Göttgens
FGC: X5ZNKMDKA Birth: Netherlands
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FGC X5ZNK |
---|---|---|---|---|---|---|---|---|
4312658-G-C | 4444617-G-C | FGC43741 | + | |||||
5341424-C-T | 5473383-C-T | FGC43743 | + | |||||
5605988-A-G | 5737947-A-G | FGC43744 | + | |||||
13532197-G-T | 11376521-G-T | FGC43758 | + | |||||
13627996-G-C | 11472320-G-C | FGC43759 | + | |||||
13981769-T-G | 11861063-T-G | FGC43760 | Y | + | ||||
14159822-A-T | 12039116-A-T | Y22167 FGC43763 | Y | Y | + | |||
16079400-C-G | 13967520-C-G | FGC43766 | Y | + | ||||
16752935-A-G | 14641055-A-G | FGC43767 | Y | Y | + | |||
21822472-G-A | 19660586-G-A | Y22177 FGC43776 | Y | Y | + | |||
28619384-C-A | 26473237-C-A | FGC43786 | + | |||||
28699816-T-C | 26553669-T-C | FGC43787 | Y | + | ||||
5180883-AT-A | 5312842-AT-A | + | ||||||
24882064-G-T | 22735917-G-T | FGC43784 | g1 | * | ||||
27054124-T-C | 24907977-T-C | FGC93 | P1_r4 | ** | ||||
13667744-TTGGAATGGAA-T | 11512068-TTGGAATGGAA-T | 4×TGGAA | ** | |||||
27315873-G-C | 25169726-G-C | P1_g3 | ** | |||||
20458443-C-T | 18296557-C-T | P5_Dst | ** | |||||
4340666-C-T | 4472625-C-T | ** | ||||||
5129733-C-T | 5261692-C-T | ** | ||||||
7393719-T-C | 7525678-T-C | ** | ||||||
8741166-G-T | 8873125-G-T | ** | ||||||
14022081-T-A | 11901375-T-A | FGC79184 | ** | |||||
19329555-C-T | 17217675-C-T | ** | ||||||
20106032-G-A | 17994152-G-A | P5_Dst | ** | |||||
58890137-A-G | 56700734-T-C | FGC78681 | ** | |||||
58900034-A-C | 56690837-T-G | ** | ||||||
27423515-G-GTATATATA | 25277368-G-GTATATATA | P1_g3 | 24×TA | ** | ||||
3705626-CA-C | 3837585-CA-C | ** | ||||||
13131005-AT-A | 10620491-AT-A | ** | ||||||
13619944-G-GTA | 11464268-G-GTA | BY167070 | ** | |||||
22503403-C-G | 20341517-C-G | DYZ19 | *** | |||||
22481576-C-G | 20319690-C-G | DYZ19 | *** | |||||
27810184-C-CAAAGAAAG | 25664037-C-CAAAGAAAG | P1_Y2 | 21×AAAG | *** | ||||
22357841-A-T | 20195955-A-T | DYZ19 | *** | |||||
58831253-T-C | 56759618-A-G | *** | ||||||
22365426-T-G | 20203540-T-G | DYZ19 | *** | |||||
22365430-G-A | 20203544-G-A | DYZ19 | *** | |||||
22365438-C-G | 20203552-C-G | DYZ19 | *** | |||||
25378987-C-CT | 23232840-C-CT | P2_r2 | 26×T | *** | ||||
25471938-G-GCCTT | 23325791-G-GCCTT | P2_r2 | 18×CCTT | *** | ||||
27583000-CTT-C | 25436853-CTT-C | P1_Y2 | 22×T | *** | ||||
22297717-A-T | 20135831-A-T | DYZ19 | *** | |||||
22297705-A-G | 20135819-A-G | DYZ19 | *** | |||||
22297684-T-A | 20135798-T-A | DYZ19 | *** | |||||
22297497-A-T | 20135611-A-T | DYZ19 | *** | |||||
22283332-T-A | 20121446-T-A | DYZ19 | *** | |||||
13848940-AGGAAC-A | 11728234-AGGAAC-A | *** | ||||||
22309955-T-A | 20148069-T-A | DYZ19 | *** | |||||
22481367-T-C | 20319481-T-C | DYZ19 | *** | |||||
22481378-G-A | 20319492-G-A | DYZ19 | *** | |||||
22351269-G-T | 20189383-G-T | DYZ19 | *** | |||||
22309978-G-C | 20148092-G-C | DYZ19 | *** | |||||
22248975-A-T | 20087089-A-T | DYZ19 | *** | |||||
22347145-C-A | 20185259-C-A | DYZ19 | *** | |||||
13745991-T-C | 11590315-T-C | *** | ||||||
9302434-G-C | 9464825-G-C | *** | ||||||
22224008-T-C | 20062122-T-C | DYZ19 | *** | |||||
24862290-G-A | 22716143-G-A | IR1_R | *** | |||||
22328421-TA-CT | 20166535-TA-CT | DYZ19 | *** | |||||
22289475-AC-GG | 20127589-AC-GG | DYZ19 | *** | |||||
3930844-CAT-C | 4062803-CAT-C | 8×AT | *** | |||||
5867169-G-GT | 5999128-G-GT | *** | ||||||
13257526-G-A | 11101850-G-A | *** | ||||||
21965774-C-A | 19803888-C-A | 19×A | *** | |||||
22450153-A-C | 20288267-A-C | DYZ19 | *** | |||||
22365381-C-G | 20203495-C-G | DYZ19 | *** | |||||
22330202-T-C | 20168316-T-C | YFS033217 | DYZ19 | *** | ||||
21346975-T-TTATATA | 19185089-T-TTATATA | 29×TA | *** | |||||
5241125-T-C | 5373084-T-C | 10×TCCC | *** | |||||
22488826-C-G | 20326940-C-G | Z8262 | DYZ19 | *** | ||||
13726907-G-A | 11571231-G-A | *** | ||||||
25256636-G-T | 23110489-G-T | P2_r1 | 15×T | *** | ||||
22421272-TTCAT-ATCAA | 20259386-TTCAT-ATCAA | DYZ19 | *** | |||||
13743034-T-A | 11587358-T-A | *** | ||||||
25256634-G-T | 23110487-G-T | P2_r1 | *** | |||||
22297714-T-C | 20135828-T-C | DYZ19 | *** | |||||
22297708-T-A | 20135822-T-A | DYZ19 | *** | |||||
22297702-T-A | 20135816-T-A | DYZ19 | *** | |||||
22360830-C-G | 20198944-C-G | DYZ19 | *** | |||||
26228780-G-T | 24082633-G-T | P1_Y1 | *** | |||||
13454813-A-ATTCCC | 11299137-A-ATTCCC | *** | ||||||
22360838-CTTAA-TTTAC | 20198952-CTTAA-TTTAC | DYZ19 | *** | |||||
22421163-TTTC-CTTG | 20259277-TTTC-CTTG | DYZ19 | *** | |||||
22421286-GAAC-CAAT | 20259400-GAAC-CAAT | DYZ19 | *** | |||||
26874730-AGAAG-A | 24728583-AGAAG-A | P1_r3 | 17×GAAG | *** | ||||
13729713-C-T | 11574037-C-T | *** | ||||||
26060083-T-A | 23913936-T-A | P1_Y1 | *** | |||||
58857137-C-T | 56733734-G-A | *** | ||||||
24231991-T-G | 22085844-T-G | P3_b1 | *** | |||||
26170527-G-GGAAGAAGAA | 24024380-G-GGAAGAAGAA | P1_Y1 | 23×GAA | *** | ||||
22293343-T-A | 20131457-T-A | DYZ19 | *** | |||||
22322194-G-T | 20160308-G-T | DYZ19 | *** | |||||
58830725-C-G | 56760146-G-C | *** | ||||||
22347249-A-C | 20185363-A-C | DYZ19 | *** | |||||
25207776-T-A | 23061629-T-A | P2_r1 | *** | |||||
24232077-G-A | 22085930-G-A | P3_b1 | *** | |||||
20426278-T-A | 18264392-T-A | P5_Dst | *** | |||||
22481516-T-A | 20319630-T-A | DYZ19 | *** | |||||
58869733-G-T | 56721138-C-A | *** | ||||||
9232750-A-G | 9395141-A-G | *** | ||||||
22499354-A-G | 20337468-A-G | DYZ19 | *** | |||||
13267936-CA-TT | 11112260-CA-TT | *** | ||||||
13468395-CCTGGAG-TCTAGAC | 11312719-CCTGGAG-TCTAGAC | *** | ||||||
24388082-A-ATT | 22241935-A-ATT | *** | ||||||
22358175-T-A | 20196289-T-A | DYZ19 | *** | |||||
22358243-G-T | 20196357-G-T | DYZ19 | *** | |||||
21464204-G-GAAAGAAAA | 19302318-G-GAAAGAAAA | *** | ||||||
27483131-TG-CA | 25336984-TG-CA | P1_Y2 | *** | |||||
20426261-T-G | 18264375-T-G | P5_Dst | *** | |||||
24910853-CAT-C | 22764706-CAT-C | g1 | 26×AT | *** | ||||
13733531-T-A | 11577855-T-A | *** | ||||||
26310770-G-T | 24164623-G-T | P1_Y1 | *** | |||||
22310749-G-T | 20148863-G-T | DYZ19 | *** | |||||
22351270-T-C | 20189384-T-C | DYZ19 | *** | |||||
9502246-C-G | 9664637-C-G | *** | ||||||
22324469-A-C | 20162583-A-C | DYZ19 | *** | |||||
16683018-T-G | 14571138-T-G | *** | ||||||
18892295-A-T | 16780415-A-T | *** | ||||||
16266491-T-C | 14154611-T-C | *** | ||||||
22310811-T-C | 20148925-T-C | DYZ19 | *** | |||||
13489297-C-T | 11333621-C-T | *** | ||||||
22347129-A-G | 20185243-A-G | DYZ19 | *** | |||||
2791002-C-T | 2922961-C-T | PR4200 FT280287 | *** | |||||
3457916-C-T | 3589875-C-T | *** | ||||||
3461510-T-C | 3593469-T-C | *** | ||||||
4439306-G-A | 4571265-G-A | *** | ||||||
4699042-A-T | 4831001-A-T | *** | ||||||
4821750-G-A | 4953709-G-A | *** | ||||||
4821755-T-A | 4953714-T-A | *** | ||||||
4822662-G-A | 4954621-G-A | *** | ||||||
5107359-C-A | 5239318-C-A | *** | ||||||
6288943-C-T | 6420902-C-T | IR3_Dst | *** | |||||
6366087-T-A | 6498046-T-A | *** | ||||||
6556887-C-T | 6688846-C-T | *** | ||||||
6687186-A-G | 6819145-A-G | *** | ||||||
6747469-C-A | 6879428-C-A | *** | ||||||
6779048-C-T | 6911007-C-T | *** | ||||||
6955002-A-T | 7086961-A-T | *** | ||||||
7001639-A-G | 7133598-A-G | *** | ||||||
7026936-G-A | 7158895-G-A | *** | ||||||
7076506-G-A | 7208465-G-A | *** | ||||||
7076510-G-A | 7208469-G-A | *** | ||||||
8064437-A-G | 8196396-A-G | *** | ||||||
8174381-A-T | 8306340-A-T | *** | ||||||
8369841-T-A | 8501800-T-A | *** | ||||||
8369842-T-C | 8501801-T-C | *** | ||||||
8741301-G-T | 8873260-G-T | *** | ||||||
8811926-G-A | 8943885-G-A | *** | ||||||
9185312-T-C | 9347703-T-C | *** | ||||||
9199722-C-T | 9362113-C-T | *** | ||||||
9199733-G-A | 9362124-G-A | *** | ||||||
9210781-A-G | 9373172-A-G | *** | ||||||
9428826-C-A | 9591217-C-A | *** | ||||||
9502234-C-T | 9664625-C-T | *** | ||||||
9625507-A-C | 9787898-A-C | IR3_Prx | *** | |||||
9781288-G-A | 9943679-G-A | *** | ||||||
9910941-C-A | 10073332-C-A | *** | ||||||
10052813-G-T | 10215204-G-T | *** | ||||||
10092367-G-A | 10254758-G-A | *** | ||||||
13223491-A-G | 11067815-A-G | *** | ||||||
13253241-A-C | 11097565-A-C | *** | ||||||
13261207-T-C | 11105531-T-C | *** | ||||||
13389054-C-A | 11233378-C-A | *** | ||||||
13393228-C-T | 11237552-C-T | *** | ||||||
13425563-A-T | 11269887-A-T | *** | ||||||
13440423-C-G | 11284747-C-G | *** | ||||||
13489301-T-C | 11333625-T-C | *** | ||||||
13489651-G-T | 11333975-G-T | *** | ||||||
13559479-T-G | 11403803-T-G | *** | ||||||
13563258-C-T | 11407582-C-T | *** | ||||||
13598402-A-C | 11442726-A-C | *** | ||||||
13598525-C-A | 11442849-C-A | *** | ||||||
13726811-C-A | 11571135-C-A | *** | ||||||
13726937-A-T | 11571261-A-T | *** | ||||||
13733511-T-A | 11577835-T-A | *** | ||||||
13742914-T-C | 11587238-T-C | *** | ||||||
13743037-A-G | 11587361-A-G | *** | ||||||
13745472-G-C | 11589796-G-C | *** | ||||||
13745800-A-T | 11590124-A-T | *** | ||||||
13745814-G-A | 11590138-G-A | *** | ||||||
14047463-A-T | 11926757-A-T | *** | ||||||
14204330-A-G | 12083624-A-G | *** | ||||||
14258357-A-G | 12137651-A-G | *** | ||||||
15121751-C-T | 13009838-C-T | *** | ||||||
15142652-G-T | 13030739-G-T | *** | ||||||
15142654-T-A | 13030741-T-A | *** | ||||||
15148687-A-G | 13036774-A-G | *** | ||||||
15297024-C-G | 13185123-C-G | *** | ||||||
15626972-G-T | 13515092-G-T | *** | ||||||
15636482-G-A | 13524602-G-A | *** | ||||||
15644580-G-T | 13532700-G-T | *** | ||||||
15797715-A-G | 13685835-A-G | *** | ||||||
15797716-G-A | 13685836-G-A | *** | ||||||
15834675-G-A | 13722795-G-A | *** | ||||||
15883017-C-T | 13771137-C-T | *** | ||||||
16169584-T-G | 14057704-T-G | *** | ||||||
16266485-T-C | 14154605-T-C | *** | ||||||
16266486-T-C | 14154606-T-C | *** | ||||||
16266505-A-G | 14154625-A-G | *** | ||||||
16683027-G-A | 14571147-G-A | *** | ||||||
16683048-A-G | 14571168-A-G | *** | ||||||
16683071-T-A | 14571191-T-A | *** | ||||||
16683079-T-A | 14571199-T-A | *** | ||||||
16683083-T-C | 14571203-T-C | *** | ||||||
16683087-A-C | 14571207-A-C | *** | ||||||
16683100-C-T | 14571220-C-T | *** | ||||||
16701286-A-C | 14589406-A-C | *** | ||||||
16814341-C-A | 14702461-C-A | *** | ||||||
16978667-C-A | 14866787-C-A | *** | ||||||
16978712-T-C | 14866832-T-C | *** | ||||||
17520016-C-T | 15408136-C-T | *** | ||||||
17728357-G-A | 15616477-G-A | *** | ||||||
17797579-T-C | 15685699-T-C | *** | ||||||
17855708-G-T | 15743828-G-T | *** | ||||||
18054894-G-T | 15943014-G-T | *** | ||||||
18131781-A-C | 16019901-A-C | *** | ||||||
18131788-A-T | 16019908-A-T | *** | ||||||
18131791-G-T | 16019911-G-T | *** | ||||||
18131793-G-A | 16019913-G-A | *** | ||||||
18131800-T-C | 16019920-T-C | *** | ||||||
18131803-T-G | 16019923-T-G | *** | ||||||
18131809-C-T | 16019929-C-T | *** | ||||||
18297958-C-A | 16186078-C-A | P6_Prx | *** | |||||
18297989-G-T | 16186109-G-T | P6_Prx | *** | |||||
18329102-G-T | 16217222-G-T | P6_Prx | *** | |||||
18351765-T-A | 16239885-T-A | P6_Prx | *** | |||||
18361671-T-A | 16249791-T-A | P6_Prx | *** | |||||
18444272-G-T | 16332392-G-T | P6_Dst | *** | |||||
18448208-G-T | 16336328-G-T | P6_Dst | *** | |||||
18480402-A-T | 16368522-A-T | P6_Dst | *** | |||||
18767235-A-T | 16655355-A-T | *** | ||||||
18848017-C-T | 16736137-C-T | *** | ||||||
19663075-G-T | 17551195-G-T | P5_Prx | *** | |||||
19668675-G-A | 17556795-G-A | P5_Prx | *** | |||||
19740840-A-G | 17628960-A-G | P5_Prx | *** | |||||
19741187-T-A | 17629307-T-A | P5_Prx | *** | |||||
19745155-C-T | 17633275-C-T | P5_Prx | *** | |||||
19771526-G-A | 17659646-G-A | P5_Prx | *** | |||||
19803054-A-T | 17691174-A-T | P5_Prx | *** | |||||
19803057-A-T | 17691177-A-T | P5_Prx | *** | |||||
19937218-A-C | 17825338-A-C | P5_Prx | *** | |||||
19993237-G-A | 17881357-G-A | P5_Prx | *** | |||||
20016730-T-C | 17904850-T-C | P5_Prx | *** | |||||
20084892-G-T | 17973012-G-T | P5_Dst | *** | |||||
20084980-A-T | 17973100-A-T | P5_Dst | *** | |||||
20350748-T-A | 18188862-T-A | P5_Dst | *** | |||||
20404507-C-T | 18242621-C-T | P5_Dst | *** | |||||
20404550-G-A | 18242664-G-A | P5_Dst | *** | |||||
20404567-G-A | 18242681-G-A | P5_Dst | *** | |||||
20404597-A-T | 18242711-A-T | P5_Dst | *** | |||||
20404611-C-T | 18242725-C-T | P5_Dst | *** | |||||
20426129-A-G | 18264243-A-G | P5_Dst | *** | |||||
20426178-C-A | 18264292-C-A | P5_Dst | *** | |||||
20426291-T-G | 18264405-T-G | P5_Dst | *** | |||||
20426314-T-A | 18264428-T-A | P5_Dst | *** | |||||
20501866-T-G | 18339980-T-G | P5_Dst | *** | |||||
20553862-C-A | 18391976-C-A | P5_Dst | *** | |||||
20558157-G-T | 18396271-G-T | P5_Dst | *** | |||||
20568368-T-A | 18406482-T-A | P5_Dst | *** | |||||
20610684-A-G | 18448798-A-G | P5_Dst | *** | |||||
20646055-A-T | 18484169-A-T | P4_Prx | *** | |||||
20778893-G-T | 18617007-G-T | P4_Prx | *** | |||||
20803049-T-A | 18641163-T-A | P4_Gap | *** | |||||
20894618-C-T | 18732732-C-T | P4_Dst | *** | |||||
21096669-T-C | 18934783-T-C | *** | ||||||
21351453-C-A | 19189567-C-A | *** | ||||||
22154799-C-T | 19992913-C-T | *** | ||||||
22231970-C-G | 20070084-C-G | DYZ19 | *** | |||||
22249002-C-T | 20087116-C-T | DYZ19 | *** | |||||
22249082-C-G | 20087196-C-G | DYZ19 | *** | |||||
22249104-T-A | 20087218-T-A | DYZ19 | *** | |||||
22266123-T-G | 20104237-T-G | DYZ19 | *** | |||||
22267246-T-A | 20105360-T-A | DYZ19 | *** | |||||
22297200-T-C | 20135314-T-C | DYZ19 | *** | |||||
22297214-G-C | 20135328-G-C | DYZ19 | *** | |||||
22297464-A-C | 20135578-A-C | DYZ19 | *** | |||||
22310665-C-A | 20148779-C-A | DYZ19 | *** | |||||
22310690-A-T | 20148804-A-T | DYZ19 | *** | |||||
22310748-A-C | 20148862-A-C | DYZ19 | *** | |||||
22310770-C-A | 20148884-C-A | DYZ19 | *** | |||||
22310797-T-A | 20148911-T-A | DYZ19 | *** | |||||
22310803-T-A | 20148917-T-A | DYZ19 | *** | |||||
22310825-G-A | 20148939-G-A | DYZ19 | *** | |||||
22310831-A-T | 20148945-A-T | DYZ19 | *** | |||||
22310833-T-A | 20148947-T-A | DYZ19 | *** | |||||
22311133-C-A | 20149247-C-A | DYZ19 | *** | |||||
22330231-T-C | 20168345-T-C | DYZ19 | *** | |||||
22332085-G-A | 20170199-G-A | DYZ19 | *** | |||||
22332314-C-A | 20170428-C-A | DYZ19 | *** | |||||
22358796-A-C | 20196910-A-C | DYZ19 | *** | |||||
22363427-T-A | 20201541-T-A | DYZ19 | *** | |||||
22363435-C-G | 20201549-C-G | DYZ19 | *** | |||||
22365329-A-G | 20203443-A-G | DYZ19 | *** | |||||
22365429-C-T | 20203543-C-T | DYZ19 | *** | |||||
22368063-G-C | 20206177-G-C | DYZ19 | *** | |||||
22481444-G-C | 20319558-G-C | DYZ19 | *** | |||||
22481451-T-G | 20319565-T-G | DYZ19 | *** | |||||
22481504-G-A | 20319618-G-A | DYZ19 | *** | |||||
22481549-T-C | 20319663-T-C | DYZ19 | *** | |||||
22498817-A-C | 20336931-A-C | DYZ19 | *** | |||||
22503066-C-T | 20341180-C-T | DYZ19 | *** | |||||
22503069-A-T | 20341183-A-T | DYZ19 | *** | |||||
22503077-T-G | 20341191-T-G | DYZ19 | *** | |||||
22503088-A-C | 20341202-A-C | DYZ19 | *** | |||||
22503527-T-A | 20341641-T-A | DYZ19 | *** | |||||
22503528-T-G | 20341642-T-G | DYZ19 | *** | |||||
22503605-G-T | 20341719-G-T | DYZ19 | *** | |||||
22503620-C-T | 20341734-C-T | DYZ19 | *** | |||||
22692882-G-T | 20530996-G-T | *** | ||||||
22768913-C-T | 20607027-C-T | *** | ||||||
22883403-A-C | 20721517-A-C | *** | ||||||
22984018-C-A | 20822132-C-A | *** | ||||||
22984108-C-A | 20822222-C-A | *** | ||||||
22988153-G-C | 20826267-G-C | *** | ||||||
23076422-G-A | 20914536-G-A | *** | ||||||
23100444-A-T | 20938558-A-T | *** | ||||||
23180931-G-A | 21019045-G-A | *** | ||||||
23210375-T-C | 21048489-T-C | *** | ||||||
23210380-C-T | 21048494-C-T | *** | ||||||
23210385-G-A | 21048499-G-A | *** | ||||||
23210395-G-A | 21048509-G-A | *** | ||||||
23229632-C-T | 21067746-C-T | *** | ||||||
23521026-G-A | 21359140-G-A | *** | ||||||
23657356-T-G | 21495470-T-G | *** | ||||||
23722849-G-A | 21560963-G-A | *** | ||||||
23724236-C-A | 21562350-C-A | *** | ||||||
24111439-A-T | 21965292-A-T | P3_b1 | *** | |||||
24175124-T-C | 22028977-T-C | P3_b1 | *** | |||||
24187906-C-T | 22041759-C-T | P3_b1 | *** | |||||
24278329-A-G | 22132182-A-G | P3_b1 | *** | |||||
24304800-C-A | 22158653-C-A | P3_t1 | *** | |||||
24304849-C-A | 22158702-C-A | P3_t1 | *** | |||||
24486182-C-A | 22340035-C-A | *** | ||||||
24486195-T-G | 22340048-T-G | *** | ||||||
24534603-A-C | 22388456-A-C | P3_t2 | *** | |||||
24637658-A-G | 22491511-A-G | P3_t2 | *** | |||||
24650444-A-G | 22504297-A-G | P3_b2 | *** | |||||
24695813-G-T | 22549666-G-T | P3_b2 | *** | |||||
24744504-T-C | 22598357-T-C | P3_b2 | *** | |||||
24748043-A-T | 22601896-A-T | P3_b2 | *** | |||||
24771049-C-T | 22624902-C-T | P3_b2 | *** | |||||
24771056-A-T | 22624909-A-T | P3_b2 | *** | |||||
24862232-C-A | 22716085-C-A | IR1_R | *** | |||||
25046528-G-T | 22900381-G-T | g1 | *** | |||||
25046667-G-T | 22900520-G-T | g1 | *** | |||||
25068260-G-T | 22922113-G-T | g1 | *** | |||||
25107070-G-T | 22960923-G-T | g1 | *** | |||||
25107071-A-C | 22960924-A-C | g1 | *** | |||||
25110294-C-A | 22964147-C-A | g1 | *** | |||||
25112916-A-G | 22966769-A-G | g1 | *** | |||||
25201756-G-T | 23055609-G-T | g1 | *** | |||||
25207678-C-A | 23061531-C-A | P2_r1 | *** | |||||
25207713-C-A | 23061566-C-A | P2_r1 | *** | |||||
25207714-T-C | 23061567-T-C | P2_r1 | *** | |||||
25207803-A-G | 23061656-A-G | P2_r1 | *** | |||||
25239855-G-T | 23093708-G-T | P2_r1 | *** | |||||
25297708-C-A | 23151561-C-A | P2_r1 | *** | |||||
25309000-G-A | 23162853-G-A | P2_r1 | *** | |||||
25376608-G-T | 23230461-G-T | P2_r2 | *** | |||||
25466164-C-A | 23320017-C-A | P2_r2 | *** | |||||
25466167-C-A | 23320020-C-A | P2_r2 | *** | |||||
25466178-T-A | 23320031-T-A | P2_r2 | *** | |||||
25466509-G-A | 23320362-G-A | P2_r2 | *** | |||||
25466510-T-A | 23320363-T-A | P2_r2 | *** | |||||
25521841-T-C | 23375694-T-C | P1_gr1 | *** | |||||
25561633-T-C | 23415486-T-C | P1_gr1 | *** | |||||
25626292-A-C | 23480145-A-C | P1_b3 | *** | |||||
25700675-A-T | 23554528-A-T | P1_b3 | *** | |||||
25717399-C-A | 23571252-C-A | P1_b3 | *** | |||||
25779437-A-G | 23633290-A-G | P1_b3 | *** | |||||
25791854-A-T | 23645707-A-T | P1_b3 | 15×T | *** | ||||
25791889-G-T | 23645742-G-T | P1_b3 | *** | |||||
25791892-G-T | 23645745-G-T | P1_b3 | *** | |||||
25812202-T-G | 23666055-T-G | P1_b3 | *** | |||||
25814207-A-G | 23668060-A-G | P1_b3 | *** | |||||
25845129-G-A | 23698982-G-A | P1_b3 | *** | |||||
25845135-C-A | 23698988-C-A | P1_b3 | *** | |||||
25847367-A-C | 23701220-A-C | P1_b3 | *** | |||||
25939167-C-T | 23793020-C-T | P1_Y1 | *** | |||||
25945002-G-T | 23798855-G-T | P1_Y1 | 16×T | *** | ||||
26046506-C-T | 23900359-C-T | P1_Y1 | *** | |||||
26047999-C-T | 23901852-C-T | P1_Y1 | *** | |||||
26059663-C-A | 23913516-C-A | P1_Y1 | *** | |||||
26279004-G-A | 24132857-G-A | P1_Y1 | *** | |||||
26296088-G-A | 24149941-G-A | P1_Y1 | *** | |||||
26311251-C-T | 24165104-C-T | P1_Y1 | *** | |||||
26343867-G-T | 24197720-G-T | P1_Y1 | *** | |||||
26352983-A-G | 24206836-A-G | P1_Y1 | *** | |||||
26418115-G-A | 24271968-G-A | P1_Y1 | *** | |||||
26418164-C-A | 24272017-C-A | P1_Y1 | *** | |||||
26421932-A-T | 24275785-A-T | P1_Y1 | *** | |||||
26439802-A-T | 24293655-A-T | P1_Y1 | *** | |||||
26463633-G-T | 24317486-G-T | P1_Y1 | *** | |||||
26463653-G-T | 24317506-G-T | P1_Y1 | *** | |||||
26507546-C-T | 24361399-C-T | P1_Y1 | *** | |||||
26566349-T-C | 24420202-T-C | P1_g2 | *** | |||||
26584367-C-A | 24438220-C-A | P1_g2 | *** | |||||
26612532-A-T | 24466385-A-T | P1_g2 | *** | |||||
26709026-T-C | 24562879-T-C | P1_g2 | *** | |||||
26810681-A-C | 24664534-A-C | P1_g2 | *** | |||||
26810696-T-C | 24664549-T-C | P1_g2 | *** | |||||
26902085-G-A | 24755938-G-A | P1_r3 | *** | |||||
26902092-C-A | 24755945-C-A | P1_r3 | *** | |||||
27021260-T-A | 24875113-T-A | P1_r4 | *** | |||||
27071863-C-A | 24925716-C-A | P1_r4 | *** | |||||
27181524-T-C | 25035377-T-C | P1_g3 | *** | |||||
27222068-G-A | 25075921-G-A | P1_g3 | *** | |||||
27222082-C-T | 25075935-C-T | P1_g3 | *** | |||||
27222096-T-A | 25075949-T-A | P1_g3 | *** | |||||
27222138-G-A | 25075991-G-A | P1_g3 | *** | |||||
27436525-T-G | 25290378-T-G | P1_Y2 | *** | |||||
27436544-G-T | 25290397-G-T | P1_Y2 | *** | |||||
27436545-C-G | 25290398-C-G | P1_Y2 | *** | |||||
27483042-G-A | 25336895-G-A | P1_Y2 | *** | |||||
27499156-T-A | 25353009-T-A | P1_Y2 | *** | |||||
27506408-G-A | 25360261-G-A | P1_Y2 | *** | |||||
27529322-A-C | 25383175-A-C | P1_Y2 | *** | |||||
27546088-C-A | 25399941-C-A | P1_Y2 | *** | |||||
27596548-T-G | 25450401-T-G | P1_Y2 | *** | |||||
27644145-C-T | 25497998-C-T | P1_Y2 | *** | |||||
27733692-G-A | 25587545-G-A | P1_Y2 | *** | |||||
27837913-C-T | 25691766-C-T | P1_Y2 | *** | |||||
27864349-A-T | 25718202-A-T | P1_Y2 | *** | |||||
28016915-G-T | 25870768-G-T | P1_Y2 | *** | |||||
28016989-C-T | 25870842-C-T | P1_Y2 | *** | |||||
28072499-G-C | 25926352-G-C | P1_Y2 | *** | |||||
28076479-T-G | 25930332-T-G | P1_Y2 | *** | |||||
28253325-T-A | 26107178-T-A | P1_b4 | *** | |||||
28253354-T-G | 26107207-T-G | P1_b4 | *** | |||||
28253388-A-G | 26107241-A-G | P1_b4 | *** | |||||
28263073-G-T | 26116926-G-T | P1_b4 | *** | |||||
28324193-A-G | 26178046-A-G | P1_b4 | *** | |||||
28336655-T-G | 26190508-T-G | P1_b4 | *** | |||||
28345690-T-C | 26199543-T-C | P1_gr2 | 19×AC | *** | ||||
28428135-A-G | 26281988-A-G | P1_gr2 | *** | |||||
28487093-A-G | 26340946-A-G | *** | ||||||
28491672-C-T | 26345525-C-T | *** | ||||||
58834338-C-T | 56756533-G-A | *** | ||||||
58834686-C-A | 56756185-G-T | *** | ||||||
58838161-A-C | 56752710-T-G | *** | ||||||
58838190-C-G | 56752681-G-C | *** | ||||||
58838709-A-T | 56752162-T-A | *** | ||||||
58844472-A-G | 56746399-T-C | *** | ||||||
58845083-T-C | 56745788-A-G | *** | ||||||
58846546-A-T | 56744325-T-A | *** | ||||||
58851747-T-C | 56739124-A-G | *** | ||||||
58854685-T-G | 56736186-A-C | *** | ||||||
58856695-T-G | 56734176-A-C | *** | ||||||
58856700-C-G | 56734171-G-C | *** | ||||||
58861901-G-T | 56728970-C-A | *** | ||||||
58874579-G-A | 56716292-C-T | *** | ||||||
58887942-A-C | 56702929-T-G | *** | ||||||
58899919-A-G | 56690952-T-C | *** | ||||||
58908808-T-A | 56682063-A-T | *** | ||||||
58908857-T-A | 56682014-A-T | *** | ||||||
13661295-G-GGAATT | 11505619-G-GGAATT | *** | ||||||
3477851-GGTGTGTGT-G | 3609810-GGTGTGTGT-G | 17×GT | *** | |||||
3588094-G-GTA | 3720053-G-GTA | 24×TA | *** | |||||
4177137-T-TAC | 4309096-T-TAC | 18×AC | *** | |||||
5797434-GATAT-G | 5929393-GATAT-G | 21×AT | *** | |||||
7927084-A-AT | 8059043-A-AT | *** | ||||||
8575985-G-TT | 8707944-G-TT | *** | ||||||
10024349-T-TTC | 10186740-T-TTC | *** | ||||||
13257287-ATA-TTT | 11101611-ATA-TTT | *** | ||||||
13486692-TAGAGAT-CAGAAAC | 11331016-TAGAGAT-CAGAAAC | *** | ||||||
13489330-AGGG-GGGA | 11333654-AGGG-GGGA | *** | ||||||
13489356-TGCGT-GGCGA | 11333680-TGCGT-GGCGA | *** | ||||||
13489393-TGCCTGGGAT-GGGCTGTGAG | 11333717-TGCCTGGGAT-GGGCTGTGAG | *** | ||||||
13729376-CATC-AATA | 11573700-CATC-AATA | *** | ||||||
13829444-G-GGAATT | 11708738-G-GGAATT | *** | ||||||
14102319-A-ATCTT | 11981613-A-ATCTT | *** | ||||||
14866157-G-GTGTT | 12754227-G-GTGTT | *** | ||||||
15047298-T-TA | 12935388-T-TA | *** | ||||||
17323311-AAGG-A | 15211431-AAGG-A | *** | ||||||
19372287-T-TAGAG | 17260407-T-TAGAG | *** | ||||||
19372289-G-GATAT | 17260409-G-GATAT | *** | ||||||
20470034-AT-A | 18308148-AT-A | P5_Dst | 29×T | *** | ||||
21503994-ATTTTTTT-A | 19342108-ATTTTTTT-A | 19×T | *** | |||||
22241281-CAC-AAT | 20079395-CAC-AAT | DYZ19 | *** | |||||
22357298-TG-GT | 20195412-TG-GT | DYZ19 | *** | |||||
22358325-GAAGC-TAAGT | 20196439-GAAGC-TAAGT | DYZ19 | *** | |||||
22420964-AGGTA-TTGTG | 20259078-AGGTA-TTGTG | DYZ19 | *** | |||||
24425334-C-CACAT | 22279187-C-CACAT | *** | ||||||
26170515-A-AGAAGAAGAG | 24024368-A-AGAAGAAGAG | P1_Y1 | *** | |||||
26810756-GCCA-CCCC | 24664609-GCCA-CCCC | P1_g2 | *** | |||||
27528849-CAA-C | 25382702-CAA-C | P1_Y2 | 19×A | *** | ||||
27810273-A-AAAGAAAGAAAGG | 25664126-A-AAAGAAAGAAAGG | P1_Y2 | 16×AAGG | *** | ||||
28792975-TGGAA-T | 26646828-TGGAA-T | *** | ||||||
58899902-TGAGTCCATTCCAT-CGAG | 56690956-ATGGAATGGACTCA-CTCG | *** | ||||||
59019511-A-AACAC | 56873364-A-AACAC | 20×AC | *** | |||||
59019552-A-ACACAC | 56873405-A-ACACAC | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.