Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > DF21/S192 > Z30233 > FGC3903/S5201 > S5199

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
DQWHW
Manual
Edits
8201816-G-C 8333775-G-C FGC9738 YY+
21107017-G-C 18945131-G-C FGC9759 YY+
23475828-A-G 21313942-A-G FGC9764 YY+
4786391-A-C 4918350-A-C FGC9728 +
4645917-T-C 4777876-T-C FGC9727 +
15741940-T-C 13630060-T-C FGC9747 Y+
15527799-C-A 13415919-C-A FGC9746 YY+
4294975-A-G 4426934-A-G FGC9726 +
4006625-A-G 4138584-A-G FGC9725 +
3700701-T-C 3832660-T-C FGC9724 +
3111855-G-C 3243814-G-C FGC9723 +
5197050-C-T 5329009-C-T FGC9731 +
2720269-G-T 2852228-G-T FGC9722 YY+
13230169-C-T 11074493-C-T FGC9743 +
8401812-A-G 8533771-A-G FGC9739 YY+
24477161-C-A 22331014-C-A FGC9769 Y+
13585799-C-G 11430123-C-G FGC9744 +
14452242-C-T 12331515-C-T Z1928 CTS2733 YY+
23612898-C-T 21451012-C-T FGC9767 YY+
23597414-A-C 21435528-A-C FGC9766 YY+
4884731-G-A 5016690-G-A FGC9730 +
23593283-G-T 21431397-G-T FGC9765 YY+
5254474-G-C 5386433-G-C FGC9732 +
16964678-G-A 14852798-G-A FGC9748 YY+
7793619-A-G 7925578-A-G FGC9737 YY+
8467659-C-T 8599618-C-T FGC9740 YY+
9140126-C-T 9302517-C-T FGC9741 Y+
18029748-T-C 15917868-T-C FGC9752 Y+
17840088-G-T 15728208-G-T FGC9751 Y+
17600725-C-T 15488845-C-T FGC9750 YY+
9381184-G-A 9543575-G-A FGC9742 Y+
22474230-G-A 20312344-G-A FGC9762 DYZ19 +
18565386-C-A 16453506-C-A FGC9753 YY+
6516530-G-A 6648489-G-A FGC9736 +
18609107-C-T 16497227-C-T FGC9754 YY+
6492875-T-G 6624834-T-G FGC9735 +
7718394-TC-T 7850353-TC-T FGC9772 +
6008401-C-G 6140360-C-G FGC9734 +
18879236-T-A 16767356-T-A FGC9756 Y+
19233294-A-G 17121414-A-G FGC9757 YY+
5718656-G-T 5850615-G-T FGC9733 +
28481585-A-G 26335438-A-G FGC9771 +
21060794-G-T 18898908-G-T FGC9758 Y*
21895458-A-G 19733572-A-G FGC9760 YY*
21968949-G-C 19807063-G-C FGC9761 Y*
25504931-G-C 23358784-G-C FGC9770 P1_gr1 *
24153749-G-A 22007602-G-A FGC9768 P3_b1 *
4826862-G-A 4958821-G-A FGC9729 *
13698281-C-A 11542605-C-A FGC9745 *
23279957-C-G 21118071-C-G FGC9763 YY*
17557225-C-T 15445345-C-T FGC9749 YY*
18687686-T-A 16575806-T-A FGC9755 ZS4150 YY*
20143682-A-T 18031802-A-T FGC9721 P5_Dst *
22236770-C-A 20074884-C-A DYZ19 **
25505344-A-C 23359197-A-C P1_gr1 **
2888606-T-TC 3020565-T-TC **
4182484-G-GT 4314443-G-GT 9×T**
28583050-T-C 26436903-T-C **
22198535-C-T 20036649-C-T **
22090749-G-T 19928863-G-T **
23230387-A-T 21068501-A-T **
16897643-C-CAAAAAAAAAAAAAA 14785763-C-CAAAAAAAAAAAAAA 23×A**
2888593-T-C 3020552-T-C Y38494 **
2888601-G-C 3020560-G-C YFS068755 **
28496348-CAAAAA-C 26350201-CAAAAA-C 18×A**
22476887-T-C 20315001-T-C DYZ19 **
7534382-GT-G 7666341-GT-G 9×T**
22479538-A-C 20317652-A-C DYZ19 **
22256285-T-A 20094399-T-A DYZ19 **
22476706-C-G 20314820-C-G DYZ19 **
22475516-C-G 20313630-C-G DYZ19 **
10030917-T-A 10193308-T-A **
22297915-G-T 20136029-G-T DYZ19 **
10030908-T-C 10193299-T-C **
10030901-A-T 10193292-A-T **
9420138-ATATTATTATTATTAT-A 9582529-ATATTATTATTATTAT-A 14×TAT**
22256646-G-T 20094760-G-T DYZ19 **
18524714-A-T 16412834-A-T P6_Dst **
3550568-AC-A,AA 3682527-AC-A,AA **
21551821-A-ATATG 19389935-A-ATATG **
18297876-C-CTTTTT 16185996-C-CTTTTT P6_Prx 31×T**
22256307-A-C 20094421-A-C DYZ19 **
23843594-TTATCTATC-T 21681708-TTATCTATC-T 10×TATC**
13477365-T-C 11321689-T-C **
2888600-T-C 3020559-T-C L654L654 **
22298161-T-C 20136275-T-C DYZ19 **
25505303-T-G 23359156-T-G FGC58638 P1_gr1 **
3374048-CATAAA-C 3506007-CATAAA-C 10×ATAAA**
27897275-G-T 25751128-G-T FGCLR101 P1_Y2 **
13411435-T-G 11255759-T-G **
21551917-A-G 19390031-A-G PF1815 **
14232805-TTCTC-T 12112099-TTCTC-T **
8379577-C-CTG 8511536-C-CTG 18×TG**
59027563-C-G 56881416-C-G **
59027562-C-T 56881415-C-T **
22256312-C-T 20094426-C-T DYZ19 **
22256342-C-T 20094456-C-T DYZ19 **
58859194-A-T 56731677-T-A ***
58838400-C-A 56752471-G-T ***
58859212-C-A 56731659-G-T ***
58882587-G-T 56708284-C-A ***
58884982-T-A 56705889-A-T ***
58859215-A-T 56731656-T-A ***
58885556-G-C 56705315-C-G ***
58859226-G-A 56731645-C-T ***
58831263-T-C 56759608-A-G ***
58831276-A-T 56759595-T-A ***
58866449-A-G 56724422-T-C ***
58836772-C-G 56754099-G-C ***
58856174-C-T 56734697-G-A ***
58831285-C-T 56759586-G-A ***
58831279-T-G 56759592-A-C ***
58859216-G-C 56731655-C-G ***
58867467-A-G 56723404-T-C ***
58838435-T-A 56752436-A-T ***
58847666-T-A 56743205-A-T ***
58870791-A-G 56720080-T-C ***
58843765-G-A 56747106-C-T ***
58843857-G-T 56747014-C-A ***
58843871-A-G 56747000-T-C ***
58844277-T-G 56746594-A-C ***
58843750-A-T 56747121-T-A ***
58843749-T-C 56747122-A-G ***
58843740-A-C 56747131-T-G ***
58844281-G-C 56746590-C-G ***
58870580-G-T 56720291-C-A ***
58844282-C-A 56746589-G-T ***
58841101-G-A 56749770-C-T ***
58838424-G-C 56752447-C-G ***
58841085-A-C 56749786-T-G ***
58874495-C-A 56716376-G-T ***
58874519-T-C 56716352-A-G ***
58874539-A-C 56716332-T-G ***
58874565-T-A 56716306-A-T ***
58874571-A-T 56716300-T-A ***
58877037-T-C 56713834-A-G ***
58840722-C-A 56750149-G-T ***
58838991-A-T 56751880-T-A ***
58881812-A-T 56709059-T-A ***
58868568-A-T 56722303-T-A ***
58847355-G-A 56743516-C-T ***
27906198-T-A 25760051-T-A P1_Y2 ***
58831257-C-A 56759614-G-T ***
22637028-G-A 20475142-G-A ***
22488347-T-C 20326461-T-C DYZ19 ***
22488377-T-A 20326491-T-A DYZ19 ***
22488436-T-A 20326550-T-A DYZ19 ***
22488459-T-C 20326573-T-C DYZ19 ***
22496058-T-A 20334172-T-A DYZ19 ***
22504103-G-A 20342217-G-A DYZ19 ***
22637051-T-A 20475165-T-A ***
22481705-T-G 20319819-T-G DYZ19 ***
22637052-T-G 20475166-T-G ***
23181247-C-T 21019361-C-T ***
23673812-A-G 21511926-A-G ***
24278372-G-T 22132225-G-T P3_b1 ***
24295607-T-C 22149460-T-C P3_t1 ***
24488662-T-A 22342515-T-A ***
24488670-T-C 22342523-T-C ***
22481758-T-G 20319872-T-G DYZ19 ***
22481701-G-T 20319815-G-T DYZ19 ***
25870883-C-A 23724736-C-A P1_Y1 ***
22420975-C-G 20259089-C-G DYZ19 ***
22367204-A-G 20205318-A-G DYZ19 ***
22367219-C-G 20205333-C-G DYZ19 ***
22367227-T-G 20205341-T-G DYZ19 ***
22367253-C-G 20205367-C-G DYZ19 ***
22420728-T-G 20258842-T-G DYZ19 ***
22420952-T-C 20259066-T-C DYZ19 ***
22421209-G-T 20259323-G-T DYZ19 ***
22481031-G-T 20319145-G-T DYZ19 ***
22421293-A-G 20259407-A-G DYZ19 ***
22421711-A-G 20259825-A-G DYZ19 ***
22421761-C-T 20259875-C-T DYZ19 ***
22421928-T-C 20260042-T-C DYZ19 ***
22421952-G-T 20260066-G-T DYZ19 ***
22456696-T-A 20294810-T-A DYZ19 ***
22480951-G-A 20319065-G-A DYZ19 ***
25429934-C-T 23283787-C-T P2_r2 ***
26140458-A-T 23994311-A-T P1_Y1 ***
58831256-C-G 56759615-G-C ***
58822928-A-T 56767943-T-A ***
28387669-C-A 26241522-C-A P1_gr2 4×AACAA***
28391563-G-A 26245416-G-A P1_gr2 ***
28391574-G-A 26245427-G-A P1_gr2 ***
28478034-T-G 26331887-T-G ***
28478036-T-G 26331889-T-G ***
28802746-T-A 26656599-T-A ***
58822933-C-T 56767938-G-A ***
27810119-T-C 25663972-T-C P1_Y2 ***
58822941-C-T 56767930-G-A ***
58822946-G-T 56767925-C-A ***
58822964-A-T 56767907-T-A ***
58823336-C-G 56767535-G-C ***
58831243-G-C 56759628-C-G ***
58831251-T-C 56759620-A-G ***
58831255-C-T 56759616-G-A ***
58892315-T-A 56698556-A-T ***
27525243-C-T 25379096-C-T P1_Y2 27×T***
26161461-A-T 24015314-A-T P1_Y1 ***
26462583-C-T 24316436-C-T P1_Y1 ***
26161465-G-T 24015318-G-T P1_Y1 ***
26161471-A-T 24015324-A-T P1_Y1 ***
26349869-T-A 24203722-T-A P1_Y1 ***
26462563-T-C 24316416-T-C P1_Y1 ***
26462568-T-C 24316421-T-C P1_Y1 ***
26462572-T-C 24316425-T-C P1_Y1 ***
26462573-G-A 24316426-G-A P1_Y1 ***
26508288-C-G 24362141-C-G P1_Y1 ***
27508760-A-C 25362613-A-C P1_Y2 ***
27343994-G-C 25197847-G-C P1_g3 ***
27501496-T-C 25355349-T-C P1_Y2 ***
27508618-A-C 25362471-A-C P1_Y2 ***
27508645-T-C 25362498-T-C P1_Y2 ***
27508662-G-C 25362515-G-C P1_Y2 ***
27508670-T-C 25362523-T-C P1_Y2 ***
27508671-G-A 25362524-G-A P1_Y2 ***
58890005-A-C 56700866-T-G ***
20203486-C-T 18041600-C-T FGC61355 P5_Dst ***
58895199-C-A 56695672-G-T ***
22341141-GTG-ATT 20179255-GTG-ATT DYZ19 ***
22291985-TTTG-ATTT 20130099-TTTG-ATTT DYZ19 ***
22292116-CCT-ACA 20130230-CCT-ACA DYZ19 ***
22297819-AGACCTT-A 20135933-AGACCTT-A DYZ19 ***
22297828-C-CT 20135942-C-CT DYZ19 ***
22298120-CTCCT-TTCCA 20136234-CTCCT-TTCCA DYZ19 ***
22298129-GTGTGTCCAGAA-ATTTGCATAGAG 20136243-GTGTGTCCAGAA-ATTTGCATAGAG DYZ19 ***
22341656-GA-AG 20179770-GA-AG DYZ19 ***
22291954-TTTGCAGCACTT-GTTTCAGAAATG 20130068-TTTGCAGCACTT-GTTTCAGAAATG DYZ19 ***
22341680-C-CT 20179794-C-CT DYZ19 ***
22343078-GCACA-TCATT 20181192-GCACA-TCATT DYZ19 ***
22353012-GG-AT 20191126-GG-AT DYZ19 ***
22357242-G-GA 20195356-G-GA DYZ19 ***
22361069-CA-C 20199183-CA-C DYZ19 ***
22361130-CA-GC 20199244-CA-GC DYZ19 ***
22361163-GT-AC 20199277-GT-AC DYZ19 ***
22291970-TTGT-ATGC 20130084-TTGT-ATGC DYZ19 ***
22291943-CAGT-TTAC 20130057-CAGT-TTAC DYZ19 ***
22367929-CATG-GATT 20206043-CATG-GATT DYZ19 ***
22235304-TC-T 20073418-TC-T DYZ19 ***
19847401-ATAGTA-TCAGTG 17735521-ATAGTA-TCAGTG P5_Prx ***
20540879-CTTAA-TTTAG 18378993-CTTAA-TTTAG P5_Dst ***
20540960-GG-AA 18379074-GG-AA P5_Dst ***
20541008-CT-TG 18379122-CT-TG P5_Dst ***
21306590-C-CAAAAAAAAA 19144704-C-CAAAAAAAAA 27×A***
21551818-C-CATAT 19389932-C-CATAT ***
22232108-GTTC-AGTG 20070222-GTTC-AGTG DYZ19 ***
22235838-AACCT-CACCG 20073952-AACCT-CACCG DYZ19 ***
22291932-GCTGC-TCTGT 20130046-GCTGC-TCTGT DYZ19 ***
22236408-AT-TG 20074522-AT-TG DYZ19 ***
22236575-GTGCTGTG-ATGATGTA 20074689-GTGCTGTG-ATGATGTA DYZ19 ***
22252883-ATGA-GTGT 20090997-ATGA-GTGT DYZ19 ***
22268293-AGTGGTGACC-GGTGTTGAGT 20106407-AGTGGTGACC-GGTGTTGAGT DYZ19 ***
22268478-A-ACC 20106592-A-ACC DYZ19 ***
22291721-TTT-GTG 20129835-TTT-GTG DYZ19 ***
22291909-GTC-TTA 20130023-GTC-TTA DYZ19 ***
22365847-GTGAG-TTGAA 20203961-GTGAG-TTGAA DYZ19 ***
22420995-TG-AT 20259109-TG-AT DYZ19 ***
18937647-GCAATACAATACAATA-G 16825767-GCAATACAATACAATA-G 13×CAATA***
22237314-C-AA 20075428-C-AA DYZ19 ***
58870601-A-AT 56720268-G-GA ***
58907512-TTCCC-GTCCA 56683355-GGGAA-TGGAC ***
16908473-G-AAAA 14796593-G-AAAA ***
58823281-CCATCT-C 56767581-AATGAG-A ***
16478378-G-AA 14366498-G-AA ***
22495773-TCCAA-CTTCAG 20333887-TCCAA-CTTCAG DYZ19 ***
13314524-CCC-G 11158848-CCC-G ***
58870562-TGTATTTCA-T 56720300-ATGAAATAC-A ***
22236464-CCCACCAAG-ACAACTAA 20074578-CCCACCAAG-ACAACTAA DYZ19 ***
25505344-ACCGT-CCCG 23359197-ACCGT-CCCG P1_gr1 ***
13258251-GAC-TA 11102575-GAC-TA ***
28478034-TATAT-GAGAG 26331887-TATAT-GAGAG ***
58909147-CTC-GTT 56681722-GAG-AAC ***
22291755-GCAG-CC 20129869-GCAG-CC DYZ19 ***
22234912-AC-TG 20073026-AC-TG DYZ19 ***
58870586-TAATTCGAGCCAC-T 56720272-GGTGGCTCGAATT-G ***
28711545-G-GGTGT 26565398-G-GGTGT 21×GT***
22421679-CCAGTCC-GCAGACA 20259793-CCAGTCC-GCAGACA DYZ19 ***
24388087-T-TAG 22241940-T-TAG ***
22470017-TCC-GCA 20308131-TCC-GCA DYZ19 ***
22480990-GTG-ATT 20319104-GTG-ATT DYZ19 ***
22762820-G-GAA 20600934-G-GAA 12×A***
22936288-C-CTTT 20774402-C-CTTT 25×T***
23076305-GCG-ACA 20914419-GCG-ACA ***
23170779-GT-G 21008893-GT-G ***
24388084-ATATATATCTCC-A 22241937-ATATATATCTCC-A ***
24595356-CT-C 22449209-CT-C P3_t2 26×T***
28545880-CA-C 26399733-CA-C 20×A***
25505124-CTTTTTTTTTTTTTTTTTTTTTTT-C 23358977-CTTTTTTTTTTTTTTTTTTTTTTT-C P1_gr1 39×T***
25505141-TTTTTTTTTTTTTTTTTTTTTTTG-T 23358994-TTTTTTTTTTTTTTTTTTTTTTTG-T P1_gr1 ***
25592898-CTC-ATA 23446751-CTC-ATA P1_gr1 ***
26310632-C-CTTT 24164485-C-CTTT P1_Y1 28×T***
26462568-TGCCTG-CGCCCA 24316421-TGCCTG-CGCCCA P1_Y1 ***
28149420-C-CT 26003273-C-CT P1_b4 10×T***
28253524-C-CAAAA 26107377-C-CAAAA P1_b4 ***
19098471-AC-A 16986591-AC-A ***
17012786-C-CATATAT 14900906-C-CATATAT 12×AT***
58907506-G-C 56683365-C-G ***
59027472-T-TAAA 56881325-T-TAAA 11×A***
59005870-A-G 56859723-A-G ***
59002815-ACG-GCT 56856668-ACG-GCT ***
22365946-C-T 20204060-C-T DYZ19 ***
13469706-CG-AC 11314030-CG-AC ***
58844026-AT-A 56746841-GA-G ***
21965774-CA-C 19803888-CA-C 19×A***
13869816-GTGGAA-G 11749110-GTGGAA-G 10×TGGAA***
58915830-C-A 56675041-G-T ***
58844025-CA-C 56746844-AT-A ***
22297836-TT-GA 20135950-TT-GA DYZ19 ***
13470378-ACG-CCC 11314702-ACG-CCC ***
8901046-T-TAC 9033005-T-TAC 15×AC***
20835459-GC-G 18673573-GC-G P4_Gap 9×C***
22281896-TC-GT 20120010-TC-GT DYZ19 ***
4517054-G-GA 4649013-G-GA 15×A***
58917658-N-G 56673213-N-C ***
58913158-T-C 56677713-A-G ***
4820842-TATGTGTG-GATCTTC 4952801-TATGTGTG-GATCTTC ***
58909261-A-T 56681610-T-A ***
58907594-T-A 56683277-A-T ***
58909147-C-T 56681724-G-A ***
58909150-G-C 56681721-C-G ***
58909152-A-T 56681719-T-A ***
58909214-G-C 56681657-C-G ***
58909220-G-C 56681651-C-G ***
58909254-C-A 56681617-G-T ***
58909263-G-T 56681608-C-A ***
58913069-C-A 56677802-G-T ***
58912934-C-T 56677937-G-A ***
58913042-C-T 56677829-G-A ***
58913045-G-T 56677826-C-A ***
58913049-T-A 56677822-A-T ***
58913056-T-G 56677815-A-C ***
58913060-G-T 56677811-C-A ***
58913064-T-A 56677807-A-T ***
2888600-TG-CC 3020559-TG-CC ***
5010116-A-ACAAC 5142075-A-ACAAC ***
16205796-CTTTTTTT-C 14093916-CTTTTTTT-C 21×T***
13476662-AAACC-GAACG 11320986-AAACC-GAACG ***
13463838-TTT-GGC 11308162-TTT-GGC ***
13467498-T-TC 11311822-T-TC ***
13467509-GAAG-TACT 11311833-GAAG-TACT ***
13468991-CCCCTTGT-TGCCCTGG 11313315-CCCCTTGT-TGCCCTGG ***
13469368-TG-GT 11313692-TG-GT ***
13470696-CTGCA-TTGCG 11315020-CTGCA-TTGCG ***
13483584-AC-A 11327908-AC-A ***
13393449-AT-A 11237773-AT-A 12×T***
13484454-GTCATAATGC-TTCACAATA 11328778-GTCATAATGC-TTCACAATA ***
13484485-GAAGAGTTT-CAAGTTTTA 11328809-GAAGAGTTT-CAAGTTTTA ***
13488985-GCCAGGGT-CCCGGGGC 11333309-GCCAGGGT-CCCGGGGC ***
13562043-TAA-T 11406367-TAA-T ***
13585053-CA-C 11429377-CA-C 19×A***
13842541-GA-TG 11721835-GA-TG ***
14232811-CTCTT-C 12112105-CTCTT-C ***
13414797-A-ATCTTT 11259121-A-ATCTTT 20×T***
13267597-C-CAAAAAAAAAAA 11111921-C-CAAAAAAAAAAA 11×A***
5434020-GT-G 5565979-GT-G 13×T***
8398840-CAAAAAAA-C 8530799-CAAAAAAA-C 17×A***
5786608-C-CAAAAA 5918567-C-CAAAAA 20×A***
6043970-CT-C 6175929-CT-C 22×T***
7149622-CTT-C 7281581-CTT-C 19×T***
7179734-G-GT 7311693-G-GT 25×T***
7200820-AT-A 7332779-AT-A 15×T***
7483015-CTATTG-TTTTTT 7614974-CTATTG-TTTTTT IR1_L ***
7534390-T-TG 7666349-T-TG ***
9302420-GAGTGGGTGGAC-G 9464811-GAGTGGGTGGAC-G ***
13140046-TG-T 10629532-TG-T ***
9302434-GGCCAAGACGGCCT-G 9464825-GGCCAAGACGGCCT-G ***
9940906-CTG-TTA 10103297-CTG-TTA ***
9954233-CTCG-ATAT 10116624-CTCG-ATAT ***
10030838-GTG-CTA 10193229-GTG-CTA ***
13129498-GTGCT-CTGCC 10618984-GTGCT-CTGCC ***
13138689-TG-T 10628175-TG-T ***
13140042-CG-C 10629528-CG-C ***
22366968-C-A 20205082-C-A DYZ19 ***
22337733-G-T 20175847-G-T DYZ19 ***
22365692-A-C 20203806-A-C DYZ19 ***
7395139-G-T 7527098-G-T A16889 ***
6215449-T-A 6347408-T-A IR3_Dst ***
6215455-T-A 6347414-T-A IR3_Dst ***
6233707-C-T 6365666-C-T IR3_Dst ***
6388514-A-G 6520473-A-G ***
7007867-C-T 7139826-C-T ***
7388765-T-A 7520724-T-A ***
7483017-A-T 7614976-A-T IR1_L ***
6133923-C-T 6265882-C-T ***
7483020-G-T 7614979-G-T IR1_L ***
9302416-T-C 9464807-T-C ***
9321968-C-T 9484359-C-T ***
9383214-A-G 9545605-A-G ***
9781855-T-C 9944246-T-C ***
9782900-C-G 9945291-C-G ***
9930192-T-G 10092583-T-G ***
6215448-T-A 6347407-T-A IR3_Dst ***
6045676-A-T 6177635-A-T ***
13122014-G-C 10611500-G-C ***
3144172-A-G 3276131-A-G ***
13479693-G-C 11324017-G-C ***
13467492-C-T 11311816-C-T ***
13385207-T-C 11229531-T-C ***
22309502-A-T 20147616-A-T DYZ19 ***
2688620-A-T 2820579-A-T ***
2688622-A-T 2820581-A-T 29×T***
3594868-T-C 3726827-T-C ***
5548046-G-A 5680005-G-A ***
4096188-G-T 4228147-G-T ***
4289558-A-T 4421517-A-T ***
4621891-A-G 4753850-A-G ***
4782689-C-T 4914648-C-T ***
4820857-G-A 4952816-G-A ***
5394571-G-A 5526530-G-A ***
5521293-A-G 5653252-A-G ***
10030837-T-C 10193228-T-C ***
13122020-T-A 10611506-T-A ***
13328927-A-C 11173251-A-C ***
13518312-C-T 11362636-C-T ***
13474767-C-A 11319091-C-A ***
13479530-G-A 11323854-G-A ***
13483624-T-A 11327948-T-A ***
13483645-T-A 11327969-T-A ***
13484544-G-C 11328868-G-C ***
13487551-C-A 11331875-C-A ***
13721616-C-A 11565940-C-A 4×ATGGA***
13465473-A-C 11309797-A-C ***
13721624-G-T 11565948-G-T ***
13721630-G-A 11565954-G-A ***
13724941-G-A 11569265-G-A ***
13728287-T-A 11572611-T-A ***
13728302-C-A 11572626-C-A ***
13728312-T-A 11572636-T-A ***
13740793-G-C 11585117-G-C ***
13471146-A-T 11315470-A-T ***
13465453-A-G 11309777-A-G ***
13122027-A-T 10611513-A-T ***
13125453-C-G 10614939-C-G ***
13122033-G-C 10611519-G-C ***
13122037-A-T 10611523-A-T ***
13122038-A-T 10611524-A-T ***
13122041-A-C 10611527-A-C ***
13122047-T-A 10611533-T-A ***
13122069-T-A 10611555-T-A ***
13125455-C-A 10614941-C-A ***
13465451-G-T 11309775-G-T ***
13129498-G-C 10618984-G-C ***
13203958-C-A 11048282-C-A ***
13222867-G-A 11067191-G-A ***
13314526-C-G 11158850-C-G ***
13379546-C-T 11223870-C-T ***
13379551-T-A 11223875-T-A ***
13393324-G-T 11237648-G-T ***
13465780-A-C 11310104-A-C ***
22355024-G-T 20193138-G-T DYZ19 ***
14258440-C-T 12137734-C-T S613 ***
27151331-A-T 25005184-A-T P1_g3 ***
22335714-A-C 20173828-A-C DYZ19 ***
22360717-C-A 20198831-C-A DYZ19 ***
22365657-A-T 20203771-A-T DYZ19 ***
22495777-A-G 20333891-A-G DYZ19 ***
22495793-C-A 20333907-C-A DYZ19 ***
26153962-G-A 24007815-G-A P1_Y1 15×A***
22319023-GTA-G 20157137-GTA-G DYZ19 ***
13393318-A-G 11237642-A-G ***
3558246-TA-T 3690205-TA-T 16×A***
13480159-GTC-CTG 11324483-GTC-CTG ***
22268318-TTT-GTG 20106432-TTT-GTG DYZ19 ***
22335732-TAG-GTT 20173846-TAG-GTT DYZ19 ***
13411421-A-G 11255745-A-G ***
22250221-T-A 20088335-T-A DYZ19 ***
13306703-G-T 11151027-G-T ***
13716290-C-T 11560614-C-T ***
13250749-G-A 11095073-G-A ***
58995130-T-C 56848983-T-C ***
13278875-A-T 11123199-A-T ***
13479698-A-C 11324022-A-C ***
8426377-G-GCTTCTT,T 8558336-G-GCTTCTT,T 22×CTT***
26463097-C-CTTTT 24316950-C-CTTTT P1_Y1 36×T***
13465822-A-C 11310146-A-C ***
22352967-G-T 20191081-G-T DYZ19 ***
22298200-C-T 20136314-C-T DYZ19 ***
13470722-A-G 11315046-A-G ***
22421978-T-C 20260092-T-C DYZ19 ***
22357236-T-C 20195350-T-C DYZ19 ***
22357237-A-T 20195351-A-T DYZ19 ***
13470254-C-T 11314578-C-T ***
13469897-GA-CC 11314221-GA-CC ***
15566817-GA-G 13454937-GA-G 22×A***
28802831-ATTGAG-GTGGAC 26656684-ATTGAG-GTGGAC ***
10029513-A-G 10191904-A-G ***
14166071-T-G 12045365-T-G ***
2745870-G-A 2877829-G-A ***
13327754-T-G 11172078-T-G ***
25289976-A-C 23143829-A-C P2_r1 ***
22309360-T-G 20147474-T-G DYZ19 ***
22337597-A-T 20175711-A-T DYZ19 ***
13469234-T-G 11313558-T-G ***
13411291-G-T 11255615-G-T ***
22311335-T-A 20149449-T-A DYZ19 ***
22469994-G-A 20308108-G-A DYZ19 ***
22309239-C-T 20147353-C-T DYZ19 ***
22354575-A-T 20192689-A-T DYZ19 ***
22311334-G-C 20149448-G-C DYZ19 ***
22268383-T-A 20106497-T-A DYZ19 ***
13431439-T-C 11275763-T-C ***
22337532-A-G 20175646-A-G DYZ19 ***
22421248-C-A 20259362-C-A DYZ19 ***
28802753-T-G 26656606-T-G ***
13467489-A-C 11311813-A-C ***
58870795-C-G 56720076-G-C ***
13484759-A-T 11329083-A-T ***
13465747-T-C 11310071-T-C ***
13467511-A-C 11311835-A-C ***
22263789-G-T 20101903-G-T DYZ19 ***
22263780-G-A 20101894-G-A DYZ19 ***
22263779-G-T 20101893-G-T DYZ19 ***
9722478-T-C 9884869-T-C IR3_Prx ***
22263781-T-C 20101895-T-C DYZ19 ***
7415667-C-T 7547626-C-T S10253 ***
13481949-T-G 11326273-T-G ***
13467849-G-A 11312173-G-A ***
9932136-A-T 10094527-A-T A13698 ***
13389554-G-A 11233878-G-A ***
59011613-C-A 56865466-C-A ***
17196590-G-A 15084710-G-A ***
24566548-G-A 22420401-G-A P3_t2 ***
13484790-A-T 11329114-A-T ***
22297837-T-A 20135951-T-A DYZ19 ***
13460728-C-A 11305052-C-A ***
13740850-C-T 11585174-C-T ***
14520173-C-T 12408374-C-T ***
22365633-G-A 20203747-G-A DYZ19 ***
22309206-G-A 20147320-G-A DYZ19 ***
22292149-C-G 20130263-C-G DYZ19 ***
22292152-G-T 20130266-G-T DYZ19 ***
22292233-T-A 20130347-T-A DYZ19 ***
22297347-C-T 20135461-C-T DYZ19 ***
22298146-A-T 20136260-A-T DYZ19 ***
22309191-A-T 20147305-A-T DYZ19 ***
22309223-T-A 20147337-T-A DYZ19 ***
22292044-A-C 20130158-A-C DYZ19 ***
22309233-T-A 20147347-T-A DYZ19 ***
22309493-T-C 20147607-T-C DYZ19 ***
22311292-T-A 20149406-T-A DYZ19 ***
22328420-A-T 20166534-A-T DYZ19 ***
22328422-A-C 20166536-A-C DYZ19 ***
22335441-A-G 20173555-A-G DYZ19 ***
22335442-G-T 20173556-G-T DYZ19 ***
22292107-G-A 20130221-G-A DYZ19 ***
22292035-T-A 20130149-T-A DYZ19 ***
22337435-G-A 20175549-G-A DYZ19 ***
22235842-T-G 20073956-T-G DYZ19 ***
20668558-C-T 18506672-C-T P4_Prx ***
20869025-T-G 18707139-T-G P4_Dst ***
21575289-C-T 19413403-C-T ***
21830066-C-T 19668180-C-T ***
22226522-T-A 20064636-T-A DYZ19 ***
22232040-C-A 20070154-C-A BY10784 DYZ19 ***
22236408-A-T 20074522-A-T DYZ19 ***
22291808-G-T 20129922-G-T DYZ19 ***
22236443-C-G 20074557-C-G DYZ19 ***
22236679-C-A 20074793-C-A DYZ19 ***
22252974-A-T 20091088-A-T DYZ19 ***
22256668-C-T 20094782-C-T DYZ19 ***
22256679-A-G 20094793-A-G ZS2980 DYZ19 ***
22268224-G-T 20106338-G-T DYZ19 ***
22268231-G-C 20106345-G-C DYZ19 ***
22335693-T-G 20173807-T-G DYZ19 ***
22337619-C-T 20175733-C-T DYZ19 ***
20668555-T-A 18506669-T-A P4_Prx ***
22361131-A-C 20199245-A-C DYZ19 ***
22359867-T-G 20197981-T-G DYZ19 ***
22360405-C-T 20198519-C-T DYZ19 ***
22360419-G-A 20198533-G-A DYZ19 ***
22360553-A-T 20198667-A-T DYZ19 ***
22360696-T-A 20198810-T-A DYZ19 ***
22361053-A-G 20199167-A-G DYZ19 ***
22361156-G-C 20199270-G-C DYZ19 ***
22359846-G-T 20197960-G-T DYZ19 ***
22361342-A-C 20199456-A-C DYZ19 ***
22361407-A-T 20199521-A-T DYZ19 ***
22362744-G-T 20200858-G-T DYZ19 ***
22364722-G-C 20202836-G-C DYZ19 ***
22364745-T-G 20202859-T-G DYZ19 ***
22365597-T-G 20203711-T-G DYZ19 ***
22365612-C-G 20203726-C-G DYZ19 ***
22359847-A-T 20197961-A-T DYZ19 ***
22357635-G-T 20195749-G-T DYZ19 ***
22337704-C-A 20175818-C-A DYZ19 ***
22352905-G-T 20191019-G-T DYZ19 ***
22337728-C-T 20175842-C-T DYZ19 ***
13470314-A-C 11314638-A-C ***
22337744-T-C 20175858-T-C DYZ19 ***
22341640-A-T 20179754-A-T DYZ19 ***
22343057-A-T 20181171-A-T DYZ19 ***
22343133-G-T 20181247-G-T DYZ19 ***
22354660-T-C 20192774-T-C DYZ19 ***
22357354-A-G 20195468-A-G DYZ19 ***
22354688-T-G 20192802-T-G DYZ19 ***
22354953-A-C 20193067-A-C DYZ19 ***
22355016-G-T 20193130-G-T DYZ19 ***
22355017-G-T 20193131-G-T DYZ19 ***
22355023-T-C 20193137-T-C DYZ19 ***
22357271-T-A 20195385-T-A DYZ19 ***
22357349-G-A 20195463-G-A DYZ19 ***
20668556-G-A 18506670-G-A P4_Prx ***
20668146-C-A 18506260-C-A P4_Prx ***
14653860-A-G 12541925-A-G ***
19728529-G-A 17616649-G-A P5_Prx ***
19632830-C-T 17520950-C-T P5_Prx ***
19699765-A-G 17587885-A-G P5_Prx ***
19728485-G-A 17616605-G-A P5_Prx ***
19728521-C-T 17616641-C-T P5_Prx ***
19728523-A-T 17616643-A-T P5_Prx ***
19728527-C-G 17616647-C-G P5_Prx ***
19728531-C-T 17616651-C-T P5_Prx ***
19562222-T-A 17450342-T-A ***
19728775-C-A 17616895-C-A P5_Prx ***
19732861-G-A 17620981-G-A P5_Prx ***
19732886-G-A 17621006-G-A P5_Prx ***
19732898-T-C 17621018-T-C P5_Prx ***
19732901-G-A 17621021-G-A P5_Prx ***
19732904-G-A 17621024-G-A P5_Prx ***
19732930-T-C 17621050-T-C P5_Prx ***
19632723-A-G 17520843-A-G P5_Prx ***
19487975-T-C 17376095-T-C ***
19732956-T-C 17621076-T-C P5_Prx ***
16785262-A-T 14673382-A-T ***
14990640-A-G 12878725-A-G ***
16147270-G-A 14035390-G-A P8_Dst ***
16147279-A-T 14035399-A-T P8_Dst ***
16147288-G-A 14035408-G-A P8_Dst ***
16292615-C-T 14180735-C-T ***
16398957-G-T 14287077-G-T ***
17035988-G-A 14924108-G-A ***
18370404-G-T 16258524-G-T P6_Prx ***
18301777-C-T 16189897-C-T P6_Prx ***
18328042-A-T 16216162-A-T P6_Prx ***
18328045-A-T 16216165-A-T P6_Prx ***
18353304-T-A 16241424-T-A P6_Prx ***
18370340-G-T 16258460-G-T P6_Prx ***
18370382-A-T 16258502-A-T P6_Prx ***
18370383-G-T 16258503-G-T P6_Prx ***
19732937-C-T 17621057-C-T P5_Prx ***
19732975-G-T 17621095-G-T P5_Prx ***
20541009-T-G 18379123-T-G P5_Dst ***
20540899-T-C 18379013-T-C P5_Dst ***
20540873-T-A 18378987-T-A P5_Dst ***
20540879-C-T 18378993-C-T P5_Dst ***
20540883-A-G 18378997-A-G P5_Dst ***
20540889-A-T 18379003-A-T P5_Dst ***
20540897-A-G 18379011-A-G P5_Dst ***
20540898-T-C 18379012-T-C P5_Dst ***
20540905-G-A 18379019-G-A P5_Dst ***
20540857-G-A 18378971-G-A P5_Dst ***
20540908-G-A 18379022-G-A P5_Dst ***
20540937-C-T 18379051-C-T P5_Dst ***
20540945-T-C 18379059-T-C P5_Dst ***
20540960-G-A 18379074-G-A P5_Dst ***
20540961-G-A 18379075-G-A P5_Dst ***
20540995-T-G 18379109-T-G P5_Dst ***
20541008-C-T 18379122-C-T P5_Dst ***
20540870-G-A 18378984-G-A P5_Dst ***
20473581-G-A 18311695-G-A P5_Dst ***
19732981-C-T 17621101-C-T P5_Prx ***
20114408-T-C 18002528-T-C P5_Dst ***
19735698-A-G 17623818-A-G P5_Prx ***
19735707-G-A 17623827-G-A P5_Prx ***
19735718-C-T 17623838-C-T P5_Prx ***
19735721-G-A 17623841-G-A P5_Prx ***
19832195-G-A 17720315-G-A P5_Prx ***
19848348-G-T 17736468-G-T P5_Prx ***
20015359-A-G 17903479-A-G P5_Prx ***
20203561-A-T 18041675-A-T P5_Dst ***
20473560-C-A 18311674-C-A P5_Dst ***
20203565-C-T 18041679-C-T P5_Dst ***
20203573-C-T 18041687-C-T P5_Dst ***
20424847-A-G 18262961-A-G P5_Dst ***
20424851-A-G 18262965-A-G P5_Dst ***
20462988-G-A 18301102-G-A P5_Dst ***
20462996-T-G 18301110-T-G P5_Dst ***
20463008-A-T 18301122-A-T P5_Dst ***
22421538-G-A,C 20259652-G-A,C DYZ19 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Mutation Notes:

Kit POSITION-REF-ALT (hg19) POSITION-REF-ALT (hg38) Note
Manual22304315-A-G20142429-A-G507A 238G and about 80 other reads.
Manual25198342-T-G23052195-T-G16G 21T

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: DQWHW*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs2823
Variant counts last updated 2018-05-15 22:20:25.

* BED data not available. Using default values.


Big Tree Main Page