McNeiladge
FTDNA: 227117, BigY2: 227117, BigY3: 227117MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 227117 | BigY2 227117 | BigY3 227117 |
---|---|---|---|---|---|---|---|---|---|---|
25617956-A-G | 23471809-A-G | P1_gr1 | A+ | |||||||
9474412-G-T | 9636803-G-T | A+ | ||||||||
20386823-G-C | 18224937-G-C | P5_Dst | A+ | |||||||
6392390-C-A | 6524349-C-A | *** | A* | A* | ||||||
19712624-G-A | 17600744-G-A | P5_Prx | *** | A* | A* | |||||
19792957-C-G | 17681077-C-G | P5_Prx | *** | A* | A* | |||||
19875340-G-A | 17763460-G-A | P5_Prx | *** | A* | A* | |||||
22231549-G-C | 20069663-G-C | DYZ19 | *** | A* | ||||||
24282790-C-T | 22136643-C-T | P3_t1 | A* | A* | ||||||
26142862-G-A | 23996715-G-A | P1_Y1 | A* | A* | ||||||
20323695-C-CT | 18161809-C-CT | P5_Dst | 9×T | A* | ||||||
19655006-G-T | 17543126-G-T | P5_Prx | A* | |||||||
19685735-G-A | 17573855-G-A | P5_Prx | A* | |||||||
20627858-C-G | 18465972-C-G | P4_Prx | A* | |||||||
20720061-G-T | 18558175-G-T | P4_Prx | A* | |||||||
20924113-C-A | 18762227-C-A | P4_Dst | A* | |||||||
26330369-G-T | 24184222-G-T | P1_Y1 | A* | |||||||
27632064-C-A | 25485917-C-A | P1_Y2 | A* | |||||||
2807024-TTATATATATATATATATATATATATA-T | 2938983-TTATATATATATATATATATATATATA-T | 20×TA | + | + | + | |||||
2877789-G-A | 3009748-G-A | FGC40132 | Y | Y | + | + | + | |||
4925615-T-C | 5057574-T-C | FGC80315 | + | + | + | |||||
6593928-G-C | 6725887-G-C | FGC40134 | + | + | + | |||||
6931120-G-C | 7063079-G-C | FGC80316 | Y | Y | + | + | + | |||
7216931-T-G | 7348890-T-G | FGC40135 | Y | Y | + | + | + | |||
7222426-T-C | 7354385-T-C | FGC80317 | Y | ** | + | + | ||||
7583951-T-C | 7715910-T-C | FGC40136 | Y | Y | + | + | + | |||
8381040-T-A | 8512999-T-A | FGC40137 | Y | Y | + | + | + | |||
9056177-G-C | 9218568-G-C | FGC40138 | Y | + | + | + | ||||
9880983-T-A | 10043374-T-A | FGC40139 | Y | Y | + | + | + | |||
13888070-C-A | 11767364-C-A | FGC80319 | Y | Y | + | + | + | |||
14217553-G-T | 12096847-G-T | FGC40140 | Y | Y | + | + | + | |||
14836635-G-A | 12724702-G-A | FGC80320 | Y | Y | + | + | + | |||
15336776-C-A | 13224894-C-A | FGC40141 | Y | Y | + | + | + | |||
15373188-T-A | 13261308-T-A | FGC40142 | Y | Y | + | + | + | |||
15713502-G-A | 13601622-G-A | Y18848 FGC40131 | Y | Y | + | + | + | |||
17120053-T-C | 15008173-T-C | FGC40143 | Y | Y | + | + | + | |||
17424804-C-T | 15312924-C-T | Z13760 | Y | Y | + | + | + | |||
17571047-G-T | 15459167-G-T | FGC40144 | Y | Y | + | + | + | |||
17816060-ATT-A | 15704180-ATT-A | + | ||||||||
17971607-C-T | 15859727-C-T | FGC40145 | Y | Y | + | + | + | |||
18163911-C-A | 16052031-C-A | FGC40146 | Y | Y | + | + | + | |||
19442873-G-C | 17330993-G-C | FGC40148 | Y | Y | + | + | + | |||
19468963-G-T | 17357083-G-T | FGC80321 | Y | Y | + | + | + | |||
19483753-C-CCA | 17371873-C-CCA | + | * | + | ||||||
22271294-G-T | 20109408-G-T | FGC40149 | DYZ19 | + | + | |||||
22459564-G-T | 20297678-G-T | BY43889 FGC80322 | DYZ19 | *** | + | |||||
22469616-G-T | 20307730-G-T | BY48623 FGC80323 | DYZ19 | + | + | + | ||||
22476962-T-A | 20315076-T-A | FGC40150 | DYZ19 | + | + | |||||
22525479-T-C | 20363593-T-C | FGC40151 | Y | + | + | + | ||||
22751613-T-G | 20589727-T-G | FGC40152 | Y | Y | + | + | + | |||
22815603-G-C | 20653717-G-C | FGC40153 | Y | Y | + | + | + | |||
23040818-A-AT | 20878932-A-AT | + | + | + | ||||||
23992544-G-A | 21846397-G-A | FGC40154 | + | + | + | |||||
24449571-A-T | 22303424-A-T | FGC80325 | Y | + | + | + | ||||
24521589-G-A | 22375442-G-A | FGC40155 | + | + | + | |||||
28461208-G-C | 26315061-G-C | FGC40156 | + | + | + | |||||
28804166-G-A | 26658019-G-A | BY151731 | + | + | ||||||
2914987-G-T | 3046946-G-T | FGC40133 | Y | ** | + | |||||
6967864-CT-C | 7099823-CT-C | + | + | |||||||
7172070-C-T | 7304029-C-T | BY63644 | Y | Y | + | + | ||||
10059834-G-C | 10222225-G-C | BY83404 | + | + | ||||||
13689935-G-A | 11534259-G-A | BY88607 | + | + | ||||||
14911795-G-A | 12799862-G-A | FT81933 | Y | Y | ** | + | ||||
16641821-GTA-G | 14529941-GTA-G | + | + | |||||||
18712715-C-T | 16600835-C-T | FGC40147 | Y | Y | + | + | ||||
22480375-C-A | 20318489-C-A | FGC80324 | DYZ19 | + | + | |||||
14720-G-T | + | |||||||||
3904292-T-C | 4036251-T-C | FT81270 | + | |||||||
4638705-C-T | 4770664-C-T | FT81402 | + | |||||||
4757038-A-G | 4888997-A-G | FT81422 | + | |||||||
4836422-A-G | 4968381-A-G | FT81430 | + | |||||||
6021133-C-T | 6153092-C-T | FT81650 | + | |||||||
6072582-G-A | 6204541-G-A | FT81659 | + | |||||||
9940693-C-G | 10103084-C-G | FT183072 | Y | + | ||||||
10056885-G-T | 10219276-G-T | FT426988 | + | |||||||
13875214-C-T | 11754508-C-T | FT81822 | Y | + | ||||||
14554954-C-T | 12443155-C-T | FT81913 | Y | + | ||||||
22302835-A-T | 20140949-A-T | DYZ19 | *** | * | ||||||
22320064-T-A | 20158178-T-A | DYZ19 | *** | * | * | |||||
6867824-C-CCCCCT | 6999783-C-CCCCCT | * | * | |||||||
6010403-A-C | 6142362-A-C | PF166 | ** | |||||||
7443490-A-G | 7575449-A-G | ** | ||||||||
25207822-C-CAAA | 23061675-C-CAAA | P2_r1 | 51×A | ** | ||||||
7038432-C-A | 7170391-C-A | ** | ||||||||
15050033-C-G | 12938124-C-G | ** | ||||||||
15050043-T-C | 12938134-T-C | ** | ||||||||
25207997-G-A | 23061850-G-A | P2_r1 | ** | |||||||
24884196-A-G | 22738049-A-G | g1 | ** | |||||||
28369980-T-A | 26223833-T-A | P1_gr2 | ** | |||||||
17538156-C-A | 15426276-C-A | ** | ||||||||
58996624-C-A | 56850477-C-A | ** | ||||||||
15146742-C-A | 13034829-C-A | ** | ||||||||
7110518-ATT-A | 7242477-ATT-A | 12×T | ** | |||||||
18439257-T-TG | 16327377-T-TG | P6_Dst | ** | |||||||
3345585-C-A | 3477544-C-A | ** | ||||||||
6938-A-G | ** | |||||||||
10020171-C-A | 10182562-C-A | ** | ||||||||
28369970-A-T | 26223823-A-T | P1_gr2 | ** | |||||||
2909260-G-T | 3041219-G-T | ** | ||||||||
7918448-A-AT | 8050407-A-AT | 9×T | ** | |||||||
28635218-C-A | 26489071-C-A | ** | ||||||||
10686671-C-T | ** | |||||||||
21299189-C-A | 19137303-C-A | ** | ||||||||
7650583-C-A | 7782542-C-A | ** | ||||||||
22164230-C-A | 20002344-C-A | ** | ||||||||
28369956-C-A | 26223809-C-A | P1_gr2 | ** | |||||||
17672065-C-A | 15560185-C-A | BY116529 | ** | |||||||
22816350-G-A | 20654464-G-A | ** | ||||||||
4540739-C-A | 4672698-C-A | ** | ||||||||
19129053-CTTTTTT-C | 17017173-CTTTTTT-C | 16×T | ** | |||||||
17369376-C-A | 15257496-C-A | ** | ||||||||
25592761-C-A | 23446614-C-A | P1_gr1 | ** | |||||||
10799595-C-A | ** | |||||||||
9125516-G-T | ** | |||||||||
9926741-C-A | 10089132-C-A | ** | ||||||||
14267111-CA-C | 12146405-CA-C | ** | ||||||||
14718411-C-A | 12606479-C-A | ** | ||||||||
10824051-C-A | ** | |||||||||
17300734-G-C | 15188854-G-C | ** | ||||||||
17310907-C-T | 15199027-C-T | ** | ||||||||
5358621-C-A | 5490580-C-A | ** | ||||||||
15770634-C-A | 13658754-C-A | ** | ||||||||
16968143-T-C | 14856263-T-C | ** | ||||||||
2685567-C-T | 2817526-C-T | ** | ||||||||
2718924-G-C | 2850883-G-C | ** | ||||||||
2729948-C-G | 2861907-C-G | ** | ||||||||
2730069-T-A | 2862028-T-A | ** | ||||||||
2759731-C-A | 2891690-C-A | ** | ||||||||
2770699-T-G | 2902658-T-G | ** | ||||||||
2770714-G-A | 2902673-G-A | ** | ||||||||
2770780-T-A | 2902739-T-A | ** | ||||||||
2773869-A-G | 2905828-A-G | ** | ||||||||
2926679-C-A | 3058638-C-A | ** | ||||||||
3032588-T-A | 3164547-T-A | ** | ||||||||
3073177-A-T | 3205136-A-T | ** | ||||||||
3103028-C-A | 3234987-C-A | ** | ||||||||
3103109-T-G | 3235068-T-G | ** | ||||||||
3131714-G-T | 3263673-G-T | ** | ||||||||
3170504-G-T | 3302463-G-T | ** | ||||||||
3272763-G-A | 3404722-G-A | ** | ||||||||
3279498-C-A | 3411457-C-A | FT21692 | FTB4729 | ** | ||||||
3399735-G-T | 3531694-G-T | ** | ||||||||
3545910-G-T | 3677869-G-T | ** | ||||||||
3559556-C-A | 3691515-C-A | ** | ||||||||
3559604-C-A | 3691563-C-A | ** | ||||||||
3591554-A-G | 3723513-A-G | ** | ||||||||
3681363-T-A | 3813322-T-A | ** | ||||||||
3695987-T-C | 3827946-T-C | ** | ||||||||
3833473-C-T | 3965432-C-T | ** | ||||||||
3833474-T-C | 3965433-T-C | FTA42515 | ** | |||||||
3835101-G-T | 3967060-G-T | ** | ||||||||
3850201-C-T | 3982160-C-T | ** | ||||||||
3862212-C-A | 3994171-C-A | ** | ||||||||
3889711-C-A | 4021670-C-A | ** | ||||||||
4022071-C-T | 4154030-C-T | ** | ||||||||
4032206-C-A | 4164165-C-A | ** | ||||||||
4215534-G-T | 4347493-G-T | ** | ||||||||
4262392-C-A | 4394351-C-A | ** | ||||||||
4302880-C-A | 4434839-C-A | ** | ||||||||
4316766-C-A | 4448725-C-A | ** | ||||||||
4351429-C-A | 4483388-C-A | ** | ||||||||
4672253-A-T | 4804212-A-T | ** | ||||||||
4788904-G-T | 4920863-G-T | ** | ||||||||
4872599-G-T | 5004558-G-T | ** | ||||||||
4873823-G-A | 5005782-G-A | ** | ||||||||
4888464-A-G | 5020423-A-G | ** | ||||||||
4918305-T-C | 5050264-T-C | ** | ||||||||
4970087-C-A | 5102046-C-A | ** | ||||||||
4996135-T-G | 5128094-T-G | ** | ||||||||
5059550-C-A | 5191509-C-A | ** | ||||||||
5081078-T-A | 5213037-T-A | ** | ||||||||
5125400-T-C | 5257359-T-C | ** | ||||||||
5215800-C-A | 5347759-C-A | ** | ||||||||
5221065-C-A | 5353024-C-A | ** | ||||||||
5369609-T-C | 5501568-T-C | ** | ||||||||
5393566-C-A | 5525525-C-A | ** | ||||||||
5445447-G-T | 5577406-G-T | ** | ||||||||
5445561-T-A | 5577520-T-A | ** | ||||||||
5495270-A-T | 5627229-A-T | ** | ||||||||
5503280-G-T | 5635239-G-T | ** | ||||||||
5542103-G-T | 5674062-G-T | ** | ||||||||
5587070-T-A | 5719029-T-A | ** | ||||||||
5609332-A-G | 5741291-A-G | ** | ||||||||
5674649-G-A | 5806608-G-A | ** | ||||||||
5690188-C-A | 5822147-C-A | ** | ||||||||
5691323-G-T | 5823282-G-T | ** | ||||||||
5727957-C-A | 5859916-C-A | ** | ||||||||
5772971-G-T | 5904930-G-T | ** | ||||||||
5778187-A-C | 5910146-A-C | ** | ||||||||
5937242-C-CTATATA | 6069201-C-CTATATA | 18×TA | ** | |||||||
5980376-T-C | 6112335-T-C | ** | ||||||||
6028229-A-G | 6160188-A-G | ** | ||||||||
6100464-C-A | 6232423-C-A | ** | ||||||||
6404815-G-T | 6536774-G-T | ** | ||||||||
6491404-C-A | 6623363-C-A | ** | ||||||||
6523917-C-T | 6655876-C-T | ** | ||||||||
6582304-T-A | 6714263-T-A | ** | ||||||||
6682281-T-C | 6814240-T-C | ** | ||||||||
6769937-C-A | 6901896-C-A | ** | ||||||||
6827782-C-A | 6959741-C-A | ** | ||||||||
6828600-T-C | 6960559-T-C | ** | ||||||||
6934618-G-A | 7066577-G-A | ** | ||||||||
6978243-C-A | 7110202-C-A | ** | ||||||||
7039292-G-A | 7171251-G-A | ** | ||||||||
7063392-C-A | 7195351-C-A | ** | ||||||||
7110503-T-C | 7242462-T-C | ** | ||||||||
7138311-C-A | 7270270-C-A | ** | ||||||||
7140638-C-G | 7272597-C-G | ** | ||||||||
7152793-C-A | 7284752-C-A | ** | ||||||||
7165450-G-T | 7297409-G-T | ** | ||||||||
7166237-G-T | 7298196-G-T | ** | ||||||||
7180136-A-G | 7312095-A-G | ** | ||||||||
7188264-C-A | 7320223-C-A | ** | ||||||||
7201489-C-A | 7333448-C-A | ** | ||||||||
7201542-T-G | 7333501-T-G | ** | ||||||||
7248570-C-A | 7380529-C-A | ** | ||||||||
7270309-A-C | 7402268-A-C | ** | ||||||||
7319806-C-A | 7451765-C-A | ** | ||||||||
7363915-A-T | 7495874-A-T | ** | ||||||||
7489129-C-G | 7621088-C-G | IR1_L | ** | |||||||
7774147-C-A | 7906106-C-A | ** | ||||||||
7821081-C-A | 7953040-C-A | ** | ||||||||
7829185-C-A | 7961144-C-A | ** | ||||||||
7861480-A-C | 7993439-A-C | ** | ||||||||
7996864-C-A | 8128823-C-A | ** | ||||||||
8002017-T-C | 8133976-T-C | ** | ||||||||
8002071-G-A | 8134030-G-A | ** | ||||||||
8293792-C-A | 8425751-C-A | ** | ||||||||
8296798-C-A | 8428757-C-A | ** | ||||||||
8697722-C-A | 8829681-C-A | ** | ||||||||
8698037-A-T | 8829996-A-T | ** | ||||||||
8698679-T-C | 8830638-T-C | ** | ||||||||
8856755-T-A | 8988714-T-A | ** | ||||||||
9025440-A-C | 9187831-A-C | ** | ||||||||
9034668-G-A | 9197059-G-A | ** | ||||||||
9040257-G-A | 9202648-G-A | ** | ||||||||
9077274-G-T | 9239665-G-T | ** | ||||||||
9117027-TA-T | 9279418-TA-T | ** | ||||||||
9385072-C-A | 9547463-C-A | ** | ||||||||
9416743-T-G | 9579134-T-G | ** | ** | |||||||
9437287-T-A | 9599678-T-A | ** | ||||||||
9482389-G-A | 9644780-G-A | ** | ||||||||
9602655-T-TA | 9765046-T-TA | IR3_Prx | ** | |||||||
9700691-C-A | 9863082-C-A | IR3_Prx | ** | |||||||
9700803-ATG-A | 9863194-ATG-A | IR3_Prx | ** | |||||||
10031183-CCCTAAAATTTAAA-C | 10193574-CCCTAAAATTTAAA-C | ** | ||||||||
10617629-C-A | ** | |||||||||
10659174-C-A | ** | |||||||||
10671619-C-A | ** | |||||||||
10686662-T-C | ** | |||||||||
10748384-G-T | ** | |||||||||
10748411-C-A | ** | |||||||||
10756995-G-C | ** | |||||||||
10762890-C-A | FTB55154 | ** | ||||||||
10773267-C-A | ** | |||||||||
10781237-C-A | ** | |||||||||
10786538-C-G | ** | |||||||||
10802156-C-G | ** | |||||||||
10802183-C-T | ** | |||||||||
10810918-A-T | ** | |||||||||
10826721-C-A | ** | |||||||||
10828828-C-T | FGC78347 | ** | ||||||||
10828838-C-A | ** | |||||||||
10831803-C-A | ** | |||||||||
10831811-C-A | ** | |||||||||
10836666-T-C | ** | |||||||||
10837865-C-G | ** | |||||||||
10842539-C-A | ** | |||||||||
10844598-C-T | FT219286 | ** | ||||||||
10857665-C-T | ** | |||||||||
10865863-C-A | ** | |||||||||
10867841-A-T | ** | |||||||||
10873462-C-A | ** | |||||||||
10890320-C-A | ** | |||||||||
10890381-C-A | ** | |||||||||
10894701-C-A | ** | |||||||||
10898899-G-T | ** | |||||||||
10904585-A-C | ** | |||||||||
10904592-A-C | ** | |||||||||
10904596-G-C | ** | |||||||||
10904614-A-G | ** | |||||||||
10904615-A-G | ** | |||||||||
10914619-C-G | ** | |||||||||
10914620-A-T | ** | |||||||||
10914642-A-G | ** | |||||||||
10914652-T-C | FGC80847 | ** | ||||||||
10914704-G-T | ** | |||||||||
10918303-A-T | ** | |||||||||
10925346-C-A | ** | |||||||||
10932437-G-C | ** | |||||||||
10932456-G-T | ** | |||||||||
10932458-C-T | ** | |||||||||
10932459-T-A | ** | |||||||||
10932511-A-T | ** | |||||||||
10932925-C-A | ** | |||||||||
10934093-C-A | ** | |||||||||
10938654-C-A | ** | |||||||||
10940655-C-G | ** | |||||||||
10943031-G-A | ** | |||||||||
10948327-A-G | ** | |||||||||
10948671-C-A | ** | |||||||||
10969743-C-T | ** | |||||||||
10969951-T-C | FT438604 | ** | ||||||||
10969961-T-C | ** | |||||||||
10971002-A-C | ** | |||||||||
10984121-C-A | ** | |||||||||
10988682-T-C | ** | |||||||||
11025820-C-A | ** | |||||||||
13202731-C-A | 11047055-C-A | ** | ||||||||
13209332-C-A | 11053656-C-A | ** | ||||||||
13218677-A-G | 11063001-A-G | ** | ||||||||
13225895-C-A | 11070219-C-A | ** | ||||||||
13254571-T-C | 11098895-T-C | ** | ||||||||
13257406-G-T | 11101730-G-T | ** | ||||||||
13295298-C-A | 11139622-C-A | ** | ||||||||
13295305-G-A | 11139629-G-A | 11×A | ** | |||||||
13311756-C-A | 11156080-C-A | ** | ||||||||
13394839-C-T | 11239163-C-T | 13×G | ** | |||||||
13446153-C-A | 11290477-C-A | ** | ||||||||
13457716-GATTCCATTCCATTCCATTCCATTCCATTCCATTCC-G | 11302040-GATTCCATTCCATTCCATTCCATTCCATTCCATTCC-G | 12×ATTCC | ** | |||||||
13460474-T-C | 11304798-T-C | ** | ||||||||
13460488-G-A | 11304812-G-A | ** | ||||||||
13494099-C-A | 11338423-C-A | ** | ||||||||
13512399-T-C | 11356723-T-C | ** | ||||||||
13521171-C-A | 11365495-C-A | ** | ||||||||
13544862-T-A | 11389186-T-A | ** | ||||||||
13574202-G-T | 11418526-G-T | ** | ||||||||
13596458-C-A | 11440782-C-A | ** | ||||||||
13598479-C-A | 11442803-C-A | ** | ||||||||
13601149-C-A | 11445473-C-A | ** | ||||||||
13606636-T-C | 11450960-T-C | ** | ||||||||
13630872-C-A | 11475196-C-A | ** | ||||||||
11648452-A-G | ** | |||||||||
11657468-G-T | ** | |||||||||
11670172-GA-G | ** | |||||||||
13858346-A-G | 11737640-A-G | ** | ||||||||
13861036-A-G | 11740330-A-G | ** | ||||||||
13880116-C-A | 11759410-C-A | ** | ||||||||
13893389-A-G | 11772683-A-G | ** | ||||||||
13898787-G-T | 11778081-G-T | ** | ||||||||
13899078-G-T | 11778372-G-T | ** | ||||||||
13901940-C-G | 11781234-C-G | ** | ||||||||
13940321-C-A | 11819615-C-A | FT53446 | ** | |||||||
14051738-G-T | 11931032-G-T | ** | ||||||||
14054054-C-A | 11933348-C-A | ** | ||||||||
14077085-C-G | 11956379-C-G | ** | ||||||||
14077091-C-A | 11956385-C-A | ** | ||||||||
14147046-A-G | 12026340-A-G | ** | ||||||||
14184403-G-A | 12063697-G-A | ** | ||||||||
14184411-G-A | 12063705-G-A | ** | ||||||||
14184415-G-A | 12063709-G-A | ** | ||||||||
14184418-T-A | 12063712-T-A | ** | ||||||||
14184421-T-C | 12063715-T-C | ** | ||||||||
14193048-T-A | 12072342-T-A | ** | ||||||||
14284818-A-G | 12164112-A-G | ** | ||||||||
14361924-C-A | 12241219-C-A | ** | ||||||||
14385219-A-G | 12264515-A-G | ** | ||||||||
14404865-G-C | 12284162-G-C | ** | ||||||||
14427373-C-A | 12306648-C-A | ** | ||||||||
14432156-TA-T | 12311429-TA-T | ** | ||||||||
14471794-C-A | 12351063-C-A | ** | ||||||||
14490779-C-A | 12370048-C-A | ** | ||||||||
14526540-C-A | 12414741-C-A | ** | ||||||||
14539182-C-A | 12427383-C-A | ** | ||||||||
14539394-A-T | 12427595-A-T | ** | ||||||||
14584696-C-T | 12472896-C-T | ** | ||||||||
14598630-A-T | 12486830-A-T | ** | ||||||||
14671151-C-A | 12559217-C-A | ** | ||||||||
14681332-G-T | 12569398-G-T | ** | ||||||||
14727319-ATTTTTT-A | 12615387-ATTTTTT-A | 23×T | ** | |||||||
14803016-A-C | 12691087-A-C | ** | ||||||||
14909481-C-A | 12797548-C-A | ** | ||||||||
14926461-TCAAAAA-T | 12814526-TCAAAAA-T | ** | ||||||||
15011770-G-A | 12899858-G-A | ** | ||||||||
15034933-G-T | 12923021-G-T | ** | ||||||||
15050023-T-C | 12938114-T-C | ** | ||||||||
15050039-A-G | 12938130-A-G | ** | ||||||||
15060585-C-T | 12948677-C-T | ** | ||||||||
15171384-C-A | 13059470-C-A | ** | ||||||||
15286025-C-A | 13174124-C-A | ** | ||||||||
15321368-C-T | 13209486-C-T | ** | ||||||||
15386392-C-A | 13274512-C-A | ** | ||||||||
15495390-C-A | 13383510-C-A | ** | ||||||||
15653635-T-A | 13541755-T-A | ** | ||||||||
15677224-T-C | 13565344-T-C | ** | ||||||||
15732864-T-C | 13620984-T-C | ** | ||||||||
15743136-A-G | 13631256-A-G | ** | ||||||||
15785914-C-T | 13674034-C-T | ** | ||||||||
15788161-T-A | 13676281-T-A | ** | ||||||||
15821452-T-C | 13709572-T-C | ** | ||||||||
15821453-G-A | 13709573-G-A | ** | ||||||||
15834971-G-T | 13723091-G-T | ** | ||||||||
15841879-C-A | 13729999-C-A | ** | ||||||||
15842644-C-T | 13730764-C-T | ** | ||||||||
15842773-G-T | 13730893-G-T | ** | ||||||||
15842774-A-G | 13730894-A-G | ** | ||||||||
15842794-C-G | 13730914-C-G | ** | ||||||||
15866175-G-A | 13754295-G-A | ** | ||||||||
15909380-C-A | 13797500-C-A | ** | ||||||||
16002277-G-A | 13890397-G-A | ** | ||||||||
16007992-A-C | 13896112-A-C | ** | ||||||||
16039115-C-A | 13927235-C-A | ** | ||||||||
16046833-C-A | 13934953-C-A | ** | ||||||||
16059011-A-C | 13947131-A-C | ** | ||||||||
16059014-G-T | 13947134-G-T | ** | ||||||||
16059018-A-T | 13947138-A-T | ** | ||||||||
16075881-C-A | 13964001-C-A | ** | ||||||||
16147495-AG-A | 14035615-AG-A | P8_Dst | ** | |||||||
16147890-A-AG | 14036010-A-AG | P8_Dst | ** | |||||||
16336935-C-A | 14225055-C-A | ** | ||||||||
16465889-C-T | 14354009-C-T | ** | ||||||||
16492474-C-A | 14380594-C-A | ** | ||||||||
16539739-C-A | 14427859-C-A | ** | ||||||||
16551074-T-C | 14439194-T-C | ** | ||||||||
16598980-TCAAC-T | 14487100-TCAAC-T | ** | ||||||||
16688357-G-T | 14576477-G-T | ** | ||||||||
16704406-C-A | 14592526-C-A | ** | ||||||||
16738638-T-A | 14626758-T-A | ** | ||||||||
16743025-C-A | 14631145-C-A | ** | ||||||||
16747533-A-G | 14635653-A-G | ** | ||||||||
16938210-T-C | 14826330-T-C | ** | ||||||||
16938219-T-C | 14826339-T-C | ** | ||||||||
16987172-G-A | 14875292-G-A | ** | ||||||||
16987198-T-A | 14875318-T-A | ** | ||||||||
16993369-A-G | 14881489-A-G | ** | ||||||||
16997562-A-T | 14885682-A-T | ** | ||||||||
17042817-C-A | 14930937-C-A | ** | ||||||||
17158989-TTTTTTG-T | 15047109-TTTTTTG-T | ** | ||||||||
17164229-T-A | 15052349-T-A | ** | ||||||||
17177126-C-A | 15065246-C-A | ** | ||||||||
17369368-T-C | 15257488-T-C | ** | ||||||||
17375707-G-T | 15263827-G-T | ** | ||||||||
17470842-T-C | 15358962-T-C | ** | ||||||||
17492035-C-T | 15380155-C-T | ** | ||||||||
17702273-C-T | 15590393-C-T | ** | ||||||||
17702284-A-T | 15590404-A-T | ** | ||||||||
17753817-T-C | 15641937-T-C | ** | ||||||||
17903458-C-A | 15791578-C-A | ** | ||||||||
17995024-G-A | 15883144-G-A | P7_Prx | ** | |||||||
18007174-C-A | 15895294-C-A | P7_Gap | ** | |||||||
18059776-T-C | 15947896-T-C | ** | ||||||||
18071643-T-A | 15959763-T-A | ** | ||||||||
18611783-C-A | 16499903-C-A | ** | ||||||||
18630815-C-T | 16518935-C-T | ** | ||||||||
18630825-T-C | 16518945-T-C | ** | ||||||||
18630829-T-C | 16518949-T-C | ** | ||||||||
18630831-A-G | 16518951-A-G | ** | ||||||||
18707992-C-A | 16596112-C-A | ** | ||||||||
18737634-C-A | 16625754-C-A | ** | ||||||||
18768432-T-A | 16656552-T-A | ** | ||||||||
18780465-C-A | 16668585-C-A | ** | ||||||||
18796627-A-C | 16684747-A-C | ** | ||||||||
18838826-G-A | 16726946-G-A | ** | ||||||||
18933771-C-A | 16821891-C-A | ** | ||||||||
18955801-G-A | 16843921-G-A | ** | ||||||||
18955852-C-A | 16843972-C-A | ** | ||||||||
18976520-C-A | 16864640-C-A | ** | ||||||||
19052403-A-C | 16940523-A-C | ** | ||||||||
19053232-C-T | 16941352-C-T | ** | ||||||||
19078935-C-A | 16967055-C-A | ** | ||||||||
19125689-CGT-C | 17013809-CGT-C | ** | ||||||||
19155981-C-A | 17044101-C-A | ** | ||||||||
19299432-C-A | 17187552-C-A | FT240353 | ** | |||||||
19304673-C-A | 17192793-C-A | ** | ||||||||
19438567-GGGAA-G | 17326687-GGGAA-G | ** | ||||||||
19449301-C-A | 17337421-C-A | ** | ||||||||
19799989-C-A | 17688109-C-A | P5_Prx | ** | |||||||
19963832-A-ATATT | 17851952-A-ATATT | P5_Prx | ** | |||||||
20376731-C-A | 18214845-C-A | P5_Dst | ** | |||||||
20376806-CT-C | 18214920-CT-C | P5_Dst | ** | |||||||
20569381-C-A | 18407495-C-A | P5_Dst | ** | |||||||
20640930-G-GAA | 18479044-G-GAA | P4_Prx | 14×A | ** | ||||||
21014998-T-C | 18853112-T-C | P4_Dst | ** | |||||||
21015060-A-AGG | 18853174-A-AGG | P4_Dst | ** | |||||||
21138629-C-G | 18976743-C-G | ** | ||||||||
21238268-C-T | 19076382-C-T | ** | ||||||||
21253889-C-A | 19092003-C-A | ** | ||||||||
21352928-C-A | 19191042-C-A | ** | ||||||||
21427201-C-A | 19265315-C-A | ** | ||||||||
21457198-C-A | 19295312-C-A | ** | ||||||||
21459604-C-A | 19297718-C-A | ** | ||||||||
21462609-C-G | 19300723-C-G | ** | ||||||||
21476473-C-A | 19314587-C-A | ** | ||||||||
21554334-G-A | 19392448-G-A | FT2186 | ** | |||||||
21603933-C-A | 19442047-C-A | ** | ||||||||
21738744-T-C | 19576858-T-C | ** | ||||||||
21807042-T-A | 19645156-T-A | ** | ||||||||
21850254-G-T | 19688368-G-T | ** | ||||||||
21949120-C-T | 19787234-C-T | ** | ||||||||
21983997-C-A | 19822111-C-A | ** | ||||||||
21996235-G-T | 19834349-G-T | ** | ||||||||
22055238-T-C | 19893352-T-C | ** | ||||||||
22132410-C-A | 19970524-C-A | ** | ||||||||
22134025-C-A | 19972139-C-A | ** | ||||||||
22170294-A-T | 20008408-A-T | ** | ||||||||
22215008-T-A | 20053122-T-A | ** | ||||||||
22602304-C-A | 20440418-C-A | ** | ||||||||
22851672-C-A | 20689786-C-A | ** | ||||||||
22997463-C-T | 20835577-C-T | ** | ||||||||
23261276-T-G | 21099390-T-G | ** | ||||||||
23293596-GTGTATATATATA-G | 21131710-GTGTATATATATA-G | ** | ||||||||
23293619-T-G | 21131733-T-G | ** | ||||||||
23411310-C-A | 21249424-C-A | ** | ||||||||
23512380-A-C | 21350494-A-C | ** | ||||||||
23522584-C-A | 21360698-C-A | ** | ||||||||
23602163-C-T | 21440277-C-T | ** | ||||||||
23808796-C-A | 21646910-C-A | ** | ||||||||
23875213-A-G | 21713327-A-G | ** | ||||||||
23875282-G-C | 21713396-G-C | ** | ||||||||
23981912-C-A | 21835765-C-A | ** | ||||||||
23997265-C-A | 21851118-C-A | FGC44757 | ** | |||||||
24127453-A-C | 21981306-A-C | P3_b1 | ** | |||||||
24298896-C-CAA | 22152749-C-CAA | P3_t1 | ** | |||||||
24475088-C-A | 22328941-C-A | ** | ||||||||
24910931-T-A | 22764784-T-A | g1 | ** | |||||||
26060204-A-G | 23914057-A-G | P1_Y1 | ** | |||||||
26154009-A-T | 24007862-A-T | P1_Y1 | ** | |||||||
26355498-C-A | 24209351-C-A | P1_Y1 | ** | |||||||
26391572-T-C | 24245425-T-C | P1_Y1 | ** | |||||||
26391579-T-A | 24245432-T-A | P1_Y1 | ** | |||||||
26415627-A-G | 24269480-A-G | P1_Y1 | ** | |||||||
26415676-CAAAAA-C | 24269529-CAAAAA-C | P1_Y1 | 20×A | ** | ||||||
27521992-G-T | 25375845-G-T | P1_Y2 | ** | |||||||
27576128-T-C | 25429981-T-C | P1_Y2 | ** | |||||||
27595818-C-T | 25449671-C-T | P1_Y2 | ** | |||||||
27636256-G-T | 25490109-G-T | P1_Y2 | ** | |||||||
27971701-C-A | 25825554-C-A | P1_Y2 | ** | |||||||
28147159-CA-C | 26001012-CA-C | P1_b4 | ** | |||||||
28369966-T-C | 26223819-T-C | P1_gr2 | ** | |||||||
28438144-T-A | 26291997-T-A | P1_gr2 | ** | |||||||
28484326-C-A | 26338179-C-A | ** | ||||||||
28605954-C-A | 26459807-C-A | ** | ||||||||
28609570-GA-G | 26463423-GA-G | ** | ||||||||
28609582-G-T | 26463435-G-T | ** | ||||||||
28609587-G-T | 26463440-G-T | ** | ||||||||
28609589-C-T | 26463442-C-T | ** | ||||||||
28640447-C-A | 26494300-C-A | ** | ||||||||
28716402-C-A | 26570255-C-A | ** | ||||||||
28724194-TG-T | 26578047-TG-T | ** | ||||||||
28725983-C-A | 26579836-C-A | ** | ||||||||
28745111-C-A | 26598964-C-A | ** | ||||||||
56823322-A-G | ** | |||||||||
56823337-C-A | ** | |||||||||
56863043-T-A | ** | |||||||||
13564588-C-G | 11408912-C-G | ** | ||||||||
18370353-T-G | 16258473-T-G | P6_Prx | ** | |||||||
26010720-C-A | 23864573-C-A | P1_Y1 | ** | |||||||
27982169-CATTATT-C | 25836022-CATTATT-C | P1_Y2 | 10×ATT | ** | ||||||
25198319-C-CT | 23052172-C-CT | g1 | 14×T | *** | ||||||
22489633-G-T | 20327747-G-T | DYZ19 | *** | |||||||
19668775-C-A | 17556895-C-A | P5_Prx | *** | |||||||
13433618-TT-A | 11277942-TT-A | *** | ||||||||
22507686-T-A | 20345800-T-A | DYZ19 | *** | |||||||
25472735-C-A | 23326588-C-A | P2_r2 | 23×A | *** | ||||||
27791947-T-G | 25645800-T-G | P1_Y2 | *** | |||||||
10025908-A-G | 10188299-A-G | *** | ||||||||
10025922-G-A | 10188313-G-A | *** | ||||||||
13447090-ACCATTCTATTACTTT-A | 11291414-ACCATTCTATTACTTT-A | *** | ||||||||
13450176-CCATTG-C,CCATTC | 11294500-CCATTG-C,CCATTC | *** | ||||||||
13454804-TTCTAC-T | 11299128-TTCTAC-T | *** | ||||||||
13459103-T-TTCCCC | 11303427-T-TTCCCC | *** | ||||||||
13700464-T-G | 11544788-T-G | *** | ||||||||
13714333-ATTGAT-A | 11558657-ATTGAT-A | *** | ||||||||
13714341-A-G | 11558665-A-G | *** | ||||||||
13737177-TCGAAC-T | 11581501-TCGAAC-T | *** | ||||||||
13830225-GA-G | 11709519-GA-G | *** | ||||||||
13830229-G-T | 11709523-G-T | *** | ||||||||
13845541-A-AAATGGAATGG,G | 11724835-A-AAATGGAATGG,G | 8×AATGG | *** | |||||||
13860119-T-C | 11739413-T-C | *** | ||||||||
13860121-A-G | 11739415-A-G | *** | ||||||||
13860122-A-T | 11739416-A-T | *** | ||||||||
13860129-G-A | 11739423-G-A | *** | ||||||||
17802196-AG-A | 15690316-AG-A | *** | ||||||||
18982584-AAAG-A,AAAA | 16870704-AAAG-A,AAAA | *** | ||||||||
22244790-T-G | 20082904-T-G | FGC71298 | DYZ19 | *** | ||||||
22244796-T-A | 20082910-T-A | DYZ19 | *** | |||||||
22244809-A-T | 20082923-A-T | BY38900 | DYZ19 | *** | ||||||
22244822-T-C | 20082936-T-C | DYZ19 | *** | |||||||
22244859-G-C | 20082973-G-C | DYZ19 | *** | |||||||
22244863-T-A | 20082977-T-A | DYZ19 | *** | |||||||
22284220-C-G | 20122334-C-G | DYZ19 | *** | |||||||
22296760-G-A | 20134874-G-A | DYZ19 | *** | |||||||
22313402-C-G | 20151516-C-G | DYZ19 | *** | |||||||
22451768-C-T | 20289882-C-T | DYZ19 | *** | |||||||
24095697-T-A | 21949550-T-A | P3_b1 | *** | |||||||
24100709-T-C | 21954562-T-C | P3_b1 | *** | |||||||
24138899-A-G | 21992752-A-G | P3_b1 | *** | |||||||
24834707-T-C | 22688560-T-C | P3_b2 | *** | |||||||
24914282-A-G | 22768135-A-G | g1 | *** | |||||||
24953782-T-A | 22807635-T-A | g1 | *** | |||||||
25250508-T-C | 23104361-T-C | P2_r1 | *** | |||||||
25333853-AC-A | 23187706-AC-A | P2_r1 | *** | |||||||
26991333-T-TAAAA | 24845186-T-TAAAA | P1_r4 | 33×A | *** | ||||||
27791941-T-G | 25645794-T-G | P1_Y2 | *** | |||||||
58973226-G-T | 56827079-G-T | *** | ||||||||
13455784-AAGTCCATTCT-A,C | 11300108-AAGTCCATTCT-A,C | *** | ||||||||
13856276-A-AGGAAT | 11735570-A-AGGAAT | *** | ||||||||
13455624-CACTCGGGTTG-C | 11299948-CACTCGGGTTG-C | *** | ||||||||
13864550-T-A,G | 11743844-T-A,G | *** | ||||||||
13686912-C-A,CGAATG | 11531236-C-A,CGAATG | 10×GAATG | *** | |||||||
13842631-C-G,T | 11721925-C-G,T | *** | ||||||||
13462355-C-T | 11306679-C-T | *** | ||||||||
2718901-TTG-T | 2850860-TTG-T | *** | ||||||||
2833178-CTTTT-C,CTTT | 2965137-CTTTT-C,CTTT | 19×T | *** | |||||||
5449442-G-T | 5581401-G-T | FT419968 | *** | |||||||
5644733-T-C | 5776692-T-C | *** | ||||||||
5864496-C-A | 5996455-C-A | *** | ||||||||
5864663-C-A | 5996622-C-A | *** | ||||||||
7704481-C-A | 7836440-C-A | *** | ||||||||
9014283-C-A | 9176674-C-A | *** | ||||||||
9385062-C-A | 9547453-C-A | *** | ||||||||
10791092-G-T | *** | |||||||||
10838980-C-A | *** | |||||||||
10842499-C-A | *** | |||||||||
10892631-T-C | *** | |||||||||
10940601-A-T | *** | |||||||||
10940626-G-A | *** | |||||||||
10946948-CTCCAT-C | *** | |||||||||
10949492-C-A | *** | |||||||||
13435136-C-A | 11279460-C-A | *** | ||||||||
11672626-G-A | *** | |||||||||
14324921-GA-G | 12204215-GA-G | *** | ||||||||
16702028-T-C | 14590148-T-C | *** | ||||||||
17885853-G-T | 15773973-G-T | *** | ||||||||
21156829-C-T | 18994943-C-T | *** | ||||||||
23625448-A-G | 21463562-A-G | *** | ||||||||
23759112-CT-A | 21597226-CT-A | *** | ||||||||
23838957-G-A | 21677071-G-A | *** | ||||||||
21754394-G-T | *** | |||||||||
56828189-C-T | *** | |||||||||
56832841-TGCCAG-T,TGCCAC | *** | |||||||||
3201648-G-GA | 3333607-G-GA | 10×A | *** | |||||||
9956378-A-AAG | 10118769-A-AAG | 8×AAG | *** | |||||||
7383851-CAAAAAAA-C | 7515810-CAAAAAAA-C | 24×A | *** | |||||||
6929132-CTTTTT-C | 7061091-CTTTTT-C | 26×T | *** | |||||||
16475324-CGGG-C,CGGGG | 14363444-CGGG-C,CGGGG | 11×G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.