Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > Z295/S1217

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC-BigY
26BS5
4482104-C-T 4614063-C-T FGC46896 +
23814376-A-G 21652490-A-G FGC46941 Y+
19302915-GCT-G 17191035-GCT-G +
14460197-C-T 12339470-C-T FGC46914 YY+
22979493-T-C 20817607-T-C FGC46939 YY+
17249273-C-T 15137393-C-T FGC46926 Y+
17266783-G-T 15154903-G-T FGC46927 Y+
16513917-T-C 14402037-T-C FGC46923 YY+
16410857-C-A 14298977-C-A FGC46922 Y+
15025048-G-T 12913136-G-T FGC46915 YY+
24424156-T-G 22278009-T-G FGC46942 Y+
8613014-C-G 8744973-C-G FGC46905 YY+
8908321-C-T 9040280-C-T FGC46906 +
9022267-C-T 9184658-C-T FGC46907 Y+
9818717-C-T 9981108-C-T FGC46908 YY+
9864728-T-G 10027119-T-G FGC46909 YY+
16308643-G-T 14196763-G-T FGC46919 YY+
22155061-G-A 19993175-G-A FGC46936 Y+
16234318-G-A 14122438-G-A FGC46918 YY+
21072261-C-A 18910375-C-A FGC46932 YY+
4471861-C-A 4603820-C-A FGC46895 +
4344966-C-G 4476925-C-G FGC46894 +
4790970-T-C 4922929-T-C FGC46898 *
23586096-G-T 21424210-G-T FGC46940 YY*
14320485-C-T 12199779-C-T FGC46913 YY*
5822672-A-T 5954631-A-T FGC46900 *
14063137-C-A 11942431-C-A FGC46912 YY*
22923962-G-C 20762076-G-C FGC46938 YY*
22526610-C-A 20364724-C-A FGC46937 Y*
5710249-C-A 5842208-C-A FGC46899 *
15350964-C-A 13239083-C-A FGC46917 YY*
13848721-T-C 11728015-T-C FGC46911 *
6628564-C-T 6760523-C-T FGC46901 YY*
6826777-T-G 6958736-T-G FGC46902 YY*
7211204-G-T 7343163-G-T FGC46903 YY*
13345697-G-C 11190021-G-C FGC46910 *
20950774-C-T 18788888-C-T FGC46931 P4_Dst *
21972941-C-G 19811055-C-G FGC46935 YY*
15113163-G-A 13001250-G-A FGC46916 YY*
7869717-C-T 8001676-C-T FGC46904 Z43260 YY*
4767966-G-A 4899925-G-A FGC46897 *
7178299-G-C 7310258-G-C Z13028 YY*
17854632-G-A 15742752-G-A FGC46929 Y*
3011982-T-A 3143941-T-A FGC46892 *
22767743-CT-C 20605857-CT-C *
17425056-C-T 15313176-C-T FGC46928 YY*
18797228-A-G 16685348-A-G FGC46930 Y*
21797677-T-C 19635791-T-C FGC46934 YY*
16897314-T-C 14785434-T-C FGC46925 YY*
4256852-C-G 4388811-C-G FGC46893 *
21585666-C-T 19423780-C-T FGC46933 Y*
16314868-C-T 14202988-C-T FGC46920 YY*
16684063-C-T 14572183-C-T FGC46924 Y*
16348357-G-A 14236477-G-A FGC46921 YY*
6020697-T-G 6152656-T-G Z3156 **
13544730-T-C 11389054-T-C **
18123741-T-A 16011861-T-A **
26212735-C-T 24066588-C-T P1_Y1 **
22021414-A-C 19859528-A-C **
4976541-T-C 5108500-T-C F9199 FGC18529 **
14612239-G-GGATAGATAGATA 12500445-G-GGATAGATAGATA 9×GATA**
14533029-G-A 12421230-G-A Y91649 **
2817759-T-G 2949718-T-G **
4786521-A-G 4918480-A-G Y82017 **
8394207-A-G 8526166-A-G **
8901423-ATGTATATATAATG-A 9033382-ATGTATATATAATG-A **
4976584-C-T 5108543-C-T Y82040 **
13270288-A-ATTTTT 11114612-A-ATTTTT 10×T**
22433051-A-G 20271165-A-G DYZ19 **
5235847-TACAC-T 5367806-TACAC-T 11×AC**
23077104-G-T 20915218-G-T **
5795879-C-T 5927838-C-T **
23865203-T-C 21703317-T-C **
7474374-A-AAGAG 7606333-A-AAGAG IR1_L 21×AG**
23812375-C-G 21650489-C-G BY180092 **
23825111-G-T 21663225-G-T **
24007258-A-G 21861111-A-G **
14998620-A-C 12886705-A-C **
21547449-T-C 19385563-T-C **
14673895-G-A 12561961-G-A **
13964452-C-A 11843746-C-A Y89927 **
6410949-AAAAT-A 6542908-AAAAT-A 10×AAAT**
22996969-GATAT-G 20835083-GATAT-G 21×AT**
59005842-C-G 56859695-C-G **
14533030-C-A 12421231-C-A Y91650 **
14673894-T-A 12561960-T-A **
22478958-G-C 20317072-G-C BY53225 DYZ19 **
13717054-C-T 11561378-C-T BY54446 **
3436380-T-C 3568339-T-C L327 **
19034739-G-T 16922859-G-T **
13689724-A-AGGAAT 11534048-A-AGGAAT **
14784680-CATTCTTCTT-C 12672750-CATTCTTCTT-C **
20931853-A-ATGTG 18769967-A-ATGTG P4_Dst 18×TG**
16860749-CAAAAAAA-C 14748869-CAAAAAAA-C 24×A**
17016177-GTAAA-G 14904297-GTAAA-G **
18612142-TCTGTTTCTGAGA-T 16500262-TCTGTTTCTGAGA-T **
24387347-C-CAT 22241200-C-CAT **
13693307-A-T 11537631-A-T BY211047 **
20084485-C-T 17972605-C-T P5_Dst **
26153630-T-G 24007483-T-G P1_Y1 ***
26421968-A-G 24275821-A-G P1_Y1 ***
24869063-A-C 22722916-A-C P3_b2 ***
18455174-G-A 16343294-G-A P6_Dst ***
24659288-C-G 22513141-C-G P3_b2 ***
26270412-A-C 24124265-A-C P1_Y1 ***
18465453-G-A 16353573-G-A P6_Dst ***
26344604-T-C 24198457-T-C P1_Y1 ***
26352450-A-T 24206303-A-T P1_Y1 ***
26421956-A-C 24275809-A-C P1_Y1 ***
24390087-T-G 22243940-T-G ***
24940831-T-G 22794684-T-G g1 ***
24253802-A-G 22107655-A-G P3_b1 ***
26421992-A-G 24275845-A-G P1_Y1 ***
24232068-T-G 22085921-T-G P3_b1 ***
24183791-A-C 22037644-A-C P3_b1 ***
24149923-A-G 22003776-A-G P3_b1 ***
26495392-G-C 24349245-G-C P1_Y1 ***
26508299-T-G 24362152-T-G P1_Y1 ***
26636028-A-G 24489881-A-G P1_g2 ***
26677128-A-T 24530981-A-T P1_g2 ***
26684867-T-C 24538720-T-C P1_g2 ***
24912644-C-A 22766497-C-A g1 ***
26242910-A-C 24096763-A-C P1_Y1 ***
26201316-C-A 24055169-C-A P1_Y1 ***
25845001-T-C 23698854-T-C P1_b3 ***
26140511-G-T 23994364-G-T P1_Y1 ***
26120240-A-C 23974093-A-C P1_Y1 4×CTTC***
26089785-T-G 23943638-T-G P1_Y1 ***
18328834-T-A 16216954-T-A P6_Prx ***
26089744-A-G 23943597-A-G P1_Y1 ***
26042850-G-A 23896703-G-A P1_Y1 ***
25929016-T-G 23782869-T-G P1_Y1 ***
25845026-A-C 23698879-A-C P1_b3 ***
18408478-C-T 16296598-C-T P6_Gap ***
25845022-A-C 23698875-A-C P1_b3 ***
25800336-G-A 23654189-G-A P1_b3 ***
24965898-G-A 22819751-G-A g1 ***
25571585-T-C 23425438-T-C P1_gr1 ***
25461517-A-T 23315370-A-T P2_r2 ***
18317719-C-A 16205839-C-A P6_Prx ***
25379051-A-G 23232904-A-G P2_r2 ***
25379042-A-G 23232895-A-G P2_r2 ***
25351591-G-T 23205444-G-T P2_r1 ***
25256074-A-C 23109927-A-C P2_r1 ***
25256073-A-C 23109926-A-C P2_r1 ***
25138051-T-G 22991904-T-G g1 ***
26242280-C-T 24096133-C-T P1_Y1 ***
19302921-T-A 17191041-T-A Y104328 ***
19756426-A-G 17644546-A-G P5_Prx ***
19386550-T-G 17274670-T-G ***
22307013-A-T 20145127-A-T DYZ19 ***
22346721-C-A 20184835-C-A DYZ19 ***
22342224-T-G 20180338-T-G DYZ19 ***
22328791-A-G 20166905-A-G DYZ19 ***
26834373-A-T 24688226-A-T P1_g2 ***
20676071-T-G 18514185-T-G P4_Prx ***
22326434-T-G 20164548-T-G DYZ19 ***
20748907-G-T 18587021-G-T P4_Prx ***
22311695-A-G 20149809-A-G DYZ19 ***
20778903-T-C 18617017-T-C P4_Prx ***
22311688-G-C 20149802-G-C DYZ19 ***
22311207-T-C 20149321-T-C DYZ19 ***
22264973-T-C 20103087-T-C DYZ19 ***
20658998-A-T 18497112-A-T P4_Prx ***
20861166-A-G 18699280-A-G P4_Dst ***
22264947-C-A 20103061-C-A DYZ19 ***
22264936-A-T 20103050-A-T DYZ19 ***
22248364-G-T 20086478-G-T DYZ19 ***
22245422-G-A 20083536-G-A DYZ19 ***
22244548-T-A 20082662-T-A DYZ19 ***
22240918-G-T 20079032-G-T DYZ19 ***
22237326-G-A 20075440-G-A DYZ19 ***
22234824-T-G 20072938-T-G DYZ19 ***
20908422-A-C 18746536-A-C P4_Dst ***
22113217-A-G 19951331-A-G ***
22032192-T-C 19870306-T-C ***
22361408-G-T 20199522-G-T DYZ19 ***
22364526-G-A 20202640-G-A DYZ19 ***
19386989-T-A 17275109-T-A ***
22636615-C-T 20474729-C-T ***
19746235-A-C 17634355-A-C P5_Prx ***
20947235-A-C 18785349-A-C P4_Dst ***
19803577-T-C 17691697-T-C P5_Prx ***
19845834-A-C 17733954-A-C P5_Prx ***
20243005-A-G 18081119-A-G P5_Dst ***
20363033-A-T 18201147-A-T P5_Dst ***
20420954-G-A 18259068-G-A P5_Dst ***
20425802-T-C 18263916-T-C P5_Dst ***
23475764-A-G 21313878-A-G ***
23223392-T-G 21061506-T-G ***
20438905-A-C 18277019-A-C P5_Dst ***
22920007-A-G 20758121-A-G ***
22511856-T-G 20349970-T-G DYZ19 ***
20658781-A-C 18496895-A-C P4_Prx ***
22511854-T-A 20349968-T-A DYZ19 ***
22504276-C-A 20342390-C-A DYZ19 ***
22503008-C-A 20341122-C-A DYZ19 ***
20454948-G-T 18293062-G-T P5_Dst ***
22481069-C-G 20319183-C-G DYZ19 ***
22433170-T-G 20271284-T-G DYZ19 ***
20510927-G-T 18349041-G-T P5_Dst ***
22365965-C-G 20204079-C-G DYZ19 ***
22365908-G-C 20204022-G-C DYZ19 ***
22365905-A-T 20204019-A-T DYZ19 ***
22364599-G-T 20202713-G-T DYZ19 ***
20631600-C-A 18469714-C-A P4_Prx ***
26684897-T-G 24538750-T-G P1_g2 ***
27829317-C-A 25683170-C-A P1_Y2 ***
26992751-C-G 24846604-C-G P1_r4 ***
13711070-GGAAT-ATAATG 11555394-GGAAT-ATAATG ***
13658867-AAATGGAATT-GAATCAATG 11503191-AAATGGAATT-GAATCAATG ***
13658896-AGAA-GGAC 11503220-AGAA-GGAC ***
13659185-ACAAT-TCGAA 11503509-ACAAT-TCGAA ***
13659279-ATGTAATA-GTGAAATG 11503603-ATGTAATA-GTGAAATG ***
13659372-AC-GA 11503696-AC-GA ***
13659397-GAAAG-AAATA 11503721-GAAAG-AAATA ***
13701537-GGG-TGC 11545861-GGG-TGC ***
13707692-TGC-GGA 11552016-TGC-GGA ***
13729081-CAG-GAA 11573405-CAG-GAA ***
13658772-AAGTGTAATG-GATTGGAATA 11503096-AAGTGTAATG-GATTGGAATA ***
13804489-GATTG-AAATA 11683783-GATTG-AAATA ***
13804498-TGAG-GGAA 11683792-TGAG-GGAA ***
13810291-TTCAAATTGAAA-ATCATATAGAAT 11689585-TTCAAATTGAAA-ATCATATAGAAT ***
13824883-GGAAT-CGAAA 11704177-GGAAT-CGAAA ***
13825037-AC-GA 11704331-AC-GA ***
13832998-CATCGAATT-AATGGAAGG 11712292-CATCGAATT-AATGGAAGG ***
13833616-AGACTGGAAA-GGATTGAAC 11712910-AGACTGGAAA-GGATTGAAC ***
13837370-TGA-GGG 11716664-TGA-GGG ***
13838787-C-GTTGGAGTAGAATGGA 11718081-C-GTTGGAGTAGAATGGA ***
13658787-AAT-TAA 11503111-AAT-TAA ***
13648149-TCG-ACA 11492473-TCG-ACA ***
13839285-TCAATC-CGAAAT 11718579-TCAATC-CGAAAT ***
13129382-TAG-AAT 10618868-TAG-AAT ***
10067308-GTGTC-CTGTT 10229699-GTGTC-CTGTT ***
10067468-TCACA-CTACAT 10229859-TCACA-CTACAT ***
10069947-TC-AT 10232338-TC-AT ***
10069969-AT-GC 10232360-AT-GC ***
10069976-CT-AA 10232367-CT-AA ***
10095049-TA-CT 10257440-TA-CT ***
13110088-CACTTTA-GAGTTTC 10599574-CACTTTA-GAGTTTC ***
13120485-CT-TC 10609971-CT-TC ***
13132068-AC-CA 10621554-AC-CA ***
13648143-A-ATGCAG 11492467-A-ATGCAG ***
13137115-TC-CT 10626601-TC-CT ***
13137780-TGCCTTGCC-AGCATTCCA 10627266-TGCCTTGCC-AGCATTCCA ***
13138130-TCG-CCA 10627616-TCG-CCA ***
13447638-CCTGCGAGCTCCAC-TCCGTGAACTGCAT 11291962-CCTGCGAGCTCCAC-TCCGTGAACTGCAT ***
13449630-AAAA-GAC 11293954-AAAA-GAC ***
13457953-CTCCACTCCACTCCAC-TTCCATTCCAT 11302277-CTCCACTCCACTCCAC-TTCCATTCCAT ***
13461266-AGTAGG-TGTGGT 11305590-AGTAGG-TGTGGT ***
13478889-ATGT-CTGG 11323213-ATGT-CTGG ***
13616427-T-TA 11460751-T-TA 28×A***
13838794-CGGAAATG-TGGAGATT 11718088-CGGAAATG-TGGAGATT ***
13839357-GAT-AAA 11718651-GAT-AAA ***
10064743-GTATG-TTATT 10227134-GTATG-TTATT ***
22248364-GTA-TTC 20086478-GTA-TTC DYZ19 ***
14429405-T-TCA 12308680-T-TCATA 15×TA***
14533029-GC-AA 12421230-GC-AA ***
14613459-CT-C 12501657-CT-C 26×T***
14784689-TATTC-T 12672759-TATTC-T ***
18124292-TGAAT-GGAAG 16012412-TGAAT-GGAAG ***
18872221-CTTA-TTTC 16760341-CTTA-TTTC ***
19302920-CT-GCA 17191040-CT-GCA ***
19387112-G-GTCATAAATT 17275232-G-GTCATAAATT ***
22264961-ATCAA-TTCAG 20103075-ATCAA-TTCAG DYZ19 ***
13868930-TG-CC 11748224-TG-CC ***
22503044-CTTAC-ATTAG 20341158-CTTAC-ATTAG DYZ19 ***
22504860-CAGT-TAGG 20342974-CAGT-TAGG DYZ19 ***
22511854-TTT-ATG 20349968-TTT-ATG DYZ19 ***
23325306-TCCCACCCG-CCCCCCCCC 21163420-TCCCACCCG-CCCCCCCCC ***
23486651-TAGAG-AAGAT 21324765-TAGAG-AAGAT ***
25593509-CT-C 23447362-CT-C P1_gr1 18×T***
27462488-T-TAC 25316341-T-TAC P1_Y2 15×AC***
28786889-TGTT-AGTG 26640742-TGTT-AGTG ***
28815103-GTAGC-CTAGT 26668956-GTAGC-CTAGT ***
13936215-A-AGAAT 11815509-A-AGAAT ***
13868581-GAATGA-ATATCG 11747875-GAATGA-ATATCG ***
13846297-TTAA-CTCT 11725591-TTAA-CTCT ***
13860094-TGAATGC-CGAGTGG 11739388-TGAATGC-CGAGTGG ***
13851002-TACCT-GACCA 11730296-TACCT-GACCA ***
13851257-CAATA-AAATG 11730551-CAATA-AAATG ***
13851277-TAATCA-GAAATG 11730571-TAATCA-GAAATG ***
13851329-ATGT-GTGG 11730623-ATGT-GTGG ***
13854285-ATA-CTC 11733579-ATA-CTC ***
13856996-AGACC-GGACT 11736290-AGACC-GGACT ***
13859684-TGAATG-AGAGTT 11738978-TGAATG-AGAGTT ***
13859706-GATGG-AATGA 11739000-GATGG-AATGA ***
13860363-TAGAT-CGGAA 11739657-TAGAT-CGGAA ***
13867984-ACT-GCG 11747278-ACT-GCG ***
13861604-GAAT-AATA 11740898-GAAT-AATA ***
13862168-ACTT-GTAG 11741462-ACTT-GTAG ***
13863145-TATT-CATC 11742439-TATT-CATC ***
13864518-CTCGCATGG-GTGGAATAT 11743812-CTCGCATGG-GTGGAATAT ***
13864542-TATGTCATT-AACGGCAAC 11743836-TATGTCATT-AACGGCAAC ***
13867328-AACTCGAAT-GATTGAAC 11746622-AACTCGAAT-GATTGAAC ***
13867351-TGGG-AGGA 11746645-TGGG-AGGA ***
13867380-ATT-GTG 11746674-ATT-GTG ***
13867969-TCT-ACG 11747263-TCT-ACG ***
10067287-CTTGT-ATTGC 10229678-CTTGT-ATTGC ***
10064735-TCGGG-T 10227126-TCGGG-T ***
27000785-A-C 24854638-A-C P1_r4 ***
58843871-A-T 56747000-T-A ***
28556061-C-A 26409914-C-A ***
28814668-T-G 26668521-T-G ***
58828601-T-G 56762270-A-C ***
58831343-T-C 56759528-A-G ***
58838065-T-G 56752806-A-C ***
58839073-G-C 56751798-C-G ***
58839102-A-G 56751769-T-C ***
58839107-C-A 56751764-G-T ***
58844135-C-T 56746736-G-A ***
28234792-T-A 26088645-T-A P1_b4 ***
58853372-C-G 56737499-G-C ***
58865545-T-G 56725326-A-C ***
58878715-A-T 56712156-T-A ***
58890276-C-T 56700595-G-A ***
58896108-C-G 56694763-G-C ***
58900128-T-C 56690743-A-G ***
58900138-A-C 56690733-T-G ***
58907271-A-C 56683600-T-G ***
13839244-AAG-TAA 11718538-AAG-TAA ***
28457337-A-C 26311190-A-C ***
28209455-C-T 26063308-C-T P1_b4 ***
13824822-AG-TT 11704116-AG-TT ***
27692261-A-C 25546114-A-C P1_Y2 ***
27127803-G-T 24981656-G-T P1_g3 ***
27266610-G-T 25120463-G-T P1_g3 ***
27266862-G-A 25120715-G-A P1_g3 ***
27432931-C-A 25286784-C-A P1_g3 ***
27445532-C-A 25299385-C-A P1_Y2 ***
27618070-C-A 25471923-C-A P1_Y2 ***
27636173-A-C 25490026-A-C P1_Y2 ***
27667516-G-C 25521369-G-C P1_Y2 ***
27821867-T-G 25675720-T-G P1_Y2 ***
28191682-T-G 26045535-T-G P1_b4 ***
27873356-A-C 25727209-A-C P1_Y2 ***
27981993-C-G 25835846-C-G P1_Y2 ***
27981996-G-C 25835849-G-C P1_Y2 ***
28018177-T-G 25872030-T-G P1_Y2 ***
28019752-T-A 25873605-T-A P1_Y2 ***
28062620-T-G 25916473-T-G P1_Y2 ***
28062642-A-C 25916495-A-C P1_Y2 ***
28090189-G-T 25944042-G-T P1_Y2 ***
28090222-A-C 25944075-A-C P1_Y2 ***
13859590-GAACAGATTCGAAT-AAACGGACTCAATA 11738884-GAACAGATTCGAAT-AAACGGACTCAATA ***
13824829-GAA-TAT 11704123-GAA-TAT ***
10064432-TG-CA 10226823-TG-CA ***
10015546-CAGCT-GAGCC 10177937-CAGCT-GAGCC ***
9919304-AGA-TG 10081695-AGA-TG ***
9920473-GC-TT 10082864-GC-TT ***
9924454-GT-AA 10086845-GT-AA ***
9953564-CAAAA-TAAAC 10115955-CAAAA-TAAAC ***
9953614-CT-TA 10116005-CT-TA ***
9965278-AGCAC-GGCAT 10127669-AGCAC-GGCAT ***
9997664-GTAG-ATAA 10160055-GTAG-ATAA ***
9997686-CTTAT-TTTA 10160077-CTTAT-TTTA ***
10015832-TTCC-CTCT 10178223-TTCC-CTCT ***
8995633-A-AT 9158024-A-AT 10×T***
10017801-CCTTC-TCTTA 10180192-CCTTC-TCTTA ***
10018005-GAGTT-CAGTG 10180396-GAGTT-CAGTG ***
10044843-TTTG-CTTT 10207234-TTTG-CTTT ***
10050227-GAAGT-AAAGG 10212618-GAAGT-AAAGG ***
10062354-CTAA-TTAT 10224745-CTAA-TTAT ***
10063457-AG-A 10225848-AG-A ***
10063611-TG-CA 10226002-TG-CA ***
10063622-GA-AG 10226013-GA-AG ***
10063921-CAGGT-TAGGC 10226312-CAGGT-TAGGC ***
9915665-ACTATA-TATATC 10078056-ACTATA-TATATC ***
7536337-C-CA 7668296-C-CA 28×A***
13824841-ATGGAAT-GTAGAAC 11704135-ATGGAAT-GTAGAAC ***
28797853-GAGA-TGGT 26651706-GAGA-TGGT ***
13110124-GTC-CTA 10599610-GTC-CTA ***
14467026-TCTATCTAT-C 12346295-TCTATCTAT-C ***
10015565-AT-GC 10177956-AT-GC ***
13833096-GGC-TGA 11712390-GGC-TGA ***
3436403-TCGCCCT-CCACCCG 3568362-TCGCCCT-CCACCCG ***
10056466-CG-GT 10218857-CG-GT ***
10033570-TG-GC 10195961-TG-GC ***
13851586-AGAATAG-GATATCA 11730880-AGAATAG-GATATCA ***
10043546-ATA-TTG 10205937-ATA-TTG ***
6597340-T-TAAA 6729299-T-TAAA 28×A***
13867929-CAGAACTGACT-TGGAATGGACA 11747223-CAGAACTGACT-TGGAATGGACA ***
10042367-AA-TG 10204758-AA-TG ***
13682926-GA-TC 11527250-GA-TC ***
13659211-GGGATC-AGAGTT 11503535-GGGATC-AGAGTT ***
2688585-C-CAT 2820544-C-CAT 19×AT***
3641042-C-CTTTCT 3773001-C-CTTTCT ***
4000403-A-ATT 4132362-A-ATT 14×T***
4928799-CA-TG 5060758-CA-TG ***
5797468-T-TATAG 5929427-T-TATAG ***
18123741-T-G 16011861-T-G ***
20084495-C-T 17972615-C-T P5_Dst ***
17988226-T-A 15876346-T-A P7_Prx ***
10050273-A-G 10212664-A-G ***
10043530-C-T 10205921-C-T ***
10044857-T-C 10207248-T-C ***
10045142-A-C 10207533-A-C ***
10049992-T-C 10212383-T-C S13195 ***
10050076-C-T 10212467-C-T ***
10050110-G-C 10212501-G-C ***
10050118-T-C 10212509-T-C Z8950 ***
10063478-G-A 10225869-G-A Z37795 ***
10043390-T-A 10205781-T-A ***
10064371-A-G 10226762-A-G ***
10064777-A-T 10227168-A-T ***
10066320-A-G 10228711-A-G ***
10067389-C-T 10229780-C-T ***
10067406-A-T 10229797-A-T ***
13223062-T-G 11067386-T-G ***
13407110-C-G 11251434-C-G ***
10043415-A-C 10205806-A-C ***
10042736-T-G 10205127-T-G ***
13423604-G-T 11267928-G-T ***
22353496-A-T 20191610-A-T DYZ19 ***
10064376-G-A 10226767-G-A ***
13833050-AC-TG 11712344-AC-TG ***
13859977-GTGTAATA-TCGTTATG 11739271-GTGTAATA-TCGTTATG ***
10064272-ATGGTGTGAC-GTAGGCTGAA 10226663-ATGGTGTGAC-GTAGGCTGAA ***
13833026-GGAC-TGAA 11712320-GGAC-TGAA ***
13851603-TATTGAAT-AATGGAAG 11730897-TATTGAAT-AATGGAAG ***
13859991-TATTGAATGGG-CATCGA 11739285-TATTGAATGGG-CATCGA ***
17597187-G-T 15485307-G-T ***
10042577-A-T 10204968-A-T ***
4134484-C-A 4266443-C-A 18×A***
9925353-G-T 10087744-G-T ***
9946264-A-G 10108655-A-G ***
9953093-A-C 10115484-A-C ***
9953211-G-A 10115602-G-A ***
9976896-G-A 10139287-G-A ***
10014714-A-G 10177105-A-G ***
10042527-C-G 10204918-C-G ***
13408789-A-G 11253113-A-G ***
13556159-C-T 11400483-C-T ***
20424785-AAATG-A 18262899-AAATG-A P5_Dst ***
22495626-T-G 20333740-T-G DYZ19 ***
10067312-C-T 10229703-C-T ***
13440536-C-G 11284860-C-G ***
13528880-A-G 11373204-A-G ***
13528893-C-T 11373217-C-T ***
13689723-C-CAGGAA 11534047-C-CAGGAA ***
19436493-GCT-G 17324613-GCT-G ***
22264965-A-G 20103079-A-G FGC38342 DYZ19 ***
13446680-CATTCC-T 11291004-CATTCC-T ***
10067174-A-C 10229565-A-C ***
13728961-GTCA-CTCG 11573285-GTCA-CTCG ***
13867011-TCTGGAAT-ATTGAAC 11746305-TCTGGAAT-ATTGAAC ***
13868769-CA-TG 11748063-CA-TG ***
10070091-TCAC-ACAG 10232482-TCAC-ACAG ***
13861579-GAT-CAG 11740873-GAT-CAG ***
13861594-GAACA-AAACG 11740888-GAACA-AAACG ***
13866949-GA-TG 11746243-GA-TG ***
10067303-T-A 10229694-T-A F18099 ***
10064433-G-A 10226824-G-A ***
21154966-C-G 18993080-C-G ***
16364058-CTATA-C 14252178-CTATA-C 27×TA***
24386992-CTA-C 22240845-CTA-C ***
13830390-T-G 11709684-T-G ***
58851841-C-T 56739030-G-A ***
10068846-T-C 10231237-T-C ***
13869489-AT-CG 11748783-AT-CG ***
13833226-TGACTG-CGATTTC 11712520-TGACTG-CGATTTC ***
22229345-ATTT-GGTC 20067459-ATTT-GGTC DYZ19 ***
10068829-CAGACAAGTAGTGT-TAGAAAAGCAGAG 10231220-CAGACAAGTAGTGT-TAGAAAAGCAGAG ***
10064432-T-C 10226823-T-C ***
10068859-TAAAG-CAAAA 10231250-TAAAG-CAAAA ***
13110124-G-C 10599610-G-C ***
13556705-T-C 11401029-T-C ***
9953059-C-T 10115450-C-T ***
10042924-C-T 10205315-C-T ***
10044639-T-C 10207030-T-C ***
10050262-C-G 10212653-C-G ***
10050278-G-A 10212669-G-A ***
9957933-C-G 10120324-C-G ***
21940037-C-CAT 19778151-C-CAT 22×AT***
22311556-A-C 20149670-A-C DYZ19 ***
28587818-TCT-CCC 26441671-TCT-CCC ***
13453414-TATTTCATG-CATTCCATT 11297738-TATTTCATG-CATTCCATT ***
13704373-GGAAC-AGAAT 11548697-GGAAC-AGAAT ***
13799101-AACG-GACT 11678395-AACG-GACT ***
13861527-TA-CT 11740821-TA-CT ***
13867840-CTC-TTG 11747134-CTC-TTG ***
13867849-ATCG-CTGT 11747143-ATCG-CTGT ***
22241598-CAGT-TAGC 20079712-CAGT-TAGC DYZ19 ***
28802537-GGC-TGG 26656390-GGC-TGG ***
20084465-C-T 17972585-C-T BY212108 P5_Dst ***
28802544-GAAC-TAAT 26656397-GAAC-TAAT ***
9952814-G-T 10115205-G-T ***
9946118-T-G 10108509-T-G ***
22311188-T-C 20149302-T-C DYZ19 ***
9944533-TGAAA-GGAAC 10106924-TGAAA-GGAAC ***
9953788-AT-GC 10116179-AT-GC ***
9299787-T-G 9462178-T-G ***
13489766-AC-CG 11334090-AC-CG ***
10041413-G-T 10203804-G-T FGC36476 ***
58868568-A-T 56722303-T-A ***
22343731-G-T 20181845-G-T DYZ19 ***
20084470-C-T 17972590-C-T P5_Dst ***
20084490-C-T 17972610-C-T P5_Dst ***
13468398-G-A 11312722-G-A ***
13468401-G-C 11312725-G-C ***
13545130-T-G 11389454-T-G ***
22503111-G-C 20341225-G-C DYZ19 ***
58882934-T-A 56707937-A-T ***
13810314-G-C 11689608-G-C ***
6347812-AAG-GAA 6479771-AAG-GAA ***
13648168-G-A 11492492-G-A ***
13698929-A-G 11543253-A-G ***
13659227-T-G 11503551-T-G ***
13869400-A-G 11748694-A-G ***
28588206-T-C 26442059-T-C S26593 ***
22247476-A-G 20085590-A-G FGC79068 DYZ19 ***
9919309-T-C 10081700-T-C ***
22503693-T-C 20341807-T-C DYZ19 ***
22488347-T-C 20326461-T-C DYZ19 ***
13129366-C-T 10618852-C-T ***
13659237-G-A 11503561-G-A ***
10043318-T-G 10205709-T-G ***
10044567-C-T 10206958-C-T ***
27997643-GA-G 25851496-GA-G P1_Y2 16×A***
13110088-C-G 10599574-C-G ***
13531507-A-G 11375831-A-G F10891 ***
13440531-G-A 11284855-G-A ***
22481538-G-A 20319652-G-A DYZ19 ***
10017998-T-A 10180389-T-A ***
23900918-T-A 21739032-T-A ***
9950584-T-C 10112975-T-C ZS1362 ***
9944862-T-C 10107253-T-C ***
9921530-G-T 10083921-G-T ***
9944224-C-A 10106615-C-A ***
10066308-G-T 10228699-G-T ***
9944214-ACATC-GCATT 10106605-ACATC-GCATT ***
9953463-ACTGCTTAG-TCTGGTTAT 10115854-ACTGCTTAG-TCTGGTTAT ***
13109928-G-C 10599414-G-C ***
15320658-G-GGAA 13208764-G-GGAA ***
13339256-A-T 11183580-A-T ***
58840466-C-T 56750405-G-A ***
13488842-TTG-GCC 11333166-TTG-GCC ***
13484003-AACAC-TACAA 11328327-AACAC-TACAA ***
9956872-C-G 10119263-C-G ***
13482006-AGTTA-CGT 11326330-AGTTA-CGT ***
9952770-T-C 10115161-T-C ***
58991415-CCT-GCC 56845268-CCT-GCC ***
58855014-C-T 56735857-G-A ***
58868604-C-T 56722267-G-A ***
13110116-C-A 10599602-C-A ***
13419933-A-G 11264257-A-G FGC23709 ***
13468417-C-T 11312741-C-T ***
58862015-A-C 56728856-T-G ***
9931606-TGT-GGA 10093997-TGT-GGA ***
58890307-A-G 56700564-T-C ***
13469368-TG-CT 11313692-TG-CT ***
9952849-A-G 10115240-A-G ***
58845102-C-A 56745769-G-T ***
10049749-C-CA 10212140-C-CA ***
10042905-A-T 10205296-A-T ***
13707329-TG-AC 11551653-TG-AC ***
17950835-T-A 15838955-T-A ***
9740260-T-G 9902651-T-G IR3_Prx ***
7317594-T-C 7449553-T-C ***
7504444-T-C 7636403-T-C IR1_L ***
7793001-A-C 7924960-A-C ***
8407444-A-G 8539403-A-G ***
8723707-T-C 8855666-T-C ***
9300270-C-A 9462661-C-A ***
9668510-A-C 9830901-A-C IR3_Prx ***
9782972-A-C 9945363-A-C ***
7173790-A-G 7305749-A-G ***
9909005-G-A 10071396-G-A ***
9919397-A-T 10081788-A-T ***
9920461-T-G 10082852-T-G ***
9974049-C-T 10136440-C-T ***
10032960-A-G 10195351-A-G ***
10044358-G-A 10206749-G-A ***
10066300-G-T 10228691-G-T ***
7317589-A-C 7449548-A-C ***
6508710-T-G 6640669-T-G ***
10067227-T-G 10229618-T-G ***
5477175-C-T 5609134-C-T ***
5089292-G-T 5221251-G-T ***
5351295-T-A 5483254-T-A ***
5436881-T-C 5568840-T-C ***
5436893-A-C 5568852-A-C ***
5476442-A-G 5608401-A-G ***
5476466-A-G 5608425-A-G ***
5476471-C-G 5608430-C-G ***
5477917-A-G 5609876-A-G ***
6295755-A-C 6427714-A-C IR3_Dst ***
5479547-C-A 5611506-C-A ***
5479570-G-A 5611529-G-A ***
5794915-C-G 5926874-C-G ***
6173304-T-C 6305263-T-C IR3_Dst ***
6183171-G-C 6315130-G-C IR3_Dst ***
6216152-T-A 6348111-T-A IR3_Dst ***
6295665-A-C 6427624-A-C IR3_Dst ***
6295666-C-A 6427625-C-A IR3_Dst ***
10067207-A-T 10229598-A-T ***
10067273-A-G 10229664-A-G ***
4354381-A-C 4486340-A-C ***
16792142-G-T 14680262-G-T ***
14986481-A-G 12874549-A-G ***
20084460-C-T 17972580-C-T P5_Dst ***
15641474-A-T 13529594-A-T ***
15882103-T-C 13770223-T-C ***
16228018-A-T 14116138-A-T ***
16785920-T-G 14674040-T-G ***
16786550-G-T 14674670-G-T ***
16947545-T-G 14835665-T-G ***
14704048-A-G 12592114-A-G ***
17323764-A-G 15211884-A-G ***
17323774-G-A 15211894-G-A ***
17432075-G-T 15320195-G-T ***
17432076-A-T 15320196-A-T ***
17432081-A-T 15320201-A-T ***
17543748-T-G 15431868-T-G ***
17543782-C-G 15431902-C-G ***
14986466-C-T 12874534-C-T FT216 ***
14630479-T-C 12518548-T-C ***
10095071-T-A 10257462-T-A ***
13223282-A-G 11067606-A-G ***
10095106-A-G 10257497-A-G ***
13113429-T-C 10602915-T-C ***
13113493-T-C 10602979-T-C ***
13129382-T-A 10618868-T-A ***
13132048-G-A 10621534-G-A ***
13222093-A-G 11066417-A-G ***
13222626-G-C 11066950-G-C ***
13223469-G-A 11067793-G-A ***
13879838-A-G 11759132-A-G ***
13454903-A-G 11299227-A-G ***
13699328-T-A 11543652-T-A ***
13728325-G-T 11572649-G-T ***
13728326-A-C 11572650-A-C ***
13728381-A-G 11572705-A-G ***
13731686-T-A 11576010-T-A ***
13813678-A-G 11692972-A-G ***
13843854-C-A 11723148-C-A ***
5044408-C-G 5176367-C-G ***
4319135-G-C 4451094-G-C ***
13804794-CTCGTAT-ATCAAAG 11684088-CTCGTAT-ATCAAAG ***
13854317-CC-TG 11733611-CC-TG ***
13837420-TC-CT 11716714-TC-CT ***
13861967-T-A 11741261-T-A ***
13728370-G-T 11572694-G-T ***
10064169-T-A 10226560-T-A A13072 ***
9946313-C-T 10108704-C-T ***
9946318-G-T 10108709-G-T ***
10031693-AGA-GGG 10194084-AGA-GGG ***
58899876-CTCC-TTCA 56690992-GGAG-TGAA ***
13446527-CTCCATTCCATTCCATTCCATTCCATTCCAT-C 11290851-CTCCATTCCATTCCATTCCATTCCATTCCAT-C 16×TCCAT***
27161947-T-A 25015800-T-A P1_g3 ***
22328810-A-C 20166924-A-C DYZ19 ***
22989187-T-G 20827301-T-G ***
23486644-A-T 21324758-A-T A12586 ***
28370013-TAT-GAG 26223866-TAT-GAG P1_gr2 ***
13659351-TGAAT-GGAAA 11503675-TGAAT-GGAAA ***
9950643-T-C 10113034-T-C ***
22327544-C-T 20165658-C-T DYZ19 ***
13851710-TTGA-AGAT 11731004-TTGA-AGAT ***
59031513-CC-GG 56885366-CC-GG ***
9915617-T-A 10078008-T-A ***
9921538-GATAGCAA-AAGAGAAC 10083929-GATAGCAA-AAGAGAAC ***
13833059-CTGAA-ATCAT 11712353-CTGAA-ATCAT ***
22503322-G-A 20341436-G-A DYZ19 ***
13728363-C-A 11572687-C-A ***
22481005-C-A 20319119-C-A DYZ19 ***
9924556-G-A 10086947-G-A ***
9915610-T-A 10078001-T-A ***
9915640-C-T 10078031-C-T ***
10067434-ACCA-GCCG 10229825-ACCA-GCCG ***
9915625-TGGAG-GGGAT 10078016-TGGAG-GGGAT ***
10067111-AATACAGT-GAGG 10229502-AATACAGT-GAGG ***
10068919-C-G 10231310-C-G ***
9957802-T-C 10120193-T-C ***
9956705-GA-CT 10119096-GA-CT ***
13851695-ACAAATG-TCGAATT 11730989-ACAAATG-TCGAATT ***
13857513-CC-AT 11736807-CC-AT ***
10067405-AAGT-GTGC 10229796-AAGT-GTGC ***
9950671-T-C 10113062-T-C ***
22488380-GAGT-CAGG 20326494-GAGT-CAGG DYZ19 ***
4275251-T-C 4407210-T-C ***
2810475-A-C 2942434-A-C ***
22311666-G-A 20149780-G-A DYZ19 ***
2685704-T-C 2817663-T-C ***
2685713-A-G 2817672-A-G ***
2817774-T-C 2949733-T-C ***
22311668-G-A 20149782-G-A DYZ19 ***
3809136-A-T 3941095-A-T 31×T***
3817132-A-G 3949091-A-G ***
3909091-C-A 4041050-C-A ***
3964608-T-G 4096567-T-G ***
3964774-A-C 4096733-A-C ***
4031743-C-T 4163702-C-T ***
4058594-T-A 4190553-T-A ***
4077515-T-C 4209474-T-C ***
4763525-A-G 4895484-A-G ***
9919389-C-T 10081780-C-T FGC29133 ***
22365824-G-C 20203938-G-C DYZ19 ***
9920264-C-A 10082655-C-A Z4879 ***
10043362-C-T 10205753-C-T ***
10043360-A-T 10205751-A-T ***
10042333-A-G 10204724-A-G ***
13110126-C-A 10599612-C-A ***
10042862-C-T 10205253-C-T ***
10042847-C-T 10205238-C-T ***
10042352-T-A 10204743-T-A ***
9916031-T-G 10078422-T-G ***
10044751-T-C 10207142-T-C ***
10068929-A-G 10231320-A-G ***
18414441-G-A 16302561-G-A BY211777 P6_Gap ***
10067444-A-G 10229835-A-G ***
10067489-G-C 10229880-G-C ***
10042630-T-C 10205021-T-C ***
10067437-A-G 10229828-A-G ***
10043540-A-G 10205931-A-G ***
9916009-G-A 10078400-G-A ***
58907275-ATT-TTC 56683594-AAT-GAA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.




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