Corder
BigY2: 181672, FTDNA: 181672Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 181672 | FTDNA 181672 |
---|---|---|---|---|---|---|---|---|---|
23177684-G-A | 21015798-G-A | Y | A* | *** | |||||
20041961-C-T | 17930081-C-T | P5_Prx | 13×T | A* | |||||
22290452-G-A | 20128566-G-A | DYZ19 | A* | ||||||
22433889-G-A | 20272003-G-A | DYZ19 | A* | ||||||
7677663-T-C | 7809622-T-C | BY66777 | Y | Y | + | + | |||
15066721-C-T | 12954812-C-T | BY99538 | Y | Y | + | + | |||
15066727-G-T | 12954818-G-T | BY99541 | Y | Y | + | + | |||
15066728-ACC-A | 12954819-ACC-A | + | + | ||||||
15859138-C-G | 13747258-C-G | BY104563 | Y | Y | + | + | |||
16647280-G-A | 14535400-G-A | BY109217 | Y | Y | + | + | |||
18149661-C-A | 16037781-C-A | BY120435 | Y | Y | + | + | |||
21785555-C-A | 19623669-C-A | BY135471 | Y | Y | + | + | |||
21905072-G-T | 19743186-G-T | BY136367 | Y | Y | + | + | |||
22633051-A-T | 20471165-A-T | BY139663 | Y | + | + | ||||
23147276-A-G | 20985390-A-G | BY143350 | Y | Y | + | + | |||
23204012-C-T | 21042126-C-T | BY143792 | Y | + | + | ||||
15066723-T-G | 12954814-T-G | BY99539 | Y | Y | + | ||||
15066725-A-G | 12954816-A-G | BY99540 | Y | Y | + | ||||
22136920-C-A | 19975034-C-A | BY55336 | Y | Y | + | ||||
22255245-T-A | 20093359-T-A | DYZ19 | * | *** | |||||
20212115-A-G | 18050229-A-G | PR3137 | P5_Dst | ** | |||||
7359768-AAT-A | 7491727-AAT-A | 10×AT | ** | ||||||
23045487-AC-A | 20883601-AC-A | ** | |||||||
16583342-G-A | 14471462-G-A | ** | |||||||
24472448-A-T | 22326301-A-T | ** | |||||||
5785682-AG-A | 5917641-AG-A | ** | |||||||
59000025-G-A | 56853878-G-A | ** | |||||||
22703594-T-A | 20541708-T-A | ** | |||||||
9351151-C-T | 9513542-C-T | 21×AT | ** | ||||||
19377094-C-A | 17265214-C-A | ** | |||||||
5241254-G-T | 5373213-G-T | ** | |||||||
10004868-C-CGT | 10167259-C-CGT | 8×GT | ** | ||||||
14238412-C-A | 12117706-C-A | 12×A | ** | ||||||
17527327-C-CAT | 15415447-C-CAT | 8×AT | ** | ||||||
23807424-CA-C | 21645538-CA-C | ** | |||||||
58977263-C-T | 56831116-C-T | ** | |||||||
15081270-C-A | 12969360-C-A | ** | |||||||
26100546-G-T | 23954399-G-T | P1_Y1 | ** | ||||||
15969945-G-A | 13858065-G-A | ** | |||||||
10770466-A-T | ** | ||||||||
10770485-C-T | ** | ||||||||
14558626-C-A | 12446827-C-A | ** | |||||||
22165199-T-A | 20003313-T-A | ** | |||||||
16602633-C-T | 14490753-C-T | ** | |||||||
11671808-N-C | DYZ17 | ** | |||||||
11671818-N-G | DYZ17 | ** | |||||||
10935626-C-A | ** | ||||||||
23034451-C-T | 20872565-C-T | ** | |||||||
23034372-G-C | 20872486-G-C | ** | |||||||
23034391-C-A | 20872505-C-A | ** | |||||||
23034457-AT-A | 20872571-AT-A | ** | |||||||
20869230-T-TC | 18707344-T-TC | P4_Dst | ** | ||||||
19377213-G-A | 17265333-G-A | ** | |||||||
2774702-G-T | 2906661-G-T | ** | |||||||
18395919-C-A | 16284039-C-A | P6_Gap | ** | ||||||
9732916-T-A | 9895307-T-A | IR3_Prx | ** | ||||||
9732928-C-A | 9895319-C-A | IR3_Prx | ** | ||||||
21602711-C-A | 19440825-C-A | ** | |||||||
18263880-AAAG-A | 16152000-AAAG-A | ** | |||||||
4222665-C-A | 4354624-C-A | ** | |||||||
17923632-G-A | 15811752-G-A | ** | |||||||
20557621-CTGTGTG-C | 18395735-CTGTGTG-C | P5_Dst | 19×TG | ** | |||||
10988884-G-T | ** | ||||||||
21155229-C-A | 18993343-C-A | ** | |||||||
16968147-T-A | 14856267-T-A | ** | |||||||
13922551-C-A | 11801845-C-A | ** | |||||||
22703593-C-A | 20541707-C-A | ** | |||||||
22996046-A-T | 20834160-A-T | ** | |||||||
10967557-A-T | ** | ||||||||
16968150-C-A | 14856270-C-A | 26×A | ** | ||||||
8698811-C-A | 8830770-C-A | ** | |||||||
5472075-G-T | 5604034-G-T | ** | |||||||
19042615-T-C | 16930735-T-C | ** | |||||||
24910920-G-T | 22764773-G-T | g1 | ** | ||||||
6226116-A-T | 6358075-A-T | IR3_Dst | ** | ||||||
18959210-G-C | 16847330-G-C | ** | |||||||
28234443-A-T | 26088296-A-T | P1_b4 | ** | ||||||
11007268-C-A | ** | ||||||||
10986389-C-CAGTGTACTCA | ** | ||||||||
10986420-A-C | ** | ||||||||
19463751-T-C | 17351871-T-C | ** | |||||||
14701181-C-A | 12589247-C-A | ** | |||||||
28778969-A-T | 26632822-A-T | ** | |||||||
3990663-T-A | 4122622-T-A | ** | |||||||
21367690-ATT-A | 19205804-ATT-A | 14×T | ** | ||||||
6403599-G-A | 6535558-G-A | ** | |||||||
16743076-T-A | 14631196-T-A | ** | |||||||
5534803-C-A | 5666762-C-A | ** | |||||||
13460470-G-T | 11304794-G-T | ** | |||||||
19732413-C-CT | 17620533-C-CT | P5_Prx | ** | ||||||
10760471-A-T | ** | ||||||||
22816358-C-A | 20654472-C-A | ** | |||||||
10884416-A-C | ** | ||||||||
3389247-C-A | 3521206-C-A | ** | |||||||
27861875-CAAAAAAAA-C | 25715728-CAAAAAAAA-C | P1_Y2 | 32×A | ** | |||||
13236666-C-A | 11080990-C-A | ** | |||||||
10895759-T-C | ** | ||||||||
10655066-C-CTCCAT | ** | ||||||||
27540971-AC-A | 25394824-AC-A | P1_Y2 | ** | ||||||
14784915-C-A | 12672985-C-A | ** | |||||||
15873446-C-A | 13761566-C-A | ** | |||||||
10847531-A-G | ** | ||||||||
10847532-A-T | ** | ||||||||
10847534-C-T | FT202818 | ** | |||||||
10866042-C-A | ** | ||||||||
5393362-CGGAGGA-C | 5525321-CGGAGGA-C | 10×GGA | ** | ||||||
5185424-C-A | 5317383-C-A | ** | |||||||
3550689-C-A | 3682648-C-A | ** | |||||||
2718977-C-T | 2850936-C-T | ** | |||||||
4222608-C-A | 4354567-C-A | ** | |||||||
27540976-C-A | 25394829-C-A | P1_Y2 | 12×A | ** | |||||
21388668-T-TC | 19226782-T-TC | ** | |||||||
19043757-C-A | 16931877-C-A | ** | |||||||
24472421-G-GTTT | 22326274-G-GTTT | 25×T | ** | ||||||
22165184-C-A | 20003298-C-A | ** | |||||||
23807449-G-A | 21645563-G-A | ** | |||||||
10672014-C-A | ** | ||||||||
14754097-G-A | 12642166-G-A | ** | |||||||
17030605-G-TT | 14918725-G-TT | ** | |||||||
8568488-G-TT | 8700447-G-TT | ** | |||||||
23034377-G-A | 20872491-G-A | A19700 | ** | ||||||
23034435-C-T | 20872549-C-T | ** | |||||||
17923457-C-A | 15811577-C-A | ** | |||||||
15556680-C-A | 13444800-C-A | ** | |||||||
3164601-C-A | 3296560-C-A | ** | |||||||
7160625-C-T | 7292584-C-T | ** | |||||||
9806769-C-T | 9969160-C-T | ** | |||||||
10657503-A-G | ** | ||||||||
17090792-A-G | 14978912-A-G | ** | |||||||
7939295-C-A | 8071254-C-A | ** | |||||||
28605974-T-C | 26459827-T-C | ** | |||||||
7269676-G-T | 7401635-G-T | ** | |||||||
17030984-G-A | 14919104-G-A | ** | |||||||
11018192-C-A | ** | ||||||||
13237556-C-A | 11081880-C-A | ** | |||||||
9996417-C-A | 10158808-C-A | ** | |||||||
4687832-C-A | 4819791-C-A | ** | |||||||
23034383-C-T | 20872497-C-T | ** | |||||||
23034394-C-G | 20872508-C-G | ** | |||||||
15824048-G-A | 13712168-G-A | ** | |||||||
14537645-C-A | 12425846-C-A | ** | |||||||
2718933-G-A | 2850892-G-A | ** | |||||||
2718947-G-T | 2850906-G-T | ** | |||||||
17548663-C-A | 15436783-C-A | ** | |||||||
21148541-T-A | 18986655-T-A | ** | |||||||
7757069-C-A | 7889028-C-A | ** | |||||||
21139347-C-A | 18977461-C-A | ** | |||||||
56837239-C-A | ** | ||||||||
5188528-G-C | 5320487-G-C | ** | |||||||
17527436-GTGTA-G | 15415556-GTGTA-G | ** | |||||||
10761117-C-T | ** | ||||||||
10873829-C-A | ** | ||||||||
10759987-T-A | ** | ||||||||
10786023-A-C | ** | ||||||||
15556891-C-A | 13445011-C-A | ** | |||||||
16028272-C-A | 13916392-C-A | ** | |||||||
10770492-C-A | ** | ||||||||
19399953-C-A | 17288073-C-A | ** | |||||||
19517298-C-A | 17405418-C-A | ** | |||||||
8901988-TTTC-T | 9033947-TTTC-T | ** | |||||||
24614197-AGC-A | 22468050-AGC-A | P3_t2 | ** | ||||||
5267526-A-T | 5399485-A-T | ** | |||||||
2975543-C-A | 3107502-C-A | ** | |||||||
21555557-C-A | 19393671-C-A | ** | |||||||
11001693-C-A | ** | ||||||||
3854083-C-A | 3986042-C-A | ** | |||||||
22816341-T-C | 20654455-T-C | ** | |||||||
21853721-G-A | 19691835-G-A | ** | |||||||
21262526-C-A | 19100640-C-A | ** | |||||||
6977087-C-A | 7109046-C-A | ** | |||||||
23848323-G-T | 21686437-G-T | ** | |||||||
9930569-C-A | 10092960-C-A | ** | |||||||
11656736-C-T | FT383826 | DYZ17 | ** | ||||||
7164295-G-A | 7296254-G-A | ** | |||||||
17576149-A-G | 15464269-A-G | ** | |||||||
24391920-C-A | 22245773-C-A | ** | |||||||
11675786-C-A | DYZ17 | ** | |||||||
15870546-C-A | 13758666-C-A | ** | |||||||
56837327-C-A | ** | ||||||||
4208934-C-A | 4340893-C-A | ** | |||||||
3961064-C-A | 4093023-C-A | ** | |||||||
16016426-C-A | 13904546-C-A | ** | |||||||
10925476-C-G | ** | ||||||||
23807436-C-A | 21645550-C-A | ** | |||||||
14700919-C-A | 12588985-C-A | ** | |||||||
10885943-G-A | ** | ||||||||
13937382-C-A | 11816676-C-A | ** | |||||||
21602805-G-T | 19440919-G-T | ** | |||||||
2718987-C-T | 2850946-C-T | ** | |||||||
9967170-C-A | 10129561-C-A | ** | |||||||
5873532-C-A | 6005491-C-A | ** | |||||||
25966259-T-A | 23820112-T-A | P1_Y1 | ** | ||||||
15435130-G-C | 13323250-G-C | ** | |||||||
10825173-C-A | ** | ||||||||
10759988-T-A | ** | ||||||||
7142742-C-A | 7274701-C-A | ** | |||||||
5842109-G-T | 5974068-G-T | ** | |||||||
9887181-G-T | 10049572-G-T | ** | |||||||
10940386-C-CACTAA | ** | ||||||||
10940391-C-G | ** | ||||||||
22167305-C-A | 20005419-C-A | ** | |||||||
14799850-C-A | 12687921-C-A | ** | |||||||
6148028-C-A | 6279987-C-A | IR3_Dst | ** | ||||||
23807472-C-T | 21645586-C-T | ** | |||||||
5081115-C-A | 5213074-C-A | ** | |||||||
19206723-T-A | 17094843-T-A | ** | |||||||
16002321-C-A | 13890441-C-A | ** | |||||||
15565967-A-C | 13454087-A-C | ** | |||||||
15871730-A-G | 13759850-A-G | ** | |||||||
17946946-GAC-G | 15835066-GAC-G | ** | |||||||
14301665-G-T | 12180959-G-T | ** | |||||||
5336826-G-T | 5468785-G-T | ** | |||||||
22309944-G-A | 20148058-G-A | DYZ19 | ** | ||||||
21087162-C-A | 18925276-C-A | ** | |||||||
7319186-C-A | 7451145-C-A | ** | |||||||
7306754-C-A | 7438713-C-A | ** | |||||||
19465048-C-A | 17353168-C-A | ** | |||||||
9047666-A-G | 9210057-A-G | ** | |||||||
56839245-G-T | ** | ||||||||
13295061-C-A | 11139385-C-A | ** | |||||||
23609425-C-T | 21447539-C-T | ** | |||||||
2673607-C-CT | 2805566-C-CT | 10×T | ** | ||||||
7218240-G-T | 7350199-G-T | ** | |||||||
10954528-C-A | ** | ||||||||
15449917-A-T | 13338037-A-T | ** | |||||||
9426814-C-A | 9589205-C-A | ** | |||||||
19298331-C-A | 17186451-C-A | ** | |||||||
23034353-G-T | 20872467-G-T | ** | |||||||
5782429-C-A | 5914388-C-A | ** | |||||||
7082665-C-A | 7214624-C-A | ** | |||||||
17537861-C-A | 15425981-C-A | ** | |||||||
10992235-C-A | ** | ||||||||
13870769-C-A | 11750063-C-A | FT168244 | ** | ||||||
16743071-T-C | 14631191-T-C | ** | |||||||
7160636-A-G | 7292595-A-G | ** | |||||||
14985228-G-T | 12873296-G-T | ** | |||||||
2719033-C-T | 2850992-C-T | ** | |||||||
11027361-C-A | ** | ||||||||
2774863-C-A | 2906822-C-A | ** | |||||||
20824950-C-A | 18663064-C-A | P4_Gap | ** | ||||||
21560580-C-A | 19398694-C-A | ** | |||||||
23522532-C-A | 21360646-C-A | ** | |||||||
2683406-A-G | 2815365-A-G | ** | |||||||
2697357-C-T | 2829316-C-T | ** | |||||||
2718938-G-A | 2850897-G-A | ** | |||||||
2718956-C-T | 2850915-C-T | ** | |||||||
2718964-A-C | 2850923-A-C | ** | |||||||
2718983-C-T | 2850942-C-T | ** | |||||||
2719047-GC-A | 2851006-GC-A | ** | |||||||
2738772-T-TC | 2870731-T-TC | ** | |||||||
2907144-A-C | 3039103-A-C | ** | |||||||
3019725-G-T | 3151684-G-T | FT27461 | ** | ||||||
3100881-C-A | 3232840-C-A | ** | |||||||
3105016-T-C | 3236975-T-C | ** | |||||||
3134906-G-T | 3266865-G-T | ** | |||||||
3218644-A-T | 3350603-A-T | ** | |||||||
3252004-A-T | 3383963-A-T | ** | |||||||
3332108-G-T | 3464067-G-T | ** | |||||||
3389237-A-G | 3521196-A-G | ** | |||||||
3438639-A-T | 3570598-A-T | ** | |||||||
3649669-T-A | 3781628-T-A | ** | |||||||
3837031-C-A | 3968990-C-A | ** | |||||||
3847807-C-A | 3979766-C-A | ** | |||||||
3849123-C-A | 3981082-C-A | ** | |||||||
3851541-G-T | 3983500-G-T | ** | |||||||
3881180-T-C | 4013139-T-C | ** | |||||||
3889973-A-T | 4021932-A-T | ** | |||||||
3890021-C-A | 4021980-C-A | ** | |||||||
3920438-C-A | 4052397-C-A | ** | |||||||
3990810-T-G | 4122769-T-G | ** | |||||||
4018374-C-A | 4150333-C-A | ** | |||||||
4114844-G-A | 4246803-G-A | ** | |||||||
4148054-T-G | 4280013-T-G | ** | |||||||
4376836-G-A | 4508795-G-A | ** | |||||||
4456135-C-A | 4588094-C-A | ** | |||||||
4580674-C-A | 4712633-C-A | ** | |||||||
4616595-C-T | 4748554-C-T | ** | |||||||
4729322-C-T | 4861281-C-T | ** | |||||||
4729345-A-T | 4861304-A-T | ** | |||||||
4837876-C-A | 4969835-C-A | ** | |||||||
5021990-G-A | 5153949-G-A | ** | |||||||
5188551-A-T | 5320510-A-T | ** | |||||||
5208951-T-C | 5340910-T-C | ** | |||||||
5313437-A-T | 5445396-A-T | 5×CCT | ** | ||||||
5320893-C-A | 5452852-C-A | ** | |||||||
5665238-A-T | 5797197-A-T | ** | |||||||
5703924-A-G | 5835883-A-G | ** | |||||||
5704016-A-T | 5835975-A-T | ** | |||||||
5704021-A-G | 5835980-A-G | ** | |||||||
5842089-C-G | 5974048-C-G | ** | |||||||
5906008-G-T | 6037967-G-T | Y132147 | FT66832 | ** | |||||
5999512-A-T | 6131471-A-T | ** | |||||||
6096451-A-T | 6228410-A-T | ** | |||||||
6096460-G-T | 6228419-G-T | ** | |||||||
6125989-T-C | 6257948-T-C | ** | |||||||
6125990-G-A | 6257949-G-A | ** | |||||||
6226108-A-T | 6358067-A-T | IR3_Dst | ** | ||||||
6226155-G-T | 6358114-G-T | IR3_Dst | ** | ||||||
6582428-T-C | 6714387-T-C | FT293273 | ** | ||||||
6664450-A-G | 6796409-A-G | ** | |||||||
6774103-G-A | 6906062-G-A | ** | |||||||
6888495-G-T | 7020454-G-T | ** | |||||||
6916096-G-T | 7048055-G-T | ** | |||||||
7033484-G-A | 7165443-G-A | ** | |||||||
7110551-A-T | 7242510-A-T | ** | |||||||
7110611-C-A | 7242570-C-A | ** | |||||||
7140410-C-A | 7272369-C-A | ** | |||||||
7160608-A-G | 7292567-A-G | ** | |||||||
7160610-A-T | 7292569-A-T | ** | |||||||
7160615-C-T | 7292574-C-T | ** | |||||||
7160616-A-T | 7292575-A-T | ** | |||||||
7162255-T-A | 7294214-T-A | ** | |||||||
7164299-C-G | 7296258-C-G | ** | |||||||
7164313-A-G | 7296272-A-G | ** | |||||||
7281744-C-A | 7413703-C-A | ** | |||||||
7299660-GC-G | 7431619-GC-G | ** | |||||||
7305574-C-A | 7437533-C-A | ** | |||||||
7306392-G-A | 7438351-G-A | ** | |||||||
7437370-G-A | 7569329-G-A | ** | |||||||
7437427-C-T | 7569386-C-T | ** | |||||||
7536512-G-T | 7668471-G-T | ** | |||||||
7649061-C-A | 7781020-C-A | ** | |||||||
7706293-C-A | 7838252-C-A | ** | |||||||
7723735-A-G | 7855694-A-G | ** | |||||||
7821334-C-T | 7953293-C-T | ** | |||||||
7828936-A-G | 7960895-A-G | ** | |||||||
7829550-C-A | 7961509-C-A | ** | |||||||
7939694-C-A | 8071653-C-A | ** | |||||||
8178836-G-T | 8310795-G-T | ** | |||||||
8321575-C-A | 8453534-C-A | ** | |||||||
8343952-A-C | 8475911-A-C | ** | |||||||
8697602-A-G | 8829561-A-G | ** | |||||||
8736620-C-A | 8868579-C-A | ** | |||||||
9111232-C-A | ** | ||||||||
9074095-C-A | 9236486-C-A | ** | |||||||
9511382-T-A | 9673773-T-A | ** | |||||||
9887151-T-C | 10049542-T-C | ** | |||||||
9967203-C-T | 10129594-C-T | ** | |||||||
9996432-A-T | 10158823-A-T | ** | |||||||
10003663-C-A | 10166054-C-A | ** | |||||||
10645856-T-G | ** | ||||||||
10653059-A-T | ** | ||||||||
10657548-C-A | ** | ||||||||
10663697-CATTCC-A | ** | ||||||||
10685929-A-G | ** | ||||||||
10685939-A-G | ** | ||||||||
10744576-A-T | FT429278 | ** | |||||||
10749551-C-T | ** | ||||||||
10759568-C-A | ** | ||||||||
10761972-C-A | ** | ||||||||
10768051-A-C | ** | ||||||||
10772122-A-G | ** | ||||||||
10775929-C-T | ** | ||||||||
10778157-C-A | ** | ||||||||
10781873-G-T | ** | ||||||||
10795699-C-T | ** | ||||||||
10803882-A-G | ** | ||||||||
10820994-C-A | ** | ||||||||
10822256-C-A | ** | ||||||||
10827144-C-A | ** | ||||||||
10827669-C-T | ** | ||||||||
10840788-A-G | ** | ||||||||
10859873-T-A | ** | ||||||||
10866061-C-CATTTT | ** | ||||||||
10866063-A-T | ** | ||||||||
10866093-ATTCCTCTCC-A | ** | ||||||||
10866105-TC-T | ** | ||||||||
10868954-A-T | ** | ||||||||
10895637-T-C | ** | ||||||||
10906810-G-A | ** | ||||||||
10925480-A-G | ** | ||||||||
10930616-C-A | ** | ||||||||
10934040-C-A | ** | ||||||||
10944509-C-A | ** | ||||||||
10954397-A-G | ** | ||||||||
10967559-A-G | ** | ||||||||
10987304-C-A | ** | ||||||||
10988861-A-T | ** | ||||||||
10990425-C-A | ** | ||||||||
10991384-A-G | ** | ||||||||
11007096-C-T | ** | ||||||||
11034006-A-G | ** | ||||||||
13197799-A-T | 11042123-A-T | ** | |||||||
13197878-T-C | 11042202-T-C | FTB5651 | ** | ||||||
13217968-A-G | 11062292-A-G | ** | |||||||
13327830-C-A | 11172154-C-A | ** | |||||||
13361474-C-T | 11205798-C-T | ** | |||||||
13394830-G-A | 11239154-G-A | ** | |||||||
13502063-C-A | 11346387-C-A | ** | |||||||
13509303-C-A | 11353627-C-A | ** | |||||||
13546557-G-T | 11390881-G-T | ** | |||||||
13558195-G-A | 11402519-G-A | ** | |||||||
13587702-T-A | 11432026-T-A | ** | |||||||
13598566-C-A | 11442890-C-A | ** | |||||||
13605056-C-A | 11449380-C-A | ** | |||||||
13624907-C-A | 11469231-C-A | ** | |||||||
11643849-G-T | DYZ17 | ** | |||||||
11656737-G-T | DYZ17 | ** | |||||||
11664004-NNN-A | DYZ17 | ** | |||||||
11671583-T-A | DYZ17 | ** | |||||||
13900110-A-T | 11779404-A-T | ** | |||||||
13911105-C-A | 11790399-C-A | ** | |||||||
13911170-C-A | 11790464-C-A | ** | |||||||
13981667-A-G | 11860961-A-G | ** | |||||||
14128199-T-C | 12007493-T-C | ** | |||||||
14128201-G-T | 12007495-G-T | ** | |||||||
14128204-AT-A | 12007498-AT-A | ** | |||||||
14239351-C-A | 12118645-C-A | ** | |||||||
14324659-C-A | 12203953-C-A | ** | |||||||
14347941-C-A | 12227236-C-A | ** | |||||||
14362011-C-A | 12241306-C-A | ** | |||||||
14380868-A-G | 12260164-A-G | ** | |||||||
14452220-C-A | 12331493-C-A | ** | |||||||
14502000-G-A | 12390205-G-A | ** | |||||||
14529242-A-AG | 12417443-A-AG | ** | |||||||
14530365-C-A | 12418566-C-A | ** | |||||||
14537979-G-A | 12426180-G-A | ** | |||||||
14564061-C-A | 12452261-C-A | ** | |||||||
14854274-C-A | 12742340-C-A | ** | |||||||
14916833-G-A | 12804900-G-A | ** | |||||||
14992659-C-A | 12880744-C-A | ** | |||||||
15109804-A-G | 12997891-A-G | ** | |||||||
15113715-T-C | 13001802-T-C | ** | |||||||
15290101-T-C | 13178200-T-C | ** | |||||||
15364842-C-A | 13252962-C-A | ** | |||||||
15435150-C-A | 13323270-C-A | ** | |||||||
15468647-C-A | 13356767-C-A | ** | |||||||
15671132-T-A | 13559252-T-A | ** | |||||||
15717794-C-A | 13605914-C-A | ** | |||||||
15794770-G-T | 13682890-G-T | ** | |||||||
15841741-C-A | 13729861-C-A | ** | |||||||
15871723-G-C | 13759843-G-C | ** | |||||||
15871749-CA-C | 13759869-CA-C | ** | |||||||
15871754-C-CGT | 13759874-C-CGT | ** | |||||||
15871764-T-C | 13759884-T-C | ** | |||||||
15871770-ATTTT-A | 13759890-ATTTT-A | 8×T | ** | ||||||
15943758-C-A | 13831878-C-A | ** | |||||||
16002584-C-A | 13890704-C-A | ** | |||||||
16005062-C-A | 13893182-C-A | ** | |||||||
16016260-A-T | 13904380-A-T | ** | |||||||
16044881-A-G | 13933001-A-G | ** | |||||||
16181279-G-A | 14069399-G-A | ** | |||||||
16220720-C-A | 14108840-C-A | ** | |||||||
16240899-G-T | 14129019-G-T | ** | |||||||
16320499-G-T | 14208619-G-T | ** | |||||||
16458319-A-C | 14346439-A-C | ** | |||||||
16484155-A-T | 14372275-A-T | ** | |||||||
16553857-C-A | 14441977-C-A | ** | |||||||
16583318-G-T | 14471438-G-T | ** | |||||||
16619971-TGCATCCTAA-T | 14508091-TGCATCCTAA-T | ** | |||||||
16625857-T-G | 14513977-T-G | ** | |||||||
16704551-G-T | 14592671-G-T | ** | |||||||
16896211-C-A | 14784331-C-A | ** | |||||||
16938649-C-A | 14826769-C-A | ** | |||||||
16952533-TC-T | 14840653-TC-T | ** | |||||||
17014472-T-C | 14902592-T-C | ** | |||||||
17014492-A-T | 14902612-A-T | ** | |||||||
17032661-G-A | 14920781-G-A | ** | |||||||
17052833-G-A | 14940953-G-A | ** | |||||||
17243883-C-A | 15132003-C-A | ** | |||||||
17270642-G-T | 15158762-G-T | ** | |||||||
17491068-C-A | 15379188-C-A | ** | |||||||
17723002-C-A | 15611122-C-A | ** | |||||||
17770542-T-C | 15658662-T-C | ** | |||||||
17859393-G-A | 15747513-G-A | ** | |||||||
17886509-T-C | 15774629-T-C | ** | |||||||
17903560-T-C | 15791680-T-C | ** | |||||||
17997265-G-A | 15885385-G-A | P7_Gap | ** | ||||||
18059823-C-A | 15947943-C-A | ** | |||||||
18071497-C-A | 15959617-C-A | ** | |||||||
18088485-C-A | 15976605-C-A | ** | |||||||
18101879-T-C | 15989999-T-C | ** | |||||||
18194211-T-C | 16082331-T-C | ** | |||||||
18210920-CT-C | 16099040-CT-C | ** | |||||||
18212550-C-A | 16100670-C-A | ** | |||||||
18241876-C-A | 16129996-C-A | ** | |||||||
18547149-A-G | 16435269-A-G | ** | |||||||
18565782-T-C | 16453902-T-C | ** | |||||||
18593336-C-A | 16481456-C-A | ** | |||||||
18892327-C-G | 16780447-C-G | ** | |||||||
18901189-C-T | 16789309-C-T | ** | |||||||
18904902-T-A | 16793022-T-A | ** | |||||||
18930704-A-G | 16818824-A-G | FT68574 | ** | ||||||
18948267-C-A | 16836387-C-A | ** | |||||||
18994551-C-T | 16882671-C-T | ** | |||||||
19007669-TA-T | 16895789-TA-T | ** | |||||||
19007730-G-T | 16895850-G-T | ** | |||||||
19042617-G-A | 16930737-G-A | ** | |||||||
19071688-G-C | 16959808-G-C | ** | |||||||
19081303-C-A | 16969423-C-A | ** | |||||||
19183852-A-T | 17071972-A-T | ** | |||||||
19187665-T-G | 17075785-T-G | ** | |||||||
19231344-GAG-TT | 17119464-GAG-TT | ** | |||||||
19298377-A-T | 17186497-A-T | ** | |||||||
19340555-C-T | 17228675-C-T | ** | |||||||
19486907-G-C | 17375027-G-C | ** | |||||||
19532836-T-C | 17420956-T-C | ** | |||||||
19532897-T-C | 17421017-T-C | ** | |||||||
19842090-C-A | 17730210-C-A | P5_Prx | ** | ||||||
20869253-A-G | 18707367-A-G | P4_Dst | ** | ||||||
21072340-C-A | 18910454-C-A | ** | |||||||
21132692-T-TA | 18970806-T-TA | ** | |||||||
21148520-T-A | 18986634-T-A | ** | |||||||
21148532-T-A | 18986646-T-A | ** | |||||||
21297472-AT-A | 19135586-AT-A | ** | |||||||
21320123-G-T | 19158237-G-T | ** | |||||||
21382031-A-T | 19220145-A-T | ** | |||||||
21495440-T-C | 19333554-T-C | ** | |||||||
21602766-G-A | 19440880-G-A | ** | |||||||
21602831-A-G | 19440945-A-G | ** | |||||||
21627058-A-G | 19465172-A-G | ** | |||||||
21671421-C-A | 19509535-C-A | ** | |||||||
21738597-G-T | 19576711-G-T | ** | |||||||
21748176-C-A | 19586290-C-A | ** | |||||||
21815236-G-A | 19653350-G-A | ** | |||||||
21815276-A-G | 19653390-A-G | ** | |||||||
21836540-A-T | 19674654-A-T | ** | |||||||
21895502-A-G | 19733616-A-G | ** | |||||||
21935258-C-A | 19773372-C-A | ** | |||||||
22292103-T-C | 20130217-T-C | DYZ19 | ** | ||||||
22292115-T-A | 20130229-T-A | DYZ19 | ** | ||||||
22292169-C-T | 20130283-C-T | DYZ19 | ** | ||||||
22536005-G-A | 20374119-G-A | ** | |||||||
22537363-C-A | 20375477-C-A | ** | |||||||
22768218-A-G | 20606332-A-G | ** | |||||||
22816362-GT-G | 20654476-GT-G | ** | |||||||
22829528-C-A | 20667642-C-A | ** | |||||||
22974124-A-G | 20812238-A-G | ** | |||||||
23004208-A-G | 20842322-A-G | ** | |||||||
23034398-C-G | 20872512-C-G | ** | |||||||
23034422-C-G | 20872536-C-G | ** | |||||||
23050483-A-T | 20888597-A-T | ** | |||||||
23076399-C-A | 20914513-C-A | ** | |||||||
23094019-A-G | 20932133-A-G | ** | |||||||
23231066-G-A | 21069180-G-A | ** | |||||||
23434493-C-A | 21272607-C-A | ** | |||||||
23475452-C-A | 21313566-C-A | ** | |||||||
23609416-G-T | 21447530-G-T | ** | |||||||
23609428-G-A | 21447542-G-A | ** | |||||||
23789896-C-T | 21628010-C-T | ** | |||||||
23807417-A-G | 21645531-A-G | ** | |||||||
23807497-G-A | 21645611-G-A | ** | |||||||
23807500-A-C | 21645614-A-C | ** | |||||||
23807502-C-G | 21645616-C-G | ** | |||||||
23807504-CCA-C | 21645618-CCA-C | ** | |||||||
23807509-G-GA | 21645623-G-GA | ** | |||||||
23807538-G-A | 21645652-G-A | ** | |||||||
23807562-C-CAG | 21645676-C-CAG | ** | |||||||
24125355-T-C | 21979208-T-C | P3_b1 | ** | ||||||
24378477-A-T | 22232330-A-T | ** | |||||||
24904573-A-T | 22758426-A-T | g1 | ** | ||||||
26055569-C-A | 23909422-C-A | P1_Y1 | ** | ||||||
27540917-AACACAC-A | 25394770-AACACAC-A | P1_Y2 | 24×AC | ** | |||||
28068167-G-GAT | 25922020-G-GAT | P1_Y2 | ** | ||||||
28462181-A-T | 26316034-A-T | ** | |||||||
28498866-TAAA-T | 26352719-TAAA-T | 13×A | ** | ||||||
28531446-A-T | 26385299-A-T | ** | |||||||
28559627-A-T | 26413480-A-T | ** | |||||||
28568133-C-A | 26421986-C-A | ** | |||||||
28608359-C-A | 26462212-C-A | ** | |||||||
28614673-C-A | 26468526-C-A | ** | |||||||
28618278-T-C | 26472131-T-C | ** | |||||||
28631472-G-A | 26485325-G-A | ** | |||||||
28633096-G-A | 26486949-G-A | ** | |||||||
28759706-C-A | 26613559-C-A | ** | |||||||
28768853-G-T | 26622706-G-T | ** | |||||||
28798503-A-G | 26652356-A-G | ** | |||||||
56699846-G-GAATTAACCCGAATAC | ** | ||||||||
58862699-A-C | 56728172-T-G | ** | |||||||
56831007-C-A | ** | ||||||||
56847151-T-A | ** | ||||||||
56847208-T-G | ** | ||||||||
56870265-T-G | ** | ||||||||
31236-C-A | ** | ||||||||
22450348-C-G | 20288462-C-G | DYZ19 | *** | ||||||
24959823-G-A | 22813676-G-A | g1 | *** | ||||||
19418520-T-A | 17306640-T-A | *** | |||||||
14986700-G-C | 12874768-G-C | *** | |||||||
13992181-G-A | 11871475-G-A | FT328979 | *** | ||||||
15047550-TTC-T | 12935641-TTC-T | *** | |||||||
23267063-G-T | 21105177-G-T | *** | |||||||
18904499-C-CT | 16792619-C-CT | 10×T | *** | ||||||
58979369-A-C | 56833222-A-C | *** | |||||||
15379573-T-C | 13267693-T-C | *** | |||||||
10798332-A-T | *** | ||||||||
10798337-A-T | *** | ||||||||
10798347-A-G | *** | ||||||||
10798351-C-A | *** | ||||||||
10798388-T-C | *** | ||||||||
10987291-C-A | *** | ||||||||
10887978-A-AGTGAG | *** | ||||||||
18653677-T-A | 16541797-T-A | *** | |||||||
10988605-C-A | *** | ||||||||
13992175-G-A | 11871469-G-A | *** | |||||||
10973966-CCACT-C,CCCACT | *** | ||||||||
5761356-CA-C | 5893315-CA-C | 10×A | *** | ||||||
10999976-A-C | *** | ||||||||
10988587-T-A | *** | ||||||||
2862892-CAAAA-C | 2994851-CAAAA-C | 18×A | *** | ||||||
10999968-G-C | *** | ||||||||
18923982-AG-A,AA | 16812102-AG-A,AA | *** | |||||||
8881059-CAAA-C | 9013018-CAAA-C | 14×A | *** | ||||||
11642974-G-T | DYZ17 | *** | |||||||
21651809-C-A | 19489923-C-A | *** | |||||||
7146291-G-A | 7278250-G-A | *** | |||||||
26415708-T-A | 24269561-T-A | P1_Y1 | *** | ||||||
22812658-A-T | 20650772-A-T | *** | |||||||
28548571-C-A | 26402424-C-A | *** | |||||||
21362568-C-A | 19200682-C-A | *** | |||||||
13936995-C-A | 11816289-C-A | *** | |||||||
10997044-C-A | *** | ||||||||
56833308-TGCCAT-C,CTCCAC | *** | ||||||||
56833119-TCCACTCCATC-T,TCCCTTCCATT | *** | ||||||||
5393290-A-G | 5525249-A-G | *** | |||||||
11672608-GA-G | DYZ17 | *** | |||||||
11643726-T-A,G | DYZ17 | *** | |||||||
23142013-G-T | 20980127-G-T | *** | |||||||
56830242-CCATTG-C | *** | ||||||||
10988582-C-T | *** | ||||||||
10999971-C-T | *** | ||||||||
2768049-G-T | 2900008-G-T | *** | |||||||
15364057-CT-C | 13252177-CT-C | *** | |||||||
10883931-A-C | *** | ||||||||
10883932-A-C | *** | ||||||||
56838668-G-A | *** | ||||||||
14557897-C-A | 12446098-C-A | *** | |||||||
15070601-C-A | 12958692-C-A | *** | |||||||
2738361-C-A | 2870320-C-A | *** | |||||||
4928995-C-A | 5060954-C-A | *** | |||||||
6428562-C-A | 6560521-C-A | *** | |||||||
6891883-C-T | 7023842-C-T | FT153055 | *** | ||||||
7141932-GC-G | 7273891-GC-G | *** | |||||||
7299653-C-G | 7431612-C-G | *** | |||||||
9462019-G-T | 9624410-G-T | *** | |||||||
10662916-C-A | *** | ||||||||
10977747-C-A | *** | ||||||||
10997080-C-A | *** | ||||||||
10997106-A-G | *** | ||||||||
13328857-T-C | 11173181-T-C | *** | |||||||
13526358-C-A | 11370682-C-A | *** | |||||||
14586345-C-A | 12474545-C-A | *** | |||||||
14587731-G-T | 12475931-G-T | *** | |||||||
15235063-C-A | 13123149-C-A | *** | |||||||
15279042-A-G | 13167141-A-G | *** | |||||||
15332411-C-A | 13220529-C-A | *** | |||||||
15566592-C-A | 13454712-C-A | *** | |||||||
15791050-C-A | 13679170-C-A | *** | |||||||
16701629-G-A | 14589749-G-A | *** | |||||||
19172846-A-T | 17060966-A-T | *** | |||||||
22102527-C-T | 19940641-C-T | *** | |||||||
22176661-C-A | 20014775-C-A | *** | |||||||
24112604-C-T | 21966457-C-T | P3_b1 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.