Williamson
FB38: P9UH4-A, FGC: P9UH4, ySearch: SJU8D, FTDNA: 196041, YFull-FGC: YF01416, YSEQ: 65MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FB38 P9UH4-A | FGC P9UH4 | Manual Edits |
---|---|---|---|---|---|---|---|---|---|---|
23761672-A-C | 21599786-A-C | YP1209 | Y | + | ** | |||||
8790228-A-G | 8922187-A-G | FGC3199 | Y | Y | + | * | ||||
32872-G-T | + | |||||||||
13413-TAC-GGT | + | |||||||||
14750-GTGGGG-TTTCAT | + | |||||||||
15612-AA-TC | + | |||||||||
21805280-NN-TC | + | |||||||||
11653101-NN-GA | + | |||||||||
14873-AGT-TAG | + | |||||||||
14882-GT-G | + | |||||||||
10936948-A-T | + | |||||||||
11675277-AAAC-GAAT | + | |||||||||
22237313-C-CT | 20075427-C-CT | DYZ19 | + | |||||||
34920-G-A | + | |||||||||
36634-AAAAA-TAAAG | + | |||||||||
56877857-AAAAAAAAAAAAAAAAGGAG-CAAAAAAAAAGGGA | + | |||||||||
18439427-TA-T | 16327547-TA-T | P6_Dst | + | |||||||
21464556-GAAAAG-AAAAAA | 19302670-GAAAAG-AAAAAA | + | ||||||||
27614542-C-T | 25468395-C-T | P1_Y2 | 18×T | + | ||||||
28534936-GTTTC-TTTTT | 26388789-GTTTC-TTTTT | + | ||||||||
22314659-C-T | 20152773-C-T | DYZ19 | * | |||||||
22432968-A-G | 20271082-A-G | DYZ19 | * | |||||||
22481783-A-T | 20319897-A-T | DYZ19 | * | |||||||
13700609-T-C,G | 11544933-T-C,G | * | ||||||||
22423737-G-A | 20261851-G-A | DYZ19 | * | |||||||
22504988-T-G | 20343102-T-G | DYZ19 | * | |||||||
22360051-C-G | 20198165-C-G | DYZ19 | * | |||||||
13468192-CTTAT-GTTAC | 11312516-CTTAT-GTTAC | * | ||||||||
13691232-CGC-GGG | 11535556-CGC-GGG | * | ||||||||
13709578-CA-TT | 11553902-CA-TT | * | ||||||||
28805345-CA-AT | 26659198-CA-AT | * | ||||||||
28812475-ATC-GTA | 26666328-ATC-GTA | * | ||||||||
58979661-TTTAC-ATTAT | 56833514-TTTAC-ATTAT | * | ||||||||
58979862-TG-CT | 56833715-TG-CT | * | ||||||||
22503841-T-G | 20341955-T-G | DYZ19 | * | |||||||
22503789-T-C | 20341903-T-C | DYZ19 | * | |||||||
13468273-CCAT-TCGC | 11312597-CCAT-TCGC | * | ||||||||
22324619-G-T | 20162733-G-T | DYZ19 | * | |||||||
13347932-T-C | 11192256-T-C | 21×AC | * | |||||||
27794677-C-CAT | 25648530-C-CAT | P1_Y2 | 12×AT | * | ||||||
22320494-C-A | 20158608-C-A | DYZ19 | * | |||||||
22320849-T-G | 20158963-T-G | DYZ19 | * | |||||||
22323036-A-C | 20161150-A-C | DYZ19 | * | |||||||
22481770-C-T | 20319884-C-T | DYZ19 | * | |||||||
22493637-T-C | 20331751-T-C | DYZ19 | * | |||||||
22501241-G-T | 20339355-G-T | DYZ19 | * | |||||||
13723167-GG-TT | 11567491-GG-TT | * | ||||||||
28812733-TTA-GTG | 26666586-TTA-GTG | * | ||||||||
13451745-AC-GT | 11296069-AC-GT | * | ||||||||
13717777-GTCA-CTCG | 11562101-GTCA-CTCG | * | ||||||||
13244874-A-G | 11089198-A-G | * | ||||||||
13569797-T-A | 11414121-T-A | * | ||||||||
59013026-A-T | 56866879-A-T | * | ||||||||
13690848-CAA-GAT | 11535172-CAA-GAT | * | ||||||||
58974437-ATTC-GTTT | 56828290-ATTC-GTTT | * | ||||||||
58977739-ATTG-TTTA | 56831592-ATTG-TTTA | * | ||||||||
28814590-TC-GA | 26668443-TC-GA | * | ||||||||
22455451-G-T | 20293565-G-T | DYZ19 | * | |||||||
28224059-A-G | 26077912-A-G | P1_b4 | * | |||||||
22321064-T-G | 20159178-T-G | DYZ19 | * | |||||||
22355517-G-C | 20193631-G-C | DYZ19 | * | |||||||
22503805-G-A | 20341919-G-A | DYZ19 | * | |||||||
9936297-CACG-GACA | 10098688-CACG-GACA | * | ||||||||
27483079-T-C | 25336932-T-C | P1_Y2 | * | |||||||
13204025-ATAATGG-CTGATGA | 11048349-ATAATGG-CTGATGA | * | ||||||||
13514189-ATG-GTT | 11358513-ATG-GTT | * | ||||||||
13268061-AG-CA | 11112385-AG-CA | * | ||||||||
22324469-A-C | 20162583-A-C | DYZ19 | * | |||||||
27483042-G-A | 25336895-G-A | P1_Y2 | * | |||||||
59031513-CC-GG | 56885366-CC-GG | * | ||||||||
59012419-AT-CA | 56866272-AT-CA | * | ||||||||
22495101-T-G | 20333215-T-G | DYZ19 | * | |||||||
22351368-T-A | 20189482-T-A | DYZ19 | * | |||||||
22351379-G-A | 20189493-G-A | DYZ19 | * | |||||||
58854637-CGATG-GCATT | 56736230-CATCG-AATGC | * | ||||||||
22343282-G-C | 20181396-G-C | DYZ19 | * | |||||||
58867066-A-T | 56723805-T-A | * | ||||||||
27483421-A-G | 25337274-A-G | P1_Y2 | * | |||||||
22481867-G-T | 20319981-G-T | DYZ19 | * | |||||||
22503441-C-G | 20341555-C-G | DYZ19 | * | |||||||
20473133-G-A | 18311247-G-A | BY154935 | P5_Dst | * | ||||||
13707161-GGT-TGC | 11551485-GGT-TGC | * | ||||||||
28795663-CATC-GATA | 26649516-CATC-GATA | * | ||||||||
13688965-TGAAG-GGAAA | 11533289-TGAAG-GGAAA | * | ||||||||
22481833-G-C | 20319947-G-C | DYZ19 | * | |||||||
22505044-G-T | 20343158-G-T | DYZ19 | * | |||||||
13498002-TG-AA | 11342326-TG-AA | * | ||||||||
13565113-GTAT-ATAC | 11409437-GTAT-ATAC | * | ||||||||
13448576-CTCTAT-TTCCAC | 11292900-CTCTAT-TTCCAC | * | ||||||||
13450930-CC-AT | 11295254-CC-AT | * | ||||||||
9952613-CACAT-TACAC | 10115004-CACAT-TACAC | * | ||||||||
22502503-AG-TA | 20340617-AG-TA | DYZ19 | * | |||||||
20751042-G-A | 18589156-G-A | P4_Prx | 13×A | * | ||||||
28802622-CGGA-TGGC | 26656475-CGGA-TGGC | * | ||||||||
13449764-TATTCCATTCT-CATTGCATTCC | 11294088-TATTCCATTCT-CATTGCATTCC | * | ||||||||
22490333-A-G | 20328447-A-G | DYZ19 | * | |||||||
22481826-G-C | 20319940-G-C | DYZ19 | * | |||||||
28810533-GGCA-AGGG | 26664386-GGCA-AGGG | * | ||||||||
28806847-TAG-GAT | 26660700-TAG-GAT | * | ||||||||
28806891-GG-TT | 26660744-GG-TT | * | ||||||||
58983538-T-C | 56837391-T-C | * | ||||||||
58983577-A-G | 56837430-A-G | * | ||||||||
22493308-A-T | 20331422-A-T | DYZ19 | * | |||||||
22297923-TCAC-ACAG | 20136037-TCAC-ACAG | DYZ19 | * | |||||||
59012364-AAAT-TAAG | 56866217-AAAT-TAAG | * | ||||||||
19731-A-T | * | |||||||||
22238323-TAAA-AAAC | 20076437-TAAA-AAAC | DYZ19 | * | |||||||
11003571-C-T | * | |||||||||
56837376-A-C | * | |||||||||
19816-TA-AC | * | |||||||||
20551642-A-C | 18389756-A-C | P5_Dst | * | |||||||
19628136-T-G | 17516256-T-G | P5_Prx | * | |||||||
22492650-A-C | 20330764-A-C | DYZ19 | * | |||||||
22492755-G-C | 20330869-G-C | DYZ19 | * | |||||||
22496697-A-G | 20334811-A-G | DYZ19 | * | |||||||
22493388-A-G | 20331502-A-G | DYZ19 | * | |||||||
22501089-A-T | 20339203-A-T | DYZ19 | * | |||||||
22501509-C-G | 20339623-C-G | DYZ19 | * | |||||||
22501549-A-C | 20339663-A-C | DYZ19 | * | |||||||
22501556-G-A | 20339670-G-A | DYZ19 | * | |||||||
22501658-T-G | 20339772-T-G | DYZ19 | * | |||||||
10047855-ACACC-CCACA | 10210246-ACACC-CCACA | * | ||||||||
13694270-ATGAC-GTGAA | 11538594-ATGAC-GTGAA | * | ||||||||
9965245-GAACTAT-AAACAA | 10127636-GAACTAT-AAACAA | * | ||||||||
28583599-GTG-CTA | 26437452-GTG-CTA | * | ||||||||
13694670-AGGA-CGGC | 11538994-AGGA-CGGC | * | ||||||||
20738728-G-T | 18576842-G-T | P4_Prx | * | * | ||||||
20905447-C-A | 18743561-C-A | P4_Dst | * | * | ||||||
20121812-T-C | 18009932-T-C | ZZ85_2 | P5_Dst | * | ||||||
22453768-C-T | 20291882-C-T | DYZ19 | * | |||||||
22453776-G-A | 20291890-G-A | DYZ19 | * | |||||||
22453797-G-A | 20291911-G-A | DYZ19 | * | |||||||
22496853-A-G | 20334967-A-G | DYZ19 | * | |||||||
28809934-AGAAT-GGAAG | 26663787-AGAAT-GGAAG | * | ||||||||
28811012-TCGG-ACGC | 26664865-TCGG-ACGC | * | ||||||||
11003609-G-C | * | |||||||||
22501170-T-C | 20339284-T-C | DYZ19 | * | |||||||
22501251-G-T | 20339365-G-T | DYZ19 | * | |||||||
22501518-G-T | 20339632-G-T | DYZ19 | * | |||||||
22501525-T-A | 20339639-T-A | DYZ19 | * | |||||||
22501568-T-A | 20339682-T-A | DYZ19 | * | |||||||
22493523-A-C | 20331637-A-C | DYZ19 | * | |||||||
24057217-C-T | 21911070-C-T | P3_b1 | * | |||||||
28810437-GGT-AGGG | 26664290-GGT-AGGG | * | ||||||||
22355982-T-C | 20194096-T-C | DYZ19 | * | |||||||
22496895-C-T | 20335009-C-T | DYZ19 | * | |||||||
22492211-C-T | 20330325-C-T | DYZ19 | * | |||||||
22492219-G-A | 20330333-G-A | DYZ19 | * | |||||||
22492240-G-A | 20330354-G-A | DYZ19 | * | |||||||
11003579-TC-T | * | |||||||||
25784078-A-C | 23637931-A-C | P1_b3 | * | |||||||
23703760-G-A | 21541874-G-A | * | ||||||||
28257621-T-A | 26111474-T-A | P1_b4 | * | |||||||
26476558-C-T | 24330411-C-T | P1_Y1 | * | |||||||
10972838-C-A | * | |||||||||
9936449-TG-CA | 10098840-TG-CA | * | ||||||||
9952497-AG-GA,GG | 10114888-AG-GA,GG | * | ||||||||
9961197-ATT-GTG | 10123588-ATT-GTG | * | ||||||||
10061852-TAC-CAT | 10224243-TAC-CAT | * | ||||||||
10061899-ACAG-GCAT | 10224290-ACAG-GCAT | * | ||||||||
10683305-CA-AT,CT | * | |||||||||
10789463-GC-AG,GG | * | |||||||||
10900008-CTCCA-ATCCC | * | |||||||||
10986745-GAA-AAC,GAC | * | |||||||||
13262027-C-A | 11106351-C-A | * | ||||||||
13263468-GGT-ACA,GCA | 11107792-GGT-ACA,GCA | * | ||||||||
13263676-TGCG-AGCT,TGTG | 11108000-TGCG-AGCT,TGTG | * | ||||||||
13267843-CC-AC,AT | 11112167-CC-AC,AT | * | ||||||||
13267850-GCTCA-CCTCA,CCTCT | 11112174-GCTCA-CCTCA,CCTCT | * | ||||||||
13271055-G-AAA | 11115379-G-AAA | * | ||||||||
13272738-TT-CC,CT | 11117062-TT-CC,CT | * | ||||||||
13446484-TG-CA,CG | 11290808-TG-CA,CG | * | ||||||||
13448317-CTCCAT-TTCCAC | 11292641-CTCCAT-TTCCAC | * | ||||||||
13448563-GAAATC-G,GCAATC | 11292887-GAAATC-G,GCAATC | * | ||||||||
13449059-GTTCCACTG-ATTC,ATTCCACTG | 11293383-GTTCCACTG-ATTC,ATTCCACTG | * | ||||||||
13449326-TTT-ATT,CTA | 11293650-TTT-ATT,CTA | * | ||||||||
13450503-ACACTCCACTCCACTCCACTTCACTCCAC-ACACTCCACTCCACTCCAC,CCACTCCACTCCACTCCAATCCATCCCAT | 11294827-ACACTCCACTCCACTCCACTTCACTCCAC-ACACTCCACTCCACTCCAC,CCACTCCACTCCACTCCAATCCATCCCAT | * | ||||||||
13450996-CAT-CAC,TAC | 11295320-CAT-CAC,TAC | * | ||||||||
13451074-CTAT-GGAA,GGAT | 11295398-CTAT-GGAA,GGAT | * | ||||||||
13452125-TTCCACTG-CTCCACTG,CTCTACTC | 11296449-TTCCACTG-CTCCACTG,CTCTACTC | * | ||||||||
13452227-CCACTC-C,G | 11296551-CCACTC-C,G | * | ||||||||
13468234-ATG-TTC | 11312558-ATG-TTC | * | ||||||||
13564080-TG-CC | 11408404-TG-CC | * | ||||||||
13564093-TGAAA-CGAAG | 11408417-TGAAA-CGAAG | * | ||||||||
13688232-GAATGC-GAATGG,TAATGG | 11532556-GAATGC-GAATGG,TAATGG | * | ||||||||
13689738-CTC-ATG,ATGGACTC | 11534062-CTC-ATG,ATGGACTC | * | ||||||||
13689934-CGGAG-CGGAA,TGGAA | 11534258-CGGAG-CGGAA,TGGAA | * | ||||||||
13690439-TAA-CAG | 11534763-TAA-CAG | * | ||||||||
13691626-CAAAATA-TAGAATT | 11535950-CAAAATA-TAGAATT | * | ||||||||
13691798-T-AATGGA,TATGGA | 11536122-T-AATGGA,TATGGA | * | ||||||||
13692824-GGAAC-AGAAT | 11537148-GGAAC-AGAAT | * | ||||||||
13693201-AGTCA-AGTCG,CGTCG | 11537525-AGTCA-AGTCG,CGTCG | * | ||||||||
13694812-AATGGG-GATTGC,GATTGG | 11539136-AATGGG-GATTGC,GATTGG | * | ||||||||
13696759-CGAAC-CGAAT,GGAAC | 11541083-CGAAC-CGAAT,GGAAC | * | ||||||||
13705116-GG-TT | 11549440-GG-TT | * | ||||||||
13706085-TATGGCG-AATGGCA | 11550409-TATGGCG-AATGGCA | * | ||||||||
13709156-CACTGGAATGGAA-GAT | 11553480-CACTGGAATGGAA-GAT | * | ||||||||
13712659-GAATA-AAATG,GAATG | 11556983-GAATA-AAATG,GAATG | * | ||||||||
13719489-AT-AA,TA | 11563813-AT-AA,TA | * | ||||||||
13720826-CA-TT | 11565150-CA-TT | * | ||||||||
13725970-CGAAC-CGAAT,GGAAC | 11570294-CGAAC-CGAAT,GGAAC | * | ||||||||
13726023-CTGGAATGGAA-T,TTGGAATGGAA | 11570347-CTGGAATGGAA-T,TTGGAATGGAA | * | ||||||||
13726355-CAA-GAA,GAC | 11570679-CAA-GAA,GAC | * | ||||||||
13850547-CATGGAATGGA-C,CATGGAATGGC | 11729841-CATGGAATGGA-C,CATGGAATGGC | 7×ATGGA | * | |||||||
22253943-T-C | 20092057-T-C | DYZ19 | * | |||||||
22457534-TGTGTC-AGTGGT | 20295648-TGTGTC-AGTGGT | DYZ19 | * | |||||||
22457560-AGG-GGA | 20295674-AGG-GGA | DYZ19 | * | |||||||
28793003-CAT-AAG | 26646856-CAT-AAG | * | ||||||||
28793486-TAATGGAATGGAATGGAATGGAATGGAAT-GAATGGAATGGAATGGAATGGAATGGAAC,TAATGTAATGGAATGGAATGGAATGGAAT | 26647339-TAATGGAATGGAATGGAATGGAATGGAAT-GAATGGAATGGAATGGAATGGAATGGAAC,TAATGTAATGGAATGGAATGGAATGGAAT | 7×AATGG | * | |||||||
28793555-CAAAT-GAAAC | 26647408-CAAAT-GAAAC | * | ||||||||
28794071-AA-CT | 26647924-AA-CT | * | ||||||||
28795410-GGCA-AGGG | 26649263-GGCA-AGGG | * | ||||||||
28797186-TAAG-GAAT | 26651039-TAAG-GAAT | * | ||||||||
28797371-ATC-GTA | 26651224-ATC-GTA | * | ||||||||
28799770-AAGGA-CAGGC | 26653623-AAGGA-CAGGC | * | ||||||||
28803998-GG-TT | 26657851-GG-TT | * | ||||||||
28804032-CAGAGTGG-TAGAGTGC | 26657885-CAGAGTGG-TAGAGTGC | * | ||||||||
28805301-TCGG-ACGC | 26659154-TCGG-ACGC | * | ||||||||
28805796-CGT-TGG,TGT | 26659649-CGT-TGG,TGT | * | ||||||||
28809773-CAGAGTGG-TAGAGTGC | 26663626-CAGAGTGG-TAGAGTGC | * | ||||||||
28813876-TCGG-ACGC | 26667729-TCGG-ACGC | * | ||||||||
28817559-TAT-GAG,GAT | 26671412-TAT-GAG,GAT | * | ||||||||
19879-AG-GC | * | |||||||||
56849999-GGTTA-TGTCT | * | |||||||||
56867470-TATA-AATA,AATG | * | |||||||||
56870780-CA-CG,TG | * | |||||||||
13449164-G-ATCCCACTCCT | 11293488-G-ATCCCACTCCT | * | ||||||||
56836191-CTTCG-CTTTG,TTTCA | * | |||||||||
56857067-AAAAAAAT-A,AAAT | * | |||||||||
27389579-G-A | 25243432-G-A | P1_g3 | * | |||||||
56835849-CACTCCATTCCAATCCGTGCCAC-ACTCCATTCCAATCCATGCCAC,ACTCCATTCCAATCCATGTCAA | * | |||||||||
6533787-G-A | 6665746-G-A | * | ||||||||
6547179-C-A | 6679138-C-A | * | ||||||||
6584055-TAACTC-T | 6716014-TAACTC-T | * | ||||||||
7664475-T-G | 7796434-T-G | Y | * | |||||||
7664481-T-G | 7796440-T-G | Y | * | |||||||
13446325-GCT-ACA,GCA | 11290649-GCT-ACA,GCA | * | ||||||||
20428171-A-C | 18266285-A-C | P5_Dst | * | |||||||
20428181-C-A | 18266295-C-A | P5_Dst | * | |||||||
20428186-CTGG-ATGT | 18266300-CTGG-ATGT | P5_Dst | * | |||||||
22322371-C-T | 20160485-C-T | DYZ19 | * | |||||||
22323223-C-T | 20161337-C-T | DYZ19 | * | |||||||
22323625-A-C | 20161739-A-C | DYZ19 | * | |||||||
22323958-G-C | 20162072-G-C | DYZ19 | * | |||||||
22331275-T-A | 20169389-T-A | DYZ19 | * | |||||||
22343230-T-A | 20181344-T-A | DYZ19 | * | |||||||
22343238-C-T | 20181352-C-T | DYZ19 | * | |||||||
22355674-C-G | 20193788-C-G | DYZ19 | * | |||||||
22360966-AA-AC,CA | 20199080-AA-AC,CA | DYZ19 | * | |||||||
22481818-ACG-CCT | 20319932-ACG-CCT | DYZ19 | * | |||||||
22485112-AGAG-TGAC | 20323226-AGAG-TGAC | DYZ19 | * | |||||||
22493488-A-G | 20331602-A-G | DYZ19 | * | |||||||
22493499-T-C | 20331613-T-C | DYZ19 | * | |||||||
22497817-T-G | 20335931-T-G | DYZ19 | * | |||||||
24063605-G-C | 21917458-G-C | P3_b1 | * | |||||||
24693941-G-A | 22547794-G-A | P3_b2 | * | |||||||
25311029-C-T | 23164882-C-T | P2_r1 | * | |||||||
25378117-G-A | 23231970-G-A | P2_r2 | * | |||||||
25419806-CT-C | 23273659-CT-C | P2_r2 | 16×T | * | ||||||
25730924-G-C | 23584777-G-C | P1_b3 | * | |||||||
26477536-C-T | 24331389-C-T | P1_Y1 | * | |||||||
26572829-C-T | 24426682-C-T | P1_g2 | * | |||||||
26819062-G-A | 24672915-G-A | P1_g2 | * | |||||||
26842075-TA-T | 24695928-TA-T | P1_r3 | 17×A | * | ||||||
26947102-C-T | 24800955-C-T | P1_r3 | * | |||||||
27003352-G-A | 24857205-G-A | P1_r4 | * | |||||||
27483061-C-T | 25336914-C-T | P1_Y2 | * | |||||||
27489479-A-G | 25343332-A-G | P1_Y2 | * | |||||||
28231450-C-G | 26085303-C-G | P1_b4 | * | |||||||
28582605-T-A,C | 26436458-T-A,C | * | ||||||||
28587895-CCC-TCT | 26441748-CCC-TCT | * | ||||||||
56827528-TTTCCTTTCCATTCCA-T,TTTCCATTCCATTCCA | * | |||||||||
56827548-TTTCCAT-ATGCGAG,ATTCCAT | * | |||||||||
56830541-GC-AT | * | |||||||||
56834249-GTTCCATTCCATTCCATTCC-ATTCCGTTCCATTCCATTCCATTCT | 4×TTCCA | * | ||||||||
56836993-TTCCATTC-CTG | * | |||||||||
56848710-CAT-CAC,GAC | * | |||||||||
56852256-CA-ACC | * | |||||||||
56852449-CA-TG | * | |||||||||
56852959-TGACA-AGACA,AGACG | * | |||||||||
56854117-CA-ACC,CC | * | |||||||||
56856114-AAAA-AG,G | * | |||||||||
56861289-TTTTTTTTTT-ATATTTATTTTTT,ATTTTTATTTTTTA | * | |||||||||
56866560-TG-GG,GT | * | |||||||||
56869653-TCACA-CCATG,TCACG | * | |||||||||
56878564-TAATT-T,TAATC | * | |||||||||
56880908-GAGA-TAGG | * | |||||||||
13453840-CTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAT-CTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAA,TTCCACTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAT | 11298164-CTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAT-CTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAA,TTCCACTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAT | 10×TCCAT | * | |||||||
13486612-AGGT-GGGA,GGGT | 11330936-AGGT-GGGA,GGGT | * | ||||||||
56831681-GACTCCACTCAACTCC-CACTCCACTCAACTCC,CATTCCCCTCCTCTCA | * | |||||||||
56834434-ACTCCATTCCATTCCCT-ACTCCATTCCATTCCCTTCCAC,CTTCCATTCCATTCCCT | * | |||||||||
56834779-GCA-CCA,GCG | 4×CATTC | * | ||||||||
19377331-G-A | 17265451-G-A | ** | ** | |||||||
13329224-G-T | 11173548-G-T | ** | ||||||||
24672342-C-G | 22526195-C-G | P3_b2 | ** | |||||||
58859945-C-T | 56730926-G-A | ** | *** | |||||||
18227549-G-GT | 16115669-G-GT | 14×T | ** | *** | ||||||
5786608-C-CAAAAAAAAAAAAA | 5918567-C-CAAAAAAAAAAAAA | 20×A | ** | |||||||
19937284-G-GCCCCCCC | 17825404-G-GCCCCCCC | P5_Prx | 13×C | ** | ||||||
26310632-C-CTTTT | 24164485-C-CTTTT | P1_Y1 | 28×T | ** | ||||||
58845839-CATTCGAGTCCATTCG-C | 56745015-TTCGAATGGACTCGAA-T | ** | ||||||||
58823338-TTC-ATT | 56767531-GAA-AAT | ** | ||||||||
22266272-G-C | 20104386-G-C | DYZ19 | ** | |||||||
22252915-T-G | 20091029-T-G | DYZ19 | ** | |||||||
17275757-AA-GG | 15163877-AA-GG | ** | ||||||||
13139814-G-T | 10629300-G-T | ** | ||||||||
22337705-A-G | 20175819-A-G | DYZ19 | ** | |||||||
2783726-CAAACAAAC-AAAAAAAAA | 2915685-CAAACAAAC-AAAAAAAAA | ** | ||||||||
10868553-T-A | ** | |||||||||
10692062-C-A | ** | |||||||||
10916335-A-G | ** | |||||||||
10936224-C-T | ** | |||||||||
10917966-C-G | ** | |||||||||
10982820-A-C | ** | |||||||||
10936882-C-T | ** | |||||||||
10936894-C-T | ** | |||||||||
18892211-A-AT | 16780331-A-AT | ** | ||||||||
22353430-GAA-TAG | 20191544-GAA-TAG | DYZ19 | ** | |||||||
10793969-T-C | ** | |||||||||
10957767-N-A | ** | |||||||||
11660375-N-T | ** | |||||||||
10922487-N-T | ** | |||||||||
4700-T-G | FGC80356 | ** | ||||||||
36719-A-G | ** | |||||||||
4726-A-G | FGC77664 | ** | ||||||||
10764197-TG-CT | ** | |||||||||
10764214-CTCCACA-TTGCACT | ** | |||||||||
10821681-TCAT-ACAC | ** | |||||||||
10994207-TT-CG | ** | |||||||||
22295936-AC-GT | 20134050-AC-GT | DYZ19 | ** | |||||||
10754266-T-G | ** | |||||||||
10997421-A-G | ** | |||||||||
10834089-TTCACA-GTCCCC | ** | |||||||||
10834102-AAG-CAA | ** | |||||||||
10942651-ACATTCCACTT-CAGTTAAACTC | ** | |||||||||
10629312-CTACTCC-ACATTAA | ** | |||||||||
10655805-CGACAG-GAGAT | ** | |||||||||
10668043-CAATTC-A | ** | |||||||||
10692261-AAAC-CAAA | ** | |||||||||
10693698-CC-AA | ** | |||||||||
10693710-GTTGCA-TTTCCG | ** | |||||||||
10744418-CCATT-ACATG | ** | |||||||||
10746845-T-C | ** | |||||||||
10748289-TTCC-CTCT | ** | |||||||||
10748308-TG-AC | ** | |||||||||
10749944-TCCAA-ACCAT | ** | |||||||||
10754280-TA-CC | ** | |||||||||
10754648-TCCAC-CCCAG | ** | |||||||||
10755023-GTTCCG-TTTCTC | ** | |||||||||
10763851-G-A | ** | |||||||||
10769195-C-T | ** | |||||||||
10782700-GCTC-ACTT | ** | |||||||||
10793951-CACC-TGCT | ** | |||||||||
10793993-CTA-TTC | ** | |||||||||
10795020-ATGA-GTGT | ** | |||||||||
10795028-GTA-ATC | ** | |||||||||
10807361-TTTCCAC-ATTTCCCT | ** | |||||||||
10834132-ACATT-TCATG | ** | |||||||||
10836461-CTCC-TTCG | ** | |||||||||
10859559-C-T | ** | |||||||||
10866327-CACA-TACG | ** | |||||||||
10879393-C-A | FT435241 | ** | ||||||||
10911616-A-T | ** | |||||||||
10927427-TA-CG | ** | |||||||||
10928711-C-A | ** | |||||||||
10928720-A-T | ** | |||||||||
10930792-A-C | ** | |||||||||
10994189-TCATTCTATA-CCACTCCATT | ** | |||||||||
13545351-AGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAG-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA | 11389675-AGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAG-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA | ** | ||||||||
11654632-T-C | ** | |||||||||
12371755-A-G | ** | |||||||||
20826389-CTTTCTTTC-TTTTTTTTT | 18664503-CTTTCTTTC-TTTTTTTTT | P4_Gap | ** | |||||||
26386507-GAAAAAC-AAAAAAA | 24240360-GAAAAAC-AAAAAAA | P1_Y1 | ** | |||||||
56704748-C-A | ** | |||||||||
14982-T-G | ** | |||||||||
36730-C-T | ** | |||||||||
10801762-TAT-AAC | ** | |||||||||
10908390-CA-TG | ** | |||||||||
20526874-T-C | 18364988-T-C | P5_Dst | ** | |||||||
20692965-CAAAAA-C | 18531079-CAAAAA-C | P4_Prx | 19×A | ** | ||||||
22236702-G-A | 20074816-G-A | DYZ19 | ** | |||||||
22330071-T-TA | 20168185-T-TA | DYZ19 | ** | |||||||
27701027-C-T | 25554880-C-T | P1_Y2 | ** | |||||||
22435749-A-AT | 20273863-A-AT | DYZ19 | *** | |||||||
25705290-A-T | 23559143-A-T | P1_b3 | 18×CT | *** | ||||||
13867986-T-G,TAATGG | 11747280-T-G,TAATGG | 10×AATGG | *** | |||||||
22257039-A-G | 20095153-A-G | DYZ19 | *** | |||||||
3570961-C-A | 3702920-C-A | *** | ||||||||
10018309-A-T | 10180700-A-T | *** | ||||||||
58857351-A-G | 56733520-T-C | *** | ||||||||
22017853-T-G | 19855967-T-G | *** | ||||||||
7646416-T-A | 7778375-T-A | 14×A | *** | |||||||
22757115-A-G | 20595229-A-G | FGC24512 | *** | |||||||
6617327-A-G | 6749286-A-G | *** | ||||||||
22344851-C-G | 20182965-C-G | DYZ19 | *** | |||||||
22344856-A-T | 20182970-A-T | DYZ19 | *** | |||||||
22266205-C-G | 20104319-C-G | DYZ19 | *** | |||||||
22344854-A-C | 20182968-A-C | DYZ19 | *** | |||||||
58843625-G-A | 56747246-C-T | *** | ||||||||
4275246-G-A | 4407205-G-A | *** | ||||||||
4275251-T-A | 4407210-T-A | *** | ||||||||
9202147-C-A | 9364538-C-A | *** | ||||||||
9939130-A-G | 10101521-A-G | *** | ||||||||
10052600-G-T | 10214991-G-T | *** | ||||||||
10091214-A-G | 10253605-A-G | *** | ||||||||
10091216-G-C | 10253607-G-C | *** | ||||||||
10091249-C-T | 10253640-C-T | *** | ||||||||
13129723-C-G | 10619209-C-G | *** | ||||||||
13258279-C-A | 11102603-C-A | *** | *** | |||||||
13374277-G-C | 11218601-G-C | 13×A | *** | |||||||
13580857-C-T | 11425181-C-T | *** | ||||||||
13730234-C-G | 11574558-C-G | *** | ||||||||
13742683-C-G | 11587007-C-G | *** | *** | |||||||
14109889-C-T | 11989183-C-T | *** | ||||||||
14109993-C-T | 11989287-C-T | *** | ||||||||
14258574-C-A | 12137868-C-A | *** | ||||||||
14258626-G-A | 12137920-G-A | *** | ||||||||
14258636-A-C | 12137930-A-C | *** | ||||||||
14787830-T-A | 12675901-T-A | *** | ||||||||
15884958-A-C | 13773078-A-C | *** | ||||||||
16784423-G-A | 14672543-G-A | *** | ||||||||
17196569-G-A | 15084689-G-A | *** | ||||||||
19029161-G-A | 16917281-G-A | *** | ||||||||
20655106-C-T | 18493220-C-T | P4_Prx | *** | |||||||
22231993-A-T | 20070107-A-T | DYZ19 | *** | |||||||
22232165-C-A | 20070279-C-A | DYZ19 | *** | |||||||
22232168-A-T | 20070282-A-T | DYZ19 | *** | |||||||
22232190-G-T | 20070304-G-T | DYZ19 | *** | |||||||
22232192-G-T | 20070306-G-T | DYZ19 | *** | |||||||
22232196-T-A | 20070310-T-A | DYZ19 | *** | |||||||
22234913-C-G | 20073027-C-G | DYZ19 | *** | |||||||
22235064-A-C | 20073178-A-C | DYZ19 | *** | |||||||
22252638-C-T | 20090752-C-T | DYZ19 | *** | |||||||
22289810-T-A | 20127924-T-A | DYZ19 | *** | |||||||
22293063-A-C | 20131177-A-C | DYZ19 | *** | |||||||
22329991-T-A | 20168105-T-A | DYZ19 | *** | |||||||
22337669-C-G | 20175783-C-G | DYZ19 | *** | |||||||
22342921-T-A | 20181035-T-A | DYZ19 | *** | |||||||
22360260-G-T | 20198374-G-T | DYZ19 | *** | |||||||
22361234-C-A | 20199348-C-A | DYZ19 | *** | |||||||
22361375-G-T | 20199489-G-T | DYZ19 | *** | |||||||
22365649-G-A | 20203763-G-A | DYZ19 | *** | |||||||
22365691-C-A | 20203805-C-A | DYZ19 | *** | |||||||
22366658-G-T | 20204772-G-T | DYZ19 | *** | |||||||
22366688-G-T | 20204802-G-T | DYZ19 | *** | |||||||
22366714-A-T | 20204828-A-T | DYZ19 | *** | |||||||
22366768-C-G | 20204882-C-G | DYZ19 | *** | |||||||
22421847-T-C | 20259961-T-C | DYZ19 | *** | |||||||
22450150-G-T | 20288264-G-T | DYZ19 | *** | |||||||
22481631-A-G | 20319745-A-G | DYZ19 | *** | |||||||
22481674-T-A | 20319788-T-A | DYZ19 | *** | |||||||
22495731-G-A | 20333845-G-A | DYZ19 | *** | |||||||
22496043-C-A | 20334157-C-A | DYZ19 | *** | |||||||
22496212-A-G | 20334326-A-G | DYZ19 | *** | |||||||
22499499-C-T | 20337613-C-T | DYZ19 | *** | |||||||
22504592-G-C | 20342706-G-C | DYZ19 | *** | |||||||
22757065-A-T | 20595179-A-T | *** | ||||||||
22757104-A-G | 20595218-A-G | *** | ||||||||
24207616-C-A | 22061469-C-A | P3_b1 | *** | |||||||
25268596-G-A | 23122449-G-A | P2_r1 | *** | |||||||
25656546-G-T | 23510399-G-T | P1_b3 | *** | |||||||
25736792-C-A | 23590645-C-A | P1_b3 | *** | |||||||
26483733-T-C | 24337586-T-C | P1_Y1 | *** | |||||||
27077100-A-T | 24930953-A-T | P1_r4 | *** | |||||||
27078013-G-C | 24931866-G-C | P1_r4 | 24×AC | *** | ||||||
27902189-C-T | 25756042-C-T | P1_Y2 | *** | |||||||
27902197-C-T | 25756050-C-T | P1_Y2 | 34×T | *** | ||||||
27905021-C-T | 25758874-C-T | P1_Y2 | *** | |||||||
58823172-C-T | 56767699-G-A | *** | ||||||||
58831551-T-C | 56759320-A-G | *** | ||||||||
58831563-T-A | 56759308-A-T | *** | ||||||||
58831571-C-A | 56759300-G-T | *** | ||||||||
58840431-G-A | 56750440-C-T | *** | ||||||||
58841320-C-T | 56749551-G-A | *** | ||||||||
58843537-T-G | 56747334-A-C | *** | ||||||||
58843539-T-C | 56747332-A-G | *** | ||||||||
58843619-C-G | 56747252-G-C | *** | ||||||||
58843621-T-A | 56747250-A-T | *** | ||||||||
58843622-T-G | 56747249-A-C | *** | ||||||||
58843631-T-A | 56747240-A-T | *** | ||||||||
58843684-A-G | 56747187-T-C | *** | ||||||||
58846255-G-C | 56744616-C-G | *** | ||||||||
58846705-G-C | 56744166-C-G | *** | ||||||||
58858642-C-A | 56732229-G-T | *** | ||||||||
58861589-G-T | 56729282-C-A | *** | ||||||||
58864124-T-G | 56726747-A-C | *** | ||||||||
58867576-C-G | 56723295-G-C | *** | ||||||||
58870015-T-A | 56720856-A-T | *** | ||||||||
58873281-G-A | 56717590-C-T | *** | ||||||||
58875220-T-G | 56715651-A-C | *** | ||||||||
58898514-G-A | 56692357-C-T | *** | ||||||||
58898602-T-G | 56692269-A-C | *** | ||||||||
58907346-G-A | 56683525-C-T | *** | ||||||||
58908656-C-A | 56682215-G-T | *** | ||||||||
58913139-G-A | 56677732-C-T | *** | ||||||||
58913294-G-A | 56677577-C-T | *** | ||||||||
22480585-TTTGAA-T | 20318699-TTTGAA-T | DYZ19 | *** | |||||||
13203965-GA-G | 11048289-GA-G | *** | ||||||||
13203943-TGA-GGT | 11048267-TGA-GGT | *** | ||||||||
9962120-AT-GG | 10124511-AT-GG | *** | ||||||||
19183814-C-CTTT | 17071934-C-CTTT | 28×T | *** | |||||||
28794963-CT-C | 26648816-CT-C | *** | ||||||||
58844026-A-ATC | 56746843-A-AAG | *** | ||||||||
13469931-TGAC-CGCA | 11314255-TGAC-CGCA | *** | ||||||||
2685644-C-CTTTTTT | 2817603-C-CTTTTTT | 20×T | *** | |||||||
4269771-C-CTTTTT | 4401730-C-CTTTTT | 24×T | *** | |||||||
4848574-G-GTTTTTTT | 4980533-G-GTTTTTTT | 29×T | *** | |||||||
6089764-G-GTTTTT | 6221723-G-GTTTTT | 31×T | *** | |||||||
7032333-A-ATTTTT | 7164292-A-ATTTTT | 22×T | *** | |||||||
8125067-AAG-A | 8257026-AAG-A | *** | ||||||||
9732895-C-CAAAAAA | 9895286-C-CAAAAAA | IR3_Prx | 20×A | *** | ||||||
13140073-CGAGTGCGTGTGATTCCATT-C | 10629559-CGAGTGCGTGTGATTCCATT-C | *** | ||||||||
13203955-CATCATT-GACAATA | 11048279-CATCATT-GACAATA | *** | ||||||||
13267597-C-CAAAAAAAAAA | 11111921-C-CAAAAAAAAAA | 11×A | *** | |||||||
13468959-TTAGA-CTGTG | 11313283-TTAGA-CTGTG | *** | ||||||||
13482911-ATTC-GTTA | 11327235-ATTC-GTTA | *** | ||||||||
13483759-TGACT-AGATA | 11328083-TGACT-AGATA | *** | ||||||||
13485452-GGAGATA-AGAAATC | 11329776-GGAGATA-AGAAATC | *** | ||||||||
13485479-AG-TC | 11329803-AG-TC | *** | ||||||||
14025566-G-GAA | 11904860-G-GAA | *** | ||||||||
14258632-A-AT | 12137926-A-AT | *** | ||||||||
14562321-C-CTTTT | 12450522-C-CTTTTT | 42×T | *** | |||||||
15336019-C-CAAAAAAA | 13224137-C-CAAAAAAA | 30×A | *** | |||||||
15340383-C-CTTTTT | 13228501-C-CTTTT | 18×T | *** | |||||||
15884888-CA-GG | 13773008-CA-GG | *** | ||||||||
16344401-C-CTTCTTA | 14232521-C-CTTCTTA | *** | ||||||||
16344411-T-TTCTTCA | 14232531-T-TTCTTCA | *** | ||||||||
18447621-G-GGTTTTTTTTTTT | 16335741-G-GGTTTTTTTTTTT | P6_Dst | 18×T | *** | ||||||
18688500-C-CAAAAA | 16576620-C-CAAAAA | 20×A | *** | |||||||
19409391-C-CAAAAA | 17297511-C-CAAAAA | 22×A | *** | |||||||
19744991-ATTTTTTTTTTT-A | 17633111-ATTTTTTTTTTT-A | P5_Prx | 23×T | *** | ||||||
20025482-T-TCCCCCCC | 17913602-T-TCCCCCCC | P5_Prx | 14×C | *** | ||||||
20332111-C-CAAAAAAAAAAAAAAAAA | 18170225-C-CAAAAAAAAAAAAAAAAA | P5_Dst | 30×A | *** | ||||||
22113187-C-CAAAAAA | 19951301-C-CAAAAAA | 23×A | *** | |||||||
22226585-GAGCT-CAGCA | 20064699-GAGCT-CAGCA | DYZ19 | *** | |||||||
22232040-CAAA-AAAT | 20070154-CAAA-AAAT | DYZ19 | *** | |||||||
22232055-ACAC-GCAT | 20070169-ACAC-GCAT | DYZ19 | *** | |||||||
22232109-TTC-GTG | 20070223-TTC-GTG | DYZ19 | *** | |||||||
22235087-AT-A | 20073201-AT-A | DYZ19 | *** | |||||||
22236464-CCCACCAAGG-ACCAGTAAGT | 20074578-CCCACCAAGG-ACCAGTAAGT | DYZ19 | *** | |||||||
22252645-TCTTCCTTTTGGC-CCTTAATTCTGGG | 20090759-TCTTCCTTTTGGC-CCTTAATTCTGGG | DYZ19 | *** | |||||||
22263795-AC-GT | 20101909-AC-GT | DYZ19 | *** | |||||||
22265842-GT-CA | 20103956-GT-CA | DYZ19 | *** | |||||||
22273539-C-CCG | 20111653-C-CCG | DYZ19 | *** | |||||||
22337200-CATGTCC-TATTTCG | 20175314-CATGTCC-TATTTCG | DYZ19 | *** | |||||||
22337241-GT-TC | 20175355-GT-TC | DYZ19 | *** | |||||||
22360381-GTTTT-CTTTG | 20198495-GTTTT-CTTTG | DYZ19 | *** | |||||||
22365977-GGTGG-TGTCA | 20204091-GGTGG-TGTCA | DYZ19 | *** | |||||||
22366697-TTT-AAG | 20204811-TTT-AAG | DYZ19 | *** | |||||||
22366714-ACT-TCG | 20204828-ACT-TCG | DYZ19 | *** | |||||||
22366755-AGAGA-GGAGT | 20204869-AGAGA-GGAGT | DYZ19 | *** | |||||||
22421783-GC-CT | 20259897-GC-CT | DYZ19 | *** | |||||||
22421840-TT-AG | 20259954-TT-AG | DYZ19 | *** | |||||||
22496054-AGTGT-TGTGA | 20334168-AGTGT-TGTGA | DYZ19 | *** | |||||||
22496169-TTTTG-CTTAC | 20334283-TTTTG-CTTAC | DYZ19 | *** | |||||||
23037237-A-ATTTT | 20875351-A-ATTTT | 20×T | *** | |||||||
23801733-C-CAAAAAAA | 21639847-C-CAAAAAAA | 31×A | *** | |||||||
24388083-T-TAA | 22241936-T-TAA | *** | ||||||||
25444404-CTATTTC-TTTTTTT | 23298257-CTATTTC-TTTTTTT | P2_r2 | *** | |||||||
25656575-TG-AA | 23510428-TG-AA | P1_b3 | *** | |||||||
26228689-C-CTTTT | 24082542-C-CTTTT | P1_Y1 | 27×T | *** | ||||||
28253491-C-CAAAAAAAAA | 26107344-C-CAAAAAAAAA | P1_b4 | 32×A | *** | ||||||
28454731-A-AT | 26308584-A-AT | P1_gr2 | 10×T | *** | ||||||
28539174-C-CAAAAAA | 26393027-C-CAAAAAA | 20×A | *** | |||||||
28545880-CAAAAAA-C | 26399733-CAAAAAA-C | 20×A | *** | |||||||
58843639-CCAGCCC-GGAGTCA | 56747226-GGGCTGG-TGACTCC | *** | ||||||||
58843651-ATTCCATTCCATT-TTTCGACACCCAG | 56747208-AATGGAATGGAAT-CTGGGTGTCGAAA | *** | ||||||||
58843694-GCATTC-TTTTTG | 56747172-GAATGC-CAAAAA | *** | ||||||||
58844015-TATTCACTTCCATTTCC-T | 56746835-CGAATGGAAATGGAAGT-C | *** | ||||||||
58868388-AGTGCATTCCATTCCGTGGCT-A | 56722460-GACAGCCACGGAATGGAATGC-G | *** | ||||||||
58885276-TATTTTATTCCATGCC-T | 56705575-CAAATGGCATGGAATA-C | *** | ||||||||
58908600-GTTC-CATT | 56682268-GAAC-AATG | *** | ||||||||
58972565-T-TATTCC | 56826418-T-TATTCC | *** | ||||||||
21021632-CT-C | 18859746-CT-C | P4_Dst | 17×T | *** | ||||||
58862994-GATTTG-CATTAT | 56727872-CAAATC-ATAATG | *** | ||||||||
13485854-CCG-TCA | 11330178-CCG-TCA | *** | ||||||||
58995119-AGGCA-GGGCG | 56848972-AGGCA-GGGCG | *** | ||||||||
18688521-C-AAA | 16576641-C-AAA | *** | ||||||||
58840410-CCATTCCATTCGATTTAG-ACATTCGATTCGATTCGA | 56750444-CTAAATCGAATGGAATGG-TCGAATCGAATCGAATGT | *** | ||||||||
58843671-TTTCCGTTTCA-ATTCAATGATT | 56747190-TGAAACGGAAA-AATCATTGAAT | *** | ||||||||
13463948-TTCCCCC-CTCACCCAAAA | 11308272-TTCCCCC-CTCACCCAAAA | *** | ||||||||
58840455-CGA-TGT | 56750414-TCG-ACA | *** | ||||||||
13203970-CCACCCCGCCTC-TAAT | 11048294-CCACCCCGCCTC-TAAT | *** | ||||||||
22268297-GTGACC-TTGAGT | 20106411-GTGACC-TTGAGT | DYZ19 | *** | |||||||
58840445-CCA-GCATTTT | 56750424-TGG-AAAATGC | *** | ||||||||
13482969-TA-CC | 11327293-TA-CC | *** | ||||||||
28797878-GAGTG-AAATT | 26651731-GAGTG-AAATT | *** | ||||||||
22257030-CCACG-GCATT | 20095144-CCACG-GCATT | DYZ19 | *** | |||||||
58840395-CCGTTC-TCATT | 56750471-GAACGG-AATGA | *** | ||||||||
22263840-CAT-TCC | 20101954-CAT-TCC | DYZ19 | *** | |||||||
58823284-TCTCAT-A | 56767582-ATGAGA-T | *** | ||||||||
58828536-C-G | 56762335-G-C | *** | ||||||||
13262792-CGCC-TGCT | 11107116-CGCC-TGCT | *** | ||||||||
13263697-CGTC-TGTT | 11108021-CGTC-TGTT | *** | ||||||||
13474008-CGTA-GGTT | 11318332-CGTA-GGTT | *** | ||||||||
9416727-CTTTG-TTTTT | 9579118-CTTTG-TTTTT | *** | ||||||||
22503758-C-G | 20341872-C-G | DYZ19 | *** | |||||||
22342783-A-C | 20180897-A-C | DYZ19 | *** | |||||||
13437785-A-T | 11282109-A-T | *** | ||||||||
10030599-TAGC-AAGT | 10192990-TAGC-AAGT | *** | ||||||||
26433572-C-T | 24287425-C-T | P1_Y1 | 19×T | *** | ||||||
3174374-C-T | 3306333-C-T | 18×T | *** | |||||||
5403266-C-T | 5535225-C-T | 15×T | *** | |||||||
5493431-C-T | 5625390-C-T | Y60653 | 24×T | *** | ||||||
13256619-G-C | 11100943-G-C | *** | ||||||||
13324015-G-A | 11168339-G-A | *** | ||||||||
13354609-C-A | 11198933-C-A | *** | ||||||||
13437719-G-A | 11282043-G-A | *** | ||||||||
13502954-G-T | 11347278-G-T | *** | ||||||||
13503073-G-A | 11347397-G-A | *** | ||||||||
16656658-C-T | 14544778-C-T | 14×T | *** | |||||||
59032481-A-C | 56886334-A-C | *** | ||||||||
25706148-CA-C | 23560001-CA-C | P1_b3 | 16×A | *** | ||||||
13557556-AC-GT | 11401880-AC-GT | *** | ||||||||
22321030-A-C | 20159144-A-C | DYZ19 | *** | |||||||
10047828-A-C | 10210219-A-C | *** | ||||||||
22328388-A-G | 20166502-A-G | DYZ19 | *** | |||||||
22235011-C-T | 20073125-C-T | DYZ19 | *** | |||||||
9911320-GCA-CCT | 10073711-GCA-CCT | *** | ||||||||
25571253-GA-G | 23425106-GA-G | P1_gr1 | 13×A | *** | ||||||
58853491-CTCC-TTCA | 56737377-GGAG-TGAA | *** | ||||||||
22337713-T-A | 20175827-T-A | DYZ19 | *** | |||||||
58824569-CATTCCAATAG-C | 56766285-ATGGAATCTAT-A | *** | ||||||||
13266042-CACA-TACG | 11110366-CACA-TACG | *** | ||||||||
58885447-A-T | 56705424-T-A | *** | ||||||||
13531506-AA-G | 11375830-AA-G | *** | ||||||||
20021496-TTATATA-T | 17909616-TTATATA-T | P5_Prx | 15×TA | *** | ||||||
58841130-C-T | 56749741-G-A | *** | ||||||||
9965278-AGCAC-GGCAT | 10127669-AGCAC-GGCAT | *** | ||||||||
13471841-CTGGG-TGGGT | 11316165-CTGGG-TGGGT | *** | ||||||||
58843384-TGATG-GAATT | 56747483-CATCA-AATTC | *** | ||||||||
13570555-AGAC-TGAT | 11414879-AGAC-TGAT | *** | ||||||||
13516360-TG-CA | 11360684-TG-CA | *** | ||||||||
9952663-AG-CA | 10115054-AG-CA | *** | ||||||||
22227933-C-A | 20066047-C-A | DYZ19 | *** | |||||||
59017917-TCG-GCT | 56871770-TCG-GCT | *** | ||||||||
22314594-G-A | 20152708-G-A | DYZ19 | *** | |||||||
28178294-T-G | 26032147-T-G | FGC61364 | P1_b4 | *** | ||||||
22503694-GAAT-AAAG | 20341808-GAAT-AAAG | DYZ19 | *** | |||||||
11030778-A-C | *** | |||||||||
20850693-GTA-G | 18688807-GTA-G | P4_Dst | 12×TA | *** | ||||||
10827110-A-G | *** | |||||||||
10844239-A-T | *** | |||||||||
11675236-T-G | *** | |||||||||
10917917-G-C | *** | |||||||||
10917946-C-A | *** | |||||||||
10917955-T-G | *** | |||||||||
11023149-T-G | *** | |||||||||
10911642-T-C | *** | |||||||||
10766534-T-C | *** | |||||||||
10766544-T-C | *** | |||||||||
10869944-T-C | *** | |||||||||
10836477-T-G | *** | |||||||||
11035773-C-A | *** | |||||||||
10667996-G-T | *** | |||||||||
24016986-C-T | 21870839-C-T | 15×T | *** | |||||||
10844667-T-C | *** | |||||||||
10773729-C-A | *** | |||||||||
13398261-G-A | 11242585-G-A | *** | ||||||||
20249276-CA-C | 18087390-CA-C | P5_Dst | 22×A | *** | ||||||
10629636-C-A | *** | |||||||||
10758791-C-T | *** | |||||||||
58823473-G-T | 56767398-C-A | *** | ||||||||
10668001-C-A | *** | |||||||||
10894201-C-A | *** | |||||||||
27080520-G-T | 24934373-G-T | P1_r4 | 16×T | *** | ||||||
10629330-T-C | *** | |||||||||
13259717-AG-GT | 11104041-AG-GT | *** | ||||||||
56863028-GT-CC | *** | |||||||||
10807068-TA-CT | *** | |||||||||
10972955-CTCT-TTCC | *** | |||||||||
10982945-CCTCGCT-TC | *** | |||||||||
13514810-CC-GT | 11359134-CC-GT | *** | ||||||||
13465852-C-T | 11310176-C-T | *** | ||||||||
13563786-G-T | 11408110-G-T | *** | ||||||||
25738886-CTAA-C | 23592739-CTAA-C | P1_b3 | *** | |||||||
22367414-T-A | 20205528-T-A | DYZ19 | *** | |||||||
13545748-CA-C | 11390072-CA-C | *** | ||||||||
13465868-G-T | 11310192-G-T | *** | ||||||||
16137122-C-T | 14025242-C-T | P8_Dst | *** | |||||||
26812667-AT-A | 24666520-AT-A | P1_g2 | 16×T | *** | ||||||
10784966-C-A | *** | |||||||||
10987194-T-G | *** | |||||||||
13569835-TA-T | 11414159-TA-T | 11×A | *** | |||||||
10927236-TCC-GCA | *** | |||||||||
11022872-TT-CA | *** | |||||||||
9958318-GGGAAT-CGAAAC | 10120709-GGGAAT-CGAAAC | *** | ||||||||
11015964-AGTA-CATC | *** | |||||||||
10763332-TTTCCA-GTTCTAT | *** | |||||||||
11013909-AC-GA | *** | |||||||||
11013918-TAC-CAG | *** | |||||||||
11013943-CA-TG | *** | |||||||||
13472484-TG-CA | 11316808-TG-CA | *** | ||||||||
9931519-CTT-TTG | 10093910-CTT-TTG | *** | ||||||||
9934957-CTTGA-TTTGT | 10097348-CTTGA-TTTGT | *** | ||||||||
9946088-CT-GA | 10108479-CT-GA | *** | ||||||||
9952642-TCGAGG-CCAAGC | 10115033-TCGAGG-CCAAGC | *** | ||||||||
10061716-CTC-AT | 10224107-CTC-AT | *** | ||||||||
10658500-GTCA-CTCT | *** | |||||||||
10670891-C-T | *** | |||||||||
10672241-TTCCT-CTCCA | *** | |||||||||
10676946-TATTACGG-AACTACAC,TATTACGC | *** | |||||||||
10683323-ATTTCTTTCGAC-CTATCCTTCTAC,CTATCTTTTGAA | *** | |||||||||
10689140-GT-AA | *** | |||||||||
10748018-TTCC-GTCT | *** | |||||||||
10758814-TACTT-CACTC | *** | |||||||||
10760349-GTACTC-CCACTT,GCACTC | *** | |||||||||
10763273-TTC-CTA | *** | |||||||||
10773716-TTTCC-ATTCG | *** | |||||||||
10790985-ATTC-CTTT | *** | |||||||||
10803523-C-T | *** | |||||||||
10813041-CT-AA | *** | |||||||||
10826872-AC-TT | *** | |||||||||
10826907-TT-AC | *** | |||||||||
10836749-A-T | *** | |||||||||
10851057-CTC-ACC,TTA | *** | |||||||||
10851997-CC-AA | *** | |||||||||
10869962-CATC-TACT | *** | |||||||||
10877044-ACTC-GCTG | *** | |||||||||
10880693-AAT-CAC | *** | |||||||||
10880700-T-A | *** | |||||||||
10880727-CC-TA | *** | |||||||||
10884578-ACTGCA-CCTTCT | *** | |||||||||
10884589-CT-AA | *** | |||||||||
10892802-TTC-CTT | *** | |||||||||
10894190-C-T | *** | |||||||||
10894207-A-T | *** | |||||||||
10899063-TCCAT-ACCAC | *** | |||||||||
10906093-CTTG-TC | *** | |||||||||
10952213-TCCAT-ACCAC | *** | |||||||||
10952237-C-CTGAAT | *** | |||||||||
10952256-ACTAC-TTTTAACTGA | *** | |||||||||
10959530-AC-TCTCCAT | *** | |||||||||
10964544-C-A | *** | |||||||||
10972920-CTA-ATC | *** | |||||||||
10980670-GCACAA-ACAAAG | *** | |||||||||
10983275-C-G | *** | |||||||||
10984499-TGA-AGG | *** | |||||||||
10994686-CTCCA-GTCCT | *** | |||||||||
10999996-CTA-ATC | *** | |||||||||
11018868-ATTA-TTTC | *** | |||||||||
11025088-AAC-CAT | *** | |||||||||
11025434-AAT-CGG | *** | |||||||||
11035584-TACTCGACTCC-CACTAG | *** | |||||||||
13404867-TATATAC-CATGTAA | 11249191-TATATAC-CATGTAA | *** | ||||||||
13433622-TTTTCTCTCTTTCTCTCTT-CTTTCTCTCTCTATCTCCC | 11277946-TTTTCTCTCTTTCTCTCTT-CTTTCTCTCTCTATCTCCC | *** | ||||||||
13442553-TT-CC | 11286877-TT-CC | *** | ||||||||
13445374-AAAAGAAGAAAAAAGA-GAAGAAGAAAAAAGG | 11289698-AAAAGAAGAAAAAAGA-GAAGAAGAAAAAAGG | *** | ||||||||
13468361-GCAGA-ACAGG | 11312685-GCAGA-ACAGG | *** | ||||||||
13480242-TGTAC-GGAAG | 11324566-TGTAC-GGAAG | *** | ||||||||
13485669-GATA-TAGT | 11329993-GATA-TAGT | *** | ||||||||
13485685-CCCCCTGT-TGCCCTGG | 11330009-CCCCCTGT-TGCCCTGG | *** | ||||||||
13690724-AATGA-TATGG | 11535048-AATGA-TATGG | *** | ||||||||
13700510-AGCTCC-GGCTCG | 11544834-AGCTCC-GGCTCG | *** | ||||||||
15752635-TCTC-CCTT | 13640755-TCTC-CCTT | *** | ||||||||
16435936-GTAA-TTAAT | 14324056-GTAA-TTAAT | *** | ||||||||
21620499-ATACTATACTATACTATACTATACTATACTATACTATACTATACTATACTATACT-ATACTATACTATACTATACTATACTATACTATACTATACTATACTATACTATACC,GTACTATACTATACTATACTATACTATACTATACTATACTATACTATACTATACT | 19458613-ATACTATACTATACTATACTATACTATACTATACTATACTATACTATACTATACT-ATACTATACTATACTATACTATACTATACTATACTATACTATACTATACTATACC,GTACTATACTATACTATACTATACTATACTATACTATACTATACTATACTATACT | *** | ||||||||
22341315-T-A | 20179429-T-A | DYZ19 | *** | |||||||
24485675-C-TT | 22339528-C-TT | 15×T | *** | |||||||
28709251-CC-TA | 26563104-CC-TA | *** | ||||||||
28793660-TA-GG | 26647513-TA-GG | *** | ||||||||
28799782-AGAACGGA-TGAAAGGC | 26653635-AGAACGGA-TGAAAGGC | *** | ||||||||
28802953-CAAAT-GAAAC | 26656806-CAAAT-GAAAC | *** | ||||||||
28805108-TT-GG | 26658961-TT-GG | *** | ||||||||
28812813-AAACG-GAAC | 26666666-AAACG-GAAC | *** | ||||||||
28813720-GGTCGAT-AGTGGAG | 26667573-GGTCGAT-AGTGGAG | *** | ||||||||
56730318-A-T | *** | |||||||||
36407-G-T | *** | |||||||||
7664487-T-G | 7796446-T-G | *** | ||||||||
9911351-GCAAG-CCAAT | 10073742-GCAAG-CCAAT | *** | ||||||||
9964214-AA-TG | 10126605-AA-TG | *** | ||||||||
10780565-TCTC-CCTG | *** | |||||||||
16136933-T-C | 14025053-T-C | P8_Dst | *** | |||||||
19751585-CCAG-ACAT | 17639705-CCAG-ACAT | P5_Prx | *** | |||||||
19751593-G-T | 17639713-G-T | P5_Prx | *** | |||||||
19751603-T-G | 17639723-T-G | P5_Prx | *** | |||||||
20460428-ATT-A | 18298542-ATT-A | P5_Dst | 17×T | *** | ||||||
22245746-G-A | 20083860-G-A | DYZ19 | *** | |||||||
22293346-T-C | 20131460-T-C | DYZ19 | *** | |||||||
22493340-T-A | 20331454-T-A | DYZ19 | *** | |||||||
22503940-A-C | 20342054-A-C | DYZ19 | *** | |||||||
23109873-C-T | 20947987-C-T | *** | ||||||||
23218634-G-A | 21056748-G-A | *** | ||||||||
25614551-A-G | 23468404-A-G | P1_gr1 | *** | |||||||
25833864-CA-C | 23687717-CA-C | P1_b3 | 15×A | *** | ||||||
26469280-A-C | 24323133-A-C | P1_Y1 | *** | |||||||
26478948-G-C | 24332801-G-C | P1_Y1 | *** | |||||||
26697546-CT-C | 24551399-CT-C | P1_g2 | 12×T | *** | ||||||
26832059-CT-C | 24685912-CT-C | P1_g2 | 14×T | *** | ||||||
27061668-AT-A | 24915521-AT-A | P1_r4 | 17×T | *** | ||||||
27120309-CT-C | 24974162-CT-C | P1_r4 | 17×T | *** | ||||||
27429623-A-C | 25283476-A-C | P1_g3 | *** | |||||||
27483513-G-A | 25337366-G-A | P1_Y2 | *** | |||||||
27484908-G-A | 25338761-G-A | P1_Y2 | *** | |||||||
27519347-G-A | 25373200-G-A | P1_Y2 | *** | |||||||
27665773-TA-T,TAA | 25519626-TA-T,TAA | P1_Y2 | 17×A | *** | ||||||
27924442-GT-G | 25778295-GT-G | P1_Y2 | 12×T | *** | ||||||
28384225-TA-T | 26238078-TA-T | P1_gr2 | 13×A | *** | ||||||
56826836-CCATTCCATTCGATTCCATTCCATTCAATTCC-AG | *** | |||||||||
10658485-ATC-TTG | *** | |||||||||
10668339-GC-CA,CCACTCA | *** | |||||||||
10776554-TAC-CTA,TTC | *** | |||||||||
13486557-GGAGAT-AGAGAC,AGTGAT | 11330881-GGAGAT-AGAGAC,AGTGAT | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Mutation Notes:
Kit | POSITION-REF-ALT (hg19) | POSITION-REF-ALT (hg38) | Note |
---|---|---|---|
P9UH4 | 6861230-TTTTC-T | 6993189-TTTTC-T | I removed this mutation from my data. It would appear that I have 6861230-T-TTTTC instead. |
P9UH4 | 20040482-GGCAAGCAC-G | 17928602-GGCAAGCAC-G | Checked my BAM file. It looks like half of my reads at this location have the deletion. This location is opposite to 20089217-TTGCTTGCG-T. |
Manual | 19675596-G-C | 17563716-G-C | 21C 23G |
Manual | 19739340-A-AAAC | 17627460-A-AAAC | 33 reads cover the insertion. 18 have the insertion and 15 do not. |
Manual | 19842176-CAATAAATAAATA-C | 17730296-CAATAAATAAATA-C | 72 reads derived for the deletion and 33 reads ancestral. |
Manual | 26179746-AAAC-A | 24033599-AAAC-A | 115 reads cover the deletion. 61 do not show the deletion and 54 show the deletion. |
Manual | 22453058-C-A | 20291172-C-A | Checked BAM file. I have 537 reads which cover this point. 150 of them are A, another 376 are C, 3 are G and 8 are T. Without looking at paired end reads, I can't see any way to figure out the true location. |
Manual | 19600395-GGT-G | 17488515-GGT-G | STR on P5. 1 read with 17 copies of GT, 23 reads with 16 copies of GT, 35 reads with 15 copies of GT, 14 reads with 14 copies of GT and one read with just 13 copies of GT. |
Manual | 23761608-A-AAAG | 21599722-A-AAAG | About 13 reads cover the insertion. 10 of them are positive, 3 are negative. Note that there is an A>C SNP near the end of this STR. |
Manual | 23311147-T-TTTTC | 21149261-T-TTTTC | This is an STR where the reference sequence has 15 copies of TTTC. Because of the short reads of my FGC test, it's difficult to align properly. About a dozen reads however to indicate I am positive for this insertion. |
Manual | 19346433-C-CCTTTCTTTCTTT | 17234553-C-CCTTTCTTTCTTT | Checked my BAM file on 20141117. |
Manual | 17662167-GTAGATAGATAGA-G | 15550287-GTAGATAGATAGA-G | This is an STR. The hg19 reference sequence has 16 copies of TAGA. My FGC BAM file has 1 read with 14 copies, 17 reads with 13 copies and 3 reads with 12 copies. |
Manual | 14981830-TTTCCTTCC-T | 12869906-T-. | This is an STR. There are about 10 reads with the deletion and maybe one or two that have a slightly different count. |
Manual | 6861230-T-TTTTC | 6993189-T-TTTTC | I have checked my BAM file, and I have about a half dozen reads supporting the claim that this in an insertion of TTTC. Oddly, my report from FGC indicates a deletion. This INDEL corresponds to DYS570, so I know what my value should be. I removed the deletion mutation from my FGC data. |
Manual | 16809474-G-GAGAT | 14697594-G-GAGAT | About 10 reads, 9 of them show the insertion. |
Manual | 6347814-G-GAGAA | 6479773-G-GAGAA | All 26 reads which cover the insertion are positive. |
Manual | 19973015-C-T | 17861135-C-T | There are 38C and 46T. This SNP is in P5. This is a ZZ SNP as there are no distinguishing positions anywhere near, at least +/- 400bp. |
Manual | 20089217-TTGCTTGCG-T | 17977337-TTGCTTGCG-T | Checked my BAM file. It looks like half of my reads at this location have the deletion. This location is opposite to 20040482-GGCAAGCAC-G. |
Manual | 22260454-G-A | 20098568-G-A | Hundreds of reads. With a couple filters to remove some misaligned reads, I still have about 490 A and 678 G. |
Manual | 22285004-C-T | 20123118-C-T | Some reads clearly belong elsewhere. Of the reads which fit here, 376 are C, 217 are T. |
Manual | 24899333-C-T | 22753186-C-T | Looks like about half of the reads in the BAM file have the mutation. |
Manual | 24939079-C-T | 22792932-C-T | 67 C, 46 T. |
Manual | 26121103-C-T | 23974956-C-T | 1A 36C 31T. The A read and one of the T reads is misaligned. |
Manual | 4847052-T-G | 4979011-T-G | 2T 3G |
Manual | 16110097-A-T | 13998217-A-T | 35A 40T |
Manual | 20007955-A-G | 17896075-A-G | 17A 20G |
Manual | 19970773-A-G | 17858893-A-G | 27A 26G |
Manual | 22298978-G-T | 20137092-G-T | 946G 431T |
Manual | 10907035-A-C | 6C | |
Manual | 20551642-A-C | 18389756-A-C | 36A 18C |
Manual | 19628136-T-G | 17516256-T-G | 37T 12G |
Manual | 6274770-G-A | 6406729-G-A | 73A 1C 82G |
Manual | 9595600-C-T | 9757991-C-T | 1A 67C 65T |
Manual | 20738728-G-T | 18576842-G-T | 57G 64T |
Manual | 20905447-C-A | 18743561-C-A | 34C 60A |