Big Tree: Person Data

Tree Position

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Blocks	Names	Region	McDonald BED	combBED	STR	FTDNA 227117	BigY2 227117	BigY3 227117
25617956-A-G	23471809-A-G			P1_gr1						A+
9474412-G-T	9636803-G-T									A+
20386823-G-C	18224937-G-C			P5_Dst						A+
6392390-C-A	6524349-C-A							***	A*	A*
19712624-G-A	17600744-G-A			P5_Prx				***	A*	A*
19792957-C-G	17681077-C-G			P5_Prx				***	A*	A*
19875340-G-A	17763460-G-A			P5_Prx				***	A*	A*
22231549-G-C	20069663-G-C			DYZ19				***	A*
24282790-C-T	22136643-C-T			P3_t1					A*	A*
26142862-G-A	23996715-G-A			P1_Y1					A*	A*
20323695-C-CT	18161809-C-CT			P5_Dst			9×T			A*
19655006-G-T	17543126-G-T			P5_Prx						A*
19685735-G-A	17573855-G-A			P5_Prx						A*
20627858-C-G	18465972-C-G			P4_Prx						A*
20720061-G-T	18558175-G-T			P4_Prx						A*
20924113-C-A	18762227-C-A			P4_Dst						A*
26330369-G-T	24184222-G-T			P1_Y1						A*
27632064-C-A	25485917-C-A			P1_Y2						A*
2807024-TTATATATATATATATATATATATATA-T	2938983-TTATATATATATATATATATATATATA-T						20×TA	+	+	+
2877789-G-A	3009748-G-A		FGC40132		Y	Y		+	+	+
4925615-T-C	5057574-T-C		FGC80315					+	+	+
6593928-G-C	6725887-G-C		FGC40134					+	+	+
6931120-G-C	7063079-G-C		FGC80316		Y	Y		+	+	+
7216931-T-G	7348890-T-G		FGC40135		Y	Y		+	+	+
7222426-T-C	7354385-T-C		FGC80317		Y			**	+	+
7583951-T-C	7715910-T-C		FGC40136		Y	Y		+	+	+
8381040-T-A	8512999-T-A		FGC40137		Y	Y		+	+	+
9056177-G-C	9218568-G-C		FGC40138			Y		+	+	+
9880983-T-A	10043374-T-A		FGC40139		Y	Y		+	+	+
13888070-C-A	11767364-C-A		FGC80319		Y	Y		+	+	+
14217553-G-T	12096847-G-T		FGC40140		Y	Y		+	+	+
14836635-G-A	12724702-G-A		FGC80320		Y	Y		+	+	+
15336776-C-A	13224894-C-A		FGC40141		Y	Y		+	+	+
15373188-T-A	13261308-T-A		FGC40142		Y	Y		+	+	+
15713502-G-A	13601622-G-A		Y18848 FGC40131		Y	Y		+	+	+
17120053-T-C	15008173-T-C		FGC40143		Y	Y		+	+	+
17424804-C-T	15312924-C-T		Z13760		Y	Y		+	+	+
17571047-G-T	15459167-G-T		FGC40144		Y	Y		+	+	+
17816060-ATT-A	15704180-ATT-A							+
17971607-C-T	15859727-C-T		FGC40145		Y	Y		+	+	+
18163911-C-A	16052031-C-A		FGC40146		Y	Y		+	+	+
19442873-G-C	17330993-G-C		FGC40148		Y	Y		+	+	+
19468963-G-T	17357083-G-T		FGC80321		Y	Y		+	+	+
19483753-C-CCA	17371873-C-CCA							+	*	+
22271294-G-T	20109408-G-T		FGC40149	DYZ19				+	+
22459564-G-T	20297678-G-T		BY43889 FGC80322	DYZ19				***	+
22469616-G-T	20307730-G-T		BY48623 FGC80323	DYZ19				+	+	+
22476962-T-A	20315076-T-A		FGC40150	DYZ19				+	+
22525479-T-C	20363593-T-C		FGC40151		Y			+	+	+
22751613-T-G	20589727-T-G		FGC40152		Y	Y		+	+	+
22815603-G-C	20653717-G-C		FGC40153		Y	Y		+	+	+
23040818-A-AT	20878932-A-AT							+	+	+
23992544-G-A	21846397-G-A		FGC40154					+	+	+
24449571-A-T	22303424-A-T		FGC80325			Y		+	+	+
24521589-G-A	22375442-G-A		FGC40155					+	+	+
28461208-G-C	26315061-G-C		FGC40156					+	+	+
28804166-G-A	26658019-G-A		BY151731						+	+
2914987-G-T	3046946-G-T		FGC40133		Y				**	+
6967864-CT-C	7099823-CT-C								+	+
7172070-C-T	7304029-C-T		BY63644		Y	Y			+	+
10059834-G-C	10222225-G-C		BY83404						+	+
13689935-G-A	11534259-G-A		BY88607						+	+
14911795-G-A	12799862-G-A		FT81933		Y	Y			**	+
16641821-GTA-G	14529941-GTA-G								+	+
18712715-C-T	16600835-C-T		FGC40147		Y	Y			+	+
22480375-C-A	20318489-C-A		FGC80324	DYZ19					+	+
	14720-G-T								+
3904292-T-C	4036251-T-C		FT81270							+
4638705-C-T	4770664-C-T		FT81402							+
4757038-A-G	4888997-A-G		FT81422							+
4836422-A-G	4968381-A-G		FT81430							+
6021133-C-T	6153092-C-T		FT81650							+
6072582-G-A	6204541-G-A		FT81659							+
9940693-C-G	10103084-C-G		FT183072		Y					+
10056885-G-T	10219276-G-T		FT426988							+
13875214-C-T	11754508-C-T		FT81822		Y					+
14554954-C-T	12443155-C-T		FT81913		Y					+
22302835-A-T	20140949-A-T			DYZ19				***	*
22320064-T-A	20158178-T-A			DYZ19				***	*	*
6867824-C-CCCCCT	6999783-C-CCCCCT								*	*
6010403-A-C	6142362-A-C		PF166					**
7443490-A-G	7575449-A-G							**
25207822-C-CAAA	23061675-C-CAAA			P2_r1			51×A	**
7038432-C-A	7170391-C-A								**
15050033-C-G	12938124-C-G								**
15050043-T-C	12938134-T-C								**
25207997-G-A	23061850-G-A			P2_r1					**
24884196-A-G	22738049-A-G			g1					**
28369980-T-A	26223833-T-A			P1_gr2					**
17538156-C-A	15426276-C-A								**
58996624-C-A	56850477-C-A								**
15146742-C-A	13034829-C-A								**
7110518-ATT-A	7242477-ATT-A						12×T		**
18439257-T-TG	16327377-T-TG			P6_Dst					**
3345585-C-A	3477544-C-A								**
	6938-A-G								**
10020171-C-A	10182562-C-A								**
28369970-A-T	26223823-A-T			P1_gr2					**
2909260-G-T	3041219-G-T								**
7918448-A-AT	8050407-A-AT						9×T		**
28635218-C-A	26489071-C-A								**
	10686671-C-T								**
21299189-C-A	19137303-C-A								**
7650583-C-A	7782542-C-A								**
22164230-C-A	20002344-C-A								**
28369956-C-A	26223809-C-A			P1_gr2					**
17672065-C-A	15560185-C-A		BY116529						**
22816350-G-A	20654464-G-A								**
4540739-C-A	4672698-C-A								**
19129053-CTTTTTT-C	17017173-CTTTTTT-C						16×T		**
17369376-C-A	15257496-C-A								**
25592761-C-A	23446614-C-A			P1_gr1					**
	10799595-C-A								**
	9125516-G-T								**
9926741-C-A	10089132-C-A								**
14267111-CA-C	12146405-CA-C								**
14718411-C-A	12606479-C-A								**
	10824051-C-A								**
17300734-G-C	15188854-G-C								**
17310907-C-T	15199027-C-T								**
5358621-C-A	5490580-C-A								**
15770634-C-A	13658754-C-A								**
16968143-T-C	14856263-T-C								**
2685567-C-T	2817526-C-T								**
2718924-G-C	2850883-G-C								**
2729948-C-G	2861907-C-G								**
2730069-T-A	2862028-T-A								**
2759731-C-A	2891690-C-A								**
2770699-T-G	2902658-T-G								**
2770714-G-A	2902673-G-A								**
2770780-T-A	2902739-T-A								**
2773869-A-G	2905828-A-G								**
2926679-C-A	3058638-C-A								**
3032588-T-A	3164547-T-A								**
3073177-A-T	3205136-A-T								**
3103028-C-A	3234987-C-A								**
3103109-T-G	3235068-T-G								**
3131714-G-T	3263673-G-T								**
3170504-G-T	3302463-G-T								**
3272763-G-A	3404722-G-A								**
3279498-C-A	3411457-C-A	FT21692	FTB4729						**
3399735-G-T	3531694-G-T								**
3545910-G-T	3677869-G-T								**
3559556-C-A	3691515-C-A								**
3559604-C-A	3691563-C-A								**
3591554-A-G	3723513-A-G								**
3681363-T-A	3813322-T-A								**
3695987-T-C	3827946-T-C								**
3833473-C-T	3965432-C-T								**
3833474-T-C	3965433-T-C		FTA42515						**
3835101-G-T	3967060-G-T								**
3850201-C-T	3982160-C-T								**
3862212-C-A	3994171-C-A								**
3889711-C-A	4021670-C-A								**
4022071-C-T	4154030-C-T								**
4032206-C-A	4164165-C-A								**
4215534-G-T	4347493-G-T								**
4262392-C-A	4394351-C-A								**
4302880-C-A	4434839-C-A								**
4316766-C-A	4448725-C-A								**
4351429-C-A	4483388-C-A								**
4672253-A-T	4804212-A-T								**
4788904-G-T	4920863-G-T								**
4872599-G-T	5004558-G-T								**
4873823-G-A	5005782-G-A								**
4888464-A-G	5020423-A-G								**
4918305-T-C	5050264-T-C								**
4970087-C-A	5102046-C-A								**
4996135-T-G	5128094-T-G								**
5059550-C-A	5191509-C-A								**
5081078-T-A	5213037-T-A								**
5125400-T-C	5257359-T-C								**
5215800-C-A	5347759-C-A								**
5221065-C-A	5353024-C-A								**
5369609-T-C	5501568-T-C								**
5393566-C-A	5525525-C-A								**
5445447-G-T	5577406-G-T								**
5445561-T-A	5577520-T-A								**
5495270-A-T	5627229-A-T								**
5503280-G-T	5635239-G-T								**
5542103-G-T	5674062-G-T								**
5587070-T-A	5719029-T-A								**
5609332-A-G	5741291-A-G								**
5674649-G-A	5806608-G-A								**
5690188-C-A	5822147-C-A								**
5691323-G-T	5823282-G-T								**
5727957-C-A	5859916-C-A								**
5772971-G-T	5904930-G-T								**
5778187-A-C	5910146-A-C								**
5937242-C-CTATATA	6069201-C-CTATATA						18×TA		**
5980376-T-C	6112335-T-C								**
6028229-A-G	6160188-A-G								**
6100464-C-A	6232423-C-A								**
6404815-G-T	6536774-G-T								**
6491404-C-A	6623363-C-A								**
6523917-C-T	6655876-C-T								**
6582304-T-A	6714263-T-A								**
6682281-T-C	6814240-T-C								**
6769937-C-A	6901896-C-A								**
6827782-C-A	6959741-C-A								**
6828600-T-C	6960559-T-C								**
6934618-G-A	7066577-G-A								**
6978243-C-A	7110202-C-A								**
7039292-G-A	7171251-G-A								**
7063392-C-A	7195351-C-A								**
7110503-T-C	7242462-T-C								**
7138311-C-A	7270270-C-A								**
7140638-C-G	7272597-C-G								**
7152793-C-A	7284752-C-A								**
7165450-G-T	7297409-G-T								**
7166237-G-T	7298196-G-T								**
7180136-A-G	7312095-A-G								**
7188264-C-A	7320223-C-A								**
7201489-C-A	7333448-C-A								**
7201542-T-G	7333501-T-G								**
7248570-C-A	7380529-C-A								**
7270309-A-C	7402268-A-C								**
7319806-C-A	7451765-C-A								**
7363915-A-T	7495874-A-T								**
7489129-C-G	7621088-C-G			IR1_L					**
7774147-C-A	7906106-C-A								**
7821081-C-A	7953040-C-A								**
7829185-C-A	7961144-C-A								**
7861480-A-C	7993439-A-C								**
7996864-C-A	8128823-C-A								**
8002017-T-C	8133976-T-C								**
8002071-G-A	8134030-G-A								**
8293792-C-A	8425751-C-A								**
8296798-C-A	8428757-C-A								**
8697722-C-A	8829681-C-A								**
8698037-A-T	8829996-A-T								**
8698679-T-C	8830638-T-C								**
8856755-T-A	8988714-T-A								**
9025440-A-C	9187831-A-C								**
9034668-G-A	9197059-G-A								**
9040257-G-A	9202648-G-A								**
9077274-G-T	9239665-G-T								**
9117027-TA-T	9279418-TA-T								**
9385072-C-A	9547463-C-A								**
9416743-T-G	9579134-T-G								**	**
9437287-T-A	9599678-T-A								**
9482389-G-A	9644780-G-A								**
9602655-T-TA	9765046-T-TA			IR3_Prx					**
9700691-C-A	9863082-C-A			IR3_Prx					**
9700803-ATG-A	9863194-ATG-A			IR3_Prx					**
10031183-CCCTAAAATTTAAA-C	10193574-CCCTAAAATTTAAA-C								**
	10617629-C-A								**
	10659174-C-A								**
	10671619-C-A								**
	10686662-T-C								**
	10748384-G-T								**
	10748411-C-A								**
	10756995-G-C								**
	10762890-C-A		FTB55154						**
	10773267-C-A								**
	10781237-C-A								**
	10786538-C-G								**
	10802156-C-G								**
	10802183-C-T								**
	10810918-A-T								**
	10826721-C-A								**
	10828828-C-T		FGC78347						**
	10828838-C-A								**
	10831803-C-A								**
	10831811-C-A								**
	10836666-T-C								**
	10837865-C-G								**
	10842539-C-A								**
	10844598-C-T		FT219286						**
	10857665-C-T								**
	10865863-C-A								**
	10867841-A-T								**
	10873462-C-A								**
	10890320-C-A								**
	10890381-C-A								**
	10894701-C-A								**
	10898899-G-T								**
	10904585-A-C								**
	10904592-A-C								**
	10904596-G-C								**
	10904614-A-G								**
	10904615-A-G								**
	10914619-C-G								**
	10914620-A-T								**
	10914642-A-G								**
	10914652-T-C		FGC80847						**
	10914704-G-T								**
	10918303-A-T								**
	10925346-C-A								**
	10932437-G-C								**
	10932456-G-T								**
	10932458-C-T								**
	10932459-T-A								**
	10932511-A-T								**
	10932925-C-A								**
	10934093-C-A								**
	10938654-C-A								**
	10940655-C-G								**
	10943031-G-A								**
	10948327-A-G								**
	10948671-C-A								**
	10969743-C-T								**
	10969951-T-C		FT438604						**
	10969961-T-C								**
	10971002-A-C								**
	10984121-C-A								**
	10988682-T-C								**
	11025820-C-A								**
13202731-C-A	11047055-C-A								**
13209332-C-A	11053656-C-A								**
13218677-A-G	11063001-A-G								**
13225895-C-A	11070219-C-A								**
13254571-T-C	11098895-T-C								**
13257406-G-T	11101730-G-T								**
13295298-C-A	11139622-C-A								**
13295305-G-A	11139629-G-A						11×A		**
13311756-C-A	11156080-C-A								**
13394839-C-T	11239163-C-T						13×G		**
13446153-C-A	11290477-C-A								**
13457716-GATTCCATTCCATTCCATTCCATTCCATTCCATTCC-G	11302040-GATTCCATTCCATTCCATTCCATTCCATTCCATTCC-G						12×ATTCC		**
13460474-T-C	11304798-T-C								**
13460488-G-A	11304812-G-A								**
13494099-C-A	11338423-C-A								**
13512399-T-C	11356723-T-C								**
13521171-C-A	11365495-C-A								**
13544862-T-A	11389186-T-A								**
13574202-G-T	11418526-G-T								**
13596458-C-A	11440782-C-A								**
13598479-C-A	11442803-C-A								**
13601149-C-A	11445473-C-A								**
13606636-T-C	11450960-T-C								**
13630872-C-A	11475196-C-A								**
	11648452-A-G								**
	11657468-G-T								**
	11670172-GA-G								**
13858346-A-G	11737640-A-G								**
13861036-A-G	11740330-A-G								**
13880116-C-A	11759410-C-A								**
13893389-A-G	11772683-A-G								**
13898787-G-T	11778081-G-T								**
13899078-G-T	11778372-G-T								**
13901940-C-G	11781234-C-G								**
13940321-C-A	11819615-C-A		FT53446						**
14051738-G-T	11931032-G-T								**
14054054-C-A	11933348-C-A								**
14077085-C-G	11956379-C-G								**
14077091-C-A	11956385-C-A								**
14147046-A-G	12026340-A-G								**
14184403-G-A	12063697-G-A								**
14184411-G-A	12063705-G-A								**
14184415-G-A	12063709-G-A								**
14184418-T-A	12063712-T-A								**
14184421-T-C	12063715-T-C								**
14193048-T-A	12072342-T-A								**
14284818-A-G	12164112-A-G								**
14361924-C-A	12241219-C-A								**
14385219-A-G	12264515-A-G								**
14404865-G-C	12284162-G-C								**
14427373-C-A	12306648-C-A								**
14432156-TA-T	12311429-TA-T								**
14471794-C-A	12351063-C-A								**
14490779-C-A	12370048-C-A								**
14526540-C-A	12414741-C-A								**
14539182-C-A	12427383-C-A								**
14539394-A-T	12427595-A-T								**
14584696-C-T	12472896-C-T								**
14598630-A-T	12486830-A-T								**
14671151-C-A	12559217-C-A								**
14681332-G-T	12569398-G-T								**
14727319-ATTTTTT-A	12615387-ATTTTTT-A						23×T		**
14803016-A-C	12691087-A-C								**
14909481-C-A	12797548-C-A								**
14926461-TCAAAAA-T	12814526-TCAAAAA-T								**
15011770-G-A	12899858-G-A								**
15034933-G-T	12923021-G-T								**
15050023-T-C	12938114-T-C								**
15050039-A-G	12938130-A-G								**
15060585-C-T	12948677-C-T								**
15171384-C-A	13059470-C-A								**
15286025-C-A	13174124-C-A								**
15321368-C-T	13209486-C-T								**
15386392-C-A	13274512-C-A								**
15495390-C-A	13383510-C-A								**
15653635-T-A	13541755-T-A								**
15677224-T-C	13565344-T-C								**
15732864-T-C	13620984-T-C								**
15743136-A-G	13631256-A-G								**
15785914-C-T	13674034-C-T								**
15788161-T-A	13676281-T-A								**
15821452-T-C	13709572-T-C								**
15821453-G-A	13709573-G-A								**
15834971-G-T	13723091-G-T								**
15841879-C-A	13729999-C-A								**
15842644-C-T	13730764-C-T								**
15842773-G-T	13730893-G-T								**
15842774-A-G	13730894-A-G								**
15842794-C-G	13730914-C-G								**
15866175-G-A	13754295-G-A								**
15909380-C-A	13797500-C-A								**
16002277-G-A	13890397-G-A								**
16007992-A-C	13896112-A-C								**
16039115-C-A	13927235-C-A								**
16046833-C-A	13934953-C-A								**
16059011-A-C	13947131-A-C								**
16059014-G-T	13947134-G-T								**
16059018-A-T	13947138-A-T								**
16075881-C-A	13964001-C-A								**
16147495-AG-A	14035615-AG-A			P8_Dst					**
16147890-A-AG	14036010-A-AG			P8_Dst					**
16336935-C-A	14225055-C-A								**
16465889-C-T	14354009-C-T								**
16492474-C-A	14380594-C-A								**
16539739-C-A	14427859-C-A								**
16551074-T-C	14439194-T-C								**
16598980-TCAAC-T	14487100-TCAAC-T								**
16688357-G-T	14576477-G-T								**
16704406-C-A	14592526-C-A								**
16738638-T-A	14626758-T-A								**
16743025-C-A	14631145-C-A								**
16747533-A-G	14635653-A-G								**
16938210-T-C	14826330-T-C								**
16938219-T-C	14826339-T-C								**
16987172-G-A	14875292-G-A								**
16987198-T-A	14875318-T-A								**
16993369-A-G	14881489-A-G								**
16997562-A-T	14885682-A-T								**
17042817-C-A	14930937-C-A								**
17158989-TTTTTTG-T	15047109-TTTTTTG-T								**
17164229-T-A	15052349-T-A								**
17177126-C-A	15065246-C-A								**
17369368-T-C	15257488-T-C								**
17375707-G-T	15263827-G-T								**
17470842-T-C	15358962-T-C								**
17492035-C-T	15380155-C-T								**
17702273-C-T	15590393-C-T								**
17702284-A-T	15590404-A-T								**
17753817-T-C	15641937-T-C								**
17903458-C-A	15791578-C-A								**
17995024-G-A	15883144-G-A			P7_Prx					**
18007174-C-A	15895294-C-A			P7_Gap					**
18059776-T-C	15947896-T-C								**
18071643-T-A	15959763-T-A								**
18611783-C-A	16499903-C-A								**
18630815-C-T	16518935-C-T								**
18630825-T-C	16518945-T-C								**
18630829-T-C	16518949-T-C								**
18630831-A-G	16518951-A-G								**
18707992-C-A	16596112-C-A								**
18737634-C-A	16625754-C-A								**
18768432-T-A	16656552-T-A								**
18780465-C-A	16668585-C-A								**
18796627-A-C	16684747-A-C								**
18838826-G-A	16726946-G-A								**
18933771-C-A	16821891-C-A								**
18955801-G-A	16843921-G-A								**
18955852-C-A	16843972-C-A								**
18976520-C-A	16864640-C-A								**
19052403-A-C	16940523-A-C								**
19053232-C-T	16941352-C-T								**
19078935-C-A	16967055-C-A								**
19125689-CGT-C	17013809-CGT-C								**
19155981-C-A	17044101-C-A								**
19299432-C-A	17187552-C-A		FT240353						**
19304673-C-A	17192793-C-A								**
19438567-GGGAA-G	17326687-GGGAA-G								**
19449301-C-A	17337421-C-A								**
19799989-C-A	17688109-C-A			P5_Prx					**
19963832-A-ATATT	17851952-A-ATATT			P5_Prx					**
20376731-C-A	18214845-C-A			P5_Dst					**
20376806-CT-C	18214920-CT-C			P5_Dst					**
20569381-C-A	18407495-C-A			P5_Dst					**
20640930-G-GAA	18479044-G-GAA			P4_Prx			14×A		**
21014998-T-C	18853112-T-C			P4_Dst					**
21015060-A-AGG	18853174-A-AGG			P4_Dst					**
21138629-C-G	18976743-C-G								**
21238268-C-T	19076382-C-T								**
21253889-C-A	19092003-C-A								**
21352928-C-A	19191042-C-A								**
21427201-C-A	19265315-C-A								**
21457198-C-A	19295312-C-A								**
21459604-C-A	19297718-C-A								**
21462609-C-G	19300723-C-G								**
21476473-C-A	19314587-C-A								**
21554334-G-A	19392448-G-A		FT2186						**
21603933-C-A	19442047-C-A								**
21738744-T-C	19576858-T-C								**
21807042-T-A	19645156-T-A								**
21850254-G-T	19688368-G-T								**
21949120-C-T	19787234-C-T								**
21983997-C-A	19822111-C-A								**
21996235-G-T	19834349-G-T								**
22055238-T-C	19893352-T-C								**
22132410-C-A	19970524-C-A								**
22134025-C-A	19972139-C-A								**
22170294-A-T	20008408-A-T								**
22215008-T-A	20053122-T-A								**
22602304-C-A	20440418-C-A								**
22851672-C-A	20689786-C-A								**
22997463-C-T	20835577-C-T								**
23261276-T-G	21099390-T-G								**
23293596-GTGTATATATATA-G	21131710-GTGTATATATATA-G								**
23293619-T-G	21131733-T-G								**
23411310-C-A	21249424-C-A								**
23512380-A-C	21350494-A-C								**
23522584-C-A	21360698-C-A								**
23602163-C-T	21440277-C-T								**
23808796-C-A	21646910-C-A								**
23875213-A-G	21713327-A-G								**
23875282-G-C	21713396-G-C								**
23981912-C-A	21835765-C-A								**
23997265-C-A	21851118-C-A		FGC44757						**
24127453-A-C	21981306-A-C			P3_b1					**
24298896-C-CAA	22152749-C-CAA			P3_t1					**
24475088-C-A	22328941-C-A								**
24910931-T-A	22764784-T-A			g1					**
26060204-A-G	23914057-A-G			P1_Y1					**
26154009-A-T	24007862-A-T			P1_Y1					**
26355498-C-A	24209351-C-A			P1_Y1					**
26391572-T-C	24245425-T-C			P1_Y1					**
26391579-T-A	24245432-T-A			P1_Y1					**
26415627-A-G	24269480-A-G			P1_Y1					**
26415676-CAAAAA-C	24269529-CAAAAA-C			P1_Y1			20×A		**
27521992-G-T	25375845-G-T			P1_Y2					**
27576128-T-C	25429981-T-C			P1_Y2					**
27595818-C-T	25449671-C-T			P1_Y2					**
27636256-G-T	25490109-G-T			P1_Y2					**
27971701-C-A	25825554-C-A			P1_Y2					**
28147159-CA-C	26001012-CA-C			P1_b4					**
28369966-T-C	26223819-T-C			P1_gr2					**
28438144-T-A	26291997-T-A			P1_gr2					**
28484326-C-A	26338179-C-A								**
28605954-C-A	26459807-C-A								**
28609570-GA-G	26463423-GA-G								**
28609582-G-T	26463435-G-T								**
28609587-G-T	26463440-G-T								**
28609589-C-T	26463442-C-T								**
28640447-C-A	26494300-C-A								**
28716402-C-A	26570255-C-A								**
28724194-TG-T	26578047-TG-T								**
28725983-C-A	26579836-C-A								**
28745111-C-A	26598964-C-A								**
	56823322-A-G								**
	56823337-C-A								**
	56863043-T-A								**
13564588-C-G	11408912-C-G									**
18370353-T-G	16258473-T-G			P6_Prx						**
26010720-C-A	23864573-C-A			P1_Y1						**
27982169-CATTATT-C	25836022-CATTATT-C			P1_Y2			10×ATT			**
25198319-C-CT	23052172-C-CT			g1			14×T	***
22489633-G-T	20327747-G-T			DYZ19				***
19668775-C-A	17556895-C-A			P5_Prx				***
13433618-TT-A	11277942-TT-A							***
22507686-T-A	20345800-T-A			DYZ19				***
25472735-C-A	23326588-C-A			P2_r2			23×A	***
27791947-T-G	25645800-T-G			P1_Y2				***
10025908-A-G	10188299-A-G							***
10025922-G-A	10188313-G-A							***
13447090-ACCATTCTATTACTTT-A	11291414-ACCATTCTATTACTTT-A							***
13450176-CCATTG-C,CCATTC	11294500-CCATTG-C,CCATTC							***
13454804-TTCTAC-T	11299128-TTCTAC-T							***
13459103-T-TTCCCC	11303427-T-TTCCCC							***
13700464-T-G	11544788-T-G							***
13714333-ATTGAT-A	11558657-ATTGAT-A							***
13714341-A-G	11558665-A-G							***
13737177-TCGAAC-T	11581501-TCGAAC-T							***
13830225-GA-G	11709519-GA-G							***
13830229-G-T	11709523-G-T							***
13845541-A-AAATGGAATGG,G	11724835-A-AAATGGAATGG,G						8×AATGG	***
13860119-T-C	11739413-T-C							***
13860121-A-G	11739415-A-G							***
13860122-A-T	11739416-A-T							***
13860129-G-A	11739423-G-A							***
17802196-AG-A	15690316-AG-A							***
18982584-AAAG-A,AAAA	16870704-AAAG-A,AAAA							***
22244790-T-G	20082904-T-G		FGC71298	DYZ19				***
22244796-T-A	20082910-T-A			DYZ19				***
22244809-A-T	20082923-A-T		BY38900	DYZ19				***
22244822-T-C	20082936-T-C			DYZ19				***
22244859-G-C	20082973-G-C			DYZ19				***
22244863-T-A	20082977-T-A			DYZ19				***
22284220-C-G	20122334-C-G			DYZ19				***
22296760-G-A	20134874-G-A			DYZ19				***
22313402-C-G	20151516-C-G			DYZ19				***
22451768-C-T	20289882-C-T			DYZ19				***
24095697-T-A	21949550-T-A			P3_b1				***
24100709-T-C	21954562-T-C			P3_b1				***
24138899-A-G	21992752-A-G			P3_b1				***
24834707-T-C	22688560-T-C			P3_b2				***
24914282-A-G	22768135-A-G			g1				***
24953782-T-A	22807635-T-A			g1				***
25250508-T-C	23104361-T-C			P2_r1				***
25333853-AC-A	23187706-AC-A			P2_r1				***
26991333-T-TAAAA	24845186-T-TAAAA			P1_r4			33×A	***
27791941-T-G	25645794-T-G			P1_Y2				***
58973226-G-T	56827079-G-T							***
13455784-AAGTCCATTCT-A,C	11300108-AAGTCCATTCT-A,C							***
13856276-A-AGGAAT	11735570-A-AGGAAT							***
13455624-CACTCGGGTTG-C	11299948-CACTCGGGTTG-C							***
13864550-T-A,G	11743844-T-A,G							***
13686912-C-A,CGAATG	11531236-C-A,CGAATG						10×GAATG	***
13842631-C-G,T	11721925-C-G,T							***
13462355-C-T	11306679-C-T								***
2718901-TTG-T	2850860-TTG-T								***
2833178-CTTTT-C,CTTT	2965137-CTTTT-C,CTTT						19×T		***
5449442-G-T	5581401-G-T		FT419968						***
5644733-T-C	5776692-T-C								***
5864496-C-A	5996455-C-A								***
5864663-C-A	5996622-C-A								***
7704481-C-A	7836440-C-A								***
9014283-C-A	9176674-C-A								***
9385062-C-A	9547453-C-A								***
	10791092-G-T								***
	10838980-C-A								***
	10842499-C-A								***
	10892631-T-C								***
	10940601-A-T								***
	10940626-G-A								***
	10946948-CTCCAT-C								***
	10949492-C-A								***
13435136-C-A	11279460-C-A								***
	11672626-G-A								***
14324921-GA-G	12204215-GA-G								***
16702028-T-C	14590148-T-C								***
17885853-G-T	15773973-G-T								***
21156829-C-T	18994943-C-T								***
23625448-A-G	21463562-A-G								***
23759112-CT-A	21597226-CT-A								***
23838957-G-A	21677071-G-A								***
	21754394-G-T								***
	56828189-C-T								***
	56832841-TGCCAG-T,TGCCAC								***
3201648-G-GA	3333607-G-GA						10×A			***
9956378-A-AAG	10118769-A-AAG						8×AAG			***
7383851-CAAAAAAA-C	7515810-CAAAAAAA-C						24×A			***
6929132-CTTTTT-C	7061091-CTTTTT-C						26×T			***
16475324-CGGG-C,CGGGG	14363444-CGGG-C,CGGGG						11×G			***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

McNeiladge

Tree Position

Unique Mutations