Parish
FTDNA: 118119, BigY3: 118119, BigY2: 118119Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 118119 | BigY3 118119 | BigY2 118119 |
---|---|---|---|---|---|---|---|---|---|---|
28453895-C-CA | 26307748-C-CA | P1_gr2 | 14×A | A+ | ||||||
20774922-G-A | 18613036-G-A | P4_Prx | 22×A | A* | ||||||
14436052-G-A | 12315325-G-A | A6903 | A6903 Z39578 | Y | A* | |||||
24332570-C-A | 22186423-C-A | P3_t1 | *** | A* | A* | |||||
9100127-G-T | 9262518-G-T | Y | A* | |||||||
18011029-G-T | 15899149-G-T | P7_Dst | Y | A* | ||||||
28808669-G-T | 26662522-G-T | FT462511 | A* | |||||||
28808670-G-T | 26662523-G-T | A* | ||||||||
28808648-T-A | 26662501-T-A | A* | ||||||||
28808673-C-T | 26662526-C-T | FT462512 | A* | |||||||
20230135-G-A | 18068249-G-A | P5_Dst | A* | |||||||
18011032-A-T | 15899152-A-T | P7_Dst | Y | A* | ||||||
13450057-C-T | 11294381-C-T | A* | ||||||||
56831330-C-T | A* | |||||||||
14223942-A-G | 12103236-A-G | BY94059 | Y | Y | + | + | + | |||
17196612-A-G | 15084732-A-G | Y | Y | + | ||||||
18588133-A-G | 16476253-A-G | BY122388 | Y | Y | + | + | + | |||
14104074-T-A | 11983368-T-A | FT179800 | Y | Y | + | ** | ||||
5555844-T-C | 5687803-T-C | FT206559 | + | |||||||
10881000-C-G | FT435321 | + | ||||||||
13805186-T-C | 11684480-T-C | DYZ17 | ** | |||||||
13856432-C-G | 11735726-C-G | DYZ17 | ** | |||||||
13856667-G-C | 11735961-G-C | DYZ17 | ** | |||||||
13856438-T-G | 11735732-T-G | DYZ17 | ** | |||||||
13143909-G-C | 10633395-G-C | ** | ||||||||
22369831-N-A | 20207945-N-A | DYZ19 | ** | |||||||
4683643-G-A | 4815602-G-A | ** | ||||||||
22369832-N-T | 20207946-N-T | DYZ19 | ** | |||||||
22369833-N-A | 20207947-N-A | DYZ19 | ** | |||||||
22369834-N-A | 20207948-N-A | DYZ19 | ** | |||||||
22369835-N-G | 20207949-N-G | DYZ19 | ** | |||||||
58972141-T-A | 56825994-T-A | ** | ||||||||
18195204-C-A | 16083324-C-A | ** | ||||||||
9942316-C-A | 10104707-C-A | PF1966 | ** | |||||||
13811057-TGGTATTGAAA-T | 11690351-TGGTATTGAAA-T | DYZ17 | ** | |||||||
58972156-T-C | 56826009-T-C | ** | ||||||||
6205056-A-AAT | 6337015-A-AAT | IR3_Dst | ** | |||||||
10955296-T-A | ** | |||||||||
10755366-C-T | ** | |||||||||
21455858-C-A | 19293972-C-A | ** | ||||||||
10841076-C-G | ** | |||||||||
23789394-C-A | 21627508-C-A | ** | ||||||||
10955281-C-G | ** | |||||||||
8911593-G-T | 9043552-G-T | ** | ||||||||
13462356-T-A | 11306680-T-A | ** | ||||||||
10744289-T-C | ** | |||||||||
10818675-G-C | ** | |||||||||
56724771-A-T | ** | |||||||||
11033880-C-A | ** | |||||||||
10686545-G-C | ** | |||||||||
6177404-C-T | 6309363-C-T | IR3_Dst | ** | |||||||
16786198-A-C | 14674318-A-C | ** | ||||||||
11013228-C-T | FT97412 | ** | ||||||||
11013244-A-T | ** | |||||||||
10770646-T-C | ** | |||||||||
10770670-C-T | ** | |||||||||
10770674-A-T | ** | |||||||||
10690520-C-A | ** | |||||||||
7897476-G-T | 8029435-G-T | ** | ||||||||
5650539-C-A | 5782498-C-A | ** | ||||||||
10693948-C-A | ** | |||||||||
10654377-C-G | ** | |||||||||
10654393-A-G | ** | |||||||||
10654410-T-C | ** | |||||||||
10654459-T-G | ** | |||||||||
11033869-T-A | ** | |||||||||
10791902-A-C | ** | |||||||||
10694027-CTCCAT-C | ** | |||||||||
18869058-C-A | 16757178-C-A | ** | ||||||||
19520839-C-T | 17408959-C-T | ** | ||||||||
19583537-C-A | 17471657-C-A | P5_Prx | ** | |||||||
10673456-C-A | ** | |||||||||
13466470-CT-C | 11310794-CT-C | ** | ||||||||
10841039-T-A | ** | |||||||||
10841044-T-C | ** | |||||||||
10841054-T-A | ** | |||||||||
10841061-C-G | ** | |||||||||
10841079-C-T | ** | |||||||||
10818683-A-T | ** | |||||||||
10795851-C-T | ** | |||||||||
5141486-G-T | 5273445-G-T | ** | ||||||||
7414277-CAAAAA-C | 7546236-CAAAAA-C | 27×A | ** | |||||||
13512595-C-A | 11356919-C-A | ** | ||||||||
13941121-C-A | 11820415-C-A | ** | ||||||||
10785861-C-A | ** | |||||||||
15262426-G-A | 13150510-G-A | FT329543 | ** | |||||||
10003379-G-T | 10165770-G-T | ** | ||||||||
10686528-C-T | ** | |||||||||
11015992-C-A | FT45506 | ** | ||||||||
21407120-G-T | 19245234-G-T | ** | ||||||||
22530042-C-T | 20368156-C-T | ** | ||||||||
9402566-C-T | 9564957-C-T | ** | ||||||||
19122108-G-T | 17010228-G-T | ** | ||||||||
24513176-C-A | 22367029-C-A | ** | ||||||||
10985061-C-T | ** | |||||||||
21755481-C-A | ** | |||||||||
14613459-C-CTT | 12501657-C-CTT | 26×T | ** | |||||||
27998541-G-T | 25852394-G-T | P1_Y2 | ** | |||||||
18522231-A-AG | 16410351-A-AG | P6_Dst | ** | |||||||
2788705-C-A | 2920664-C-A | ** | ||||||||
3277552-CCTGGTTT-C | 3409511-CCTGGTTT-C | ** | ||||||||
3320301-C-A | 3452260-C-A | ** | ||||||||
3448367-G-T | 3580326-G-T | ** | ||||||||
3475828-A-T | 3607787-A-T | ** | ||||||||
4056551-C-A | 4188510-C-A | FT144962 | ** | |||||||
4194754-G-T | 4326713-G-T | ** | ||||||||
4438818-C-A | 4570777-C-A | ** | ||||||||
4445367-C-A | 4577326-C-A | ** | ||||||||
4963602-G-T | 5095561-G-T | ** | ||||||||
5036851-G-T | 5168810-G-T | ** | ||||||||
5195597-GT-G | 5327556-GT-G | ** | ||||||||
5236566-C-A | 5368525-C-A | ** | ||||||||
5236590-T-C | 5368549-T-C | ** | ||||||||
5405050-G-T | 5537009-G-T | ** | ||||||||
6101395-G-T | 6233354-G-T | ** | ||||||||
6159011-C-A | 6290970-C-A | IR3_Dst | ** | |||||||
6654947-G-T | 6786906-G-T | ** | ||||||||
6654968-G-T | 6786927-G-T | ** | ||||||||
7175765-A-G | 7307724-A-G | ** | ||||||||
9118611-T-C | ** | |||||||||
10686537-A-ATTGCT | ** | |||||||||
10686552-A-T | ** | |||||||||
10686604-T-G | ** | |||||||||
10689798-T-TC | ** | |||||||||
10756866-A-G | ** | |||||||||
10789022-T-C | ** | |||||||||
10793790-C-A | ** | |||||||||
10795862-A-ATTCTG | ** | |||||||||
10795866-C-CAATTA | ** | |||||||||
10795879-T-A | ** | |||||||||
10802109-T-C | ** | |||||||||
10807292-T-C | ** | |||||||||
10808047-A-T | ** | |||||||||
10893575-T-C | ** | |||||||||
10938709-C-T | ** | |||||||||
13462329-C-T | 11306653-C-T | ** | ||||||||
13597361-G-T | 11441685-G-T | ** | ||||||||
11654079-A-G | DYZ17 | ** | ||||||||
11658449-A-G | DYZ17 | ** | ||||||||
13958740-A-T | 11838034-A-T | ** | ||||||||
14743777-A-T | 12631846-A-T | ** | ||||||||
15012704-C-T | 12900792-C-T | ** | ||||||||
15287073-C-A | 13175172-C-A | ** | ||||||||
15630368-C-A | 13518488-C-A | ** | ||||||||
16031233-G-T | 13919353-G-T | ** | ||||||||
16931219-A-G | 14819339-A-G | ** | ||||||||
19097318-G-T | 16985438-G-T | ** | ||||||||
20655119-A-G | 18493233-A-G | P4_Prx | ** | |||||||
24050409-A-T | 21904262-A-T | P3_b1 | ** | |||||||
28560209-T-C | 26414062-T-C | ** | ||||||||
28645959-G-T | 26499812-G-T | ** | ||||||||
56832846-G-GTCCATTACAA | ** | |||||||||
56835234-C-T | ** | |||||||||
56840708-G-T | ** | |||||||||
56858042-A-T | ** | |||||||||
56878276-A-C | ** | |||||||||
56878280-G-A | ** | |||||||||
56878290-C-A | ** | |||||||||
27525243-CTTTTT-C | 25379096-CTTTTT-C | P1_Y2 | 27×T | ** | ||||||
16480263-TTTA-T | 14368383-TTTA-T | ** | ||||||||
13465841-C-T | 11310165-C-T | ** | ||||||||
4020773-A-T | 4152732-A-T | ** | ||||||||
4223542-G-A | 4355501-G-A | ** | ||||||||
7257716-T-C | 7389675-T-C | ** | ||||||||
13465840-G-A | 11310164-G-A | ** | ||||||||
12371627-A-T | ** | |||||||||
14505584-T-C | 12393789-T-C | ** | ||||||||
15385742-A-G | 13273862-A-G | ** | ||||||||
17723891-C-T | 15612011-C-T | ** | ||||||||
19878162-A-G | 17766282-A-G | P5_Prx | ** | |||||||
21274851-G-A | 19112965-G-A | ** | ||||||||
21367730-T-C | 19205844-T-C | ** | ||||||||
22813993-T-C | 20652107-T-C | ** | ||||||||
13196143-C-T | 11040467-C-T | *** | ||||||||
13196148-G-C | 11040472-G-C | *** | ||||||||
13196160-C-T | 11040484-C-T | *** | ||||||||
13196170-C-T | 11040494-C-T | *** | ||||||||
13452788-A-T | 11297112-A-T | *** | ||||||||
13865752-A-G | 11745046-A-G | DYZ17 | *** | |||||||
28785577-C-G | 26639430-C-G | *** | ||||||||
13455114-T-C | 11299438-T-C | BY85416 | *** | |||||||
6130300-CAA-C | 6262259-CAA-C | *** | ||||||||
13452690-G-C | 11297014-G-C | *** | ||||||||
13846329-C-G | 11725623-C-G | DYZ17 | *** | |||||||
13851306-G-A | 11730600-G-A | DYZ17 | *** | |||||||
13869466-A-C | 11748760-A-C | DYZ17 | *** | |||||||
13869612-T-A | 11748906-T-A | DYZ17 | *** | |||||||
26359590-CA-C | 24213443-CA-C | P1_Y1 | 22×A | *** | ||||||
13869439-G-A | 11748733-G-A | DYZ17 | *** | |||||||
13143917-T-C | 10633403-T-C | *** | ||||||||
13647978-C-A | 11492302-C-A | DYZ17 | *** | |||||||
13803161-T-A | 11682455-T-A | DYZ17 | *** | |||||||
13808079-A-T | 11687373-A-T | DYZ17 | *** | |||||||
13808088-G-A | 11687382-G-A | FGC24735 | DYZ17 | *** | ||||||
13808096-C-G | 11687390-C-G | DYZ17 | *** | |||||||
13815065-T-A | 11694359-T-A | DYZ17 | *** | |||||||
13817545-A-G | 11696839-A-G | DYZ17 | *** | |||||||
13820898-A-G | 11700192-A-G | DYZ17 | *** | |||||||
13820904-A-G | 11700198-A-G | DYZ17 | *** | |||||||
13829428-A-T | 11708722-A-T | DYZ17 | *** | |||||||
13866703-A-T | 11745997-A-T | DYZ17 | *** | |||||||
13866734-A-G | 11746028-A-G | DYZ17 | *** | |||||||
13866777-G-A | 11746071-G-A | DYZ17 | *** | |||||||
13866789-A-G | 11746083-A-G | DYZ17 | *** | |||||||
13867885-A-T | 11747179-A-T | DYZ17 | *** | |||||||
28800134-G-A | 26653987-G-A | *** | ||||||||
58975017-T-A | 56828870-T-A | *** | ||||||||
13664775-A-T | 11509099-A-T | DYZ17 | *** | |||||||
23720433-TAA-T | 21558547-TAA-T | 15×A | *** | |||||||
13813436-C-T | 11692730-C-T | DYZ17 | *** | |||||||
13483228-C-A,G | 11327552-C-A,G | *** | ||||||||
13842138-T-G | 11721432-T-G | DYZ17 | *** | |||||||
13851397-G-A | 11730691-G-A | DYZ17 | *** | |||||||
13866688-T-A | 11745982-T-A | DYZ17 | *** | |||||||
13866717-A-G | 11746011-A-G | DYZ17 | *** | |||||||
13866758-T-A | 11746052-T-A | DYZ17 | *** | |||||||
13866759-G-T | 11746053-G-T | DYZ17 | *** | |||||||
13866764-G-A | 11746058-G-A | DYZ17 | *** | |||||||
13866770-A-T | 11746064-A-T | DYZ17 | *** | |||||||
13866781-A-G | 11746075-A-G | DYZ17 | *** | |||||||
13140286-T-C | 10629772-T-C | *** | ||||||||
13488827-G-A | 11333151-G-A | *** | ||||||||
13677949-A-G | 11522273-A-G | DYZ17 | *** | |||||||
13809851-C-A | 11689145-C-A | DYZ17 | *** | |||||||
13817530-G-A | 11696824-G-A | FT350271 | DYZ17 | *** | ||||||
13817532-C-G | 11696826-C-G | DYZ17 | *** | |||||||
13818653-T-G | 11697947-T-G | DYZ17 | *** | |||||||
13818843-A-G | 11698137-A-G | DYZ17 | *** | |||||||
13857985-T-C,G | 11737279-T-C,G | DYZ17 | *** | |||||||
28805236-ATGGAATGGAATGGAAT-A | 26659089-ATGGAATGGAATGGAAT-A | *** | ||||||||
13459632-G-T | 11303956-G-T | *** | ||||||||
13829429-A-G | 11708723-A-G | DYZ17 | *** | |||||||
13869284-G-A | 11748578-G-A | DYZ17 | *** | |||||||
28793403-C-G | 26647256-C-G | *** | ||||||||
13647901-C-G | 11492225-C-G | FT396962 | DYZ17 | *** | ||||||
13452700-G-C | 11297024-G-C | *** | ||||||||
13850497-G-A | 11729791-G-A | DYZ17 | 4×ATGGA | *** | ||||||
13865818-T-A | 11745112-T-A | DYZ17 | *** | |||||||
13868415-G-C | 11747709-G-C | DYZ17 | *** | |||||||
13869226-A-G | 11748520-A-G | DYZ17 | *** | |||||||
13818672-G-C | 11697966-G-C | DYZ17 | *** | |||||||
13866794-C-T | 11746088-C-T | DYZ17 | *** | |||||||
13804721-G-A | 11684015-G-A | DYZ17 | *** | |||||||
13848277-T-A | 11727571-T-A | DYZ17 | *** | |||||||
13454767-C-T | 11299091-C-T | *** | ||||||||
13680921-G-C | 11525245-G-C | DYZ17 | *** | |||||||
13693898-A-G | 11538222-A-G | DYZ17 | *** | |||||||
13693899-T-A | 11538223-T-A | DYZ17 | *** | |||||||
13693902-T-A | 11538226-T-A | DYZ17 | *** | |||||||
13808111-A-G | 11687405-A-G | DYZ17 | *** | |||||||
13808125-C-G | 11687419-C-G | DYZ17 | *** | |||||||
22293443-G-A | 20131557-G-A | DYZ19 | *** | |||||||
13686843-T-G | 11531167-T-G | DYZ17 | *** | |||||||
13812790-A-T | 11692084-A-T | DYZ17 | *** | |||||||
22293444-T-C | 20131558-T-C | DYZ19 | *** | |||||||
13664773-G-C | 11509097-G-C | DYZ17 | *** | |||||||
13815002-C-G | 11694296-C-G | DYZ17 | *** | |||||||
13459198-T-C | 11303522-T-C | *** | ||||||||
8333599-C-T | 8465558-C-T | *** | ||||||||
13456370-C-A | 11300694-C-A | *** | ||||||||
13808095-T-G | 11687389-T-G | DYZ17 | *** | |||||||
58977805-G-C | 56831658-G-C | *** | ||||||||
13803298-G-A | 11682592-G-A | DYZ17 | *** | |||||||
13823310-A-G | 11702604-A-G | DYZ17 | *** | |||||||
13847407-G-T | 11726701-G-T | DYZ17 | *** | |||||||
25462345-GAC-G | 23316198-GAC-G | P2_r2 | 22×AC | *** | ||||||
9307402-G-C | 9469793-G-C | *** | ||||||||
13455703-T-C | 11300027-T-C | *** | ||||||||
13866952-C-A | 11746246-C-A | DYZ17 | *** | |||||||
13459247-G-A,GTTCCA | 11303571-G-A,GTTCCA | 9×TTCCA | *** | |||||||
10026516-G-A | 10188907-G-A | BY83144 | *** | |||||||
13815585-G-A | 11694879-G-A | DYZ17 | *** | |||||||
25256636-G-GT | 23110489-G-GT | P2_r1 | 15×T | *** | ||||||
13864435-T-G | 11743729-T-G | DYZ17 | *** | |||||||
13865837-A-G | 11745131-A-G | FTB79311 | DYZ17 | *** | ||||||
58819369-A-G | 56771502-T-C | *** | ||||||||
13141089-ATTCCGTTTTG-A,ATTCCGT | 10630575-ATTCCGTTTTG-A,ATTCCGT | *** | ||||||||
13859815-A-G | 11739109-A-G | DYZ17 | *** | |||||||
13803163-G-A | 11682457-G-A | DYZ17 | *** | |||||||
9987981-G-A | 10150372-G-A | *** | ||||||||
28799865-G-A | 26653718-G-A | *** | ||||||||
13865767-A-G | 11745061-A-G | DYZ17 | *** | |||||||
58974000-C-G | 56827853-C-G | *** | ||||||||
13454921-T-C | 11299245-T-C | *** | ||||||||
13856458-G-C | 11735752-G-C | DYZ17 | *** | |||||||
13865769-G-C | 11745063-G-C | DYZ17 | *** | |||||||
13452841-C-T | 11297165-C-T | *** | ||||||||
13815081-A-T | 11694375-A-T | DYZ17 | *** | |||||||
13647930-G-T | 11492254-G-T | DYZ17 | *** | |||||||
13647945-C-T | 11492269-C-T | BY210570 | BY210570 | DYZ17 | *** | |||||
24600442-CTCTT-C,CT | 22454295-CTCTT-C,CT | P3_t2 | 18×TCTT | *** | ||||||
13815023-G-A | 11694317-G-A | DYZ17 | *** | |||||||
6673834-T-TA | 6805793-T-TA | 10×A | *** | |||||||
13647936-G-C | 11492260-G-C | DYZ17 | *** | |||||||
13815000-G-A,C | 11694294-G-A,C | DYZ17 | *** | |||||||
13847353-A-G | 11726647-A-G | DYZ17 | *** | |||||||
13410731-A-G | 11255055-A-G | *** | ||||||||
13842167-C-G | 11721461-C-G | DYZ17 | *** | |||||||
13865762-A-G | 11745056-A-G | DYZ17 | *** | |||||||
9222596-C-G | 9384987-C-G | *** | ||||||||
58973871-T-C | 56827724-T-C | *** | ||||||||
13842083-G-A | 11721377-G-A | Y33632 | DYZ17 | *** | ||||||
13862799-T-A | 11742093-T-A | DYZ17 | *** | |||||||
22345686-A-T | 20183800-A-T | BY217596 | DYZ19 | *** | ||||||
13461150-A-T | 11305474-A-T | *** | ||||||||
13856466-T-C | 11735760-T-C | DYZ17 | *** | |||||||
22451050-T-C | 20289164-T-C | DYZ19 | *** | |||||||
9843166-G-A | 10005557-G-A | *** | ||||||||
22345678-C-T | 20183792-C-T | DYZ19 | *** | |||||||
22471459-G-A | 20309573-G-A | GG360 Z17870 | DYZ19 | *** | ||||||
59007577-C-T | 56861430-C-T | *** | ||||||||
21472228-C-A | 19310342-C-A | *** | ||||||||
13868001-G-GAATGA | 11747295-G-GAATGA | DYZ17 | *** | |||||||
13842092-G-A | 11721386-G-A | DYZ17 | *** | |||||||
13866763-T-A | 11746057-T-A | DYZ17 | *** | |||||||
13857571-G-A | 11736865-G-A | DYZ17 | *** | |||||||
13866741-A-C | 11746035-A-C | DYZ17 | *** | |||||||
13866742-A-T | 11746036-A-T | DYZ17 | *** | |||||||
13866800-C-G,T | 11746094-C-G,T | DYZ17 | *** | |||||||
13652105-ACAGAACGGAATGGAG-A | 11496429-ACAGAACGGAATGGAG-A | DYZ17 | *** | |||||||
13815042-G-A | 11694336-G-A | DYZ17 | *** | |||||||
13839837-G-A,T | 11719131-G-A,T | DYZ17 | *** | |||||||
13865820-G-C | 11745114-G-C | DYZ17 | *** | |||||||
13865827-A-G | 11745121-A-G | DYZ17 | *** | |||||||
26170448-AAGC-A | 24024301-AAGC-A | P1_Y1 | *** | |||||||
58883882-CCATTG-C | 56706979-GAATGC-G | *** | ||||||||
10018623-TACTG-T | 10181014-TACTG-T | *** | ||||||||
58980693-A-C,T | 56834546-A-C,T | *** | ||||||||
13851569-ATGGAC-A,ATGGAA | 11730863-ATGGAC-A,ATGGAA | DYZ17 | *** | |||||||
13857971-T-C,G | 11737265-T-C,G | DYZ17 | *** | |||||||
22293411-TC-T,TG | 20131525-TC-T,TG | DYZ19 | *** | |||||||
22446357-T-A | 20284471-T-A | DYZ19 | *** | |||||||
21558700-A-T | 19396814-A-T | FT307854 | 10×T | *** | ||||||
18923342-GTTTTT-G | 16811462-GTTTTT-G | 18×T | *** | |||||||
16905870-C-A | 14793990-C-A | 25×A | *** | |||||||
6759248-C-A | 6891207-C-A | *** | ||||||||
10069893-A-G | 10232284-A-G | *** | ||||||||
21905326-T-C | 19743440-T-C | *** | ||||||||
2738763-CTTTT-C | 2870722-CTTTT-C | 17×T | *** | |||||||
9843184-C-A | 10005575-C-A | 15×A | *** | |||||||
19012408-C-A | 16900528-C-A | *** | ||||||||
14977296-C-CTT | 12865371-C-CTT | 15×T | *** | |||||||
13453173-C-G | 11297497-C-G | *** | ||||||||
19048922-T-C | 16937042-T-C | *** | ||||||||
13823208-GA-G | 11702502-GA-G | DYZ17 | *** | |||||||
22011644-C-A | 19849758-C-A | *** | ||||||||
4527513-C-A | 4659472-C-A | *** | ||||||||
10889266-GCCATTCCATTCCATT-G | *** | |||||||||
21435190-CTTT-C | 19273304-CTTT-C | 15×T | *** | |||||||
14286828-C-T | 12166122-C-T | *** | ||||||||
3592844-C-A | 3724803-C-A | *** | ||||||||
10907704-T-A | *** | |||||||||
10746999-G-GTTGTGTTTGGGTTAA | *** | |||||||||
17018826-C-A | 14906946-C-A | *** | ||||||||
21946456-G-A | 19784570-G-A | *** | ||||||||
21979602-ATT-A | 19817716-ATT-A | 14×T | *** | |||||||
17713876-C-A | 15601996-C-A | *** | ||||||||
22722384-G-T | 20560498-G-T | *** | ||||||||
7076612-CAAAAAAA-C | 7208571-CAAAAAAA-C | 29×A | *** | |||||||
10986701-C-G | *** | |||||||||
8069959-ATTT-A,AT | 8201918-ATTT-A,AT | 19×T | *** | |||||||
14485194-G-T | 12364463-G-T | *** | ||||||||
56830967-C-A | *** | |||||||||
17637638-AACACAC-A,AACAC | 15525758-AACACAC-A,AACAC | 21×AC | *** | |||||||
56846419-G-T | *** | |||||||||
8230859-C-A | 8362818-C-A | *** | ||||||||
21262464-C-A | 19100578-C-A | *** | ||||||||
21211531-C-A | 19049645-C-A | *** | ||||||||
18687693-T-A | 16575813-T-A | *** | ||||||||
14392763-C-T | 12272059-C-T | *** | ||||||||
21240778-C-A | 19078892-C-A | *** | ||||||||
22936324-C-T | 20774438-C-T | *** | ||||||||
11646361-C-A | DYZ17 | *** | ||||||||
8385857-GA-G | 8517816-GA-G | 10×A | *** | |||||||
4390006-GA-G | 4521965-GA-G | 10×A | *** | |||||||
23007391-G-T | 20845505-G-T | *** | ||||||||
22345674-G-A | 20183788-G-A | DYZ19 | *** | |||||||
13811093-G-C | 11690387-G-C | DYZ17 | *** | |||||||
13455774-A-T | 11300098-A-T | *** | ||||||||
22936321-A-T | 20774435-A-T | *** | ||||||||
22797955-G-T | 20636069-G-T | *** | ||||||||
13474010-T-C | 11318334-T-C | *** | ||||||||
13474018-A-G | 11318342-A-G | *** | ||||||||
13474026-G-C | 11318350-G-C | *** | ||||||||
21127293-C-A | 18965407-C-A | *** | ||||||||
4113148-T-A | 4245107-T-A | *** | ||||||||
9398185-C-A | 9560576-C-A | *** | ||||||||
7040036-G-T | 7171995-G-T | *** | ||||||||
3407716-C-A | 3539675-C-A | *** | ||||||||
13624267-C-T | 11468591-C-T | *** | ||||||||
13236316-C-A | 11080640-C-A | *** | ||||||||
18850580-C-A | 16738700-C-A | *** | ||||||||
18867339-CTTTTTTT-C | 16755459-CTTTTTTT-C | 24×T | *** | |||||||
22345684-T-C | 20183798-T-C | DYZ19 | *** | |||||||
22874527-C-A | 20712641-C-A | *** | ||||||||
24470837-T-G | 22324690-T-G | *** | ||||||||
13485379-C-A | 11329703-C-A | *** | ||||||||
13194785-C-A | 11039109-C-A | *** | ||||||||
18060391-CAT-C | 15948511-CAT-C | *** | ||||||||
56836562-C-A | *** | |||||||||
3378851-CAA-C | 3510810-CAA-C | 13×A | *** | |||||||
8350845-C-A | 8482804-C-A | *** | ||||||||
24220560-C-A | 22074413-C-A | P3_b1 | *** | |||||||
15200198-C-A | 13088284-C-A | *** | ||||||||
22936317-A-G | 20774431-A-G | *** | ||||||||
13455784-AAGTCC-A | 11300108-AAGTCC-A | *** | ||||||||
21846452-CTT-C,CT | 19684566-CTT-C,CT | 26×T | *** | |||||||
24386960-C-CTA | 22240813-C-CTA | *** | ||||||||
2847332-C-A | 2979291-C-A | *** | ||||||||
2986117-G-T | 3118076-G-T | *** | ||||||||
3334642-A-C | 3466601-A-C | *** | ||||||||
5558580-T-A | 5690539-T-A | *** | ||||||||
8130394-G-T | 8262353-G-T | *** | ||||||||
8631427-A-C | 8763386-A-C | *** | ||||||||
9461821-C-A | 9624212-C-A | *** | ||||||||
10020359-T-C | 10182750-T-C | *** | ||||||||
10023097-C-A | 10185488-C-A | *** | ||||||||
10780649-C-G | *** | |||||||||
13213843-A-G | 11058167-A-G | *** | ||||||||
13840793-A-G | 11720087-A-G | DYZ17 | *** | |||||||
14985005-C-A | 12873073-C-A | *** | ||||||||
14986622-CT-C | 12874690-CT-C | *** | ||||||||
15279050-T-C | 13167149-T-C | *** | ||||||||
16047899-T-C | 13936019-T-C | *** | ||||||||
17142105-A-G | 15030225-A-G | *** | ||||||||
17937252-CA-C | 15825372-CA-C | 9×A | *** | |||||||
18687700-C-T | 16575820-C-T | *** | ||||||||
19202727-C-A | 17090847-C-A | *** | ||||||||
19318320-G-A | 17206440-G-A | *** | ||||||||
21234679-G-A | 19072793-G-A | *** | ||||||||
21323781-C-A | 19161895-C-A | *** | ||||||||
21969586-T-A | 19807700-T-A | *** | ||||||||
22896175-T-C | 20734289-T-C | *** | ||||||||
22929693-GAA-G,GAAA | 20767807-GAA-G,GAAA | 14×A | *** | |||||||
23742222-T-C | 21580336-T-C | *** | ||||||||
23792019-C-T | 21630133-C-T | *** | ||||||||
5400897-G-T | 5532856-G-T | *** | ||||||||
6597876-C-CT | 6729835-C-CT | 10×T | *** | |||||||
17128535-CTTTT-C,CTTT | 15016655-CTTTT-C,CTTT | 25×T | *** | |||||||
13696733-C-T | 11541057-C-T | DYZ17 | *** | |||||||
4537586-CTTTT-C,CTTTTT | 4669545-CTTTT-C,CTTTTT | 21×T | *** | |||||||
7375270-TC-T | 7507229-TC-T | *** | ||||||||
9820685-A-G | 9983076-A-G | *** | ||||||||
13374066-G-A | 11218390-G-A | *** | ||||||||
14247633-TA-T | 12126927-TA-T | *** | ||||||||
15186327-C-A | 13074413-C-A | *** | ||||||||
16040802-CTT-C,CTTT | 13928922-CTT-C,CTTT | 16×T | *** | |||||||
19829454-A-ATT | 17717574-A-ATT | P5_Prx | 12×T | *** | ||||||
22011573-A-G | 19849687-A-G | *** | ||||||||
22345679-A-G | 20183793-A-G | DYZ19 | *** | |||||||
28545040-A-G | 26398893-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.