Mangan
FTDNA: N112446, BigY2: N112446MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA N112446 | BigY2 N112446 |
---|---|---|---|---|---|---|---|---|---|
20212487-G-C | 18050601-G-C | P5_Dst | A+ | ||||||
27793014-A-C | 25646867-A-C | P1_Y2 | A+ | ||||||
20021600-A-G | 17909720-A-G | P5_Prx | *** | A* | |||||
16121458-C-T | 14009578-C-T | P8_Prx | *** | A* | |||||
6167961-T-C | 6299920-T-C | IR3_Dst | *** | A* | |||||
22291523-G-C | 20129637-G-C | DYZ19 | *** | A* | |||||
8776185-C-T | 8908144-C-T | FGC46373 | Y | Y | + | + | |||
19010026-GCAGCTTTGC-G | 16898146-GCAGCTTTGC-G | + | + | ||||||
13666703-A-G | 11511027-A-G | FGC46374 | + | + | |||||
14555733-TAAAC-T | 12443934-TAAAC-T | + | + | ||||||
16703061-T-C | 14591181-T-C | FGC46376 | Y | ** | + | ||||
16984368-G-C | 14872488-G-C | FGC46377 | Y | Y | + | + | |||
17165572-C-T | 15053692-C-T | FGC46378 | Y | Y | + | + | |||
18665877-G-T | 16553997-G-T | BY122960 | Y | Y | + | + | |||
24478386-C-T | 22332239-C-T | FGC46381 | Y | + | + | ||||
23995963-G-A | 21849816-G-A | FGC46380 | + | + | |||||
22021055-G-A | 19859169-G-A | FGC46379 | Y | Y | + | + | |||
22230337-C-T | 20068451-C-T | DYZ19 | *** | * | |||||
19405569-C-CTGAGAT | 17293689-C-CTGAGAT | S27900 | 7×TGAGAT | *** | * | ||||
8913861-C-A | 9045820-C-A | ** | |||||||
10819078-C-T | FTB51024 | ** | |||||||
10820779-CAT-C | ** | ||||||||
8351572-C-A | 8483531-C-A | ** | |||||||
10767028-C-A | ** | ||||||||
10760302-CTACTT-C | ** | ||||||||
10824046-C-A | ** | ||||||||
10760272-T-A | ** | ||||||||
10759390-C-A | ** | ||||||||
9122270-G-T | ** | ||||||||
9108540-G-C | ** | ||||||||
9163044-G-T | 9325435-G-T | ** | |||||||
10630753-G-C | ** | ||||||||
9316871-C-A | 9479262-C-A | ** | |||||||
9501090-A-T | 9663481-A-T | ** | |||||||
9639096-G-GCA | 9801487-G-GCA | IR3_Prx | ** | ||||||
9822784-GC-G | 9985175-GC-G | ** | |||||||
9822794-AA-G | 9985185-AA-G | ** | |||||||
9924070-T-C | 10086461-T-C | ** | |||||||
9959783-T-C | 10122174-T-C | ** | |||||||
10630743-C-A | ** | ||||||||
10630773-C-T | ** | ||||||||
10690057-G-T | ** | ||||||||
9109973-G-T | ** | ||||||||
10630775-C-A | ** | ||||||||
10630782-G-T | ** | ||||||||
10630784-G-T | ** | ||||||||
10630809-A-G | ** | ||||||||
10630814-G-T | ** | ||||||||
10630827-A-T | ** | ||||||||
10837659-T-A | ** | ||||||||
10686501-C-A | ** | ||||||||
10665240-T-C | ** | ||||||||
13141271-T-G | 10630757-T-G | ** | |||||||
10838291-C-G | ** | ||||||||
13553223-A-T | 11397547-A-T | ** | |||||||
10994204-C-T | ** | ||||||||
11005377-TCATTC-T | ** | ||||||||
13216545-A-G | 11060869-A-G | ** | |||||||
13340598-G-A | 11184922-G-A | ** | |||||||
13351018-C-T | 11195342-C-T | ** | |||||||
13446413-A-T | 11290737-A-T | ** | |||||||
13556904-A-T | 11401228-A-T | ** | |||||||
10971721-T-C | ** | ||||||||
13705470-G-C | 11549794-G-C | ** | |||||||
13726371-A-C | 11570695-A-C | ** | |||||||
13726472-A-G | 11570796-A-G | ** | |||||||
13726473-T-G | 11570797-T-G | ** | |||||||
13726485-G-C | 11570809-G-C | ** | |||||||
11643369-G-T | FT219820 | ** | |||||||
11652251-A-G | ** | ||||||||
10974464-C-A | ** | ||||||||
10971719-T-C | ** | ||||||||
10859860-A-C | ** | ||||||||
10930777-A-T | ** | ||||||||
10865363-A-G | ** | ||||||||
10866906-C-A | ** | ||||||||
10876300-C-A | ** | ||||||||
8295566-G-A | 8427525-G-A | ** | |||||||
10909332-C-A | FT436238 | ** | |||||||
10909416-G-T | ** | ||||||||
10929102-C-T | ** | ||||||||
10930781-C-T | ** | ||||||||
10963796-C-T | ** | ||||||||
10930782-T-G | ** | ||||||||
10930805-C-CCACTT | ** | ||||||||
10932263-C-A | ** | ||||||||
10942914-C-T | ** | ||||||||
10950750-C-A | ** | ||||||||
10951795-C-T | ** | ||||||||
10962700-T-C | ** | ||||||||
8350553-A-G | 8482512-A-G | ** | |||||||
7590699-G-T | 7722658-G-T | ** | |||||||
8056326-A-G | 8188285-A-G | ** | |||||||
5614123-G-T | 5746082-G-T | ** | |||||||
4887644-A-C | 5019603-A-C | ** | |||||||
4930306-A-G | 5062265-A-G | ** | |||||||
5100812-C-A | 5232771-C-A | ** | |||||||
5185468-C-A | 5317427-C-A | ** | |||||||
5292824-T-G | 5424783-T-G | ** | |||||||
5561590-C-A | 5693549-C-A | ** | |||||||
5618864-T-C | 5750823-T-C | ** | |||||||
4779878-A-G | 4911837-A-G | ** | |||||||
5619007-C-A | 5750966-C-A | ** | |||||||
5648621-C-A | 5780580-C-A | ** | |||||||
5687292-C-A | 5819251-C-A | ** | |||||||
5728915-A-G | 5860874-A-G | ** | |||||||
5798972-C-A | 5930931-C-A | ** | |||||||
5798982-A-C | 5930941-A-C | ** | |||||||
4880240-C-A | 5012199-C-A | ** | |||||||
4687117-C-T | 4819076-C-T | ** | |||||||
6091649-T-G | 6223608-T-G | ** | |||||||
4144388-T-C | 4276347-T-C | ** | |||||||
3652405-G-T | 3784364-G-T | ** | |||||||
3706377-C-A | 3838336-C-A | ** | |||||||
3953879-G-T | 4085838-G-T | ** | |||||||
3981621-G-T | 4113580-G-T | ** | |||||||
4081718-C-A | 4213677-C-A | ** | |||||||
4124263-G-T | 4256222-G-T | ** | |||||||
4313017-C-A | 4444976-C-A | ** | |||||||
4687115-C-G | 4819074-C-G | ** | |||||||
4326459-T-A | 4458418-T-A | ** | |||||||
4372392-C-A | 4504351-C-A | ** | |||||||
4437782-C-A | 4569741-C-A | ** | |||||||
4553798-T-C | 4685757-T-C | ** | |||||||
4687106-T-G | 4819065-T-G | ** | |||||||
4687109-T-C | 4819068-T-C | ** | |||||||
5976522-T-C | 6108481-T-C | ** | |||||||
6442285-C-T | 6574244-C-T | ** | |||||||
7968466-T-A | 8100425-T-A | ** | |||||||
11656828-G-T | ** | ||||||||
7322728-A-G | 7454687-A-G | ** | |||||||
7381202-A-T | 7513161-A-T | ** | |||||||
7381210-CTGGACATGGTTG-C | 7513169-CTGGACATGGTTG-C | ** | |||||||
7381225-G-A | 7513184-G-A | ** | |||||||
7381228-T-A | 7513187-T-A | ** | |||||||
7409588-T-C | 7541547-T-C | ** | |||||||
7643041-C-A | 7775000-C-A | ** | |||||||
7254734-A-G | 7386693-A-G | ** | |||||||
7709480-G-A | 7841439-G-A | ** | |||||||
7709498-A-C | 7841457-A-C | ** | |||||||
7709506-T-A | 7841465-T-A | ** | |||||||
7861759-C-A | 7993718-C-A | ** | |||||||
7923726-T-A | 8055685-T-A | ** | |||||||
7967526-G-T | 8099485-G-T | ** | |||||||
7275119-C-A | 7407078-C-A | ** | |||||||
7243284-A-C | 7375243-A-C | ** | |||||||
6473607-G-T | 6605566-G-T | ** | |||||||
7094333-C-A | 7226292-C-A | ** | |||||||
6478622-T-G | 6610581-T-G | ** | |||||||
6540689-C-A | 6672648-C-A | FT96024 | ** | ||||||
6596273-C-A | 6728232-C-A | ** | |||||||
6709195-C-T | 6841154-C-T | ** | |||||||
6892726-A-T | 7024685-A-T | ** | |||||||
7063745-C-A | 7195704-C-A | ** | |||||||
7099123-T-A | 7231082-T-A | ** | |||||||
7239229-C-A | 7371188-C-A | ** | |||||||
7132165-C-A | 7264124-C-A | ** | |||||||
7138410-AA-G | 7270369-AA-G | ** | |||||||
7145654-C-A | 7277613-C-A | ** | |||||||
7149897-G-T | 7281856-G-T | ** | |||||||
7150036-A-T | 7281995-A-T | ** | |||||||
7210019-C-T | 7341978-C-T | ** | |||||||
7218132-G-A | 7350091-G-A | ** | |||||||
11652660-A-G | ** | ||||||||
14167081-G-T | 12046375-G-T | ** | |||||||
11663639-C-T | ** | ||||||||
21408850-A-G | 19246964-A-G | ** | |||||||
20742424-T-G | 18580538-T-G | P4_Prx | ** | ||||||
20840692-C-A | 18678806-C-A | P4_Gap | ** | ||||||
21042310-C-A | 18880424-C-A | ** | |||||||
21208994-A-C | 19047108-A-C | ** | |||||||
21262744-C-A | 19100858-C-A | ** | |||||||
21408799-A-G | 19246913-A-G | ** | |||||||
21498945-C-T | 19337059-C-T | ** | |||||||
20742398-T-A | 18580512-T-A | P4_Prx | ** | ||||||
21498946-C-G | 19337060-C-G | ** | |||||||
21912425-T-A | 19750539-T-A | ** | |||||||
22100998-G-C | 19939112-G-C | ** | |||||||
22211878-A-G | 20049992-A-G | ** | |||||||
22263902-C-T | 20102016-C-T | DYZ19 | ** | ||||||
22263917-T-G | 20102031-T-G | DYZ19 | ** | ||||||
20742419-T-A | 18580533-T-A | P4_Prx | ** | ||||||
20742377-T-G | 18580491-T-G | P4_Prx | ** | ||||||
22319070-AG-A | 20157184-AG-A | DYZ19 | ** | ||||||
19254357-G-A | 17142477-G-A | ** | |||||||
19013635-T-C | 16901755-T-C | ** | |||||||
19013647-A-T | 16901767-A-T | ** | |||||||
19013649-T-A | 16901769-T-A | ** | |||||||
19013654-C-T | 16901774-C-T | ** | |||||||
19079134-C-A | 16967254-C-A | ** | |||||||
19098964-C-A | 16987084-C-A | ** | |||||||
19299183-G-T | 17187303-G-T | ** | |||||||
20742363-T-G | 18580477-T-G | P4_Prx | ** | ||||||
19299400-C-G | 17187520-C-G | ** | |||||||
19479118-C-A | 17367238-C-A | ** | |||||||
19535731-T-C | 17423851-T-C | ** | |||||||
19537795-G-CA | 17425915-G-CA | ** | |||||||
19537800-GT-G | 17425920-GT-G | ** | |||||||
20742358-C-G | 18580472-C-G | P4_Prx | ** | ||||||
22263920-C-G | 20102034-C-G | DYZ19 | ** | ||||||
22517244-G-T | 20355358-G-T | ** | |||||||
18996943-C-A | 16885063-C-A | ** | |||||||
28633798-G-T | 26487651-G-T | ** | |||||||
27417722-T-G | 25271575-T-G | P1_g3 | ** | ||||||
27417727-C-G | 25271580-C-G | P1_g3 | ** | ||||||
27552562-G-T | 25406415-G-T | P1_Y2 | ** | ||||||
28441899-A-G | 26295752-A-G | P1_gr2 | ** | ||||||
28598381-C-A | 26452234-C-A | ** | |||||||
28614065-C-A | 26467918-C-A | ** | |||||||
28646015-T-A | 26499868-T-A | ** | |||||||
26376625-G-T | 24230478-G-T | P1_Y1 | ** | ||||||
28664974-T-A | 26518827-T-A | ** | |||||||
28720155-T-G | 26574008-T-G | ** | |||||||
28730110-G-T | 26583963-G-T | ** | |||||||
28748049-C-A | 26601902-C-A | ** | |||||||
28798061-T-G | 26651914-T-G | ** | |||||||
28798067-G-C | 26651920-G-C | ** | |||||||
27417720-T-A | 25271573-T-A | P1_g3 | ** | ||||||
25533523-G-T | 23387376-G-T | P1_gr1 | ** | ||||||
22593646-G-T | 20431760-G-T | ** | |||||||
23200051-T-C | 21038165-T-C | ** | |||||||
22713024-C-A | 20551138-C-A | ** | |||||||
23055155-G-A | 20893269-G-A | ** | |||||||
23066408-T-C | 20904522-T-C | ** | |||||||
23105204-C-A | 20943318-C-A | ** | |||||||
23198377-G-T | 21036491-G-T | ** | |||||||
23198386-T-G | 21036500-T-G | ** | |||||||
23211621-T-C | 21049735-T-C | ** | |||||||
24466229-C-A | 22320082-C-A | ** | |||||||
23211628-A-T | 21049742-A-T | ** | |||||||
23398241-G-A | 21236355-G-A | ** | |||||||
23465580-A-G | 21303694-A-G | ** | |||||||
23742175-T-C | 21580289-T-C | ** | |||||||
23838513-A-T | 21676627-A-T | ** | |||||||
23952459-T-C | 21806312-T-C | ** | |||||||
24013767-G-T | 21867620-G-T | ** | |||||||
19013617-A-G | 16901737-A-G | ** | |||||||
18943086-A-G | 16831206-A-G | ** | |||||||
11663641-G-C | ** | ||||||||
14620158-C-A | 12508356-C-A | ** | |||||||
14514865-A-G | 12403070-A-G | ** | |||||||
14514868-T-A | 12403073-T-A | ** | |||||||
14527755-C-A | 12415956-C-A | ** | |||||||
14585678-T-G | 12473878-T-G | ** | |||||||
14607919-C-A | 12496121-C-A | ** | |||||||
14614608-G-C | 12502806-G-C | ** | |||||||
14700726-T-A | 12588792-T-A | ** | |||||||
14468467-C-G | 12347736-C-G | ** | |||||||
15193583-C-A | 13081669-C-A | ** | |||||||
15430307-A-T | 13318427-A-T | ** | |||||||
15433018-T-A | 13321138-T-A | ** | |||||||
15474888-A-T | 13363008-A-T | ** | |||||||
15655435-T-A | 13543555-T-A | ** | |||||||
15657092-C-A | 13545212-C-A | ** | |||||||
14470499-G-T | 12349768-G-T | ** | |||||||
14446956-C-A | 12326229-C-A | FGC46375 | ** | ||||||
15770524-G-A | 13658644-G-A | FTB33396 | ** | ||||||
14122061-T-A | 12001355-T-A | ** | |||||||
11663649-A-G | ** | ||||||||
13859645-G-T | 11738939-G-T | ** | |||||||
13984105-C-A | 11863399-C-A | ** | |||||||
13984184-GT-G | 11863478-GT-G | ** | |||||||
13988973-C-T | 11868267-C-T | ** | |||||||
13993804-C-A | 11873098-C-A | ** | |||||||
3438143-A-G | 3570102-A-G | ** | |||||||
14431063-G-T | 12310336-G-T | ** | |||||||
14191296-C-T | 12070590-C-T | ** | |||||||
14191309-T-C | 12070603-T-C | ** | |||||||
14191311-C-T | 12070605-C-T | ** | |||||||
14191322-G-A | 12070616-G-A | ** | |||||||
14261613-A-G | 12140907-A-G | ** | |||||||
14308069-C-A | 12187363-C-A | ** | |||||||
15677226-G-T | 13565346-G-T | ** | |||||||
15774886-C-G | 13663006-C-G | ** | |||||||
18925473-C-A | 16813593-C-A | ** | |||||||
18270319-G-T | 16158439-G-T | ** | |||||||
17874243-G-A | 15762363-G-A | ** | |||||||
18013951-A-T | 15902071-A-T | P7_Dst | ** | ||||||
18013956-G-A | 15902076-G-A | P7_Dst | ** | ||||||
18013958-G-GTATTGC | 15902078-G-GTATTGC | P7_Dst | ** | ||||||
18013964-GT-G | 15902084-GT-G | P7_Dst | ** | ||||||
18090035-T-A | 15978155-T-A | ** | |||||||
18402443-A-G | 16290563-A-G | P6_Gap | ** | ||||||
17666859-A-G | 15554979-A-G | ** | |||||||
18623346-T-C | 16511466-T-C | ** | |||||||
18736473-A-G | 16624593-A-G | ** | |||||||
18736494-A-G | 16624614-A-G | ** | |||||||
18736513-T-G | 16624633-T-G | ** | |||||||
18819434-C-A | 16707554-C-A | ** | |||||||
18848343-A-G | 16736463-A-G | ** | |||||||
17666918-C-A | 15555038-C-A | ** | |||||||
17620615-G-T | 15508735-G-T | ** | |||||||
15971279-A-T | 13859399-A-T | ** | |||||||
16464590-A-T | 14352710-A-T | ** | |||||||
16017269-G-A | 13905389-G-A | ** | |||||||
16084148-G-A | 13972268-G-A | ** | |||||||
16241658-A-G | 14129778-A-G | ** | |||||||
16297280-C-A | 14185400-C-A | ** | |||||||
16426489-G-T | 14314609-G-T | ** | |||||||
16462575-G-T | 14350695-G-T | ** | |||||||
16490598-C-A | 14378718-C-A | ** | |||||||
17504654-A-G | 15392774-A-G | ** | |||||||
16516106-C-A | 14404226-C-A | ** | |||||||
16700454-C-A | 14588574-C-A | ** | |||||||
16827268-C-A | 14715388-C-A | ** | |||||||
16930366-G-A | 14818486-G-A | ** | |||||||
17014759-G-A | 14902879-G-A | ** | |||||||
17092569-C-A | 14980689-C-A | ** | |||||||
17402567-C-T | 15290687-C-T | ** | |||||||
5426389-TC-T | 5558348-TC-T | ** | |||||||
3580232-C-A | 3712191-C-A | ** | |||||||
3438104-A-G | 3570063-A-G | ** | |||||||
7281008-G-C | 7412967-G-C | ** | |||||||
7455908-C-A | 7587867-C-A | IR1_L | ** | ||||||
10846517-A-G | FT433877 | ** | |||||||
18439257-T-TA | 16327377-T-TA | P6_Dst | ** | ||||||
10777053-C-A | ** | ||||||||
3834512-C-A | 3966471-C-A | ** | |||||||
10925000-T-A | FT436732 | ** | |||||||
15440020-T-A | 13328140-T-A | ** | |||||||
15399419-G-GAA | 13287539-G-GAA | 15×A | ** | ||||||
19510292-GTA-G | 17398412-GTA-G | ** | |||||||
10961464-A-AC | ** | ||||||||
10961456-CA-C | ** | ||||||||
10900873-C-A | ** | ||||||||
15370813-C-A | 13258933-C-A | ** | |||||||
3079553-A-C | 3211512-A-C | ** | |||||||
15400199-C-A | 13288319-C-A | ** | |||||||
23252741-C-A | 21090855-C-A | ** | |||||||
28747697-C-G | 26601550-C-G | ** | |||||||
7866058-C-A | 7998017-C-A | ** | |||||||
10663449-C-G | ** | ||||||||
3833473-C-T | 3965432-C-T | ** | |||||||
15986635-G-A | 13874755-G-A | ** | |||||||
10760290-CGAATG-C | ** | ||||||||
28726600-C-A | 26580453-C-A | ** | |||||||
17104014-G-T | 14992134-G-T | ** | |||||||
22210487-C-A | 20048601-C-A | ** | |||||||
10949550-CTCA-C | ** | ||||||||
10949534-ACTCCTCTCCACT-A | ** | ||||||||
6096371-C-A | 6228330-C-A | ** | |||||||
17297353-C-A | 15185473-C-A | ** | |||||||
10992321-A-ATTACGTTCGG | ** | ||||||||
11669172-C-A | ** | ||||||||
20888624-G-A | 18726738-G-A | P4_Dst | ** | ||||||
7670876-C-A | 7802835-C-A | ** | |||||||
2680712-G-T | 2812671-G-T | ** | |||||||
2680710-G-T | 2812669-G-T | ** | |||||||
2680704-G-T | 2812663-G-T | ** | |||||||
28708927-C-A | 26562780-C-A | ** | |||||||
14311747-T-C | 12191041-T-C | ** | |||||||
14832187-C-A | 12720254-C-A | ** | |||||||
11652656-C-A | ** | ||||||||
16245483-C-A | 14133603-C-A | ** | |||||||
3833456-A-G | 3965415-A-G | ** | |||||||
21770401-C-A | 19608515-C-A | ** | |||||||
11030751-G-T | ** | ||||||||
15776923-C-A | 13665043-C-A | ** | |||||||
10814316-T-A | ** | ||||||||
28485834-C-A | 26339687-C-A | ** | |||||||
9618363-G-T | 9780754-G-T | IR3_Prx | ** | ||||||
7301520-G-T | 7433479-G-T | ** | |||||||
28499418-C-A | 26353271-C-A | ** | |||||||
10881721-G-T | ** | ||||||||
3437011-G-T | 3568970-G-T | ** | |||||||
19510298-TTA-T | 17398418-TTA-T | ** | |||||||
14559394-C-A | 12447595-C-A | ** | |||||||
10949582-C-CAAATCCAAAG | ** | ||||||||
7360691-C-A | 7492650-C-A | ** | |||||||
23198383-T-G | 21036497-T-G | ** | |||||||
28560946-C-A | 26414799-C-A | ** | |||||||
14467765-C-CA | 12347034-C-CA | 8×A | ** | ||||||
7823-C-A | ** | ||||||||
28798583-C-T | 26652436-C-T | ** | |||||||
11025086-TCAACC-T | ** | ||||||||
15986470-C-A | 13874590-C-A | ** | |||||||
22255151-G-C | 20093265-G-C | DYZ19 | *** | ** | |||||
9075301-T-G | 9237692-T-G | ** | |||||||
22842300-C-A | 20680414-C-A | ** | |||||||
11025127-A-C | ** | ||||||||
11025111-T-C | ** | ||||||||
11025107-T-A | ** | ||||||||
11025095-C-G | ** | ||||||||
11025077-G-T | ** | ||||||||
11025074-A-C | ** | ||||||||
7197456-A-G | 7329415-A-G | ** | |||||||
21320129-C-A | 19158243-C-A | ** | |||||||
5563117-TACAC-T | 5695076-TACAC-T | 16×AC | ** | ||||||
22425262-G-A | 20263376-G-A | DYZ19 | *** | ** | |||||
22288144-C-T | 20126258-C-T | DYZ19 | *** | ** | |||||
17568276-C-A | 15456396-C-A | ** | ** | ||||||
10663435-C-T | ** | ||||||||
15688344-T-C | 13576464-T-C | PF6362 | ** | ||||||
15276576-C-A | 13164665-C-A | ** | ** | ||||||
25995548-G-A | 23849401-G-A | P1_Y1 | ** | ||||||
14926355-T-A | 12814420-T-A | ** | |||||||
14080035-G-GAT | 11959329-G-GAT | 29×AT | ** | ||||||
2814839-A-G | 2946798-A-G | ** | |||||||
14505333-C-G | 12393538-C-G | S264/Z156 | Z8160 AM01887 | ** | |||||
3363165-TTTA-T | 3495124-TTTA-T | 5×TTA | ** | ||||||
7110944-C-A | 7242903-C-A | ** | |||||||
3079561-T-A | 3211520-T-A | 18×A | ** | ||||||
15688336-G-A | 13576456-G-A | Z2274 CTS4514 | ** | ||||||
7122995-G-C | 7254954-G-C | CTS981 | ** | ||||||
14683488-A-C | 12571554-A-C | CTS3143 | ** | ||||||
10663427-CCT-C | ** | ||||||||
11009196-A-T | ** | ||||||||
5796186-C-A | 5928145-C-A | ** | |||||||
27507474-G-T | 25361327-G-T | P1_Y2 | ** | ||||||
11038165-C-CACTAT | ** | ||||||||
11038160-C-G | ** | ||||||||
10797773-T-A | ** | ||||||||
10792069-C-A | ** | ||||||||
10931142-C-A | ** | ||||||||
7939310-C-CAA | 8071269-C-CAA | 14×A | ** | ||||||
10943702-A-C | ** | ||||||||
14065526-C-A | 11944820-C-A | ** | |||||||
7368888-C-A | 7500847-C-A | Y61959 | ** | ||||||
13480836-G-A | 11325160-G-A | ** | |||||||
13480815-A-T | 11325139-A-T | ** | |||||||
13480767-T-A | 11325091-T-A | ** | |||||||
10925005-T-C | ** | ||||||||
24595385-A-C | 22449238-A-C | P3_t2 | ** | ||||||
17285048-A-C | 15173168-A-C | ** | |||||||
11019426-C-G | ** | ||||||||
11019422-T-A | ** | ||||||||
3550568-A-C | 3682527-A-C | ** | |||||||
22263605-C-A | 20101719-C-A | DYZ19 | ** | ||||||
3274236-C-A | 3406195-C-A | ** | |||||||
10781293-C-A | ** | ||||||||
17362872-C-A | 15250992-C-A | ** | |||||||
10989495-G-T | ** | ||||||||
6992553-C-T | 7124512-C-T | 17×T | ** | ||||||
10978723-C-A | ** | ||||||||
10961461-CT-C | ** | ||||||||
7990596-C-A | 8122555-C-A | ** | |||||||
4999855-C-A | 5131814-C-A | ** | |||||||
16931972-C-A | 14820092-C-A | ** | |||||||
14511361-C-A | 12399566-C-A | ** | |||||||
10962647-C-A | ** | ||||||||
17933997-C-A | 15822117-C-A | ** | |||||||
21823246-C-A | 19661360-C-A | ** | |||||||
23036857-C-A | 20874971-C-A | ** | |||||||
10888064-C-A | ** | ||||||||
14537809-C-A | 12426010-C-A | FGC38301 | ** | ||||||
11029305-C-A | ** | ||||||||
24872021-G-T | 22725874-G-T | IR1_R | ** | ||||||
10671921-C-A | ** | ||||||||
6654933-G-T | 6786892-G-T | ** | |||||||
22241621-A-C | 20079735-A-C | DYZ19 | ** | ||||||
5127664-A-G | 5259623-A-G | ** | |||||||
10978676-C-A | ** | ||||||||
21208720-G-T | 19046834-G-T | ** | |||||||
11025987-C-A | ** | ||||||||
23066767-G-A | 20904881-G-A | ** | |||||||
11645723-G-T | ** | ||||||||
10877770-C-A | ** | ||||||||
10866696-C-A | ** | ||||||||
16181018-C-A | 14069138-C-A | ** | |||||||
28103949-C-CTT | 25957802-C-CTT | P1_Y2 | 22×T | ** | |||||
2814844-C-G | 2946803-C-G | ** | |||||||
13929270-C-G | 11808564-C-G | ** | |||||||
14815981-C-A | 12704052-C-A | ** | |||||||
28689273-C-A | 26543126-C-A | ** | |||||||
6751966-C-A | 6883925-C-A | ** | |||||||
24485674-TC-T | 22339527-TC-T | ** | |||||||
23372028-C-A | 21210142-C-A | ** | |||||||
19379557-C-A | 17267677-C-A | ** | |||||||
14986296-C-A | 12874364-C-A | ** | |||||||
3961538-C-A | 4093497-C-A | ** | |||||||
10656023-C-A | ** | ||||||||
7505994-C-A | 7637953-C-A | IR1_L | ** | ||||||
16210881-A-T | 14099001-A-T | ** | |||||||
2680718-C-A | 2812677-C-A | ** | |||||||
3229070-C-A | 3361029-C-A | FGC3269 | ** | ||||||
7664620-C-A | 7796579-C-A | ** | |||||||
2773403-C-T | 2905362-C-T | ** | |||||||
3410531-C-A | 3542490-C-A | ** | |||||||
3405557-C-A | 3537516-C-A | ** | |||||||
3396413-G-T | 3528372-G-T | ** | |||||||
3396366-G-T | 3528325-G-T | ** | |||||||
3389959-C-A | 3521918-C-A | ** | |||||||
3186024-C-A | 3317983-C-A | ** | |||||||
3158697-T-C | 3290656-T-C | FT14972 | ** | ||||||
3075375-A-G | 3207334-A-G | ** | |||||||
3045783-C-A | 3177742-C-A | ** | |||||||
3029007-C-A | 3160966-C-A | ** | |||||||
2954763-G-A | 3086722-G-A | ** | |||||||
2909624-CA-C | 3041583-CA-C | ** | |||||||
2857064-G-T | 2989023-G-T | ** | |||||||
2774812-G-T | 2906771-G-T | ** | |||||||
2768392-T-A | 2900351-T-A | ** | |||||||
10955227-T-A | ** | ||||||||
10951880-C-A | ** | ||||||||
9639090-GGCTT-G | 9801481-GGCTT-G | IR3_Prx | ** | ||||||
28519617-C-A | 26373470-C-A | ** | |||||||
21770095-C-A | 19608209-C-A | ** | |||||||
10760279-A-C | ** | ||||||||
10984788-G-C | ** | ||||||||
10898374-TTTCCA-T | ** | ||||||||
10859856-A-C | ** | ||||||||
2699665-A-G | 2831624-A-G | ** | |||||||
2852743-C-A | 2984702-C-A | FGC77080 | ** | ||||||
7174363-C-A | 7306322-C-A | ** | |||||||
16881430-C-A | 14769550-C-A | ** | |||||||
18756215-C-A | 16644335-C-A | ** | |||||||
14527555-C-A | 12415756-C-A | ** | |||||||
5449423-A-G | 5581382-A-G | ** | |||||||
24384940-T-A | 22238793-T-A | ** | |||||||
8835168-C-A | 8967127-C-A | ** | |||||||
3693625-G-T | 3825584-G-T | ** | |||||||
21127447-C-A | 18965561-C-A | ** | |||||||
17375033-G-T | 15263153-G-T | ** | |||||||
5785805-C-A | 5917764-C-A | ** | |||||||
23066779-A-T | 20904893-A-T | ** | |||||||
23066762-A-T | 20904876-A-T | ** | |||||||
23066758-T-G | 20904872-T-G | ** | |||||||
4017101-C-A | 4149060-C-A | ** | |||||||
10791149-T-C | ** | ||||||||
17735188-C-A | 15623308-C-A | ** | |||||||
6831353-C-A | 6963312-C-A | ** | |||||||
6535507-C-A | 6667466-C-A | ** | |||||||
10971712-T-C | ** | ||||||||
18951332-C-A | 16839452-C-A | ** | |||||||
10795098-A-T | ** | ||||||||
10760444-C-T | ** | ||||||||
19107428-G-A | 16995548-G-A | ** | |||||||
10760450-C-A | ** | ||||||||
23127634-C-A | 20965748-C-A | ** | |||||||
28777320-C-A | 26631173-C-A | ** | |||||||
2701320-A-G | 2833279-A-G | ** | |||||||
14511867-C-A | 12400072-C-A | ** | |||||||
19720621-C-A | 17608741-C-A | P5_Prx | ** | ||||||
23065137-G-T | 20903251-G-T | ** | |||||||
20318496-T-C | 18156610-T-C | P5_Dst | ** | ||||||
10884486-G-C | ** | ||||||||
15400334-C-A | 13288454-C-A | ** | |||||||
56850041-G-T | ** | ||||||||
14291626-T-A | 12170920-T-A | ** | |||||||
17014589-C-T | 14902709-C-T | ** | |||||||
15769040-C-A | 13657160-C-A | ** | |||||||
2888869-T-C | 3020828-T-C | ** | |||||||
10961293-T-C | ** | ||||||||
15398355-C-A | 13286475-C-A | ** | |||||||
21141159-C-A | 18979273-C-A | ** | |||||||
13932799-C-A | 11812093-C-A | ** | |||||||
10828201-C-G | ** | ||||||||
13553305-C-A | 11397629-C-A | ** | |||||||
14021465-C-A | 11900759-C-A | ** | |||||||
22362782-A-T | 20200896-A-T | DYZ19 | *** | ||||||
9774615-A-G | 9937006-A-G | *** | |||||||
13297775-G-C | 11142099-G-C | *** | |||||||
22359057-C-G | 20197171-C-G | DYZ19 | *** | ||||||
22363152-T-G | 20201266-T-G | DYZ19 | *** | ||||||
7145764-G-A | 7277723-G-A | *** | |||||||
13288733-C-A | 11133057-C-A | *** | |||||||
15108916-CTTT-C,CT | 12997003-CTTT-C,CT | 15×T | *** | ||||||
11020997-T-C | *** | ||||||||
14747510-G-A | 12635579-G-A | *** | |||||||
2902156-C-A | 3034115-C-A | *** | |||||||
22223345-G-A | 20061459-G-A | DYZ19 | *** | ||||||
14743468-G-A | 12631537-G-A | *** | |||||||
21238688-C-A | 19076802-C-A | *** | |||||||
22305974-G-C | 20144088-G-C | DYZ19 | *** | ||||||
13859824-C-T | 11739118-C-T | FT107567 | *** | ||||||
22363171-G-A | 20201285-G-A | DYZ19 | *** | ||||||
22365244-G-T | 20203358-G-T | DYZ19 | *** | ||||||
22359918-G-C | 20198032-G-C | DYZ19 | *** | ||||||
56844745-C-A | *** | ||||||||
13545356-G-GAAGAAAGAAAGA | 11389680-G-GAAGAAAGAAAGA | 11×AAGA | *** | ||||||
15180265-G-T | 13068351-G-T | *** | |||||||
2824720-A-C | 2956679-A-C | *** | |||||||
22363477-T-G | 20201591-T-G | DYZ19 | *** | ||||||
15430587-C-A | 13318707-C-A | *** | |||||||
13314721-G-A | 11159045-G-A | *** | |||||||
22359920-C-A | 20198034-C-A | DYZ19 | *** | ||||||
10999703-C-A | *** | ||||||||
22361240-A-T | 20199354-A-T | DYZ19 | *** | ||||||
5059739-G-C | 5191698-G-C | *** | |||||||
10921611-C-A | *** | ||||||||
3328029-C-T | 3459988-C-T | *** | |||||||
10825198-T-A | *** | ||||||||
15156550-C-A | 13044637-C-A | *** | |||||||
22362284-T-A | 20200398-T-A | DYZ19 | *** | ||||||
24402160-C-T | 22256013-C-T | *** | |||||||
22339274-C-T | 20177388-C-T | DYZ19 | *** | ||||||
22078132-G-T | 19916246-G-T | *** | |||||||
22362697-T-C | 20200811-T-C | DYZ19 | *** | ||||||
13196465-C-A | 11040789-C-A | *** | |||||||
10821827-G-C | *** | ||||||||
7264932-A-G | 7396891-A-G | *** | |||||||
13805066-T-CAAACG | 11684360-T-CAAACG | *** | |||||||
6121208-T-G | 6253167-T-G | *** | |||||||
6435874-G-T | 6567833-G-T | *** | |||||||
11677046-C-A | *** | ||||||||
8321435-CTTT-C,CTT | 8453394-CTTT-C,CTT | 15×T | *** | ||||||
11000366-T-C | *** | ||||||||
7241799-G-C | 7373758-G-C | *** | |||||||
14319589-A-ATG | 12198883-A-ATG | *** | |||||||
10869965-C-G | *** | ||||||||
10661030-TCCACA-T,TCCA | *** | ||||||||
18679925-CAA-C,CAAA | 16568045-CAA-C,CAAA | 25×A | *** | ||||||
10669520-ATTCCATTCCATTCCATTCCATTCCG-A,ATTCCATTCCATTCCATTCCATTCCA | *** | ||||||||
17397253-AT-A,ATT | 15285373-AT-A,ATT | 16×T | *** | ||||||
10031276-C-T | 10193667-C-T | *** | |||||||
21262504-C-A | 19100618-C-A | *** | |||||||
7241794-A-G | 7373753-A-G | *** | |||||||
22365930-A-G | 20204044-A-G | DYZ19 | *** | ||||||
10895807-G-A,T | *** | ||||||||
13405938-C-A | 11250262-C-A | *** | |||||||
25820832-GATGGC-G | 23674685-GATGGC-G | P1_b3 | *** | ||||||
7142797-C-T | 7274756-C-T | *** | |||||||
58982265-C-A | 56836118-C-A | *** | |||||||
14685939-T-C | 12574005-T-C | *** | |||||||
10938639-G-T | *** | ||||||||
13350939-G-C | 11195263-G-C | *** | |||||||
24430237-C-A | 22284090-C-A | *** | |||||||
11033838-CTCTGCTCCAT-C,CTCCACTGCAT | *** | ||||||||
21092191-CTTTTTT-C,CTT | 18930305-CTTTTTT-C,CTT | 18×T | *** | ||||||
14771668-A-T | 12659737-A-T | *** | |||||||
10921158-T-C | *** | ||||||||
10769753-T-C | *** | ||||||||
13196479-C-A | 11040803-C-A | *** | |||||||
10971094-C-G | *** | ||||||||
11646312-G-A | *** | ||||||||
11658362-C-A | *** | ||||||||
10971091-A-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: N112446 | 10852780 | 7889086 | 7976290 |
Kit: N112446 | 9936207 | 8059353 | 7928450 |
Used in age calculations | 10852780 | 8059353 | 7976290 |
Counts of SNPs | 6 | 6 |
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