | P1_Y2 | *** | |||||
27692261-A-C | 25546114-A-C | P1_Y2 | *** | |||||
27821867-T-G | 25675720-T-G | P1_Y2 | *** | |||||
27829317-C-A | 25683170-C-A | P1_Y2 | *** | |||||
27873356-A-C | 25727209-A-C | P1_Y2 | *** | |||||
27981993-C-G | 25835846-C-G | P1_Y2 | *** | |||||
27981996-G-C | 25835849-G-C | P1_Y2 | *** | |||||
28018177-T-G | 25872030-T-G | P1_Y2 | *** | |||||
28019752-T-A | 25873605-T-A | P1_Y2 | *** | |||||
28062620-T-G | 25916473-T-G | P1_Y2 | *** | |||||
28062642-A-C | 25916495-A-C | P1_Y2 | *** | |||||
28090189-G-T | 25944042-G-T | P1_Y2 | *** | |||||
28090222-A-C | 25944075-A-C | P1_Y2 | *** | |||||
28191682-T-G | 26045535-T-G | P1_b4 | *** | |||||
28209455-C-T | 26063308-C-T | P1_b4 | *** | |||||
28234792-T-A | 26088645-T-A | P1_b4 | *** | |||||
28457337-A-C | 26311190-A-C | *** | ||||||
28556061-C-A | 26409914-C-A | *** | ||||||
28814668-T-G | 26668521-T-G | *** | ||||||
58828601-T-G | 56762270-A-C | *** | ||||||
58831343-T-C | 56759528-A-G | *** | ||||||
58838065-T-G | 56752806-A-C | *** | ||||||
58839073-G-C | 56751798-C-G | *** | ||||||
58839102-A-G | 56751769-T-C | *** | ||||||
58839107-C-A | 56751764-G-T | *** | ||||||
58843871-A-T | 56747000-T-A | *** | ||||||
58844135-C-T | 56746736-G-A | *** | ||||||
58853372-C-G | 56737499-G-C | *** | ||||||
58865545-T-G | 56725326-A-C | *** | ||||||
58878715-A-T | 56712156-T-A | *** | ||||||
58890276-C-T | 56700595-G-A | *** | ||||||
58896108-C-G | 56694763-G-C | *** | ||||||
58900128-T-C | 56690743-A-G | *** | ||||||
58900138-A-C | 56690733-T-G | *** | ||||||
58907271-A-C | 56683600-T-G | *** | ||||||
13839244-AAG-TAA | 11718538-AAG-TAA | *** | ||||||
13859590-GAACAGATTCGAAT-AAACGGACTCAATA | 11738884-GAACAGATTCGAAT-AAACGGACTCAATA | *** | ||||||
13824822-AG-TT | 11704116-AG-TT | *** | ||||||
13824829-GAA-TAT | 11704123-GAA-TAT | *** | ||||||
13824841-ATGGAAT-GTAGAAC | 11704135-ATGGAAT-GTAGAAC | *** | ||||||
13110124-GTC-CTA | 10599610-GTC-CTA | *** | ||||||
14467026-TCTATCTAT-C | 12346295-TCTATCTAT-C | *** | ||||||
10015565-AT-GC | 10177956-AT-GC | *** | ||||||
13833096-GGC-TGA | 11712390-GGC-TGA | *** | ||||||
3436403-TCGCCCT-CCACCCG | 3568362-TCGCCCT-CCACCCG | *** | ||||||
10056466-CG-GT | 10218857-CG-GT | *** | ||||||
10033570-TG-GC | 10195961-TG-GC | *** | ||||||
13851586-AGAATAG-GATATCA | 11730880-AGAATAG-GATATCA | *** | ||||||
28797853-GAGA-TGGT | 26651706-GAGA-TGGT | *** | ||||||
10043546-ATA-TTG | 10205937-ATA-TTG | *** | ||||||
13867929-CAGAACTGACT-TGGAATGGACA | 11747223-CAGAACTGACT-TGGAATGGACA | *** | ||||||
10042367-AA-TG | 10204758-AA-TG | *** | ||||||
13682926-GA-TC | 11527250-GA-TC | *** | ||||||
13659211-GGGATC-AGAGTT | 11503535-GGGATC-AGAGTT | *** | ||||||
2688585-C-CAT | 2820544-C-CAT | 19×AT | *** | |||||
3641042-C-CTTTCT | 3773001-C-CTTTCT | *** | ||||||
4000403-A-ATT | 4132362-A-ATT | 14×T | *** | |||||
4928799-CA-TG | 5060758-CA-TG | *** | ||||||
5797468-T-TATAG | 5929427-T-TATAG | *** | ||||||
6597340-T-TAAA | 6729299-T-TAAA | 28×A | *** | |||||
7536337-C-CA | 7668296-C-CA | 28×A | *** | |||||
8995633-A-AT | 9158024-A-AT | 10×T | *** | |||||
9915665-ACTATA-TATATC | 10078056-ACTATA-TATATC | *** | ||||||
9919304-AGA-TG | 10081695-AGA-TG | *** | ||||||
9920473-GC-TT | 10082864-GC-TT | *** | ||||||
9924454-GT-AA | 10086845-GT-AA | *** | ||||||
9953564-CAAAA-TAAAC | 10115955-CAAAA-TAAAC | *** | ||||||
9953614-CT-TA | 10116005-CT-TA | *** | ||||||
9965278-AGCAC-GGCAT | 10127669-AGCAC-GGCAT | *** | ||||||
9997664-GTAG-ATAA | 10160055-GTAG-ATAA | *** | ||||||
9997686-CTTAT-TTTA | 10160077-CTTAT-TTTA | *** | ||||||
10015546-CAGCT-GAGCC | 10177937-CAGCT-GAGCC | *** | ||||||
10015832-TTCC-CTCT | 10178223-TTCC-CTCT | *** | ||||||
10017801-CCTTC-TCTTA | 10180192-CCTTC-TCTTA | *** | ||||||
10018005-GAGTT-CAGTG | 10180396-GAGTT-CAGTG | *** | ||||||
10044843-TTTG-CTTT | 10207234-TTTG-CTTT | *** | ||||||
10050227-GAAGT-AAAGG | 10212618-GAAGT-AAAGG | *** | ||||||
10062354-CTAA-TTAT | 10224745-CTAA-TTAT | *** | ||||||
10063457-AG-A | 10225848-AG-A | *** | ||||||
10063611-TG-CA | 10226002-TG-CA | *** | ||||||
10063622-GA-AG | 10226013-GA-AG | *** | ||||||
10063921-CAGGT-TAGGC | 10226312-CAGGT-TAGGC | *** | ||||||
10064432-TG-CA | 10226823-TG-CA | *** | ||||||
10064735-TCGGG-T | 10227126-TCGGG-T | *** | ||||||
10064743-GTATG-TTATT | 10227134-GTATG-TTATT | *** | ||||||
10067287-CTTGT-ATTGC | 10229678-CTTGT-ATTGC | *** | ||||||
10067308-GTGTC-CTGTT | 10229699-GTGTC-CTGTT | *** | ||||||
10067468-TCACA-CTACAT | 10229859-TCACA-CTACAT | *** | ||||||
10069947-TC-AT | 10232338-TC-AT | *** | ||||||
10069969-AT-GC | 10232360-AT-GC | *** | ||||||
10069976-CT-AA | 10232367-CT-AA | *** | ||||||
10095049-TA-CT | 10257440-TA-CT | *** | ||||||
13110088-CACTTTA-GAGTTTC | 10599574-CACTTTA-GAGTTTC | *** | ||||||
13120485-CT-TC | 10609971-CT-TC | *** | ||||||
13129382-TAG-AAT | 10618868-TAG-AAT | *** | ||||||
13132068-AC-CA | 10621554-AC-CA | *** | ||||||
13137115-TC-CT | 10626601-TC-CT | *** | ||||||
13137780-TGCCTTGCC-AGCATTCCA | 10627266-TGCCTTGCC-AGCATTCCA | *** | ||||||
13138130-TCG-CCA | 10627616-TCG-CCA | *** | ||||||
13447638-CCTGCGAGCTCCAC-TCCGTGAACTGCAT | 11291962-CCTGCGAGCTCCAC-TCCGTGAACTGCAT | *** | ||||||
13449630-AAAA-GAC | 11293954-AAAA-GAC | *** | ||||||
13457953-CTCCACTCCACTCCAC-TTCCATTCCAT | 11302277-CTCCACTCCACTCCAC-TTCCATTCCAT | *** | ||||||
13461266-AGTAGG-TGTGGT | 11305590-AGTAGG-TGTGGT | *** | ||||||
13478889-ATGT-CTGG | 11323213-ATGT-CTGG | *** | ||||||
13648143-A-ATGCAG | 11492467-A-ATGCAG | *** | ||||||
13648149-TCG-ACA | 11492473-TCG-ACA | *** | ||||||
13658772-AAGTGTAATG-GATTGGAATA | 11503096-AAGTGTAATG-GATTGGAATA | *** | ||||||
13658787-AAT-TAA | 11503111-AAT-TAA | *** | ||||||
13658867-AAATGGAATT-GAATCAATG | 11503191-AAATGGAATT-GAATCAATG | *** | ||||||
13658896-AGAA-GGAC | 11503220-AGAA-GGAC | *** | ||||||
13659185-ACAAT-TCGAA | 11503509-ACAAT-TCGAA | *** | ||||||
13659279-ATGTAATA-GTGAAATG | 11503603-ATGTAATA-GTGAAATG | *** | ||||||
13659372-AC-GA | 11503696-AC-GA | *** | ||||||
13659397-GAAAG-AAATA | 11503721-GAAAG-AAATA | *** | ||||||
13701537-GGG-TGC | 11545861-GGG-TGC | *** | ||||||
13707692-TGC-GGA | 11552016-TGC-GGA | *** | ||||||
13711070-GGAAT-ATAATG | 11555394-GGAAT-ATAATG | *** | ||||||
13729081-CAG-GAA | 11573405-CAG-GAA | *** | ||||||
13804489-GATTG-AAATA | 11683783-GATTG-AAATA | *** | ||||||
13804498-TGAG-GGAA | 11683792-TGAG-GGAA | *** | ||||||
13810291-TTCAAATTGAAA-ATCATATAGAAT | 11689585-TTCAAATTGAAA-ATCATATAGAAT | *** | ||||||
13824883-GGAAT-CGAAA | 11704177-GGAAT-CGAAA | *** | ||||||
13825037-AC-GA | 11704331-AC-GA | *** | ||||||
13832998-CATCGAATT-AATGGAAGG | 11712292-CATCGAATT-AATGGAAGG | *** | ||||||
13833616-AGACTGGAAA-GGATTGAAC | 11712910-AGACTGGAAA-GGATTGAAC | *** | ||||||
13837370-TGA-GGG | 11716664-TGA-GGG | *** | ||||||
13838787-C-GTTGGAGTAGAATGGA | 11718081-C-GTTGGAGTAGAATGGA | *** | ||||||
13838794-CGGAAATG-TGGAGATT | 11718088-CGGAAATG-TGGAGATT | *** | ||||||
13839285-TCAATC-CGAAAT | 11718579-TCAATC-CGAAAT | *** | ||||||
13839357-GAT-AAA | 11718651-GAT-AAA | *** | ||||||
13846297-TTAA-CTCT | 11725591-TTAA-CTCT | *** | ||||||
13851002-TACCT-GACCA | 11730296-TACCT-GACCA | *** | ||||||
13851257-CAATA-AAATG | 11730551-CAATA-AAATG | *** | ||||||
13851277-TAATCA-GAAATG | 11730571-TAATCA-GAAATG | *** | ||||||
13851329-ATGT-GTGG | 11730623-ATGT-GTGG | *** | ||||||
13854285-ATA-CTC | 11733579-ATA-CTC | *** | ||||||
13856996-AGACC-GGACT | 11736290-AGACC-GGACT | *** | ||||||
13859684-TGAATG-AGAGTT | 11738978-TGAATG-AGAGTT | *** | ||||||
13859706-GATGG-AATGA | 11739000-GATGG-AATGA | *** | ||||||
13860094-TGAATGC-CGAGTGG | 11739388-TGAATGC-CGAGTGG | *** | ||||||
13860363-TAGAT-CGGAA | 11739657-TAGAT-CGGAA | *** | ||||||
13861604-GAAT-AATA | 11740898-GAAT-AATA | *** | ||||||
13862168-ACTT-GTAG | 11741462-ACTT-GTAG | *** | ||||||
13863145-TATT-CATC | 11742439-TATT-CATC | *** | ||||||
13864518-CTCGCATGG-GTGGAATAT | 11743812-CTCGCATGG-GTGGAATAT | *** | ||||||
13864542-TATGTCATT-AACGGCAAC | 11743836-TATGTCATT-AACGGCAAC | *** | ||||||
13867328-AACTCGAAT-GATTGAAC | 11746622-AACTCGAAT-GATTGAAC | *** | ||||||
13867351-TGGG-AGGA | 11746645-TGGG-AGGA | *** | ||||||
13867380-ATT-GTG | 11746674-ATT-GTG | *** | ||||||
13867969-TCT-ACG | 11747263-TCT-ACG | *** | ||||||
13867984-ACT-GCG | 11747278-ACT-GCG | *** | ||||||
13868581-GAATGA-ATATCG | 11747875-GAATGA-ATATCG | *** | ||||||
13868930-TG-CC | 11748224-TG-CC | *** | ||||||
13936215-A-AGAAT | 11815509-A-AGAAT | *** | ||||||
14429405-T-TCA | 12308680-T-TCATA | 15×TA | *** | |||||
14533029-GC-AA | 12421230-GC-AA | *** | ||||||
14613459-CT-C | 12501657-CT-C | 26×T | *** | |||||
14784689-TATTC-T | 12672759-TATTC-T | *** | ||||||
18124292-TGAAT-GGAAG | 16012412-TGAAT-GGAAG | *** | ||||||
18872221-CTTA-TTTC | 16760341-CTTA-TTTC | *** | ||||||
19302920-CT-GCA | 17191040-CT-GCA | *** | ||||||
19387112-G-GTCATAAATT | 17275232-G-GTCATAAATT | *** | ||||||
22248364-GTA-TTC | 20086478-GTA-TTC | DYZ19 | *** | |||||
22264961-ATCAA-TTCAG | 20103075-ATCAA-TTCAG | DYZ19 | *** | |||||
22503044-CTTAC-ATTAG | 20341158-CTTAC-ATTAG | DYZ19 | *** | |||||
22504860-CAGT-TAGG | 20342974-CAGT-TAGG | DYZ19 | *** | |||||
22511854-TTT-ATG | 20349968-TTT-ATG | DYZ19 | *** | |||||
23325306-TCCCACCCG-CCCCCCCCC | 21163420-TCCCACCCG-CCCCCCCCC | *** | ||||||
23486651-TAGAG-AAGAT | 21324765-TAGAG-AAGAT | *** | ||||||
25593509-CT-C | 23447362-CT-C | P1_gr1 | 18×T | *** | ||||
27462488-T-TAC | 25316341-T-TAC | P1_Y2 | 15×AC | *** | ||||
28786889-TGTT-AGTG | 26640742-TGTT-AGTG | *** | ||||||
28815103-GTAGC-CTAGT | 26668956-GTAGC-CTAGT | *** | ||||||
58907275-ATT-TTC | 56683594-AAT-GAA | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.