Shadbolt
FTDNA: 317870, BigY2: 317870MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 317870 | BigY2 317870 |
---|---|---|---|---|---|---|---|---|---|
14389586-G-GA | 12268882-G-GA | 10×A | A* | ||||||
6317195-G-A | 6449154-G-A | IR3_Dst | *** | A* | |||||
13697666-T-C | 11541990-T-C | *** | A* | ||||||
20631754-G-A | 18469868-G-A | P4_Prx | *** | A* | |||||
25856972-T-G | 23710825-T-G | P1_Y1 | *** | A* | |||||
28817165-G-A | 26671018-G-A | A* | |||||||
13470609-A-C | 11314933-A-C | A* | |||||||
6363850-A-C | 6495809-A-C | Z11505 | + | + | |||||
7283127-T-A | 7415086-T-A | Y45859 | Y | Y | + | + | |||
14359623-T-A | 12238918-T-A | BY95182 | Y | Y | + | + | |||
16868593-C-G | 14756713-C-G | BY110712 | Y | Y | + | + | |||
18199877-C-T | 16087997-C-T | BY120792 | Y | Y | + | + | |||
19215880-C-T | 17104000-C-T | BY127320 | Y | Y | + | + | |||
21080533-T-C | 18918647-T-C | BY130284 | Y | Y | + | + | |||
22026718-A-G | 19864832-A-G | BY137168 | Y | Y | + | + | |||
22440155-C-A | 20278269-C-A | BY218756 | DYZ19 | + | + | ||||
9898483-C-CA | 10060874-C-CA | + | + | ||||||
15203861-A-AAAC | 13091947-A-AAAC | 12×AAC | *** | * | |||||
7938961-A-G | 8070920-A-G | FT153254 | Y | Y | *** | * | |||
13668168-A-C | 11512492-A-C | *** | * | ||||||
22253772-G-A | 20091886-G-A | DYZ19 | *** | * | |||||
13842711-C-A | 11722005-C-A | * | |||||||
13489828-C-G | 11334152-C-G | * | |||||||
22439974-A-G | 20278088-A-G | DYZ19 | * | ||||||
9707941-C-G | 9870332-C-G | BY46734 | IR3_Prx | ** | |||||
22284050-A-T | 20122164-A-T | BY10060 | DYZ19 | ** | |||||
15542689-T-G | 13430809-T-G | ** | |||||||
14259647-A-G | 12138941-A-G | CTS2321 | ** | ||||||
14610673-A-C | 12498875-A-C | ** | |||||||
14825824-CTTTTTTT-C | 12713891-CTTTTTTT-C | 18×T | ** | ||||||
7392188-TTGTG-T | 7524147-TTGTG-T | 20×TG | ** | ||||||
25246447-C-T | 23100300-C-T | P2_r1 | 41×T | ** | |||||
4408904-G-A | 4540863-G-A | 13×A | ** | ||||||
19537923-G-A | 17426043-G-A | ** | |||||||
59023859-T-C | 56877712-T-C | ** | |||||||
17363140-C-A | 15251260-C-A | ** | |||||||
9952535-T-C | 10114926-T-C | ** | |||||||
15219031-T-C | 13107117-T-C | ** | |||||||
25246444-C-T | 23100297-C-T | P2_r1 | ** | ||||||
26124420-T-C | 23978273-T-C | P1_Y1 | ** | ||||||
16601630-A-T | 14489750-A-T | 17×AT | ** | ||||||
3550543-C-A | 3682502-C-A | ** | |||||||
22487736-C-T | 20325850-C-T | DYZ19 | ** | ||||||
21552180-CAT-C | 19390294-CAT-C | ** | |||||||
13466325-C-A | 11310649-C-A | ** | |||||||
23181452-C-A | 21019566-C-A | ** | |||||||
7723948-CTTT-C | 7855907-CTTT-C | 25×T | ** | ||||||
6359095-CAA-C | 6491054-CAA-C | 30×A | ** | ||||||
23181437-G-C | 21019551-G-C | ** | |||||||
27916422-C-A | 25770275-C-A | P1_Y2 | ** | ||||||
11001437-T-TGCC | ** | ||||||||
10934891-T-TC | ** | ||||||||
10901613-A-G | ** | ||||||||
10901614-C-T | ** | ||||||||
10901624-T-C | ** | ||||||||
10901629-T-G | ** | ||||||||
10901644-T-C | ** | ||||||||
10959854-G-C | ** | ||||||||
56724776-A-T | ** | ||||||||
5612686-C-A | 5744645-C-A | ** | |||||||
10679014-C-A | ** | ||||||||
10679019-T-C | ** | ||||||||
10860784-A-T | ** | ||||||||
16480366-T-C | 14368486-T-C | FT312632 | ** | ||||||
14389893-C-A | 12269189-C-A | ** | |||||||
10773146-C-T | ** | ||||||||
10817940-C-CACTCT | ** | ||||||||
10817956-A-C | ** | ||||||||
10817960-T-C | ** | ||||||||
10817961-A-C | ** | ||||||||
18101941-A-G | 15990061-A-G | ** | |||||||
10655060-T-A | ** | ||||||||
10655064-T-C | ** | ||||||||
10655068-C-A | ** | ||||||||
10655069-C-T | ** | ||||||||
3603238-C-A | 3735197-C-A | ** | |||||||
24421115-T-G | 22274968-T-G | ** | |||||||
10666998-C-A | ** | ||||||||
14195214-CAAA-C | 12074508-CAAA-C | 17×A | ** | ||||||
10792734-A-C | ** | ||||||||
15503459-C-A | 13391579-C-A | ** | |||||||
10662001-C-A | ** | ||||||||
11001435-T-TCC | ** | ||||||||
13222151-A-G | 11066475-A-G | ** | |||||||
7282320-C-A | 7414279-C-A | ** | |||||||
27952091-GTATATATATA-G | 25805944-GTATATATATA-G | P1_Y2 | 19×TA | ** | |||||
14295163-CTTTT-C | 12174457-CTTTT-C | 13×T | ** | ||||||
14463663-C-A | 12342936-C-A | ** | |||||||
10655088-C-A | ** | ||||||||
10655095-A-C | ** | ||||||||
10655096-T-G | ** | ||||||||
11025024-T-A | ** | ||||||||
10768542-C-T | FT430366 | ** | |||||||
9623314-G-GA | 9785705-G-GA | IR3_Prx | 9×A | ** | |||||
10841928-T-C | ** | ||||||||
10998028-A-C | ** | ||||||||
14073977-C-A | 11953271-C-A | ** | |||||||
10959819-C-CCACTG | ** | ||||||||
4510071-C-A | 4642030-C-A | ** | |||||||
10943066-C-T | ** | ||||||||
10943069-A-ATTCTCTCGTCTCTAT | ** | ||||||||
10943079-C-T | ** | ||||||||
10943084-C-T | ** | ||||||||
10943124-C-T | ** | ||||||||
10943126-G-C | ** | ||||||||
18867339-C-CT | 16755459-C-CT | 24×T | ** | ||||||
17203540-C-A | 15091660-C-A | ** | |||||||
13960510-C-A | 11839804-C-A | ** | |||||||
17092796-ATT-A | 14980916-ATT-A | 13×T | ** | ||||||
11019117-TCCTTTC-T | ** | ||||||||
11019126-G-GT | ** | ||||||||
10666593-T-C | ** | ||||||||
10666597-A-C | ** | ||||||||
14006638-C-A | 11885932-C-A | ** | |||||||
8907962-C-A | 9039921-C-A | ** | |||||||
11010385-T-A | ** | ||||||||
11010392-CCATTTCTTTA-C | ** | ||||||||
15971709-TTGTG-T | 13859829-TTGTG-T | 16×TG | ** | ||||||
56825733-G-T | ** | ||||||||
10998010-T-A | ** | ||||||||
10776095-C-G | ** | ||||||||
11030059-C-A | ** | ||||||||
10992201-T-C | ** | ||||||||
10992213-C-G | ** | ||||||||
10992218-C-T | ** | ||||||||
16041986-C-A | 13930106-C-A | ** | |||||||
7043885-C-A | 7175844-C-A | ** | |||||||
28724927-GT-G | 26578780-GT-G | 9×T | ** | ||||||
9965999-A-G | 10128390-A-G | ** | |||||||
14776948-C-A | 12665017-C-A | ** | |||||||
4510093-C-A | 4642052-C-A | ** | |||||||
14485779-C-A | 12365048-C-A | ** | |||||||
10766169-C-A | ** | ||||||||
14933682-C-A | 12821747-C-A | ** | |||||||
10982303-T-A | ** | ||||||||
9956325-C-A | 10118716-C-A | ** | |||||||
4447798-C-A | 4579757-C-A | ** | |||||||
11023021-C-A | ** | ||||||||
13222146-A-G | 11066470-A-G | ** | |||||||
14610578-C-A | 12498780-C-A | ** | |||||||
4366636-C-A | 4498595-C-A | ** | |||||||
11033690-C-T | ** | ||||||||
11033702-A-ACTGCACTCCG | ** | ||||||||
13860492-T-A | 11739786-T-A | ** | |||||||
13884782-C-A | 11764076-C-A | ** | |||||||
7152977-C-A | 7284936-C-A | ** | |||||||
15212544-C-A | 13100630-C-A | ** | |||||||
10761507-C-A | ** | ||||||||
13855795-AAATGG-A | 11735089-AAATGG-A | ** | |||||||
28798735-C-A | 26652588-C-A | ** | |||||||
14806103-C-A | 12694174-C-A | ** | |||||||
14959576-T-A | 12847651-T-A | ** | |||||||
14517759-C-A | 12405960-C-A | ** | |||||||
8237367-C-A | 8369326-C-A | ** | |||||||
20420663-G-T | 18258777-G-T | P5_Dst | ** | ||||||
13941724-T-C | 11821018-T-C | ** | |||||||
13941729-C-T | 11821023-C-T | ** | |||||||
10761532-T-C | FT430049 | ** | |||||||
10986428-C-A | ** | ||||||||
10034448-C-A | 10196839-C-A | ** | |||||||
56837336-G-T | ** | ||||||||
16205703-C-A | 14093823-C-A | ** | |||||||
6976480-C-A | 7108439-C-A | ** | |||||||
10922319-C-A | ** | ||||||||
17382347-C-A | 15270467-C-A | ** | |||||||
7287908-C-A | 7419867-C-A | ** | |||||||
10976153-GCATTC-G | ** | ||||||||
20700705-A-AG | 18538819-A-AG | P4_Prx | ** | ||||||
14693864-C-A | 12581930-C-A | ** | |||||||
10877997-T-C | ** | ||||||||
14559199-C-A | 12447400-C-A | ** | |||||||
10761540-T-C | ** | ||||||||
19062279-C-A | 16950399-C-A | ** | |||||||
7352966-C-A | 7484925-C-A | ** | |||||||
18390083-CAAAA-C | 16278203-CAAAA-C | P6_Gap | 19×A | ** | |||||
19532556-C-A | 17420676-C-A | ** | |||||||
13216595-C-A | 11060919-C-A | ** | |||||||
18343499-G-T | 16231619-G-T | P6_Prx | ** | ||||||
23333697-C-A | 21171811-C-A | ** | |||||||
5231912-TG-T | 5363871-TG-T | ** | |||||||
10934893-A-AGTTC | ** | ||||||||
15219014-G-A | 13107100-G-A | ** | |||||||
18189642-C-A | 16077762-C-A | ** | |||||||
56859776-A-T | ** | ||||||||
7061768-C-T | 7193727-C-T | ** | |||||||
2906885-C-A | 3038844-C-A | ** | |||||||
13198717-C-A | 11043041-C-A | ** | |||||||
10943029-C-T | FT44686 | ** | |||||||
10943031-G-C | ** | ||||||||
14283429-C-A | 12162723-C-A | ** | |||||||
17263117-G-A | 15151237-G-A | ** | |||||||
17263121-A-T | 15151241-A-T | ** | |||||||
8073299-C-A | 8205258-C-A | ** | |||||||
14227643-C-A | 12106937-C-A | ** | |||||||
18223949-C-A | 16112069-C-A | ** | |||||||
22263870-G-C | 20101984-G-C | DYZ19 | ** | ||||||
21828620-C-A | 19666734-C-A | ** | |||||||
11669549-C-A | ** | ||||||||
25246441-C-T | 23100294-C-T | P2_r1 | ** | ||||||
3492765-C-A | 3624724-C-A | ** | |||||||
10943037-C-T | ** | ||||||||
10943048-ACTTTT-A | ** | ||||||||
6816640-C-T | 6948599-C-T | ** | |||||||
10761520-T-C | ** | ||||||||
6010399-C-A | 6142358-C-A | ** | |||||||
17363217-C-A | 15251337-C-A | ** | |||||||
15533123-C-A | 13421243-C-A | ** | |||||||
7160460-C-A | 7292419-C-A | ** | |||||||
14100396-C-A | 11979690-C-A | ** | |||||||
13213867-C-A | 11058191-C-A | ** | |||||||
10900587-A-C | ** | ||||||||
15684269-C-A | 13572389-C-A | FTA50175 | ** | ||||||
4568346-C-A | 4700305-C-A | ** | |||||||
19088115-C-A | 16976235-C-A | ** | |||||||
10670958-C-A | ** | ||||||||
7990813-C-A | 8122772-C-A | ** | |||||||
11676355-T-C | ** | ||||||||
10959877-TTCTAG-T | ** | ||||||||
10959888-T-C | ** | ||||||||
10959894-C-A | ** | ||||||||
10959899-C-A | ** | ||||||||
10959901-A-T | ** | ||||||||
10959914-C-G | ** | ||||||||
10959915-T-C | FT438273 | ** | |||||||
10959919-C-G | ** | ||||||||
10959932-TC-T | ** | ||||||||
18483375-A-AG | 16371495-A-AG | P6_Dst | ** | ||||||
10683693-T-C | ** | ||||||||
11657650-A-G | ** | ||||||||
4690575-A-AT | 4822534-A-AT | 9×T | ** | ||||||
5293970-C-A | 5425929-C-A | ** | |||||||
10868041-C-A | ** | ||||||||
21713444-A-G | 19551558-A-G | ** | |||||||
14463451-C-A | 12342724-C-A | ** | |||||||
10829849-C-T | ** | ||||||||
18346614-A-G | 16234734-A-G | P6_Prx | ** | ||||||
19310232-C-A | 17198352-C-A | ** | |||||||
56761490-A-C | ** | ||||||||
56761500-C-G | ** | ||||||||
56842910-G-T | ** | ||||||||
11676413-A-T | ** | ||||||||
27647570-C-A | 25501423-C-A | P1_Y2 | ** | ||||||
23223424-C-A | 21061538-C-A | ** | |||||||
4075968-C-T | 4207927-C-T | FGC48750 | ** | ||||||
10805343-T-C | ** | ||||||||
6769911-C-A | 6901870-C-A | ** | |||||||
9034501-C-A | 9196892-C-A | ** | |||||||
13491093-C-A | 11335417-C-A | ** | |||||||
9076059-C-A | 9238450-C-A | ** | |||||||
10809590-A-T | ** | ||||||||
10818741-C-A | ** | ||||||||
7127446-C-A | 7259405-C-A | ** | |||||||
19330262-T-C | 17218382-T-C | ** | |||||||
13860521-G-A | 11739815-G-A | ** | |||||||
14273488-G-T | 12152782-G-T | ** | |||||||
14563267-C-A | 12451467-C-A | ** | |||||||
13474476-G-GC | 11318800-G-GC | ** | |||||||
4136503-C-A | 4268462-C-A | ** | |||||||
10954745-C-A | ** | ||||||||
14568248-C-A | 12456448-C-A | ** | |||||||
11669592-G-A | ** | ||||||||
2688849-C-T | 2820808-C-T | ** | |||||||
2688850-T-A | 2820809-T-A | ** | |||||||
2708587-G-A | 2840546-G-A | FT372855 | ** | ||||||
2745863-CA-C | 2877822-CA-C | ** | |||||||
2788476-C-A | 2920435-C-A | ** | |||||||
2790453-G-T | 2922412-G-T | ** | |||||||
2885540-C-A | 3017499-C-A | ** | |||||||
3122516-C-A | 3254475-C-A | ** | |||||||
3271087-C-T | 3403046-C-T | ** | |||||||
3286595-A-T | 3418554-A-T | ** | |||||||
3328996-A-T | 3460955-A-T | ** | |||||||
3346914-G-T | 3478873-G-T | ** | |||||||
3508166-C-A | 3640125-C-A | ** | |||||||
3602498-G-A | 3734457-G-A | ** | |||||||
3686446-G-T | 3818405-G-T | ** | |||||||
3844842-C-A | 3976801-C-A | ** | |||||||
3847370-A-C | 3979329-A-C | ** | |||||||
3852490-C-A | 3984449-C-A | ** | |||||||
3858426-C-A | 3990385-C-A | ** | |||||||
3934146-A-G | 4066105-A-G | ** | |||||||
3951513-C-A | 4083472-C-A | ** | |||||||
3951617-A-C | 4083576-A-C | ** | |||||||
3957642-A-G | 4089601-A-G | ** | |||||||
3990993-T-C | 4122952-T-C | ** | |||||||
4076010-G-A | 4207969-G-A | ** | |||||||
4076016-T-C | 4207975-T-C | ** | |||||||
4157242-C-T | 4289201-C-T | ** | |||||||
4271865-C-A | 4403824-C-A | ** | |||||||
4426059-A-T | 4558018-A-T | ** | |||||||
4554647-A-G | 4686606-A-G | ** | |||||||
4652950-C-A | 4784909-C-A | ** | |||||||
4659178-T-A | 4791137-T-A | ** | |||||||
4674597-C-A | 4806556-C-A | ** | |||||||
4690501-C-A | 4822460-C-A | FT173061 | ** | ||||||
4711523-G-T | 4843482-G-T | ** | |||||||
4756470-A-T | 4888429-A-T | ** | |||||||
4756992-C-T | 4888951-C-T | ** | |||||||
4907834-C-T | 5039793-C-T | ** | |||||||
4926143-G-T | 5058102-G-T | ** | |||||||
4937802-G-T | 5069761-G-T | ** | |||||||
5172413-C-T | 5304372-C-T | ** | |||||||
5175004-C-A | 5306963-C-A | ** | |||||||
5175019-C-A | 5306978-C-A | ** | |||||||
5204444-T-C | 5336403-T-C | ** | |||||||
5220021-T-A | 5351980-T-A | ** | |||||||
5235140-T-C | 5367099-T-C | ** | |||||||
5266886-A-G | 5398845-A-G | ** | |||||||
5287913-G-C | 5419872-G-C | ** | |||||||
5291750-G-T | 5423709-G-T | ** | |||||||
5311837-C-A | 5443796-C-A | ** | |||||||
5369055-C-A | 5501014-C-A | ** | |||||||
5494389-A-C | 5626348-A-C | ** | |||||||
5494409-A-T | 5626368-A-T | ** | |||||||
5577549-A-C | 5709508-A-C | ** | |||||||
5632186-G-C | 5764145-G-C | ** | |||||||
5632240-G-C | 5764199-G-C | ** | |||||||
5669043-A-G | 5801002-A-G | ** | |||||||
5691820-TTTTG-T | 5823779-TTTTG-T | ** | |||||||
5699034-G-T | 5830993-G-T | ** | |||||||
5702263-G-A | 5834222-G-A | ** | |||||||
5771753-C-T | 5903712-C-T | ** | |||||||
5778448-G-T | 5910407-G-T | ** | |||||||
5845371-T-C | 5977330-T-C | ** | |||||||
5905679-C-T | 6037638-C-T | ** | |||||||
6023047-C-A | 6155006-C-A | ** | |||||||
6065231-C-A | 6197190-C-A | ** | |||||||
6094569-G-T | 6226528-G-T | ** | |||||||
6097002-A-G | 6228961-A-G | ** | |||||||
6490694-C-A | 6622653-C-A | ** | |||||||
6541782-G-T | 6673741-G-T | ** | |||||||
6720490-A-T | 6852449-A-T | ** | |||||||
6749182-T-C | 6881141-T-C | ** | |||||||
6767612-A-G | 6899571-A-G | ** | |||||||
6771656-G-A | 6903615-G-A | ** | |||||||
6917687-C-A | 7049646-C-A | ** | |||||||
7062882-A-T | 7194841-A-T | ** | |||||||
7062896-G-T | 7194855-G-T | ** | |||||||
7062900-A-T | 7194859-A-T | ** | |||||||
7062910-A-C | 7194869-A-C | ** | |||||||
7062916-A-T | 7194875-A-T | ** | |||||||
7081434-A-T | 7213393-A-T | ** | |||||||
7107676-C-A | 7239635-C-A | ** | |||||||
7128219-G-T | 7260178-G-T | ** | |||||||
7204917-T-C | 7336876-T-C | ** | |||||||
7238974-C-A | 7370933-C-A | ** | |||||||
7270478-G-A | 7402437-G-A | ** | |||||||
7298813-G-C | 7430772-G-C | ** | |||||||
7314533-T-C | 7446492-T-C | ** | |||||||
7314534-T-C | 7446493-T-C | ** | |||||||
7369931-C-T | 7501890-C-T | ** | |||||||
7590624-T-C | 7722583-T-C | ** | |||||||
7641004-A-G | 7772963-A-G | ** | |||||||
7782911-A-T | 7914870-A-T | ** | |||||||
7866569-C-A | 7998528-C-A | ** | |||||||
7897178-G-T | 8029137-G-T | ** | |||||||
7969282-T-A | 8101241-T-A | ** | |||||||
7996008-G-T | 8127967-G-T | ** | |||||||
8067140-T-C | 8199099-T-C | ** | |||||||
8214150-C-A | 8346109-C-A | ** | |||||||
8293714-G-T | 8425673-G-T | ** | |||||||
8295577-C-G | 8427536-C-G | ** | |||||||
8349256-T-A | 8481215-T-A | FT128437 | ** | ||||||
8660360-C-A | 8792319-C-A | ** | |||||||
8901172-A-G | 9033131-A-G | ** | |||||||
8912819-G-A | 9044778-G-A | ** | |||||||
9076872-C-T | 9239263-C-T | ** | |||||||
9079332-A-G | 9241723-A-G | ** | |||||||
9513006-C-A | 9675397-C-A | ** | |||||||
9629126-G-T | 9791517-G-T | IR3_Prx | ** | ||||||
9629231-T-G | 9791622-T-G | IR3_Prx | ** | ||||||
9629233-G-GTT | 9791624-G-GTT | IR3_Prx | ** | ||||||
9769119-CA-C | 9931510-CA-C | ** | |||||||
9946121-A-G | 10108512-A-G | ** | |||||||
9998023-A-T | 10160414-A-T | ** | |||||||
10075093-G-T | 10237484-G-T | ** | |||||||
10750136-C-A | ** | ||||||||
10761474-A-T | ** | ||||||||
10761476-T-G | ** | ||||||||
10761502-T-TCTTTC | ** | ||||||||
10761521-T-C | ** | ||||||||
10788565-G-A | ** | ||||||||
10798541-C-T | ** | ||||||||
10803835-C-T | FTA51556 | ** | |||||||
10804954-C-T | ** | ||||||||
10804961-C-T | ** | ||||||||
10825175-C-A | ** | ||||||||
10825906-T-C | ** | ||||||||
10825911-A-C | ** | ||||||||
10825916-T-C | ** | ||||||||
10825920-A-C | ** | ||||||||
10825925-A-C | ** | ||||||||
10825926-A-C | ** | ||||||||
10825935-A-C | ** | ||||||||
10825938-T-C | ** | ||||||||
10825943-T-C | ** | ||||||||
10825948-T-C | ** | ||||||||
10834482-A-C | ** | ||||||||
10834603-A-G | ** | ||||||||
10837609-A-G | ** | ||||||||
10837615-G-C | ** | ||||||||
10837625-C-T | ** | ||||||||
10847236-G-A | ** | ||||||||
10877989-C-A | ** | ||||||||
10877992-T-C | ** | ||||||||
10900780-C-A | ** | ||||||||
10919494-G-T | ** | ||||||||
10919539-C-G | FGC80231 | ** | |||||||
10924759-A-T | ** | ||||||||
10931974-C-T | ** | ||||||||
10934010-C-A | ** | ||||||||
10937342-C-A | ** | ||||||||
10953566-A-G | ** | ||||||||
10959841-A-AT | ** | ||||||||
10959846-A-ATCCG | ** | ||||||||
10959858-TACA-T | ** | ||||||||
10959865-CAG-C | ** | ||||||||
10967300-A-G | ** | ||||||||
10973979-TTCCAG-T | ** | ||||||||
10984484-C-T | ** | ||||||||
10984522-G-A | ** | ||||||||
10998011-C-T | FT439746 | ** | |||||||
10998015-A-G | ** | ||||||||
10998021-A-G | ** | ||||||||
10998026-A-C | ** | ||||||||
10998035-A-ATTCTG | ** | ||||||||
11019588-C-A | ** | ||||||||
11026099-ACTCC-A | ** | ||||||||
11030436-C-A | ** | ||||||||
11033204-A-G | ** | ||||||||
11037130-C-CTCCAT | ** | ||||||||
11037155-C-A | ** | ||||||||
11037162-C-A | ** | ||||||||
11037183-C-A | ** | ||||||||
13198706-C-A | 11043030-C-A | ** | |||||||
13305559-G-T | 11149883-G-T | ** | |||||||
13309685-T-C | 11154009-T-C | ** | |||||||
13347391-G-T | 11191715-G-T | ** | |||||||
13461333-C-A | 11305657-C-A | ** | |||||||
13474491-G-T | 11318815-G-T | ** | |||||||
13505370-C-A | 11349694-C-A | ** | |||||||
13563315-CCAATAACAGGCTCTGAAATTGAGG-C | 11407639-CCAATAACAGGCTCTGAAATTGAGG-C | ** | |||||||
13576094-A-C | 11420418-A-C | ** | |||||||
13578444-C-G | 11422768-C-G | FT445734 | ** | ||||||
13625115-C-A | 11469439-C-A | ** | |||||||
13637474-C-G | 11481798-C-G | ** | |||||||
13709495-G-A | 11553819-G-A | ** | |||||||
11643916-T-G | ** | ||||||||
11657562-G-A | ** | ||||||||
11664260-C-A | ** | ||||||||
11676356-G-A | ** | ||||||||
11676364-A-G | ** | ||||||||
11676372-C-G | ** | ||||||||
11676384-C-G | ** | ||||||||
11676401-G-C | ** | ||||||||
11676402-G-C | ** | ||||||||
11676417-A-C | ** | ||||||||
11676432-G-A | ** | ||||||||
11676436-GGAATA-G | ** | ||||||||
11676456-G-T | ** | ||||||||
11676462-C-G | ** | ||||||||
11676463-A-T | ** | ||||||||
13860503-T-A | 11739797-T-A | ** | |||||||
13860504-A-G | 11739798-A-G | ** | |||||||
13860507-A-T | 11739801-A-T | ** | |||||||
13860509-A-G | 11739803-A-G | ** | |||||||
13883052-C-A | 11762346-C-A | ** | |||||||
13902810-CT-C | 11782104-CT-C | ** | |||||||
13908347-C-T | 11787641-C-T | ** | |||||||
13928189-T-G | 11807483-T-G | ** | |||||||
13929168-C-A | 11808462-C-A | ** | |||||||
13999229-A-G | 11878523-A-G | ** | |||||||
14034852-G-T | 11914146-G-T | ** | |||||||
14046655-C-A | 11925949-C-A | ** | |||||||
14065672-T-C | 11944966-T-C | ** | |||||||
14085983-T-C | 11965277-T-C | ** | |||||||
14146955-G-A | 12026249-G-A | ** | |||||||
14340884-C-A | 12220179-C-A | ** | |||||||
14356238-A-T | 12235533-A-T | ** | |||||||
14361596-T-C | 12240891-T-C | ** | |||||||
14373601-G-A | 12252897-G-A | ** | |||||||
14427475-A-C | 12306750-A-C | ** | |||||||
14456294-A-T | 12335567-A-T | ** | |||||||
14470354-C-A | 12349623-C-A | ** | |||||||
14473092-C-A | 12352361-C-A | ** | |||||||
12375847-T-C | ** | ||||||||
14597962-C-A | 12486162-C-A | ** | |||||||
14610685-T-C | 12498887-T-C | ** | |||||||
14693802-G-GA | 12581868-G-GA | 8×A | ** | ||||||
14695000-C-A | 12583066-C-A | ** | |||||||
14717545-G-T | 12605613-G-T | ** | |||||||
14724679-C-G | 12612747-C-G | ** | |||||||
14724765-C-A | 12612833-C-A | ** | |||||||
14858827-C-A | 12746893-C-A | ** | |||||||
14871280-A-G | 12759350-A-G | ** | |||||||
15011707-T-C | 12899795-T-C | ** | |||||||
15045431-C-G | 12933521-C-G | ** | |||||||
15065819-A-G | 12953911-A-G | ** | |||||||
15219020-A-T | 13107106-A-T | ** | |||||||
15219022-G-A | 13107108-G-A | FT264115 | ** | ||||||
15280374-C-A | 13168473-C-A | ** | |||||||
15302507-T-C | 13190606-T-C | ** | |||||||
15366938-G-T | 13255058-G-T | ** | |||||||
15452424-G-A | 13340544-G-A | ** | |||||||
15676976-CA-C | 13565096-CA-C | ** | |||||||
15699803-C-A | 13587923-C-A | ** | |||||||
15717793-A-G | 13605913-A-G | ** | |||||||
15762190-G-T | 13650310-G-T | ** | |||||||
15921401-A-T | 13809521-A-T | ** | |||||||
15921912-T-A | 13810032-T-A | ** | |||||||
15926913-C-A | 13815033-C-A | ** | |||||||
16032439-C-A | 13920559-C-A | ** | |||||||
16274282-C-A | 14162402-C-A | ** | |||||||
16277881-T-C | 14166001-T-C | ** | |||||||
16412875-C-A | 14300995-C-A | ** | |||||||
16588170-C-A | 14476290-C-A | ** | |||||||
16618813-T-C | 14506933-T-C | ** | |||||||
16620783-G-T | 14508903-G-T | ** | |||||||
16621374-C-G | 14509494-C-G | ** | |||||||
16636092-C-T | 14524212-C-T | ** | |||||||
16659017-C-A | 14547137-C-A | ** | |||||||
16688163-A-G | 14576283-A-G | ** | |||||||
16706194-G-A | 14594314-G-A | FT50618 | ** | ||||||
16738158-C-A | 14626278-C-A | ** | |||||||
16789678-C-A | 14677798-C-A | ** | |||||||
16816329-T-G | 14704449-T-G | ** | |||||||
16941629-C-A | 14829749-C-A | ** | |||||||
16973408-G-A | 14861528-G-A | ** | |||||||
17095473-T-C | 14983593-T-C | ** | |||||||
17177246-T-C | 15065366-T-C | ** | |||||||
17193073-C-A | 15081193-C-A | ** | |||||||
17199674-C-T | 15087794-C-T | ** | |||||||
17266355-G-T | 15154475-G-T | ** | |||||||
17490096-G-A | 15378216-G-A | ** | |||||||
17503981-G-T | 15392101-G-T | ** | |||||||
17561570-T-G | 15449690-T-G | ** | |||||||
17567535-C-A | 15455655-C-A | ** | |||||||
17700430-T-C | 15588550-T-C | ** | |||||||
17723607-C-A | 15611727-C-A | ** | |||||||
17775098-T-C | 15663218-T-C | ** | |||||||
17775108-T-A | 15663228-T-A | ** | |||||||
17775112-T-C | 15663232-T-C | ** | |||||||
17902957-A-G | 15791077-A-G | ** | |||||||
17916054-C-T | 15804174-C-T | ** | |||||||
18184832-A-G | 16072952-A-G | ** | |||||||
18323899-A-T | 16212019-A-T | P6_Prx | ** | ||||||
18412286-C-A | 16300406-C-A | FT46552 | P6_Gap | ** | |||||
18627497-T-C | 16515617-T-C | ** | |||||||
18859616-G-T | 16747736-G-T | ** | |||||||
18862049-G-T | 16750169-G-T | ** | |||||||
18947993-C-A | 16836113-C-A | ** | |||||||
18948223-C-A | 16836343-C-A | ** | |||||||
18951487-C-A | 16839607-C-A | ** | |||||||
19055497-G-A | 16943617-G-A | FT129120 | ** | ||||||
19161130-C-A | 17049250-C-A | ** | |||||||
19298920-T-C | 17187040-T-C | ** | |||||||
19539788-C-A | 17427908-C-A | ** | |||||||
19552587-C-A | 17440707-C-A | ** | |||||||
20442507-T-A | 18280621-T-A | P5_Dst | ** | ||||||
20809564-A-G | 18647678-A-G | P4_Gap | ** | ||||||
21108894-G-T | 18947008-G-T | ** | |||||||
21153983-C-A | 18992097-C-A | ** | |||||||
21154595-T-C | 18992709-T-C | ** | |||||||
21182409-T-A | 19020523-T-A | ** | |||||||
21576022-G-T | 19414136-G-T | ** | |||||||
21617705-G-A | 19455819-G-A | ** | |||||||
21840049-T-C | 19678163-T-C | ** | |||||||
22269694-AG-A | 20107808-AG-A | DYZ19 | ** | ||||||
22518056-C-A | 20356170-C-A | ** | |||||||
22542215-A-G | 20380329-A-G | ** | |||||||
22614932-A-C | 20453046-A-C | ** | |||||||
22640358-C-A | 20478472-C-A | ** | |||||||
22809695-C-A | 20647809-C-A | ** | |||||||
22988672-C-A | 20826786-C-A | ** | |||||||
23006713-A-G | 20844827-A-G | ** | |||||||
23127730-T-A | 20965844-T-A | ** | |||||||
23311282-T-C | 21149396-T-C | ** | |||||||
23434456-C-A | 21272570-C-A | ** | |||||||
23600310-A-G | 21438424-A-G | ** | |||||||
23788405-G-T | 21626519-G-T | ** | |||||||
24390020-C-T | 22243873-C-T | ** | |||||||
24402217-T-C | 22256070-T-C | ** | |||||||
24435513-G-A | 22289366-G-A | ** | |||||||
24466389-C-A | 22320242-C-A | ** | |||||||
26080921-C-CAG | 23934774-C-CAG | P1_Y1 | 12×A | ** | |||||
26248257-C-A | 24102110-C-A | P1_Y1 | ** | ||||||
27966226-T-TG | 25820079-T-TG | P1_Y2 | ** | ||||||
28111791-G-T | 25965644-G-T | P1_Y2 | ** | ||||||
28475547-G-A | 26329400-G-A | ** | |||||||
28479055-C-A | 26332908-C-A | ** | |||||||
28507476-C-A | 26361329-C-A | ** | |||||||
28575273-C-A | 26429126-C-A | ** | |||||||
28596788-T-C | 26450641-T-C | ** | |||||||
28620157-A-C | 26474010-A-C | ** | |||||||
28636020-T-C | 26489873-T-C | ** | |||||||
28689215-C-A | 26543068-C-A | ** | |||||||
28699836-C-A | 26553689-C-A | ** | |||||||
28708894-AT-A | 26562747-AT-A | ** | |||||||
28738220-G-T | 26592073-G-T | ** | |||||||
28739416-T-C | 26593269-T-C | ** | |||||||
28756179-C-A | 26610032-C-A | ** | |||||||
28798530-C-A | 26652383-C-A | ** | |||||||
56838587-C-T | ** | ||||||||
22147806-T-C | 19985920-T-C | BY212991 | *** | ||||||
9334568-C-T | 9496959-C-T | *** | |||||||
13143784-GCACTGCACAT-G | 10633270-GCACTGCACAT-G | *** | |||||||
13825038-C-G | 11704332-C-G | *** | |||||||
22147730-CTTTCTTTTCTTTTCTTTTCT-C | 19985844-CTTTCTTTTCTTTTCTTTTCT-C | 19×TTTCT | *** | ||||||
58988416-G-A | 56842269-G-A | *** | |||||||
13143363-C-G | 10632849-C-G | *** | |||||||
8771299-A-C | 8903258-A-C | BY75770 | *** | ||||||
13470558-C-A | 11314882-C-A | *** | |||||||
20819997-TC-T | 18658111-TC-T | P4_Gap | *** | ||||||
18098741-C-CT | 15986861-C-CT | 10×T | *** | ||||||
10020467-AGGAAAGGAAAG-A | 10182858-AGGAAAGGAAAG-A | *** | |||||||
22319978-A-T | 20158092-A-T | DYZ19 | *** | ||||||
25015611-T-A | 22869464-T-A | g1 | *** | ||||||
25324312-C-T | 23178165-C-T | P2_r1 | *** | ||||||
26915625-T-A | 24769478-T-A | P1_r3 | *** | ||||||
13664697-A-AGAAAC | 11509021-A-AGAAAC | 10×GGAAT | *** | ||||||
13448805-A-C | 11293129-A-C | *** | |||||||
15677522-C-A | 13565642-C-A | BY54753 | *** | ||||||
16364058-C-CTA | 14252178-C-CTA | 27×TA | *** | ||||||
13845541-AAATGGAATGGAATGGAATGG-A | 11724835-AAATGGAATGGAATGGAATGG-A | 8×AATGG | *** | ||||||
18354236-GGAAAGAAA-G,GGAAA | 16242356-GGAAAGAAA-G,GGAAA | P6_Prx | 13×GAAA | *** | |||||
10934873-C-T | *** | ||||||||
10987849-C-G | *** | ||||||||
10787429-G-C | *** | ||||||||
10787430-T-C | *** | ||||||||
10787437-A-G | FT431206 | *** | |||||||
15746849-A-G | 13634969-A-G | *** | |||||||
28801399-A-AACGAAGTT | 26655252-A-AACGAAGTT | *** | |||||||
11669639-T-A | *** | ||||||||
10787442-T-TTCCTG | *** | ||||||||
10787457-A-T | *** | ||||||||
10787460-C-G | *** | ||||||||
14916890-CA-C,CAA | 12804957-CA-C,CAA | 15×A | *** | ||||||
15078102-CTTT-C | 12966192-CTTT-C | 14×T | *** | ||||||
13489814-G-T | 11334138-G-T | *** | |||||||
10780602-G-A | *** | ||||||||
10786190-C-A | *** | ||||||||
10763146-C-T | *** | ||||||||
3804732-CAAAAAA-C | 3936691-CAAAAAA-C | 29×A | *** | ||||||
56842257-T-G | *** | ||||||||
56842261-G-C | *** | ||||||||
18753196-G-T | 16641316-G-T | *** | |||||||
10671649-C-A | *** | ||||||||
14180919-G-A | 12060213-G-A | *** | |||||||
10934872-G-A,C | *** | ||||||||
17673101-C-A | 15561221-C-A | *** | |||||||
56842331-C-T | *** | ||||||||
8980042-G-T | 9142433-G-T | *** | |||||||
10964331-C-A | *** | ||||||||
13618227-C-A | 11462551-C-A | *** | |||||||
2840099-CAAAAAAA-C,CAAAAA | 2972058-CAAAAAAA-C,CAAAAA | 20×A | *** | ||||||
2895071-G-T | 3027030-G-T | *** | |||||||
6888499-G-T | 7020458-G-T | *** | |||||||
9907551-G-T | 10069942-G-T | *** | |||||||
9996186-C-A | 10158577-C-A | *** | |||||||
10005866-C-T | 10168257-C-T | *** | |||||||
10033699-C-A | 10196090-C-A | *** | |||||||
10744815-C-A | *** | ||||||||
10825185-C-A | *** | ||||||||
10859648-T-C | *** | ||||||||
10859657-C-T | *** | ||||||||
10859669-C-A | *** | ||||||||
10892553-C-CGGAAG | *** | ||||||||
10982277-A-G | *** | ||||||||
13236394-T-C | 11080718-T-C | *** | |||||||
13468256-A-G | 11312580-A-G | *** | |||||||
13644992-TG-T | 11489316-TG-T | *** | |||||||
11669629-G-GGAATC | *** | ||||||||
11669642-A-AT | *** | ||||||||
13799229-G-C | 11678523-G-C | *** | |||||||
14061366-ATTT-A,AT | 11940660-ATTT-A,AT | 17×T | *** | ||||||
14180927-G-A | 12060221-G-A | *** | |||||||
14685903-A-T | 12573969-A-T | *** | |||||||
14914651-C-A | 12802718-C-A | *** | |||||||
18673871-C-G | 16561991-C-G | *** | |||||||
18838596-C-G | 16726716-C-G | *** | |||||||
18961581-G-A | 16849701-G-A | FT59541 | *** | ||||||
23192041-A-G | 21030155-A-G | *** | |||||||
23343564-C-A | 21181678-C-A | *** | |||||||
56842310-G-C | *** | ||||||||
56842322-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.