Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > Z295/S1217

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC-BigY
26BS5
19302915-GCT-G 17191035-GCT-G +
4482104-C-T 4614063-C-T FGC46896 +
22155061-G-A 19993175-G-A FGC46936 Y+
15025048-G-T 12913136-G-T FGC46915 YY+
14460197-C-T 12339470-C-T FGC46914 YY+
23814376-A-G 21652490-A-G FGC46941 Y+
24424156-T-G 22278009-T-G FGC46942 Y+
22979493-T-C 20817607-T-C FGC46939 YY+
16410857-C-A 14298977-C-A FGC46922 Y+
16513917-T-C 14402037-T-C FGC46923 YY+
4344966-C-G 4476925-C-G FGC46894 +
16308643-G-T 14196763-G-T FGC46919 YY+
4471861-C-A 4603820-C-A FGC46895 +
21072261-C-A 18910375-C-A FGC46932 YY+
17249273-C-T 15137393-C-T FGC46926 Y+
9864728-T-G 10027119-T-G FGC46909 YY+
17266783-G-T 15154903-G-T FGC46927 Y+
9818717-C-T 9981108-C-T FGC46908 YY+
9022267-C-T 9184658-C-T FGC46907 Y+
8908321-C-T 9040280-C-T FGC46906 +
8613014-C-G 8744973-C-G FGC46905 YY+
16234318-G-A 14122438-G-A FGC46918 YY+
7869717-C-T 8001676-C-T FGC46904 Z43260 YY*
16684063-C-T 14572183-C-T FGC46924 Y*
16348357-G-A 14236477-G-A FGC46921 YY*
17425056-C-T 15313176-C-T FGC46928 YY*
17854632-G-A 15742752-G-A FGC46929 Y*
18797228-A-G 16685348-A-G FGC46930 Y*
16314868-C-T 14202988-C-T FGC46920 YY*
5710249-C-A 5842208-C-A FGC46899 *
15350964-C-A 13239083-C-A FGC46917 YY*
15113163-G-A 13001250-G-A FGC46916 YY*
14320485-C-T 12199779-C-T FGC46913 YY*
14063137-C-A 11942431-C-A FGC46912 YY*
13848721-T-C 11728015-T-C FGC46911 *
3011982-T-A 3143941-T-A FGC46892 *
13345697-G-C 11190021-G-C FGC46910 *
4256852-C-G 4388811-C-G FGC46893 *
4767966-G-A 4899925-G-A FGC46897 *
4790970-T-C 4922929-T-C FGC46898 *
5822672-A-T 5954631-A-T FGC46900 *
6628564-C-T 6760523-C-T FGC46901 YY*
6826777-T-G 6958736-T-G FGC46902 YY*
7211204-G-T 7343163-G-T FGC46903 YY*
7178299-G-C 7310258-G-C Z13028 YY*
16897314-T-C 14785434-T-C FGC46925 YY*
20950774-C-T 18788888-C-T FGC46931 P4_Dst *
22767743-CT-C 20605857-CT-C *
21585666-C-T 19423780-C-T FGC46933 Y*
21797677-T-C 19635791-T-C FGC46934 YY*
21972941-C-G 19811055-C-G FGC46935 YY*
23586096-G-T 21424210-G-T FGC46940 YY*
22526610-C-A 20364724-C-A FGC46937 Y*
22923962-G-C 20762076-G-C FGC46938 YY*
5235847-TACAC-T 5367806-TACAC-T 11×AC**
18612142-TCTGTTTCTGAGA-T 16500262-TCTGTTTCTGAGA-T **
21547449-T-C 19385563-T-C **
20084485-C-T 17972605-C-T P5_Dst **
22433051-A-G 20271165-A-G DYZ19 **
22478958-G-C 20317072-G-C BY53225 DYZ19 **
22021414-A-C 19859528-A-C **
23812375-C-G 21650489-C-G **
3436380-T-C 3568339-T-C L327 **
14784680-CATTCTTCTT-C 12672750-CATTCTTCTT-C **
17016177-GTAAA-G 14904297-GTAAA-G **
14998620-A-C 12886705-A-C **
14673895-G-A 12561961-G-A **
14673894-T-A 12561960-T-A **
14533030-C-A 12421231-C-A Y91650 **
23077104-G-T 20915218-G-T **
4976584-C-T 5108543-C-T Y82040 **
6410949-AAAAT-A 6542908-AAAAT-A 10×AAAT**
13964452-C-A 11843746-C-A Y89927 **
14533029-G-A 12421230-G-A Y91649 **
23865203-T-C 21703317-T-C **
8901423-ATGTATATATAATG-A 9033382-ATGTATATATAATG-A **
2817759-T-G 2949718-T-G **
7474374-A-AAGAG 7606333-A-AAGAG IR1_L 21×AG**
20931853-A-ATGTG 18769967-A-ATGTG P4_Dst 18×TG**
13717054-C-T 11561378-C-T BY54446 **
13693307-A-T 11537631-A-T **
24387347-C-CAT 22241200-C-CAT **
5795879-C-T 5927838-C-T **
4786521-A-G 4918480-A-G Y82017 **
8394207-A-G 8526166-A-G **
4976541-T-C 5108500-T-C F9199 FGC18529 **
24007258-A-G 21861111-A-G **
13270288-A-ATTTTT 11114612-A-ATTTTT 10×T**
19034739-G-T 16922859-G-T **
13544730-T-C 11389054-T-C **
26212735-C-T 24066588-C-T P1_Y1 **
18123741-T-A 16011861-T-A **
6020697-T-G 6152656-T-G Z3156 **
26352450-A-T 24206303-A-T P1_Y1 ***
22504276-C-A 20342390-C-A DYZ19 ***
28062642-A-C 25916495-A-C P1_Y2 ***
28062620-T-G 25916473-T-G P1_Y2 ***
28019752-T-A 25873605-T-A P1_Y2 ***
28018177-T-G 25872030-T-G P1_Y2 ***
27981996-G-C 25835849-G-C P1_Y2 ***
24232068-T-G 22085921-T-G P3_b1 ***
22511854-T-A 20349968-T-A DYZ19 ***
25256073-A-C 23109926-A-C P2_r1 ***
25256074-A-C 23109927-A-C P2_r1 ***
22511856-T-G 20349970-T-G DYZ19 ***
27981993-C-G 25835846-C-G P1_Y2 ***
25351591-G-T 23205444-G-T P2_r1 ***
27873356-A-C 25727209-A-C P1_Y2 ***
27829317-C-A 25683170-C-A P1_Y2 ***
22636615-C-T 20474729-C-T ***
27821867-T-G 25675720-T-G P1_Y2 ***
28090189-G-T 25944042-G-T P1_Y2 ***
28191682-T-G 26045535-T-G P1_b4 ***
28090222-A-C 25944075-A-C P1_Y2 ***
58831343-T-C 56759528-A-G ***
58839102-A-G 56751769-T-C ***
24659288-C-G 22513141-C-G P3_b2 ***
22365965-C-G 20204079-C-G DYZ19 ***
58839073-G-C 56751798-C-G ***
24869063-A-C 22722916-A-C P3_b2 ***
24912644-C-A 22766497-C-A g1 ***
24940831-T-G 22794684-T-G g1 ***
22433170-T-G 20271284-T-G DYZ19 ***
58838065-T-G 56752806-A-C ***
58828601-T-G 56762270-A-C ***
22920007-A-G 20758121-A-G ***
28814668-T-G 26668521-T-G ***
22481069-C-G 20319183-C-G DYZ19 ***
24965898-G-A 22819751-G-A g1 ***
25138051-T-G 22991904-T-G g1 ***
22503008-C-A 20341122-C-A DYZ19 ***
28556061-C-A 26409914-C-A ***
28457337-A-C 26311190-A-C ***
28234792-T-A 26088645-T-A P1_b4 ***
28209455-C-T 26063308-C-T P1_b4 ***
27692261-A-C 25546114-A-C P1_Y2 ***
25461517-A-T 23315370-A-T P2_r2 ***
27667516-G-C 25521369-G-C P1_Y2 ***
26153630-T-G 24007483-T-G P1_Y1 ***
26684867-T-C 24538720-T-C P1_g2 ***
26120240-A-C 23974093-A-C P1_Y1 4×CTTC***
23223392-T-G 21061506-T-G ***
23475764-A-G 21313878-A-G ***
26677128-A-T 24530981-A-T P1_g2 ***
26636028-A-G 24489881-A-G P1_g2 ***
26508299-T-G 24362152-T-G P1_Y1 ***
26140511-G-T 23994364-G-T P1_Y1 ***
24149923-A-G 22003776-A-G P3_b1 ***
26834373-A-T 24688226-A-T P1_g2 ***
26201316-C-A 24055169-C-A P1_Y1 ***
26242280-C-T 24096133-C-T P1_Y1 ***
26242910-A-C 24096763-A-C P1_Y1 ***
26495392-G-C 24349245-G-C P1_Y1 ***
26421992-A-G 24275845-A-G P1_Y1 ***
26421968-A-G 24275821-A-G P1_Y1 ***
26270412-A-C 24124265-A-C P1_Y1 ***
26421956-A-C 24275809-A-C P1_Y1 ***
26684897-T-G 24538750-T-G P1_g2 ***
26089785-T-G 23943638-T-G P1_Y1 ***
25379051-A-G 23232904-A-G P2_r2 ***
27266610-G-T 25120463-G-T P1_g3 ***
27636173-A-C 25490026-A-C P1_Y2 ***
26344604-T-C 24198457-T-C P1_Y1 ***
27618070-C-A 25471923-C-A P1_Y2 ***
25571585-T-C 23425438-T-C P1_gr1 ***
25800336-G-A 23654189-G-A P1_b3 ***
27445532-C-A 25299385-C-A P1_Y2 ***
27432931-C-A 25286784-C-A P1_g3 ***
27266862-G-A 25120715-G-A P1_g3 ***
27127803-G-T 24981656-G-T P1_g3 ***
26089744-A-G 23943597-A-G P1_Y1 ***
25845001-T-C 23698854-T-C P1_b3 ***
27000785-A-C 24854638-A-C P1_r4 ***
25845022-A-C 23698875-A-C P1_b3 ***
24183791-A-C 22037644-A-C P3_b1 ***
25845026-A-C 23698879-A-C P1_b3 ***
25929016-T-G 23782869-T-G P1_Y1 ***
26042850-G-A 23896703-G-A P1_Y1 ***
26992751-C-G 24846604-C-G P1_r4 ***
24253802-A-G 22107655-A-G P3_b1 ***
24390087-T-G 22243940-T-G ***
20084495-C-T 17972615-C-T P5_Dst ***
58839107-C-A 56751764-G-T ***
13838794-CGGAAATG-TGGAGATT 11718088-CGGAAATG-TGGAGATT ***
13824883-GGAAT-CGAAA 11704177-GGAAT-CGAAA ***
13825037-AC-GA 11704331-AC-GA ***
13832998-CATCGAATT-AATGGAAGG 11712292-CATCGAATT-AATGGAAGG ***
13833616-AGACTGGAAA-GGATTGAAC 11712910-AGACTGGAAA-GGATTGAAC ***
13837370-TGA-GGG 11716664-TGA-GGG ***
13838787-C-GTTGGAGTAGAATGGA 11718081-C-GTTGGAGTAGAATGGA ***
13839285-TCAATC-CGAAAT 11718579-TCAATC-CGAAAT ***
13804498-TGAG-GGAA 11683792-TGAG-GGAA ***
13839357-GAT-AAA 11718651-GAT-AAA ***
13846297-TTAA-CTCT 11725591-TTAA-CTCT ***
13851002-TACCT-GACCA 11730296-TACCT-GACCA ***
13851257-CAATA-AAATG 11730551-CAATA-AAATG ***
13851277-TAATCA-GAAATG 11730571-TAATCA-GAAATG ***
13851329-ATGT-GTGG 11730623-ATGT-GTGG ***
13810291-TTCAAATTGAAA-ATCATATAGAAT 11689585-TTCAAATTGAAA-ATCATATAGAAT ***
13804489-GATTG-AAATA 11683783-GATTG-AAATA ***
13856996-AGACC-GGACT 11736290-AGACC-GGACT ***
13658867-AAATGGAATT-GAATCAATG 11503191-AAATGGAATT-GAATCAATG ***
13461266-AGTAGG-TGTGGT 11305590-AGTAGG-TGTGGT ***
13478889-ATGT-CTGG 11323213-ATGT-CTGG ***
13648143-A-ATGCAG 11492467-A-ATGCAG ***
13648149-TCG-ACA 11492473-TCG-ACA ***
13658772-AAGTGTAATG-GATTGGAATA 11503096-AAGTGTAATG-GATTGGAATA ***
13658787-AAT-TAA 11503111-AAT-TAA ***
13658896-AGAA-GGAC 11503220-AGAA-GGAC ***
13729081-CAG-GAA 11573405-CAG-GAA ***
13659185-ACAAT-TCGAA 11503509-ACAAT-TCGAA ***
13659279-ATGTAATA-GTGAAATG 11503603-ATGTAATA-GTGAAATG ***
13659372-AC-GA 11503696-AC-GA ***
13659397-GAAAG-AAATA 11503721-GAAAG-AAATA ***
13701537-GGG-TGC 11545861-GGG-TGC ***
13711070-GGAAT-ATAATG 11555394-GGAAT-ATAATG ***
13854285-ATA-CTC 11733579-ATA-CTC ***
13859684-TGAATG-AGAGTT 11738978-TGAATG-AGAGTT ***
13449630-AAAA-GAC 11293954-AAAA-GAC ***
22504860-CAGT-TAGG 20342974-CAGT-TAGG DYZ19 ***
18872221-CTTA-TTTC 16760341-CTTA-TTTC ***
19302920-CT-GCA 17191040-CT-GCA ***
19387112-G-GTCATAAATT 17275232-G-GTCATAAATT ***
22248364-GTA-TTC 20086478-GTA-TTC DYZ19 ***
22264961-ATCAA-TTCAG 20103075-ATCAA-TTCAG DYZ19 ***
22503044-CTTAC-ATTAG 20341158-CTTAC-ATTAG DYZ19 ***
22511854-TTT-ATG 20349968-TTT-ATG DYZ19 ***
14784689-TATTC-T 12672759-TATTC-T ***
23325306-TCCCACCCG-CCCCCCCCC 21163420-TCCCACCCG-CCCCCCCCC ***
23486651-TAGAG-AAGAT 21324765-TAGAG-AAGAT ***
25593509-CT-C 23447362-CT-C P1_gr1 18×T***
27462488-T-TAC 25316341-T-TAC P1_Y2 15×AC***
28786889-TGTT-AGTG 26640742-TGTT-AGTG ***
28815103-GTAGC-CTAGT 26668956-GTAGC-CTAGT ***
18124292-TGAAT-GGAAG 16012412-TGAAT-GGAAG ***
14533029-GC-AA 12421230-GC-AA ***
13859706-GATGG-AATGA 11739000-GATGG-AATGA ***
13864542-TATGTCATT-AACGGCAAC 11743836-TATGTCATT-AACGGCAAC ***
13860094-TGAATGC-CGAGTGG 11739388-TGAATGC-CGAGTGG ***
13860363-TAGAT-CGGAA 11739657-TAGAT-CGGAA ***
13861604-GAAT-AATA 11740898-GAAT-AATA ***
13862168-ACTT-GTAG 11741462-ACTT-GTAG ***
13863145-TATT-CATC 11742439-TATT-CATC ***
13864518-CTCGCATGG-GTGGAATAT 11743812-CTCGCATGG-GTGGAATAT ***
13867328-AACTCGAAT-GATTGAAC 11746622-AACTCGAAT-GATTGAAC ***
14429405-T-TCA 12308680-T-TCATA 15×TA***
13867351-TGGG-AGGA 11746645-TGGG-AGGA ***
13867380-ATT-GTG 11746674-ATT-GTG ***
13867969-TCT-ACG 11747263-TCT-ACG ***
13867984-ACT-GCG 11747278-ACT-GCG ***
13868581-GAATGA-ATATCG 11747875-GAATGA-ATATCG ***
13868930-TG-CC 11748224-TG-CC ***
13936215-A-AGAAT 11815509-A-AGAAT ***
13457953-CTCCACTCCACTCCAC-TTCCATTCCAT 11302277-CTCCACTCCACTCCAC-TTCCATTCCAT ***
13447638-CCTGCGAGCTCCAC-TCCGTGAACTGCAT 11291962-CCTGCGAGCTCCAC-TCCGTGAACTGCAT ***
58844135-C-T 56746736-G-A ***
10042367-AA-TG 10204758-AA-TG ***
10056466-CG-GT 10218857-CG-GT ***
10033570-TG-GC 10195961-TG-GC ***
13851586-AGAATAG-GATATCA 11730880-AGAATAG-GATATCA ***
28797853-GAGA-TGGT 26651706-GAGA-TGGT ***
10043546-ATA-TTG 10205937-ATA-TTG ***
13867929-CAGAACTGACT-TGGAATGGACA 11747223-CAGAACTGACT-TGGAATGGACA ***
13682926-GA-TC 11527250-GA-TC ***
13833096-GGC-TGA 11712390-GGC-TGA ***
13659211-GGGATC-AGAGTT 11503535-GGGATC-AGAGTT ***
2688585-C-CAT 2820544-C-CAT 19×AT***
3641042-C-CTTTCT 3773001-C-CTTTCT ***
4000403-A-ATT 4132362-A-ATT 14×T***
4928799-CA-TG 5060758-CA-TG ***
5797468-T-TATAG 5929427-T-TATAG ***
3436403-TCGCCCT-CCACCCG 3568362-TCGCCCT-CCACCCG ***
17787106-C-CA 15675226-C-CA 19×A***
8995633-A-AT 9158024-A-AT 10×T***
13839244-AAG-TAA 11718538-AAG-TAA ***
58853372-C-G 56737499-G-C ***
58878715-A-T 56712156-T-A ***
58896108-C-G 56694763-G-C ***
58900128-T-C 56690743-A-G ***
58900138-A-C 56690733-T-G ***
58907271-A-C 56683600-T-G ***
13859590-GAACAGATTCGAAT-AAACGGACTCAATA 11738884-GAACAGATTCGAAT-AAACGGACTCAATA ***
10015565-AT-GC 10177956-AT-GC ***
13824822-AG-TT 11704116-AG-TT ***
13824829-GAA-TAT 11704123-GAA-TAT ***
22365905-A-T 20204019-A-T DYZ19 ***
13824841-ATGGAAT-GTAGAAC 11704135-ATGGAAT-GTAGAAC ***
13110124-GTC-CTA 10599610-GTC-CTA ***
14467026-TCTATCTAT-C 12346295-TCTATCTAT-C ***
6597340-T-TAAA 6729299-T-TAAA 28×A***
9915665-ACTATA-TATATC 10078056-ACTATA-TATATC ***
13138130-TCG-CCA 10627616-TCG-CCA ***
10069976-CT-AA 10232367-CT-AA ***
10064743-GTATG-TTATT 10227134-GTATG-TTATT ***
10067287-CTTGT-ATTGC 10229678-CTTGT-ATTGC ***
10067308-GTGTC-CTGTT 10229699-GTGTC-CTGTT ***
10067468-TCACA-CTACAT 10229859-TCACA-CTACAT ***
10069947-TC-AT 10232338-TC-AT ***
10069969-AT-GC 10232360-AT-GC ***
10095049-TA-CT 10257440-TA-CT ***
10064432-TG-CA 10226823-TG-CA ***
13110088-CACTTTA-GAGTTTC 10599574-CACTTTA-GAGTTTC ***
13120485-CT-TC 10609971-CT-TC ***
13129382-TAG-AAT 10618868-TAG-AAT ***
13132068-AC-CA 10621554-AC-CA ***
13137115-TC-CT 10626601-TC-CT ***
13137780-TGCCTTGCC-AGCATTCCA 10627266-TGCCTTGCC-AGCATTCCA ***
10064735-TCGGG-T 10227126-TCGGG-T ***
10063921-CAGGT-TAGGC 10226312-CAGGT-TAGGC ***
9919304-AGA-TG 10081695-AGA-TG ***
9997686-CTTAT-TTTA 10160077-CTTAT-TTTA ***
9920473-GC-TT 10082864-GC-TT ***
9924454-GT-AA 10086845-GT-AA ***
9953564-CAAAA-TAAAC 10115955-CAAAA-TAAAC ***
9953614-CT-TA 10116005-CT-TA ***
9965278-AGCAC-GGCAT 10127669-AGCAC-GGCAT ***
9997664-GTAG-ATAA 10160055-GTAG-ATAA ***
10015546-CAGCT-GAGCC 10177937-CAGCT-GAGCC ***
10063622-GA-AG 10226013-GA-AG ***
10015832-TTCC-CTCT 10178223-TTCC-CTCT ***
10017801-CCTTC-TCTTA 10180192-CCTTC-TCTTA ***
10018005-GAGTT-CAGTG 10180396-GAGTT-CAGTG ***
10044843-TTTG-CTTT 10207234-TTTG-CTTT ***
10050227-GAAGT-AAAGG 10212618-GAAGT-AAAGG ***
10062354-CTAA-TTAT 10224745-CTAA-TTAT ***
10063611-TG-CA 10226002-TG-CA ***
22365908-G-C 20204022-G-C DYZ19 ***
20658998-A-T 18497112-A-T P4_Prx ***
22364599-G-T 20202713-G-T DYZ19 ***
10067434-ACCA-GCCG 10229825-ACCA-GCCG ***
22989187-T-G 20827301-T-G ***
22328810-A-C 20166924-A-C DYZ19 ***
27161947-T-A 25015800-T-A P1_g3 ***
58899876-CTCC-TTCA 56690992-GGAG-TGAA ***
13854317-CC-TG 11733611-CC-TG ***
10031693-AGA-GGG 10194084-AGA-GGG ***
9946318-G-T 10108709-G-T ***
9946313-C-T 10108704-C-T ***
10064169-T-A 10226560-T-A A13072 ***
13728370-G-T 11572694-G-T ***
13861967-T-A 11741261-T-A ***
13446527-CTCCATTCCATTCCATTCCATTCCATTCCAT-C 11290851-CTCCATTCCATTCCATTCCATTCCATTCCAT-C 16×TCCAT***
13851710-TTGA-AGAT 11731004-TTGA-AGAT ***
10067405-AAGT-GTGC 10229796-AAGT-GTGC ***
59031513-CC-GG 56885366-CC-GG ***
13857513-CC-AT 11736807-CC-AT ***
13851695-ACAAATG-TCGAATT 11730989-ACAAATG-TCGAATT ***
9956705-GA-CT 10119096-GA-CT ***
9957802-T-C 10120193-T-C ***
10068919-C-G 10231310-C-G ***
10067111-AATACAGT-GAGG 10229502-AATACAGT-GAGG ***
9915625-TGGAG-GGGAT 10078016-TGGAG-GGGAT ***
22481005-C-A 20319119-C-A DYZ19 ***
13728363-C-A 11572687-C-A ***
22503322-G-A 20341436-G-A DYZ19 ***
13833059-CTGAA-ATCAT 11712353-CTGAA-ATCAT ***
9921538-GATAGCAA-AAGAGAAC 10083929-GATAGCAA-AAGAGAAC ***
13804794-CTCGTAT-ATCAAAG 11684088-CTCGTAT-ATCAAAG ***
23486644-A-T 21324758-A-T A12586 ***
22365824-G-C 20203938-G-C DYZ19 ***
13861594-GAACA-AAACG 11740888-GAACA-AAACG ***
22311666-G-A 20149780-G-A DYZ19 ***
4058594-T-A 4190553-T-A ***
4031743-C-T 4163702-C-T ***
3964774-A-C 4096733-A-C ***
3964608-T-G 4096567-T-G ***
3909091-C-A 4041050-C-A ***
3817132-A-G 3949091-A-G ***
3809136-A-T 3941095-A-T 31×T***
2817774-T-C 2949733-T-C ***
2810475-A-C 2942434-A-C ***
4763525-A-G 4895484-A-G ***
10043362-C-T 10205753-C-T ***
22311668-G-A 20149782-G-A DYZ19 ***
10044751-T-C 10207142-T-C ***
10043540-A-G 10205931-A-G ***
10042630-T-C 10205021-T-C ***
10067489-G-C 10229880-G-C ***
10067444-A-G 10229835-A-G ***
18414441-G-A 16302561-G-A P6_Gap ***
10068929-A-G 10231320-A-G ***
9920264-C-A 10082655-C-A Z4879 ***
10042352-T-A 10204743-T-A ***
13110126-C-A 10599612-C-A ***
10042333-A-G 10204724-A-G ***
10043360-A-T 10205751-A-T ***
13866949-GA-TG 11746243-GA-TG ***
13861579-GAT-CAG 11740873-GAT-CAG ***
4275251-T-C 4407210-T-C ***
58855014-C-T 56735857-G-A ***
10066308-G-T 10228699-G-T ***
10049793-C-G 10212184-C-G ***
23900918-T-A 21739032-T-A ***
10043318-T-G 10205709-T-G ***
22481538-G-A 20319652-G-A DYZ19 ***
13440531-G-A 11284855-G-A ***
13110088-C-G 10599574-C-G ***
10044567-C-T 10206958-C-T ***
13339256-A-T 11183580-A-T ***
10049749-C-CA 10212140-C-CA ***
9931606-TGT-GGA 10093997-TGT-GGA ***
58862015-A-C 56728856-T-G ***
13110116-C-A 10599602-C-A ***
13482006-AGTTA-CGT 11326330-AGTTA-CGT ***
22353496-A-T 20191610-A-T DYZ19 ***
13129366-C-T 10618852-C-T ***
58868568-A-T 56722303-T-A ***
22488347-T-C 20326461-T-C DYZ19 ***
9299787-T-G 9462178-T-G ***
13867840-CTC-TTG 11747134-CTC-TTG ***
13704373-GGAAC-AGAAT 11548697-GGAAC-AGAAT ***
10041413-G-T 10203804-G-T FGC36476 ***
22503693-T-C 20341807-T-C DYZ19 ***
22247476-A-G 20085590-A-G DYZ19 ***
13698929-A-G 11543253-A-G ***
13648168-G-A 11492492-G-A ***
22343731-G-T 20181845-G-T DYZ19 ***
20084490-C-T 17972610-C-T P5_Dst ***
21940037-C-CAT 19778151-C-CAT 22×AT***
9946264-A-G 10108655-A-G ***
10070091-TCAC-ACAG 10232482-TCAC-ACAG ***
13556705-T-C 11401029-T-C ***
13868769-CA-TG 11748063-CA-TG ***
13867011-TCTGGAAT-ATTGAAC 11746305-TCTGGAAT-ATTGAAC ***
13728961-GTCA-CTCG 11573285-GTCA-CTCG ***
13446680-CATTCC-T 11291004-CATTCC-T ***
22495626-T-G 20333740-T-G DYZ19 ***
19436493-GCT-G 17324613-GCT-G ***
13440536-C-G 11284860-C-G ***
10064433-G-A 10226824-G-A ***
10064432-T-C 10226823-T-C ***
10050278-G-A 10212669-G-A ***
10050262-C-G 10212653-C-G ***
10044639-T-C 10207030-T-C ***
9953059-C-T 10115450-C-T ***
13110124-G-C 10599610-G-C ***
9976896-G-A 10139287-G-A ***
21154966-C-G 18993080-C-G ***
13556159-C-T 11400483-C-T ***
13423604-G-T 11267928-G-T ***
13408789-A-G 11253113-A-G ***
10066320-A-G 10228711-A-G ***
10064777-A-T 10227168-A-T ***
10064371-A-G 10226762-A-G ***
10050273-A-G 10212664-A-G ***
10050118-T-C 10212509-T-C Z8950 ***
10050110-G-C 10212501-G-C ***
10049992-T-C 10212383-T-C S13195 ***
10043530-C-T 10205921-C-T ***
10043390-T-A 10205781-T-A ***
10014714-A-G 10177105-A-G ***
4077515-T-C 4209474-T-C ***
4319135-G-C 4451094-G-C ***
22364526-G-A 20202640-G-A DYZ19 ***
18408478-C-T 16296598-C-T P6_Gap ***
20425802-T-C 18263916-T-C P5_Dst ***
20420954-G-A 18259068-G-A P5_Dst ***
20363033-A-T 18201147-A-T P5_Dst ***
20243005-A-G 18081119-A-G P5_Dst ***
19845834-A-C 17733954-A-C P5_Prx ***
19803577-T-C 17691697-T-C P5_Prx ***
19756426-A-G 17644546-A-G P5_Prx ***
19746235-A-C 17634355-A-C P5_Prx ***
19386989-T-A 17275109-T-A ***
19386550-T-G 17274670-T-G ***
19302921-T-A 17191041-T-A Y104328 ***
18465453-G-A 16353573-G-A P6_Dst ***
18455174-G-A 16343294-G-A P6_Dst ***
18328834-T-A 16216954-T-A P6_Prx ***
20454948-G-T 18293062-G-T P5_Dst ***
18317719-C-A 16205839-C-A P6_Prx ***
18123741-T-G 16011861-T-G ***
17988226-T-A 15876346-T-A P7_Prx ***
17950835-T-A 15838955-T-A ***
17543782-C-G 15431902-C-G ***
17543748-T-G 15431868-T-G ***
17432081-A-T 15320201-A-T ***
17432076-A-T 15320196-A-T ***
17432075-G-T 15320195-G-T ***
17323774-G-A 15211894-G-A ***
17323764-A-G 15211884-A-G ***
16947545-T-G 14835665-T-G ***
16792142-G-T 14680262-G-T ***
20438905-A-C 18277019-A-C P5_Dst ***
20510927-G-T 18349041-G-T P5_Dst ***
16785920-T-G 14674040-T-G ***
22245422-G-A 20083536-G-A DYZ19 ***
22361408-G-T 20199522-G-T DYZ19 ***
22346721-C-A 20184835-C-A DYZ19 ***
22342224-T-G 20180338-T-G DYZ19 ***
22328791-A-G 20166905-A-G DYZ19 ***
22326434-T-G 20164548-T-G DYZ19 ***
22311695-A-G 20149809-A-G DYZ19 ***
22311688-G-C 20149802-G-C DYZ19 ***
22311207-T-C 20149321-T-C DYZ19 ***
22307013-A-T 20145127-A-T DYZ19 ***
22264973-T-C 20103087-T-C DYZ19 ***
22264947-C-A 20103061-C-A DYZ19 ***
22264936-A-T 20103050-A-T DYZ19 ***
22248364-G-T 20086478-G-T DYZ19 ***
22244548-T-A 20082662-T-A DYZ19 ***
20631600-C-A 18469714-C-A P4_Prx ***
22240918-G-T 20079032-G-T DYZ19 ***
22237326-G-A 20075440-G-A DYZ19 ***
22234824-T-G 20072938-T-G DYZ19 ***
22113217-A-G 19951331-A-G ***
22032192-T-C 19870306-T-C ***
20947235-A-C 18785349-A-C P4_Dst ***
20908422-A-C 18746536-A-C P4_Dst ***
20861166-A-G 18699280-A-G P4_Dst ***
20778903-T-C 18617017-T-C P4_Prx ***
20748907-G-T 18587021-G-T P4_Prx ***
20676071-T-G 18514185-T-G P4_Prx ***
20084460-C-T 17972580-C-T P5_Dst ***
20658781-A-C 18496895-A-C P4_Prx ***
16786550-G-T 14674670-G-T ***
16228018-A-T 14116138-A-T ***
4354381-A-C 4486340-A-C ***
6183171-G-C 6315130-G-C IR3_Dst ***
9668510-A-C 9830901-A-C IR3_Prx ***
9300270-C-A 9462661-C-A ***
8723707-T-C 8855666-T-C ***
8407444-A-G 8539403-A-G ***
7793001-A-C 7924960-A-C ***
7504444-T-C 7636403-T-C IR1_L ***
7317589-A-C 7449548-A-C ***
7173790-A-G 7305749-A-G ***
6508710-T-G 6640669-T-G ***
6295755-A-C 6427714-A-C IR3_Dst ***
6295666-C-A 6427625-C-A IR3_Dst ***
6295665-A-C 6427624-A-C IR3_Dst ***
6216152-T-A 6348111-T-A IR3_Dst ***
6173304-T-C 6305263-T-C IR3_Dst ***
9782972-A-C 9945363-A-C ***
5794915-C-G 5926874-C-G ***
5479570-G-A 5611529-G-A ***
5479547-C-A 5611506-C-A ***
5477917-A-G 5609876-A-G ***
5477175-C-T 5609134-C-T ***
5476471-C-G 5608430-C-G ***
5476466-A-G 5608425-A-G ***
5476442-A-G 5608401-A-G ***
5436893-A-C 5568852-A-C ***
5436881-T-C 5568840-T-C ***
5351295-T-A 5483254-T-A ***
5089292-G-T 5221251-G-T ***
5044408-C-G 5176367-C-G ***
9740260-T-G 9902651-T-G IR3_Prx ***
9909005-G-A 10071396-G-A ***
15882103-T-C 13770223-T-C ***
13454903-A-G 11299227-A-G ***
15641474-A-T 13529594-A-T ***
14986481-A-G 12874549-A-G ***
14986466-C-T 12874534-C-T ***
14704048-A-G 12592114-A-G ***
14630479-T-C 12518548-T-C ***
13879838-A-G 11759132-A-G ***
13843854-C-A 11723148-C-A ***
13813678-A-G 11692972-A-G ***
13731686-T-A 11576010-T-A ***
13728381-A-G 11572705-A-G ***
13728326-A-C 11572650-A-C ***
13728325-G-T 11572649-G-T ***
13699328-T-A 11543652-T-A ***
13223469-G-A 11067793-G-A ***
9920461-T-G 10082852-T-G ***
13223282-A-G 11067606-A-G ***
13222626-G-C 11066950-G-C ***
13222093-A-G 11066417-A-G ***
13132048-G-A 10621534-G-A ***
13129382-T-A 10618868-T-A ***
13113493-T-C 10602979-T-C ***
13113429-T-C 10602915-T-C ***
10095106-A-G 10257497-A-G ***
10095071-T-A 10257462-T-A ***
10067273-A-G 10229664-A-G ***
10066300-G-T 10228691-G-T ***
10044358-G-A 10206749-G-A ***
10032960-A-G 10195351-A-G ***
9974049-C-T 10136440-C-T ***
58907275-ATT-TTC 56683594-AAT-GAA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.




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